>input_sequence_38404
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------CCGCTCCAACCAAATCTCGCCTCGGCTCCCCCCAGATCCAGCCAGCCC
GCCCGCCCGCCATGTCCTCCTCCAACCA----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------GGAGGATCACGACGAG
GACGCGCCCCTCGTCCGCGACCCGGCCGCCTCCTCCTCCTCCTCCCGCCACCACCGCCCCTCCGC---CTCCTCCTCCTC
CGCCGTCGGCGAGGTGCCCGTCTCGCAGTCGCTCATCAAGGCGGCCAGCAACGTGTGCTTCTCCTTCTTCGTGCTCGCCG
TGCTCGCCGTCACCGTCGTCGCCGTCACCTACCAGCCGCCCGACCCCTGGCTCCAGTCCTCCGCCGCCATCACCACCTCC
CTCGCCCGCGTCCTCCCCAACTCCTCCTTCCTCCTCCCCGACGACTCGCTCCTCCCCACCGGCGAGGACTTCCCCTCCCC
CTCCCCCTCCTC------------------------CGACGCCGCCGACCAGGCCCAGGCCGCCGTTCCCTCGGGCATCA
ACGCCACT------GCGGGCACCTGCGACCCGGACGCCCCGCTCAACTGCACCGACCCGCGCGTGCTCGCCGCCGTCAAG
GCCTTCAACGCCAAGGCCTTCTTCCGCAGGTCCATCGTCTTCCTCAGCTACGAGGCGCCCGTGCGCGGGCCCAAGCCCGG
CCAGTGCGACGTCGCCTGGCGCTTCCGGAACCGCCGCGAGAAGTCCTGGCGCCGCTACAGGGACTACCGCCGCTTCGAGC
TCGCCCCCGCCGACGGGTGCGCGCTCGACATCACCAAGGTCGGCAAGTTCAGGTCGGGGAAGAACGCGGCTCGCCCGCCG
CGCCCCAAGGGCCCCAAGAAGCCGCGCGTCGCGGCGCCGCCGGTGGACGCGGAGATCAACGACACGATCCCCCTCGTTGG
GTCGGAGGCGGAGTTCAGGAGAGGCAAGTACCTCTACTACATGAGAGGCGGTGACCACTGCAAGAGCATGAACCAGTTCA
TCTGGAGCTTCCTCTGCGGGCTCGGCGAGGCCAAGTTCCTCAACCGGACGTTCGTGATGGATCTGAACATGTGCTTGTCC
GGGGCTCACACAGAGGACGGCAAGGATGTGGATGGCAAGGATTTTAGGTACTATTTTGATTTCGAGCACCTCAAGGAGTC
GGTGTCTCTGGTGGAGGAAGGGGACTTCTTGAAGGACTGGCGGCGCTGGGACAAGAAGAAGGGTCCGGGCCGGATCTCGG
TGCGGAAGGTGCCCACATACAAGGTGACACCAATGCAGCTGAAGAGGGACAAGAGCAACATCATTTGGAGGCAGTTTAAT
GGGCATGAGCCTGAGAACTACTGGTACAGGGTCTGCGAGGGGCGAGCTGCCAAGGTCATCCAGAGGCCTTGGTATGCTAT
TTGGAAGTCCAAGAGGCTGATGAACATTGTGACTGAGATCGCAGGCAGGATGGATTGGGACTACGATGGTTTGCATGTGG
TCCGAGGGTGGAAGGCAATGAACAAGAAGATGTATCCGAACTTGGACGCGGACACATCACCCGACGCGATCGTAGATAAG
GTGACCAAGCTTATCAAGCCGTGGCGGAACCTCTACATCGCAACCAATGAGCCATTCTACAACTACTTCGACAAGCTCAG
GTCACACTACCATGTGCATTTGCTTGATGATTATAAGGAGCTTTGGTCGAATACGAGCGAGTGGTACAACGAGACGACAG
CGATCAATAATGGGAAGGACTTGCCGTTCGATGCGTACATGAAGGTGATTGTGGACACTGAGGTATTCTACAGATCAAAG
GCAAAGGTTGAAACGTTTAACAACCTGACGAGAGATTGCAAAGATGGAATCAACACGTGCAATTTGTGACACATGAGTTC
ATGGTGTGATAATTATCGGTGTCCATATACTCTCTACTGGCTGGCGCAATGGAACTCGGGCGGACTTCATCCAGGGTTTG
TCATATTAGGCATAATATCTTGATGTCGCTTGT----CATAGCATGCTCAGTTGATTGCATTACATGTGCATCTAAATTA
TGTGCCCTCCATTCTTTTTGTATAATTTACCACTGTGCTCAAACCTGCAAAATCCAAAATAGTAACACTCAGTGAGCATT
TTGCAGTGCCTCTA------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------
>chr2A_1_TraesCS2A01G154600
