>input_sequence_38438
--------------------------------------------------------------------------------
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-------------------------------------------ATGGCCGCGGCACCACATCACCTGCTCTATGAATTCG
CCAAGGCTGCACTCATCAAGATATTTGCATTTCCTTATGCCACGGTCTGTTGTACGCTCCTCTCTTTCATGATACCCAAT
TCGTTCCGGTTAGTGAACAACTGAGCAACAGAAACTTGATGCTGGCTTGCTTTTGCCCGTTGTAAAATGTTGCAGGTCTG
CGACATGTACTGCAACGGTGGAGCTGATACAGAAAAGTGGGCTGATGCCCAAGCTGGTCGCTACATAGGAATTGGTAGGC
CGACTCACTATAACCTGAGCCCCTACTTGTTTTCTTTGTTCAGAGTACCTGAA-TCTTTTGCTTATAGTGAACTTACTGC
TTTCTGTGAT-AGATGCTTCTGCGTCAGCTGTCAGTAGTGACGACCGTGAACTGTGGGAGAACAAATGGAAACCTTTCAC
CACTGAGTTCATCGAGTTGAATCCTTCTGCTGTAATCTCCTTTGCCCCACCCCTGCTTACTTGCATGAAATTG-AAGTGT
TCAGTGCTGATGGCATGTATTGTGGTCTGTATAACAGGATGACTTTGAAGCTCGGTTGCAAGAAAAGGGCATCCAAGCAG
ATATAGTTTGCTGCATGCAGAATTTACAGGCAAGTTGAGTTTTCTCCACCTCCGGAATATGGCATACTGTTAAGCTTTGC
TAATCTTCAAAGTTTATCCATGTTGAAAGATAGTTATGCTTTGAAAGTGAGGAGCACGCAAAGAAGCTTCTCAATAATGT
ATCATCATTGCTCAAACCTGGAGGCTATTTCTTTGGCATAATTCCTGATTCATCTACAATATGGTATGGCCCCTCATACC
ATATATTCTCCAAT--TTAAAGATTAGTTACCACCTAATCTTTAATATATAT--TCTCCTATTTCAAATTTAGTTTGAAC
ACCACTATTCTGATTCTTTGTGAGCTTAACGGCATTTTAATTTTGTAGGACTAAATATCAAAAGAATGTTGAGGCTTCAC
ATAATAAGGGTCTGAAGGTTGTTCCAAATAGCATCCGCTCTGACAACTATACAATTACCTTCGAAATCGAGGAAGAAAAG
TATGAGCTCAACTTCTGTATCTATGTACGTCTGAATAGGTTTGCTATCTTGAGGTTGAGGCATTACATCCAAATGGTGCA
GGTTTCCCTTCTTCGGAAAGAAGTACCAACTCAAATTTGCAAATGAAGCGATGTTTGAGAATCATTGCCTAGTCCACTTT
CCCAGCCTTATGAGGTTACCATTTTCTCATTCATTTCCAACATTTTGTTGTAGTCTTCCGTTCATGTAAACCAACAACTT
GAATCACAAGGTTTTCACAATATTATAATATGTTGGAACAGATTAGCAAGGGAGGCTGGACTTGAATATGTGGAGATCCA
GAACTTGACTGAGTTTTATGATGACAACAGGTGCCCGTATCTTATTGAACGCCTGTGTTATTTTCATGAAGTCATTTAAT
GCATAATGATTCATAGTAAAATTTATTTGTATAAGTTACTTTAATTTTGTCTCCTCTTTTCCACAGAAATGTAATGTGAT
TA-TACTACACTAATGAATGGTGGGCATATCTGATGGTTTATTTTGGTTCTGACTGACTTCCAGAACACAGTTTGCTCCA
ATGCTTGGTAGTTGTGGTGCCAATTTGGTTGACCCTCGTGGAAAGCTCATTGCTCGTTCCTATGATATTTTAGGTGCTGT
ACCCTTTTCCTGCATTGGGTTCATTCAAATATTCCAATTCGCTCAGTGCTTAATCTGATTTGTGCAGGCCTGTATTCGAC
TTTTGTATTCCAGAAGCCTGACCCAGATGCAATACCACCTGCTGTAACACCTGACCCAGATGAAGAGGTCTGCTCTTCCT
TGCCAAACAGCACTAGATTTTTGTTTACTGTTTCAGTGGTGACTATTAGTTAACCCCTGATTGAAACAGCAGGAGCGGCT
CTGGAGGCAGCAGGCGGCAGCGGATGATTTGAGGCGCCCACAGGGAGAGGTGATGCCAATAGACCCTGATCAGAAAGGGA
TCCTGGGCCCAGGACCTGCAGATATGAGGCTTAATTAG------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------
