>input_sequence_38341
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----------------------ATGGCTACTGCTAGTAGT---------ACGGCCTGGGGATCTCACCGGCAGCAGTTCT
CCGCCCTGCTATCCTCGGCGGTCCTGGAATGGGTGCTGATCCTGCTCATGCTGCTGGAGGGCCTGCTGTCCCGCCTGGCC
ACGGCGTTCGCGCGCCTCTGCAAGCTCCCGCCGCCCTGCCCGGCGTGCGCGCGGCTCGACGCCGTCCTCGGCGGGGCGCG
CCCGGGCTCCTCCTACCGCGACCTCCTCTGCAGCTCCCACAGGGCGGAGGCGTCGTCGTCCTGGGCGTTCTGCCATGACG
GTGGCATGG------------------GCATTGGGGACGTTTTGGGAGATCGGCGCGTCGTTGACGACGAGATCGATCGT
GTCGGGTACAGTGAGCTGAGGGCCTCCGACTCCGAGTCGGAGCTTAGAAGAAGGTCGCCGGAGGACGCCGCCGCCATCCG
TAGGCTGAAGGAGGAGCTTACTCTGGGCCAGGCGCAGACAAAGGTTGCAGATAGCCTTCCTCTCAAGATTCAGAATGGTG
GCCCGGATATTACACACT---CTGAAGATTCAAGGGAGCCGGGCAGCATCGAGGCCGACATTCAGTCAACTGATCTTGCC
ACAAATGATGAAGAACCTCATACCAAGGTTGCAGATGGCTTTCTCCAATCCGGGTTAACGCAAGTTCAGAGTGGCAGATT
ACACTCTAAAGATTCACACAACATTCAGACAAGTGATCTTCCAACAAAAGATGAAGAACCTCGTACAGATACACAAGGTG
TGTGCAGCATTACCCTTGACAAG----CATACCATCAATTAAATTTTGTCCTGCCAATCTGAATTTCTGACAATGCTGCC
ATTTTCTCCTGTA---GATCATAAACCAGAAGAAGAAGATGAGTGGCACAACGCTGATGA---TGGCGAGCCATTTGAAA
CCAAAGCTGCAGCAGATGAGCCGGAGCCTGAATTTGCCGACAGAGCCACCACACGGCAGGATTCCTTGAGAGTCCACCAG
CACCTGAAGCTGCTGCTCTCGCAGCTCTCCGCTTCTTCGTCTTCTTTCCGGACGCCCGACAGCCCGAGCGTGCAGGAGCA
GCAGCACGAGCAGGCCGTGCTGCGCAACATCACCAGGGCGCTCTCCCTGCAGCGGAACTACTCGGGCGTCTCCGACGGCA
GCGTGGTCGACAC------TGAAGCTGAGGAGTGCGGCACGGTTGATGAGCTGAGGCGGCGGGTGGAGCTGGACCGCAGG
TCCATGGCGCTCCTGTGGAAGGAGCTGGAGGAGGAGCGCAGCGCGTCGGCCGTGGCGACCAGCCAGGCCATGGCCATGAT
CACCAGGCTGCAGGAGGAGAAGGCGGCGATGCGGACCGAGGCGGCGCAGTACCGCAGGGTCATGGAGGAGCAGAGCGCGT
ACGATCGGGATGAAGCTGAGCGGCTGGCCGGCGTCGTGCGGGAGCTCGAGGCCGAGGTCGAGGGATACAAGGCCAGGCTC
AGGGACCACGAGATCGTCGGCGAGATCCGCGACCATATGCGGCTCCTTCCGTGCCAGACAGACGGCGAGACCGGCGGCGT
ACCCGTCTCCGGACCGGCCGGAGAGGAATTCTCCGGCGA---CTCCGAGGACGACGAGAACGCGCGCGCCTGGAAGCAGC
TGAGGGGGCTGACGGACAGGCTCCACCGGCTCTCGAACAACAGCAGCGGGATTGTCCAAGAACCGGAGCCCACGGACGTC
GAAGAAGAAGAAGAAGACGGCGACGGCGGCAAGGAGGAGGACACGACGGAACCTTCGGTGGTGGGGAGGCGCGTGAGGAA