TGGTGGCTGATCTAAGGTCGGTCGGGGTAACACTTTTGCCTTTGGACTTAAAAAGGGATGTTTGATCAAGGCGATGGCAC
CCGCCTCAAGAAATGTCTATGGTCGCTACGATTAGTAGACGAGGAAGCCTACAATGGGGTGAAAATGAAACACACTACAA
GAAGAGCCTGTGAGTAGCAAAATGGGAAAGAATGGTGCCGGAGGCAACTACTCGGTGAAATTGAAGTAGATGACGGGACA
ACAGGACATGTGGGGGACACGACAAACATGCCACAGACGCCGGAGTGGCCGTTCGGAATCGAGTGAAGGTATCACCCAGC
TTCAGCTTCGAGAAAGAAAGAATGGAAG---GAAAAAACAACACTTCGGAAGGATTTGAAATGTTTGATTAAATTTAGGT
CATGCATCTCAAAAGAAGCCAGAAGAATCACAGTGTTTTTTACTCTTTCCGTCCTAAAATATAAGATATTTTTTTATACT
ATCAGGATATAAAAAAACGTCTTACATTCCGGGACGAAGGGAGTAGATTTTTATTTAGAATGTACTCCCTCCGTTCTAAA
ATAGATGACCCAACTTTGTACTAGGAGTATATGTCTTGTGTTCCCAACCATCTTACTTCTTGTCCCGTCTTGCTTACTCT
GTACACCGTCGACGTGCACTCCTCTCTCCTTCCTCGCCGGTGAACTCGTCGCCGTGCACGGTGGTGAGGACGGGAAGA--
-------------------------------------TGATCGACGCGTCTACACCCACCTCTCGGCG---AGAGCAGGG
AAAACGACTGACCAGCGCCGTGCGTGCGTGCGTGTGCGATCTCCTTTCTCCCTCCCGAAAAACGCAAAGCGCGATCTTTC
TTCCCCCTAAAAG------ATTACTCCGGCGCCGACACACACCACGCAACGCAAAGGAAGGAAGGAAGACAGCCGAGCAC
GACAGTGCCACCCCACCGCACTCCCCTCTTTCTCTCC---CCTACTCCACCTGCAACATCCCATCCCCATTCCCA-----
-------CCACTCCCACTC------CCCGTCCCCGCTCCAACCAAATCTCGCCTCGGCTCCCCCCAGATCCAGCCAGCCC
GCCCGCCCGCCATGTCCTCCTCCAACCA----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------GGAGGATCACGACGAG
GACGCGCCCCTCGTCCGCGACCCGGCCGCCTCCTCCTCCTCCTCCCGCCACCACCGCCCCTCCGC---CTCCTCCTCCTC
CGCCGTCGGCGAGGTGCCCGTCTCGCAGTCGCTCATCAAGGCGGCCAGCAACGTGTGCTTCTCCTTCTTCGTGCTCGCCG
TGCTCGCCGTCACCGTCGTCGCCGTCACCTACCAGCCGCCCGACCCCTGGCTCCAGTCCTCCGCCGCCATCACCACCTCC
CTCGCCCGCGTCCTCCCCAACTCCTCCTTCCTCCTCCCCGACGACTCGCTCCTCCCCACCGGCGAGGACTTCCCCTCCCC
CTCCCCCTCCTC------------------------CGACGCCGCCGACCAGGCCCAGGCCGCCGTTCCCTCGGGCATCA
ACGCCACT------GCGGGCACCTGCGACCCGGACGCCCCGCTCAACTGCACCGACCCGCGCGTGCTCGCCGCCGTCAAG
GCCTTCAACGCCAAGGCCTTCTTCCGCAGGTCCATCGTCTTCCTCAGCTACGAGGCGCCCGTGCGCGGGCCCAAGCCCGG
CCAGTGCGACGTCGCCTGGCGCTTCCGGAACCGCCGCGAGAAGTCCTGGCGCCGCTACAGGGACTACCGCCGCTTCGAGC
TCGCCCCCGCCGACGGGTGCGCGCTCGACATCACCAAGGTCGGCAAGTTCAGGTCGGGGAAGAACGCGGCTCGCCCGCCG
CGCCCCAAGGGCCCCAAGAAGCCGCGCGTCGCGGCGCCGCCGGTGGACGCGGAGATCAACGACACGATCCCCCTCGTTGG
GTCGGAGGCGGAGTTCAGGAGAGGCAAGTACCTCTACTACATGAGAGGCGGTGACCACTGCAAGAGCATGAACCAGTTCA
TCTGGAGCTTCCTCTGCGGGCTCGGCGAGGCCAAGTTCCTCAACCGGACGTTCGTGATGGATCTGAACATGTGCTTGTCC
GGGGCTCACACAGAGGACGGCAAGGATGTGGATGGCAAGGATTTTAGGTACTATTTTGATTTCGAGCACCTCAAGGAGTC
GGTGTCTCTGGTGGAGGAAGGGGACTTCTTGAAGGACTGGCGGCGCTGGGACAAGAAGAAGGGTCCGGGCCGGATCTCGG
TGCGGAAGGTGCCCACATACAAGGTGACACCAATGCAGCTGAAGAGGGACAAGAGCAACATCATTTGGAGGCAGTTTAAT