>chr2D_1_TraesCS2D01G372100
TCTCATGAAAGCACAACCGTGCCTCTCGCGGAAGCAAAACCGTGCCTCTCGCGGAAGGAAAAAAAATCAGAAAACGCGTT
TTTTTATTTCCGTTTCTGAGAGGCACGGCCGTGACTCTTGCGAAAGCACAACCGTGCCTCTCTCGAAAGCAAAACCGTGC
CTTTCGCGGAAGGAAAAAAACAGAAAACACGTTTTTTTCGTTTCTGAGAGGCACGGCCGTGACTCTTGCGAGAGGAGAAG
AAAAGAAAACGCGTTTTTTCGTGAAGTTTTCTTTTTGATTTTTTTATCCTAAAGTTCAGGAAGACCGGTGAAAAACCGAT
ACATCAAAAAAAACTTATTTAAAAAACTGAAAAGACGTGCTGAAAAATAAAAAAAACGAAATCTGAAGAGAGCGTCTAGA
GCGCGACACGTGGCGGGCGGCTGGGAGCGCGCAAGTGGCGTTGATCGTCACGTGAGGCTAGCAGGCCGCGTGGAGCAAAG
CGGGCTCTGTCCCGCGGCTCAACAACTCGCTCTGGCCTGCTGTGGCCTA-ATGGAGTGTAGTCCGTGGCTCGTTGTTTGG
CCCAGTTGCGAGAATCATATCGAGAGCGTCGTCTTCAGCAGCCACTCGCCGTTCTTGTCCGCCGCCGGAGCGTCTGTACG
CGCCGCCGGAGAGCCCGGGCACGTTCCCTAGGCGCGGGTACGATAACACCCAAAGCCC--CTCTCCACGGCTTCTTCTCC
GCCGTCCCATACCGGCGCGGTACCGTCGGCGCTCGGTGCGCTACCTCTCCGCATCGCCGGCTGCGCGGTTTCGGCTCAAC
CCCATCGCGTCCCTGCTGCCTCGACCCCGTCCGCAGTTCTCGTGATTGGTTTCTAAGGTAGGAGCACCTTCTTCATCCAT
GATTTGTTAAACCCCGCTGAACCTCGAGAAATTTCGAGCGTGCACCGGCACGCCGTCTAGATCCGCCCCTGAATCCCCAA
CCATCGTCTACATGTTTATCCGCAGCTGCAGCAGAGACAGTGCATGGCCGCGGCACCACATCACCTGCTCTATGAATTCG
CCAAGGCTGCACTCATCAAGATATTTGCATTTCCTTATGCCACGGTCTGTTGTACGCTCCTCTCTTTCATGATACCCAAT
TCGTTCCGGTTAGTGAACAACTGAGCAACAGAAACTTGATGCTGGCTTGCTTTTGCCCGTTGTAAAATGTTGCAGGTCTG
CGACATGTACTGCAACGGTGGAGCTGATACAGAAAAGTGGGCTGATGCCCAAGCTGGTCGCTACATAGGAATTGGTAGGC
CGACTCACTATAACCTGAGCCCCTACTTGTTTTCTTTGTTCAGAGTACCTGAA-TCTTTTGCTTATAGTGAACTTACTGC
TTTCTGTGAT-AGATGCTTCTGCGTCAGCTGTCAGTAGTGACGACCGTGAACTGTGGGAGAACAAATGGAAACCTTTCAC
CACTGAGTTCATCGAGTTGAATCCTTCTGCTGTAATCTCCTTTGCCCCACCCCTGCTTACTTGCATGAAATTG-AAGTGT
TCAGTGCTGATGGCATGTATTGTGGTCTGTATAACAGGATGACTTTGAAGCTCGGTTGCAAGAAAAGGGCATCCAAGCAG
ATATAGTTTGCTGCATGCAGAATTTACAGGCAAGTTGAGTTTTCTCCACCTCCGGAATATGGCATACTGTTAAGCTTTGC
TAATCTTCAAAGTTTATCCATGTTGAAAGATAGTTATGCTTTGAAAGTGAGGAGCACGCAAAGAAGCTTCTCAATAATGT
ATCATCATTGCTCAAACCTGGAGGCTATTTCTTTGGCATAATTCCTGATTCATCTACAATATGGTATGGCCCCTCATACC
ATATATTCTCCAAT--TTAAAGATTAGTTACCACCTAATCTTTAATATATAT--TCTCCTATTTCAAATTTAGTTTGAAC
ACCACTATTCTGATTCTTTGTGAGCTTAACGGCATTTTAATTTTGTAGGACTAAATATCAAAAGAATGTTGAGGCTTCAC
ATAATAAGGGTCTGAAGGTTGTTCCAAATAGCATCCGCTCTGACAACTATACAATTACCTTCGAAATCGAGGAAGAAAAG
TATGAGCTCAACTTCTGTATCTATGTACGTCTGAATAGGTTTGCTATCTTGAGGTTGAGGCATTACATCCAAATGGTGCA
GGTTTCCCTTCTTCGGAAAGAAGTACCAACTCAAATTTGCAAATGAAGCGATGTTTGAGAATCATTGCCTAGTCCACTTT
CCCAGCCTTATGAGGTTACCATTTTCTCATTCATTTCCAACATTTTGTTGTAGTCTTCCGTTCATGTAAACCAACAACTT