CGGCGACAACTTCACGAAATGGCAGCATCTTCAGTCCATCGAGACGACGAGCAAGGGCTCGACTCACGGCCACGGCCACC
ACGGACACGACGGTGGCGGCGAGGGTGACGACACGGCAGCACTGGAGGAGGAGATCGGGGAGCTCAGCCGGCGGCTGCAG
GCGCTGGAAGCGGACCGGAGCTTCCTGGAGCACAGCGTGAACTCGCTGAGGAACGGGAGGGACGGCGAGGCCGTGATCCA
CGACATCGCTCGCAGCCTCAGAGAGCTCCGGAAGACACTCGGAGAGGATGCCATTGCTAGCTGA----------------
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>chr5A_1_TraesCS5A01G444100
ATGGATGTGCCAGCTTTACATCTAGAAATATGAAAGCATAAGCATCCCCATGACATGGCCACCCCTGGGAAATAATACTC
CCTCCGTCC--------TAATATAAGAGCATTTTTGACAATAGTGTCAAAAATAATGCTCTTATATTATGGGATGGAGAT
TGTAAAAAATAATGCTCTTATATTATGGGACGGAGGGAGTAGTAAATTTGAACGCCATATTAAAATGGAGAGAAGGAGCA
TTCACA-------TTTA-TTTCTCATTCATTAGGAAA-------AGAACGGAGCATTATTACTCCAACGTGAAGGATCTC
AA------------TTATTAGCAGAT-AAACCGACTTTTCCAAGCTCCATTTCCTGGTCCGGTGTCATCAGAAATGAAAA
GAAAAACAGA-------AAGGAAAAGGTTTAGATGGGACACAACGA-CATATTTAAACTGACAAC---TAATTGAGAAAG
CCACCACCCTATTATGTTTATT-TCGAAGAGAAAAGATCATCA--------TCAGCATTCACCTGTCGCCTCTTCTTCT-
-----TGTTGTTTATTTCGTCTAATCTCGTGTACATTTCCAACCT-GCCATGACAGGTTCCGGGGGTAGAGCTCATCCCT
CTCGCTGTCCCATTGACTG----GAAT---------TATTGATACACGTAGAAATCTCTCTCAGCCTTCAAT--TCTTTC
TTTGTTTATTGGACGGTTTCTTGGTAGTTGGCGAGTAGTGCTCCAGCTCCATCCAGGGGCCAGGAACGTGGGTCTGGAGG
AGATCTGAGCTTCCTTCTCCGTGAAGAAGGAAATTTGCTCAAGTCCACCAAAGATTTCATCGACGATCACTTCCACAGAT
GAGATGAAGGTATGTATGTATGTATGCATCTCTTCTCGCCTTCTTCAATAATTGGCTCAATTTGCACATCTCCTGATCCA
TCTT-GCCC-------TTCTCCGTTTAGAAATTTGTTCAAATTTTGTATTGAGAATCTGATATTCAATCAATCACCATGA
TCTG----------------------------------------CAGTGACAGCTCGG--------------TCCTTCCA
TCCCGAGCGAAGATC--GATCAATGGCTACTGCTAGTAGT---------ACGGCCTGGGGATCTCACCGGCAGCAGTTCT
CCGCCCTGCTATCCTCGGCGGTCCTGGAATGGGTGCTGATCCTGCTCATGCTGCTGGAGGGCCTGCTGTCCCGCCTGGCC
ACGGCGTTCGCGCGCCTCTGCAAGCTCCCGCCGCCCTGCCCGGCGTGCGCGCGGCTCGACGCCGTCCTCGGCGGGGCGCG
CCCGGGCTCCTCCTACCGCGACCTCCTCTGCAGCTCCCACAGGGCGGAGGCGTCGTCGTCCTGGGCGTTCTGCCATGACG