GGGCATGAGCCTGAGAACTACTGGTACAGGGTCTGCGAGGGGCGAGCTGCCAAGGTCATCCAGAGGCCTTGGTATGCTAT
TTGGAAGTCCAAGAGGCTGATGAACATTGTGACTGAGATCGCAGGCAGGATGGATTGGGACTACGATGGTTTGCATGTGG
TCCGAGGGTGGAAGGCAATGAACAAGAAGATGTATCCGAACTTGGACGCGGACACATCACCCGACGCGATCGTAGATAAG
GTGACCAAGCTTATCAAGCCGTGGCGGAACCTCTACATCGCAACCAATGAGCCATTCTACAACTACTTCGACAAGCTCAG
GTCACACTACCATGTGCATTTGCTTGATGATTATAAGGAGCTTTGGTCGAATACGAGCGAGTGGTACAACGAGACGACAG
CGATCAATAATGGGAAGGACTTGCCGTTCGATGCGTACATGAAGGTGATTGTGGACACTGAGGTATTCTACAGATCAAAG
GCAAAGGTTGAAACGTTTAACAACCTGACGAGAGATTGCAAAGATGGAATCAACACGTGCAATTTGTGACACATGAGTTC
ATGGTGTGATAATTATCGGTGTCCATATACTCTCTACTGGCTGGCGCAATGGAACTCGGGCGGACTTCATCCAGGGTTTG
TCATATTAGGCATAATATCTTGATGTCGCTTGT----CATAGCATGCTCAGTTGATTGCATTACATGTGCATCTAAATTA
TGTGCCCTCCATTCTTTTTGTATAATTTACCACTGTGCTCAAACCTGCAAAATCCAAAATAGTAACACTCAGTGAGCATT
TTGCAGTGCCTCTACTTCTTAGTGTCTGGACTTCTGCGGTATCT-TGAGTCCCCATTAGTTAGCTTGGGGTTTCTCTTCA
TTTATTGTATGTTTCCATATGTGCGTTGCTAAATATTCTCTAGTCGGAAATGAACTTTCAGAAAATTATATATTTTACTG
TCAAAAGTCAGAACAGAGGTCACTATGGCCATCAGATTACCATGTATGCCGTGTTCGTTGTCATAAGTAACTTACTTACC
TTGAATGATGCTTGCTCTGTGAGAATTGCAGACAATCAGTTGTGTTTCTCTTGTGTATAAATGGTAACATGTTGGAAGCT
GTGACATAATATTGGAAGCTATGACATAACAGCGAACTTCTAGAATAGTGCGTTTGCAGTTGTCAGCTGCCCAGTGTTAA
GTTGTGGACATTCATGCGATGTAGAGAAAAGAGAGGAGACCAGGCCAGTCTAGTCCAAATGAATCAACATATGTTGTATC
CTATTGCATGATAC------------------------------------------------------------------
------------------ATTGGTGCATATTTTAGGTTATGCAATTTCATTATGTTCGTTTGAGTATTTGTCACAGTGGG
TTTTCTTTTTTGTTTTTGTTAAAAATGAACATCACATCAGTATTATTATAATCCGATATCACAAAGGAAGCCTATCAATT
TAAGTCATTAGTTCAGACTTCGCACTCAAGGAAGATGGTAGGTGGCATACGTCCTTCACAATCGGTCGTTACACTAGTAG
TTTAAGTTTGATCAGCTGTTGTTTTCAGTGTGTTTGTTATCATCTCTTTGAGCGGCCGCACTTCAAGGAATGTTTCAACT
GGCTGTTTTCAACTTGAGGATGTTGGATACTGAAGCCATTCTGCGCATTTGTCTCGGACTGCTTTTTTGGACATGTTAGC
CTACCTTTCTGAGCTTGATGAATTCACAATGATGCTCATGGTTAAATTTATTTCTGCGCATTCATCTCAGGCTGCTTATT
TTGGAGATGTTGGCTGACCTTTCTGAGCTTGCTGAATTCATAATGATGGTTATGGTTAA
>chr2D_1
TGGTGGCTGATCTGAGACCGGTCGAGGTAACACTTTTGGCTTTGGACTTAAAAGGGGATGTTTGAACAAGGCGATGACAC
CCGCCTCAAGAAATGTTCATGGTAGGATG-------AGACCAGAAAGCCTACAATGGGGTGAAAATGAAACACAACATAA
GGAGAGCTTGAGAGTAGCAAAATGGGAAAGGATAATGGCGGAGGCAACTATTCAGCGGGATTGAAGTAGATAACGAGC--
----------TGGGGGACAAGACTAACGTACCACGAACGCCAGAG---------------------AGGTATCACCTAGC
TTCAGCTTCAAGAAAAAAAGAAAAAAGGGAAGAAAAAACAGCGCTCCAAACGGACTTGAAATGTTTGATTAAATTCATGG
TTTTGCATTT---------CAAAGGAAGCACAGTGTTTTTTT--------------------------------------