GAATCACAAGGTTTTCACAATATTATAATATGTTGGAACAGATTAGCAAGGGAGGCTGGACTTGAATATGTGGAGATCCA
GAACTTGACTGAGTTTTATGATGACAACAGGTGCCCGTATCTTATTGAACGCCTGTGTTATTTTCATGAAGTCATTTAAT
GCATAATGATTCATAGTAAAATTTATTTGTATAAGTTACTTTAATTTTGTCTCCTCTTTTCCACAGAAATGTAATGTGAT
TA-TACTACACTAATGAATGGTGGGCATATCTGATGGTTTATTTTGGTTCTGACTGACTTCCAGAACACAGTTTGCTCCA
ATGCTTGGTAGTTGTGGTGCCAATTTGGTTGACCCTCGTGGAAAGCTCATTGCTCGTTCCTATGATATTTTAGGTGCTGT
ACCCTTTTCCTGCATTGGGTTCATTCAAATATTCCAATTCGCTCAGTGCTTAATCTGATTTGTGCAGGCCTGTATTCGAC
TTTTGTATTCCAGAAGCCTGACCCAGATGCAATACCACCTGCTGTAACACCTGACCCAGATGAAGAGGTCTGCTCTTCCT
TGCCAAACAGCACTAGATTTTTGTTTACTGTTTCAGTGGTGACTATTAGTTAACCCCTGATTGAAACAGCAGGAGCGGCT
CTGGAGGCAGCAGGCGGCAGCGGATGATTTGAGGCGCCCACAGGGAGAGGTGATGCCAATAGACCCTGATCAGAAAGGGA
TCCTGGGCCCAGGACCTGCAGATATGAGGCTTAATTAGTTTGTCAG-AAAACTCAGATGTAGATATAGGCTTGGGGGTAA
TTGTGCTCCCTCAGTTGATGGTGCATGGCCATGCTTGTGACCTCCCCTGTGTCGCTAGTTGATCTGAAGCTCATGTCAAA
AGGGAAAAAGGTTGAGCTGAAGCTCACGCTGGTG-------GCTGATGCAAGTTTGGGCATTCATTGATGTCCACCAGGC
CAATTTCCATGTGTGCTGTCATCACCAGTAGTCTAATTTCAAGTCATGTTGCATTA-GGTCCTAACTAGTAGTACAAGGT
ATTTTGTGTGTGTGTGTAGAGGTACACTTAAGTTGCGTGCTTTGTATAACATGGCTTTTCAGAATTTTGTGGTAGTGTGA
CCGTGAAAGACTATCTTTC-------------------------------------------------------------
------------AGATGATACAACTATTGGTGAAAACAGTTTTTAATCAATTGACGGCAGCATGACATGGATGCACG-GA
CAAACTAGCAAGAGTTATACCAGCTGATTACACAGAGTGGGAATATGATAATGCTGTTGCCAGCATCATTGATACCAA--
----------------------------CCACCTATTGTGGAATCAATCTACCAATGGCCAATTAAACTAGGGCGACGCT
ACATGTCTGCCGGTGGATTAATTGAAAACATCCGCCGCCTCCTACGTTGTTGGATGGAGCCACAAATAGTCATCGGATCT
CCCCCAATGAAATGCGTCGTCAATTGCAACAAGGTAGATGTTCCACATAGATAATGTCAATTGCAACAAGGTAGATGTTC
C------------------------------------------------ACATAGATAATGTCGCGGGAGGACTTTAGCA
ACATAGGTGGTGTTGCAGTTTTTTTTGC--CTTCGTAGTTTTTGCAGCATAGATGACGTTGCGGGAGGACTTTTGCAACA
TGAATAAATGGTGCAATTTTTTTTTGCGCGATGTCG-------TCTGTGGTGTGAATCGAGAAATTTCTGCAACAGAGAT
GATGTTGCGTGGAACGACTTTTGCAACAAGGCCCTTGTTGCGGAAAGTAT--AAAAAGCATCATCGGCCGGAGCGACGAC
GAATAGCGAG
>chr2B_447
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------GTCACGCGAGGCTAGCAGGCTACGTGGAGCAAAG
CGGGCTCTGTCCTGCGGCTCAACAACTCCCTCTGGCCTGCTGCGGCCCAGATGGAGTCTAGTCCGTGGCTCGTTGGTTGG
CCCAGTTGCGAGAATCACATCGAGAGCGTCGTCTTCAGCAGCCCCTCGCCGTTCTTGCCCGCCGCCGGAGCTTCTGTACG
CGCCGCCGGAGAGCCCGGGCGCGTCCCCTAGGCGCGGGTACGATAACACCCAAAGTCC--CTA--CACGGCTTCTTCTCC
GCCGCCCCATACCGGCGCGGTACCGTCGGCGCTCGGTGCGCTACCTCTCCGCATCGCTGGCACCGCCGTTTCCGTCCAAC