GTGGCATGG------------------GCATTGGGGACGTTTTGGGAGATCGGCGCGTCGTTGACGACGAGATCGATCGT
GTCGGGTACAGTGAGCTGAGGGCCTCCGACTCCGAGTCGGAGCTTAGAAGAAGGTCGCCGGAGGACGCCGCCGCCATCCG
TAGGCTGAAGGAGGAGCTTACTCTGGGCCAGGCGCAGACAAAGGTTGCAGATAGCCTTCCTCTCAAGATTCAGAATGGTG
GCCCGGATATTACACACT---CTGAAGATTCAAGGGAGCCGGGCAGCATCGAGGCCGACATTCAGTCAACTGATCTTGCC
ACAAATGATGAAGAACCTCATACCAAGGTTGCAGATGGCTTTCTCCAATCCGGGTTAACGCAAGTTCAGAGTGGCAGATT
ACACTCTAAAGATTCACACAACATTCAGACAAGTGATCTTCCAACAAAAGATGAAGAACCTCGTACAGATACACAAGGTG
TGTGCAGCATTACCCTTGACAAG----CATACCATCAATTAAATTTTGTCCTGCCAATCTGAATTTCTGACAATGCTGCC
ATTTTCTCCTGTA---GATCATAAACCAGAAGAAGAAGATGAGTGGCACAACGCTGATGA---TGGCGAGCCATTTGAAA
CCAAAGCTGCAGCAGATGAGCCGGAGCCTGAATTTGCCGACAGAGCCACCACACGGCAGGATTCCTTGAGAGTCCACCAG
CACCTGAAGCTGCTGCTCTCGCAGCTCTCCGCTTCTTCGTCTTCTTTCCGGACGCCCGACAGCCCGAGCGTGCAGGAGCA
GCAGCACGAGCAGGCCGTGCTGCGCAACATCACCAGGGCGCTCTCCCTGCAGCGGAACTACTCGGGCGTCTCCGACGGCA
GCGTGGTCGACAC------TGAAGCTGAGGAGTGCGGCACGGTTGATGAGCTGAGGCGGCGGGTGGAGCTGGACCGCAGG
TCCATGGCGCTCCTGTGGAAGGAGCTGGAGGAGGAGCGCAGCGCGTCGGCCGTGGCGACCAGCCAGGCCATGGCCATGAT
CACCAGGCTGCAGGAGGAGAAGGCGGCGATGCGGACCGAGGCGGCGCAGTACCGCAGGGTCATGGAGGAGCAGAGCGCGT
ACGATCGGGATGAAGCTGAGCGGCTGGCCGGCGTCGTGCGGGAGCTCGAGGCCGAGGTCGAGGGATACAAGGCCAGGCTC
AGGGACCACGAGATCGTCGGCGAGATCCGCGACCATATGCGGCTCCTTCCGTGCCAGACAGACGGCGAGACCGGCGGCGT
ACCCGTCTCCGGACCGGCCGGAGAGGAATTCTCCGGCGA---CTCCGAGGACGACGAGAACGCGCGCGCCTGGAAGCAGC
TGAGGGGGCTGACGGACAGGCTCCACCGGCTCTCGAACAACAGCAGCGGGATTGTCCAAGAACCGGAGCCCACGGACGTC
GAAGAAGAAGAAGAAGACGGCGACGGCGGCAAGGAGGAGGACACGACGGAACCTTCGGTGGTGGGGAGGCGCGTGAGGAA
CGGCGACAACTTCACGAAATGGCAGCATCTTCAGTCCATCGAGACGACGAGCAAGGGCTCGACTCACGGCCACGGCCACC
ACGGACACGACGGTGGCGGCGAGGGTGACGACACGGCAGCACTGGAGGAGGAGATCGGGGAGCTCAGCCGGCGGCTGCAG
GCGCTGGAAGCGGACCGGAGCTTCCTGGAGCACAGCGTGAACTCGCTGAGGAACGGGAGGGACGGCGAGGCCGTGATCCA
CGACATCGCTCGCAGCCTCAGAGAGCTCCGGAAGACACTCGGAGAGGATGCCATTGCTAGCTGAAAGCTTCGCTGGCCGG