----------------------------------------------ATATCTTTTTAGAATGCATC--------------
-------------------------------------GTGTTCCCAACCCTTTTACTTCTTGTCCCGTTTGGCGTACTCT
GTACACCGTCGACGTGCACTCCTCTCTCCTTCCTTGCCGGTGAACTCGTCGGCGGTGAGGACGAGGTCACAGAGAAGGAA
GACGGAGACGATCGTACGCACCACTCAGCAGTGACAGTGACTGACGCGTCCATACCCACCTCTCGGCAAGAAGAGCAGGG
AAGACGACTGACCAGCGCCGTGCGTGCGTG----TGCGATCTCCTTTCTCCCCCTCCTA------AAAACTCGATCTTTC
TTCCTCCTAAAACTAAAAAATTACTCCGGCGCCGACACACACCACGCAACGCAAAGGAA----GGAAGACAGCCGAGCAC
GACAGTGCCACCCCACCGCACTCCCTTTCTCTCCCCCACTCCAACTCCACCTGCAACATCGCATCCCCATTCCCATTCCT
ACCTCTCCCACTCTCACTC------CCCCTCCCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGAGGACCACGACGAG
GACGCCCCCCTTGTCCGCGACCCG------TCCCCCTCCTCCTCCCGCCACC---------CCTCCCGCGCCTCCGCCTC
CGCCGTCGGCGAGGTGCCCGTCTCGCAGTCGCTCATCAAGGCGGCCAGCAACGTGTGCTTCTCCTTCTTCGTGCTCGCCG
TGCTCGCCGTCACCGTCGTCGCCGTCACCTACCAGCCGCCCGACCCCTGGCTCCAGTCCTCCGCCGCCATCACCACCTCC
CTCGCCCGCGTCCTCCCCAACTCCTCCTTCCTCCAGCCCGACGACTCGCTCCTCCCCACTGGCGAGGACTTCCCCTCCCC
CTCCGCTGCCCCCGGCGCCGCCGCCGCCGCCCAGCGCGACGCCGCCGACCAGGCCCTCACCTCGG------CGGGCGGCA
ACGCCACC------GCGGGGACCTGCGACCCGGACGCCCCGCTCAACTGCACCGACCCGCGCGTGCTCGCCGCCGTCAAG
GCCTTCAACGCCAAGGCCTTCTTCCGCAGGTCCATCGTCTTCCTCAGCTACGAGGCGCCCGTGCGCGGCCCCAAGCCCGG
CCAGTGCGACGTGGCCTGGCGCTTCCGGAACCGCCGCGAGAAGTCCTGGCGCCGGTACAGGGACTACCGCCGCTTCGAGC
TCACCCCCGGCGACGGATGCGCGCTCGACATCACCAAGGTCGGCAAGTTCAGGTCCGGGAAGAACGCGGCTCGCCCGCCC
CGCCCCAAGGGTCCCAAGAAACCGCGCGTCGCGGCGCCGCCGGTGGATGCGGAGATCAACGACACGATCCCCCTCGTCGG
GTCGGAGGCAGAGTTCAGGAGAGGCAAGTACCTCTACTACATGAGAGGCGGTGACCACTGCAAGAGCATGAACCAGTTCA
TTTGGAGCTTCCTGTGCGGGCTCGGCGAGGCCAAGTTCCTGAACCGGACGTTCGTGATGGATTTGAACATGTGCTTGTCC
GGGGCTCACACAGAGGACGGCAAGGATGTGGATGGCAAGGACTTTAGGTACTATTTTGATTTCGAGCACCTCAAGGAGTC
GGTGTCTCTGGTGGAGGAAGGGAATTTCTTGAAGGATTGGCGGCGCTGGGACAAGAAGAAGGGCCCGGGCCGGATCTCGG
TGCGCAAGGTGCCCACATACAAGGTGACCCCAATGCAGCTGAAGAGGGACAAGAGCAACATCATTTGGAGGCAGTTTGAT
GGGCATGAGCCCGAGAACTACTGGTACAGGGTCTGCGAGGGGCGAGCTGCCAAGGTCATCCAGAGGCCTTGGTATGCCAT
TTGGAAGTCCAAGAGGCTGATGAACATTGTAACTGAGATTGCAGGCAGGATGGATTGGGACTACGATGGTTTGCATGTGG
TCCGAGGGTGGAAGGCAATGAACAAGAAGATGTATCCGAACTTGGACGCGGACACATCACCCGACGCGATCGTAGATAAG
GTGACCAAGCTTATCAAGCCGTGGCGGAACCTCTACATCGCAACCAATGAGCCATTCTACAACTACTTCGACAAGCTCAG
GTCACACTACCATGTGCATTTGCTTGATGATTATAAGGAGCTTTGGTCGAATACGAGCGAGTGGTACAACAAGACGACAG
CAATCAATAATGGGAAGGACGTGCCGTTCGATGCGTACATGAAGGTGATTGTGGACACTGAGGTATTCTACAGATCAAAG