CCCATCGCATCCCTGCTGCCTCGACCCCGTCCGCAGTTTTGTTGATTGGTTTCTAAGGTATGAGCACTTTCTTCATCCAT
GATTTGTTAAACCCCGCTGAACCTCGAGAAATTTTGAGCGTGCACCGGCACGCCGTCTAGATCCGCCCTTGAACCCCCAA
CCATCGTCTACGTGTTTATCTGCAGCTGCAGCAGAGACAGTGCATGGCGGCGGCGCCACATCACCTGCTGTATGAATTCG
CGAAGGCTGCACTCATCAAGATATTTGCATTTCCTTATGCCACGGTCTGTTCTACGCTCCTCTCTTTTCCGATATCCAAT
TCGTTCTGGTTAGCGAAGAACTGAGCAGCAGAAACCTGATGCTGGCTTGCTTTTACCCGTTGGGAAATGTTGAAGGTCTG
CGACATGTACTGCAACGGCGGAGCTGATACAGAAAAGTGGGCTGATGCCCAAGCTGGTCGCTACATAGGAATTGGTAGGT
CGACTCACTATAACCTGAGCCCCTACTTGGTTACTTTGTTCAGAGTACATGAAATCTTTTGCCTATAGTGAACTCATTGC
TTTCCGTGAT-AGACGCTTCTGCGTCGGCTGTCAGTAGTGACGACCGTGAACTGTGGGAGAACAAATGGAAACCTTTCAC
CACTGAGTTCATCGAGTTGAATCCTTCCGCTGTAATCTCCTCTCCCCCACCCCTTCTTACTTGCACGAAATTTAAAGTCT
TAAGAGCTGATGGCATGTATGGTGGTCTCTATGACAGGATGACTTTGAAGCTCAGTTGCAAGAAAAGGGCATCCAAGCAG
ATATAGTTTGCTGCATGCAGAATTTACAGGCAAGTTGGGTTTTCTCCACCTCCGGAATATGGCATACTGTTAAGCTTTGC
TAATCTTCAAAGTTTATCCATGTTGAAAGATAGTTATGCTTTGAAAGTGAGGAACACGCAAAGAAGCTTCTCAATAACGT
GTCATCATTGCTCAAACCTGGAGGCTATTTCTTTGGCATAATTCCTGATTCATCTACATTATGGTATGGCCCCTCATACC
ATATATTCTTCAATATTTAAAGATTAGTTACCATCTAATCTTTAATATATAT--TCTCCAATATCAAATTTAGTTTGAAC
ACCACTATTCTGGATCTTTGTGAGCTTAACGGCATTTTGATGTTGTAGGACTAAATATCAAAAGAATGTTGAGGCTTCAC
ATAATAAGGGTCTGAAGGTTGTTCCAAATAGCATCCGCTCTGACAACTATACAATTACCTTCGAAATCGAGGAAGAAAAG
TATGAGCTCAACTTCTGTATCTATTTACATTCGAAAAGGTTTTCTATCTTTAGGTTCATGCATTACATCCAAATGGTGCA
GGTTTCCCTTCTTCGGAAAGAAGTACCAACTCAAATTTGCAAATGAAGCAATGTTTGAGAATCATTGCCTCGTTCACTTT
CCCAGCCTTATGAGGTTACAATTTTCTCATTCATTTCCAACATTTTGCTGTAGTCTTCCGTTCATGTAAACCAACAACTT
GGGTCACAAGGTTTTCACAATATTATAATATGTTGGAGCAGATTAGCAAGGGAGGCTGGACTTGAATATGTGGAGATCCA
GAACTTAACTGAGTTTTATGATGACAACAGGTGCCCGTATCTTATTGAACGCCTATGTTATTCCCATGAAGTCATTTAAT
ACATAATGCGTCATAGTAAAATTTATTTGCATAAGTTACTTAAATTTTC-CTCCTCTTTTCCAAAGAAATGTAATGTGAT
TA-TAT---ACTAATCAATGGTGGATATATCTGATGGTTTATTTTGGTTCTGACTGACTTCCAGAACTCAGTTTGCTCCA
ATGCTTGGTAGTTGTGGTGCCAATTTGGTTGACCCTCGTGGAAAGCTCATTGCTCGTTCCTATGATATTTTAGGTGATGT
ACCCTTTTCCTGCATTGGGTTCATCCAAATATTCCAATTCGCTCAGTGCTTAATCTGATTTGTGCAGGCCTGTATTCGAC
TTTTGTGTTCCAGAAGCCTGATCCAGATGCAATACCACCTGTTGTAACACCTGACCCAGATGAAGAGGTCTGCTCTTCCT
TGCCAAGCAGCACTAGATTTTTGTTTACTGTTTCAGTGGTGAGTATTAGTTAACCCCTGATTGAAACAGCAGGAGAGGCT
CTGGAGGCAGCAGGCGGCAGCGGATGATTTGAGACGGCCACAGGCAGAGGTGATGCCAATAGACCCTGATCAGAAAGGGA
TCCTGGGCCCAGGACCTGCAGATATGAGGCTTAATTAGTTTGCCAG-AAAATTCAGATGTAGATATAGACTT-GGGGTAA