GGTTGCTCATG---AGCATGCACATACAGAGGTGATTAATTCTTCAACCTCTGAACTGATGAAAATGGTTCGTGATCAAT
---CTGCTGGAAGTTCATCTGAACTTTTTATATGAACTCCACCTCCGATCGATCCAGTGATCATCACCGCTGCTAATCTC
ACTT-TTGATCCTTGTGATTTGATCGGTTGGAGTTCGAGCTGATCGAATGTTGTGCATGATGTAGGTTGTAAATAGTGAT
GAGGCTGCTCGATTGTACAATAAGCATGTGTGCATAT-------------GGTGCTGGATGGTTTGCAAGTGGACCAGGA
TTTTTTGCGTGGAGTGGTTGTTCTGCAATGCATTGCAGAATCAGGGTGTCACTGAATTCGCCCCCGTTTCAT--------
--------------------------------------------------------------------------------
----------------------------------------------------------------------GTACAAAATT
TTATCTTGACGGGTTTGAAATATTATGAAATTTTGAGAGGATGTAAGTGTGTTTCATATCTAAGATGGTGTAATGTTTCA
TATCGAAATTCAAAGTGCGCATCTAGA--AACAAAAATGACACGTCACGGTGTGAATAGTAGCTAATGCGAACCGGGCCT
TTAATTCAACCCATTTTCTTTACGCATCACCAATGAATGTTGACATTTTTAGCTCTTATACTATGTTTTGAATTCAGATA
TATAAATTTTTGTTTTATGATAAATACTTGTCACTGCTAGAACATAATTTATGTTTAGACTTTTTCAACATTCATAGAAA
GACTAATTTCAAACGGGTGCACCAAATATCCCCCCTACAGGATATAGATAAAATATTGTAGATACATGTGGCAAAAATTA
CATACTTTGAATTTAGGTGTTTTTAAAGAAATAAAATAAATATTTTTGGCTTATCG------------------------
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------------------------------------------------------------ACAATTAGTTATTATGTAAA
CTCTAAAATCAGATAAATGCCTCTGACCATTTTGGACATCACCCCCGTATGATTTTATGAAACCGGTTCTCTTAGAGATC
TATCGGTTAATTAGTAAGTTTTTTTTTTATAAGATCAATCAGTGAATA
>chr5D_1
ATGGATGGCCCAGCTTTACATCTATAAACATGAAAGCATAAGCATCTCCATGACATGGTCACCCCTGGGAAATAATACCC
CCTCCATCCCATAATAATAATATAAGAGCATTTTTTACACTAAATTTAGTACTCCCTCAGTCCCATAATATAAGAGCATT
GACTGTC---AATGCTCTTATATTATGGGACGGAGGGGGTAGTAAATTTGAACGCCATATTAAAAGTCAGAGAAGGACCA
TTCACA-------TTTACTTTCTCATTCATTTATTCATTAGAACAGAATGGAGCATTATTACTCCAACGTGAAGGATCTC
AA------------TTATTAGCAGATAAAACTGACTTTTCCAAGCTCCATTTCCTGACCCGGTGTCA---GAAATGATAA
GAAAATTAGA------GAGGAAAAAGGTTTAGATGGGACACAATGA-CATATTTAAATTGGCAACTAGTAATTGAGAAAG
CCACCACCCTGTTATCTTTATT-TCCAAAAGAAAAG---ATCA--------TGAGCATTCACCTGTCGCCTCTTCTTCTT
TATCTTGTTGTTTATTTCGTCTAATCTGGTGTACATTTCCAACCTTGCCATGACAGAGTTCAT-----------ATCCCT