GCAAAGGTTGAAACGTTTAACAACCTGACGAGAGATTGCAAAGATGGAATCAACACGTGCAATTTGTGACACATGGGTTC
ATGGTGTGATAATTACCGGTGTCCATATACTC-CTACTGGCTGGCGCAATGGAACTTGGGCGGACTTCATCCAGGGTTTG
TCATATTAGGCATAATATCTTGATGCCGCTTGTCAGTCATAGCATGCTCAGTTGATTGCATTACATGTGCATCTAAATTA
TGTGCCCTCCATTCTTTTTGTATAATTTACCACTGTGCTCAAACCTGCAAAATCCAAAATAGTAACACTCAGTGAGCATT
TTGCAGTGCCTCTACTTCTTAGTGTCTGGACTTCTGCAGTATCTCTGAGTCCCCATTAATTAGCTTGGGGTTTCTCTTCA
TTTATTGTATGTTTCCATATGTGTGTTGCTAAATATTCTCTAGTCGGAAATGAACTTTCAGAAAATTATACATTTTACTG
TCAAAAGTCAGAACAGAGGTCACTATGGCCATCAGATTACCATGTATGCCGTGTTCGTTGTCATAAGTAACTTACTTACC
TTGAATGATGCTTGCTCTGTGAGAATTGCAGACTATCAGTTGTGTTTCTCTTGTGTATAAATGGTAACATGTTGGAAGCT
GTGACATAATATTGGAAGCTATGACATAACAGTGAACTTCTAGAATAGTGCGTTTGCAGTTGTCAGCTGCCCAGTGTTAA
GTTGTGGACATTCATGCGATGTAGAGAAAAGAGAGGAGACCAGGCCAGTCTAGTCCAAATGAATTAACATATGTTGTATC
CTATTGCATGATACTCCCTCCGTCCCAAAATGTAAGATGTTTTTTTGACACTATCATAGTATCAAAAAACGTCTTACATT
TCGGGACGGAGGGAGTACATTGGTGCATATTTGAGGTTATGTAATTTCATTATGTTCGTTTGAGTATTTGTCACAGTGGG
TTTTCTTTTTTGTTTTTGTTAAAAATGAACATCACATCAGTATTATTATAATCAGATTTCACAGTGGAAACCAATCAATC
TAAGTCATTAGTTCAGACTTTGCCCTCAAGAAAGATGGTAGGTGGCATAAGTCCTTCACAATCGGTCGTCACACTAGTAG
T-TAAGTTTGATCAGCTGTTGTTTTCAGTGTGTTTGTTATCACCTCTTTGAGTGGCCGTACTTCAAGGAATGTTTCAACT
GGCTGTTTTCGACTTGAGGATGTTGAGTATTGAAGCCATTCTGCGCATTTATCTCAGGCTGCTTTTTTGGACATGTTGGC
CTACCTTTCTGAGCTTGATGAATTCACAATGATGCTTATGATTAAATTTATTTCTGCGCATTCATCTCAGGCTGCTTATT
TTGGATATGTTGGCTGACCTTTCTGAGCTTGCTGAATTCATAATGATGGTTATGGTTAA
>chr2B_733
CCCAACCTATCGGCA-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------AGAGCAGGG
AAGACGACTGACCAGCGCCGTGCGTGCGTG----TGCCTCCTA--------------AAAAACGCAAAGCGCGATCTTCC
TTCCTCCTAAAACTAAAAAATTACTCCGGCGCCGACACACACCACGCACCGCAAAGGAA----GGAAGACAGCCGAGCAC
GACAGCGCCACCCCACCGCACTCCCCTCTTTCTCTCC---CCTACTCCACCTGCAACATCCCATCCCCATTCCCA-----
-------CCTCTCCCACTCTCACTCCCCCTCCGCGCTCCACCCAAATCTCGCCCCCGCTCCCCCCCAGAT---CCAGCCC
GCCCGCCCGCCATGTCCTCCTCCGACCA----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------GGAGGACCACGACGAG
GACGCCCCCCTCGTCCGCGACCCGGCCGCCCCCTCCTCCTCCTCCCGCCGCC---------CCTC---CGCCTCCTCCTC
CGCCGTCGGCGAGGTGCCCGTCTCGCAGTCGCTCATCAAGGCGGCCAGCAACGTCTGCTTCTCCTTCTTCGTGCTCGCCG
TGCTCGCCGTCACCGTCGTCGCCGTCACCTACCAGCCGCCCGACCCCTGGCTCCAGTCCTCCGCCGCCATCACCACCTCC
CTCGCCCGCGTCCTCCCCAACTCCTCCTTCCTCCAGCCCGACGACTCGCTCCTCCCCACCGGCGAGGACTTCCCCTCCCC
CTCCGCCGCCCCCGGCGCCGCCGCCGCCGCCCAGCGCGACGCCGCCGACCAGGCCGCCACCGCGC------CGGGCATCA
ACGCCACCGCTGCCGCGGGGACCTGCGACCCGGACGCGCCGCTCAACTGCACCGACCCGCGCGTCCTCGCCGCCGTCAAG