TTCTGCTCTCTCAGTTGATGGTGCATGGCCATGCTTGTGACCTCCCCTGTGTCGCTAGTTGATCTGAAGCTCATGTCAAA
AGGGAAAAAGGTTGATCTGAAGCTCACGCGGGTG-------GTTGATGCAAGTTTGGGCATTCGTTGAAGTCCACCAGGC
CAATTTCCATGTGTGCTGTCATCACCAGTAGTCTA-TTTCAAGTCATGTTGCATTA-GGTCCTAACTAGTAGTACAAGGT
ATTTTATTA-----TGTAGAGGTACACTTAAGTTGTGTGCTTTGTATAGCATGGCTTTTCAGAATTTTGTGCTAGTGTGA
CTGTGAAGGACTTATCTTTCTACTACTCCCTCTGTCCCATAATGTAATGTCAAAAAAGTCTTATATTATGGGAATTATGG
GAAGGAGGGAGTAGATGATACAACTATTGGTGAAAACAGTTTTG-ATCAATTGACTGCAGCATAACGTGGATGCACGCCA
CAATCTAGCAAGAGTTATACCAGCTGATTACACAAAG-------------------------------------------
--------------------------------------------------------------------------------
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----------
>chr2A_449
--------------------------------------------------------------------------------
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------------------------------------------------CACGCGAGGCTAGCAAGCTGCGTGGAGCAAAG
CGGGCTCTGTCCCGCGGCTCAACAATTCGCTCCGGCCTGCTGCGGCCCAGATGGACTCTAGTCCGTGACTCGTTGGTTGG
CCCAGTTGCGAGAATCATATCGAGAGCGTCGTCTTCAGCAGCCCCTCGCCGTTCTTGTCCGCCGCCGGAGCTTCTGTACG
CGCCGCCGGAGAGCCCGGGCACGTCCCCTAGGCGCGGGTACGATAACACCCAAAGCCCCTCTA--CACGGCTTCTTCGAC
GCCGTCCCATACCGGCGCGGTACCGTCGGCGCTCGGTGCGCTACCTCTCCGCATCGCCGGCACCGCCGTTTCCGCCCAAC
CCCATCGCGTCCCTGCTGCCTCGACCTCGTCCGCAGTTTTCGTGATTGGTTTCTAAGGTATGAGCACTTTCTTCATCCAT
GATTTGTTAAACCCCGCTGAACCTCGAGAAATTTTCAGCGTGCGCCGGCACGCCGTCCAGATCCGCCCCTGAATTCCCTA
CCATCGTCTGCGTGTTTATCCGCAGCTGCAGCAGAGGCGGTGCATGGCGGCGGCACCACATCACCTGCTCTATGAATTCG
CCAAGGCTGCACTTATCAAGATATTTGCATTTCCTTATGCCACGGTCCGTTCTACGCTCCTCTCTTTCCCGATATCCAAT
TCGTTCCGGTTAGCCAAGAACTAGCCAGCAGAAACCTGATGCTGGCTTGCTTTTACTCGTTGTGAAATGTTGAAGGTCTG
CGACATGTACTGCAACGGCGGAGCTGATACAGAAAAGTGGGCCGATGCCCAAGCCGGTCGCTACATAGGAATTGGTAGGC
CGACTCACTATGACCCGAGCCCCTACTTGGTTACTTTGTTCAGACTACCTGA-ATCTTGTACCTATAGTGAACTTACTGC
TTTCTGTGATAAGACGCTTCTGCGTCAGCTGTCAGTAGCGACGACCGTGAACTGTGGGAGAACAAATGGAAACCTTTCAC
CACTGAGTTCATCGAGTTGAATCCTTCTGCTGTAATATCCTTT-CCCCACCCCTTCTTACTTGCACGAAATTG-AAGTCT
TAAGAGGTGATGACATATATGGTGGTCTGTATAACAGGATGACTTTGAAGCTCAGTTGCAAGAAAAGGGCATCCAAGCAG
ATATAGTTTGCTGCATGCAGAATTTACAGGCAAGTTGAGTTTTCTCCGCCTCCGGAATATGGCATACTGTTAAGCTTTGC
TAATCTTCAAAGTTTGTCCATGTTGAAAGATAGTTATGCTTTGAAAGTGAGGAACACGCAAAGAAGCTTCTCAATAACGT
ATCATCCTTGCTCAAACCTGGAGGTTATTTCTTTGGCATAATTCCTGATTCATCCACAATATGGTATGGCCCCTCATACC