CTCGCTGTCCCTTTGACTGACTGGAAT---------TATTGATACGCGTAGAAATCTCTCTCAGCCTTCAATTTTCTTTC
TTTGTTTATTGGACGGTTTCTTGGTAGTTGGCGAGCAGTGCTCCAGCTCCATCCAGGGGCCACGAACGTGGGTCTGGAGG
AGATCTGAGC---CTCCTCCGTGAGGAAGGAAATTTGCTAAGTCCACCT-AAGATTTCATCGACGATCACTTCGACACAT
GAGATGAAG----GTATGTATGTATGCATCTCCTCTCGCCTTCTTCGATCATCGGCCCAATTTGCACATCTCCTGGTCCA
TCTTAGCCC-------TTCTCCGTGAAGAAATTTGCTCAAATTCTCTACTGAGAATCTGAGATTCAGTCAATCACCATGA
TCTGCAACTCGCCATTTCCCCAGGCAAGAAGCAGCTTCTACGCTCAGTGACAGCTCGG--------------TCCTTCCA
TCCCATTCCCAGGTGAAGATCAATGGCTACTACTAGTAGT---------ACGGCCTGGGGATCTCACCG---GCAGTTCT
CGGCCCTGCTATCCTCGGCGGTCCTGGAATGGGTGCTGATCCTGCTGATGCTGCTGGAGGGCCTGCTGTCCCGCCTGGCC
ACGGCGTTCGCGCGCCTCTGCAACCTCCCGCCGCCCTGCCCGGCGTGCGCGCGGCTCGACGCCGTCCTCGGCGGGGCGCG
CCCGGGATCCTCCTACCGCGACCTCCTCTGCAGCTCCCACAGGGCCGAAGCGTCGTCTTCCCGGGCGTTCTGCCATGACG
GTGGCATGG------------------GCATTGGGGACGTTTTGCGAGATCGGCTTGCCGTCGACGACGAGATCGATCGC
GCCGGGTACAGTGAGCTGAGGGCCTCCGACTCCGAGTCCGAGCTGAGAAGAAGATCGCCGGAGGACGCCGCTGCCATCGA
TCGGTTGAAGGAGCAGCTTACTTTGACGCAAG------------------------------------TTCAGAGTGGCG
TCCCGGACAGAACACACGCTGCTGAAGATTCAAGGGAGCCGGGCAGCATCGAGGCCGACATTCAGTCAACTGATCTTCCC
ACAAAAGATGAAGAACCTCATACGAAGGTTGCAAATGGCGTTCTTCAATCCGAGCTGATGCAAGTTCAGAGTGGCAAATT
ACACTCTGAAGATCCAGACAACATTCAGACAAGTGATGTTTCAACAAAAGATGAAGAACCCCATACAGATACAGGAGGTG
TGTGCAGCATTACCATTGACAAC----CATACCATCTGTTAAATTTTGTCCTGCCAATCTGAATTTCTGACAATGCTATC
TTTTTTTCCTGTA---GATCATAACCCAGAAGAAGA---TGTGTGGCACGACGCTGATGA---TGGCGAACCATCTGAAA
CCGAAGCTGCAGCGGATGAGCCGGACCCTGAATTTTCCGACAGAGCCACCACACGGCAGGATTCCTTGAGAGTCCACCAG
CACCTGAAGCTGCTGCTCTCGCAGCTCTCCA---CTTCGTCTTCTTTCCGGGCGCCCGACAGCCCGAGCGTGCAGGAGCA
GCAGCACGAGCAGGCCGTGCTGCGCAACATCACCAGGGCGCTCTCCCTGCAGCGGAACTACTCGGGCGTCTCCGACGGCA
GCGTGGCCGGCGCTGAAGGTGAGGCTGAAGAGTGCGGCACGGTTGATGAGCTGAAGCGGCGGGTGGAGCTGGACCGCAGG
TCCATGGCGCTCCTCTGGAAGGAGCTGGAGGAGGAGCGGAGCGCGTCGGCGGTGGCGACCAGCCAGGCCATGGCCATGAT