GCGTTCAACGCCAAGGCCTTCTTCCGCAAGTCCATCGTCTTCCTCAGCTACGAGGCGCCCGTGCCCGGCCCCAAGCCCGG
CCAGTGCGACGTGGCCTGGCGCTTCCGGAACCGCCGCGAGAAGTCCTGGCGCCGGTACAGGGACTACCGCCGATTCGAGC
TCGCCCCCGGCGACGGGTGCGCGCTTGACATCACCAAGGTCGGCAAGTTCAGGTCGGGGAAGAACGCGGCTCGCCCGCCT
CGCCCCAAGGGTAGCAAGAAACCGCGTGTCGCGCCGCCGCCGGTGGATGCGGAGATCAACGACACGATCCCCCTCGTCGG
GTCGGAGGCAGAGTTCAGGAGAGGCAAGTACCTCTACTACATGAGAGGCGGTGACCACTGCAAGAGCATGAACCAGTTCA
TTTGGAGCTTCCTGTGCGGGCTCGGCGAGGCCAAGTTCCTCAACCGGACGTTCGTGATGGATTTGAACATGTGCTTGTCC
GGGGCTCACACAGAGGACGGCAAGGATGTGGATGGCAAGGATTTTAGGTACTATTTTGATTTCGAGCACCTCAAGGAGTC
GGTGTCTCTGGTGGAGGAAGGGGATTTCTTGAAGGATTGGCGGCGCTGGGACAAGAAGAAGGGTCCAGGCCGGATCTCGG
TGCGCAAGGTGCCTACATACAAGGTGACCCCAATGCAGCTGAAGAGGGACAAGAGCAACATCATTTGGAGGCAGTTTGAT
GGGCATGAGCCTGAGAACTACTGGTACAGGGTCTGCGAGGGGCGAGCTGCCAAGGTCATCCAGAGGCCTTGGTATGCTAT
CTGGAAGTCCAAGAGGCTGATGAACATTGTAACTGAGATCGCAGGCAGGATGGATTGGGACTATGATGGTTTGCATGTGG
TCCGAGGGTGGAAGGCAATGAATAAGAAGATGTATCCGAACTTGGACGCGGACACATCACCCGACGCGATTGTAGATAAG
GTGACCAAGCTTATCAAGCCGTGGCGGAACCTCTACATCGCAACCAACGAGCCATTTTACAACTACTTCGACAAGCTCAG
GTCACACTACCATGTGCATTTGCTTGAGGATTATAAGGAGCTTTGGTCGAATACGAGCGAGTGGTACAACGAGACGACAG
CGATCAATAGTGGGAAGGACGTGCCGTTCGATGCGTACATGAAGGTGATTGTGGACACCGAGGTATTCTACAGATCAAAG
GCGAAGGTTGAAACGTTTAACAACCTGACGAGAGATTGCAAAGATGGAATCAACACGTGCAATTTGTGACACATGAGTTC
ATGGTGTGATAATTATTGGTGTCCATATACTC-CCAGTGGCTGGCGCAATGGAACTTGGGCGGACTTCATCCAGGGTTTG
TCATATTGGGCATAATATCTTGATGCCGCTTGT----CATAGCATGCTCAGTTGATTGTATTACATGTGCATCTAAATTA
TGTGCCCTCCATTCTTTTTGTATAATTTACCACTGTGCTCAAACCTGCAAAATCCAAA-TAGTAACACTCAGTGAGCCTT
TTGCGGTGTCTCTACTTCTTAGTGTCTGGACTTCTGCAGTATCTCTGAGTCCCCATTGGTTAGCTTGGGGTTTCTCTTCA
TTTATTGTATGTTTCCATATGTGTGTTGCTAAATATTCTCTAGTCGGAAATGAACTTTCAGAAAATTATACATTTTACTG
TCAAAAGTTAGAACAGAGGTCACCATGGCCATCAGATTACCATGTATGCCGTGTTTGTTGTCATAAGTAACTTACTTGCC
TTGAATGATGCTTGCTCTGTGAGAATTGCAGACTATCAGTTGTGTTTCTCTTGTGTATAAATGGTAACATGTTGGAAGCT
GTGACATAATATTGGAAGCTATGACATAACAGCAAACTTCTAGAATAGTGCGTTTGCAGTTGTCAGCTGCCCAGTGTTAA
GTTGTGGACATTCATGCGATGTAGAGAAAAGAGAGGAGACCAGGTCAGTCTAGTCCAAATGAATTAACATATGTTGTATC
CTATTGCATGATAC------------------------------------------------------------------
------------------ATT-GTGCATATTTTAGGTTATGTAATTTCATTATGTTCGTTTGAGTATTTGTCACAGTGGG
CTTTCTTTTTTGTTTTTGTTAAAAATGAACATCACATCAGTATTATTATAATCCGATTTCACAAAGGAAGCCTATCAATT
TAAGTCATTAGTTCAGACTTCGCCCTCAAGGAAGATGGTAGGTGGCATAAGTCCTTCACAATCGTTCGTCACACTAGTAG