ATATATTCTCCG--ATTTAAAGATTAGTTACGATCTAATCTTTAATATATATATTCTCCAATTTCAAGTTTAGTTTGAAC
ACCACTATTCTGAATCGTTGTGAGTTTAAAGGCATTTTAATTTTGTAGGACTAAATATCAAAAGAATGTTGAGGCTTCAC
ATAATAAGGGTCTGAAGGTTGTTCCAAATAGCATCCGCTCTGACAACTACACAATTACCTTCGAAATTGAGGAAGAAAAG
TATGAGCCCATCTTCTGTATCAATTTACGTTC-AAAAGGTTTTCTATCTTGAGGTTGATGCATTACATCCACATGGCGCA
GGTTTCCTTTCTTCGGAAAGAAGTACCAACTCAAATTTGCAAATGAAGCGATGGTTGAGAATCATTGCCTGGTCCACTTT
CCCAGCCTTATGAGGTTACAATTTTCTCATTCATTTCCAACATTT-GTTGTAGTCTTCCATTCATGTAAACCAACAACTT
GGGTCGCAATGTTTTCACAACATTATAATATGTTGGAGCAGATTAGCAAGGGAGGCTGGACTTGAATATGTGGAGATCCA
GAACTTAACTGAGTTTTATGATGACAACAGGTGCCCGTATCTTATTGGACGCCTATGTTATTTCCATGAAGTCATTTAAT
ACATAGTGCTTCATAGTAACATTTATTTGCATAAGTTACTTAACTTTTC-CTCCTCTTTTCGAAAGAAATGTAGTGTGAT
TACTAT---ACTAATGAATGGTGGACATATCTGATGGTTTATTTTGGTTCTGACTGACTTCCAGAACACAGTTTGCTCCA
ATGCTTGGTAGTTGTGGTGCCAATTTGGTTGACCCTCGTGGAAAGCTCATTGCTCGTTCCTATGATATTTTAGGTGGTGT
ACCCTTTTCGTGCACTGGGTTCATTCTAGTATCCCAATTCGCTCAGTGCTTAATCTGATTTGTGCAGGCCTGTATTCGAC
TTTTGTATTCCAGAAGCCTGACCCAGATGCAATACCACCCGTTGTAACACCTGACCCAGATGAAGAGGTCTGCTCTTCCT
TGCCAAACAGCACTAGATTTTTGTTTACTGTTTCAGTAGTGAGTGTTAGTTAACCCCTGATTGAAACAGCAGGAGCGGCT
CTGGAGGCAGCAGGCGGCAGCGGATGATTTGAGGCGCCCACAGTCAGAGGTGATTCCAATAGACCCTGATCAGAAAGGGA
TCCTGGGCCCAGGACCTGCAGATATGAGGCTTAATTAGTTTGCCAGAAAAATTAAGATGTAGATATAGACTT-GGGGTAA
TTCTGCTCCCTCAGTTGATGGTGCATGGTCATGCTTGTGACCTCCCCTGTGTCGCCAGCTGATCTGAAGCTCATGTCAAA
AGGGAAAAAGGTTGATCTGAAGCTCACGCGGGTGGTTGATCGTTGATGCAAGTTTGGGCATTCGTTGAAGTCCACCAGGC
CAATTTCCATGTGTGCTGTCATCACCAGTAGTCTAATTTCAAGTCATGTTGCATTATGGTCCTAACTAGTAGTACAAGGT
ATTTTTTT--TGTGTGTAGAGGTACACGTAAGTTGCGTGCTTTGTATAGCATGGCTTTTCAGAATTTGGTGGTAGTGTGA
CTGTGAAAGACTATCTTTC-------------------------------------------------------------
------------AGATGATACAACTATTGGTGAAAACAGTTTTTAATCAATTGAGTGCAGCATAGCATGGATGCACGCGA
CAAGCTAGCAAGAGTTATACCAGCTGATTACACAAAGTGGGAATATGATAATGCTGTTGCCAGCATCATTGATACCAACC
ACCTATTGTCAATTCAAAAAAAAAAAAACCACCTATTGTGGAATCAATCTACCACTAGCCAATTAAAATAGGGCGACGCT
ACATGTCCACCGGTGGATTAATTGAAAGATGTGTTA--------------------------------------------
-------------------TCAATTGCAACAAGGTAGATGTTCCATAGCTCGCTCTGCAACAGTTGCTTTGTTGCAACCA
TCAAAGCGTTATTTTCGCTTGAATTTTTTTTTGTCTTCATTTTTTTTAAACATAGATGATGCTGCGGGAGGCCTTTTGCA
ATAGAGATGGTGTTGCAGTTTTTTTTTCATCTTCATAGTTTTTGCAACATAGATGATGTTGCGGGAGGACTTTTGCAACA
TGAATAATGTTGCAGAATTTCTTTCACCGAAAAGATGATGTCATCTGTGGTGTGAATCGACAAATTTCCGCAACAGAGAT
GATGTTGCGCGGAAGGACTTTTGCAACAAGGCCCTTGTTGCGGAAAAGTATAAAAAAGCATCGTCGACTGGAGCGACGAC