T-TAAGTTTGATCAGCTGTTGTTTTCAGTGTGTTTGTTATCATCTCTTTGAGCGGCCGTACTTCAAGGAATGTTTCAACT
GGCTGTTTTCGACTTGAGGATGTTGAATATTGAAGCCATTCTGCGCATTTATCTCGGACTGCTTTTCTGGACATGTTAGC
TTACCTTTCTGAGCTTGATGAATTCACAATGCTGCTTATGGTTAAATTTATTTCTGCGCGTTCATCTCAGGCTGCTTATT
TTGGAGATGTTGGCTGACCTTTCTGAACTTGCTGAATTCATAATGATGGTTATGGTTAA
>SNPs
-------------S--SS------S-------------S--------------S-----------S----------S---
----------------SS-----S-SSSSSSSSSSS----S--S------------------------------SS-S--
-S-----S--S-------------------S--SS--S------------S--S-S-SS------------S---S-SSS
SSSSSSSSSS---------S---S---S-S----SS-----S---SSSSSSSSSSSSSSSSSSSSS----------S---
---------S-----S------SSS-S-------------S-S--S-SS-S---S--------------------S-S-S
SS-SSSSS-SSSSSSSSSS--S-S---S-------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--S-S-S---------S-SSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------S-S----------------S-S--S------
----------------------------------S----------------S--SSS-S-SS-SS-SSSSS-S----S--
----------------------------------------SS--------S-S--------------S------------
--S---------------------------SSSS------------------S-S-S-----------------------
----S-------S----------------------------------------------SSSS-----------------
--------------------------------------------------------------------------------
----------------------------S-----------S------------S-S---------SSSSSSSS-------
-----------------------S--------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------S---------
-----S----------------------------------------------SSSSSSSSS--S-----S----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------SS--------------------------------------------
----S--S--S---------------------------------------------SSS----S-SSSSSS---------
-------S-----------S------------------------------------------------------------
--------------------------------------------------------------------S-----------
------------S-----------------------------------------S-------------------------
---------S---------------------------------------------------------------------S
-----------S--------S--------------------------S-----------------------------S--
---------S----------------------------------------------------------------------
-S-----------S------------------------------------------------S-----------------
--------------------------------------------------------------------------------
------------------------S-----------S-------------------------------------------
----S-----------------------S------------------------------------------------S--
--------------------------------------------------------------------------------
------------------------------S-------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------S-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------S-----------------------S-----------------------
-------------------------S------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------S------------------------------------------
-----------------------S----------------------------------------------S---------
--------------------------------------------------------------------------------
---------------------------------S----------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------S---------------
--------------------------------------------------------------------------------
-----------------------------------------S--------------------------------------
---------------------------------------------------------S----------------------
-----------------------S-------------------------S-------------------S----------
-S--------------------------------------------------------S---------------------
----------S--------------S---S--------------------S-----------------------------
------------------------------------S-------------------------------------------
-----------------------------------------------------------
>forward_771
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------GGAAGATGATCGACGCGTCT-----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------
>reverse_2669
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------ACCAATGCAGCTGAAGAGGG--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------
>forward_1795
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------CCCAACTCCTCCTTCCTCCT---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------
>reverse_3141
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------TTGCCGTTCGATGCGTACAT----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------
>forward_2669
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------TGCCCACATACAAGGTGACA---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------
>reverse_4290
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------CGTCCTTCACAATCGGTCGT-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------