G---------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------S-------------S-------------
------------------------------------------S----S---------S-----------------S----
-------------------------------------------S---------------------------S--------
------------------------S-------------------------------------SSS---------------
-------------------------------------------------------------SS---S-----S--S----
--------------------------------------S---------------------S------S------------
----------------------------------S---------------------------------------------
-----------S------------------------------------S-------------------------------
---------------------------------------------------S----------------SS----S-----
-------------S---S---------S-------S------------------S--------S--------S-------
------------------S-------------------------------------------------------------
-----------------------------S--S-----------------------------S-----------------
--------------S-----------------------------------------------------------------
-------------------------------------------S----------S----------S------------S-
-S--S---------------S--------------------------------S--------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------S-----------------------S--
--------------------------------------------------------------------------------
---------------------------------S-------------------------S--------------------
-------------S------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------S-----SS---S------S---------------S---------------------
----------------------------------------------------------------------S---------
-------------------S------------------------------------------------------------
-SS----------------------------------S------------------------------------------
------S-----------------------------------------------S--------S----------------
S-------S--------------------S-----------S------SS-------------S----------------
-----SSSS---------------S-------------------------------------------------------
----------------------------------------------------------------------------S---
--------------------------------------------------------------------------------
-----------------------------------------S--------------------------------------
------------------------------------------S-------------------------------------
--------------------------------------------S-----------------------------------
------------------------------------------S--------S----------------S---S-------
--S-----------------------------------------------------------------------------
---------------S-------------S------------S--------------------S----S-----------
--------------------------------------------------------------------------------
-----S-SSS--------------------------------------S-------------------------------
-S------------------------------------------------------------------------------
-------------------------------------------------------S-------S----------------
---S------------------------------S---------------------------------------------
------------------------------------------------------S-S----------S------------
-------SS------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSS--------------------------S-SSSSSSSSSS---SS-SSS-SSS--S-SSSSSS
S--------------------------------------------------------S---SS--------S----S---
-S-S--S-------------------S-------S-----------S---------S-----------------------
-------SSSSSSSS-S---S---SS-SSS-SSSSS------------------------S-------S-----------
---------S----S-------------------------------SSSS------------S---S-S-----------
-SSSSSSSSS
>forward_538
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------TGCTGTGGCCTAATGGAGTG----------------------
--------------------------------------------------------------------------------
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>reverse_1734
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------GCACGCAAAGAAGCTTCTCA-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------
>forward_1184
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------GCTTGCTTTTGCCCGTTGTA----------------
--------------------------------------------------------------------------------
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>reverse_3113
--------------------------------------------------------------------------------
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------------------------------------------------------------------------GGGGGTAA
TTGTGCTCCCTC--------------------------------------------------------------------
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----------