CACCAGGCTGCAGGAGGAGAAGGCGGCCATGCGGACGGAGGCCGCGCAGTACCGCAGGGTCATGGAGGAGCAGAGCGCGT
ACGACCGGGATGACGCCGAGCGGCTGGCCGGCGTCGTGCGGGAGCTCGAGGCCGAGGTCGAGGGATACAAGGCCAGGCTC
AGGGACCACGAGATCGTCGGAGAGATCCGCGACCATATGCGGCTCCTTCCGTGCCAGAGAGAAGGCGAAACCGGCGGCGT
GC------CCGGAGCGGCCGGAGAGGAATTCTCCGGCGGCGGCTCCGAGGACGACGAGAACGCGCGCGCCTGGAAGCAGC
TGAGGGGGCTGACGGACAGGCTCCACCGGCTCTCGAACAACAGCAGCGGGAGCGTCCAAGAACCGGAGCCCACCGACGTC
GAAC---AAGAAGAAGAGGGCGGCGGCGGCAAGGAGGAGGACACGACGGAAGCTTCGGTGGTCGGCAAGCGCGTGAGGAA
CGGCGACAACTTCACGAAATGGCAGCATCTTCAGTCCATCGAGACGACGAGCAAGGGCTCCACTCACGGCCACGGCCACC
GAGGAGACGACGGCGGCGGCGAGGGCGACGACACGGCCGCGTTGGAGGAGGAGATCGGGGAGCTCAGCCGGCGGCTGCAG
GCGCTGGAAGCGGATCGGAGCTTCCTGGAGCACAGCGTGAACTCGCTGAGGAACGGGAGGGACGGCGAGGCGGTGATCCA
CGACATCGCTCGCAGCCTCAGAGAGCTCCGGAAGACGCTTGGAGAAGATACCATGGCTAGCTGAAAGTTTCAGCGGCCGG
GGTCATGCTCATGCAGCATACACACACAGAGGTGACCAATTCTTCAACCTTCGCAC---TGAAAATGCTTCGTGATCAAT
---CTGCTGGAAGTTCATCTGAACTTTTTATATGAACTACACCTCCGATCGATCCAGTGATCATCACCGCTGCTAATCTC
ACTT-T-GATCCTTGTGATTTGATCGGCTGGAGTTGGAGCTGATCGAAGGTTGTGCATGATGTAGGTTGTAAATAGTGAT
GAGGCTCGTTGACCGTACAATAAGCATGTGTGCATATATGGTGGTGGACTGGTGCTGGTTGGTTTGCAAGTGGACCAGGA
TTTTTTGCGTCGAGTGTTTGTTGTGCAATGCATTACAGAAGTAGAGTGTCATGGAATTTGCACCCGTTTCATGT------
--------------------------------------------------------------------------------
---------------------------------------------------------------------AGTACAAATTT
TTATCTTGACGGGTTTGAAATATTGT----------GAGGATGTAAGTATGATGCATAACTACCATGGTGTAAAATTTCA
GATCAAAATTCGAAGTGCATATCTAGA--AACAAAAATCACAGGTGACGGTGTGAATAGTAGCTATTGCGAACCGGGCCT
TTAATTCAACCAATTTTC--------------------------------------------------------------
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------------------------------------------------
>chr5B_186
AGGGGGAGTAAC--------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------TTTAAGCGCCATATTAAAGGTGAGAGAAGTAGCA
TTCATTCACTCCCTTTATTTTCTCATTCATTAGGAAA-------AGAACGGAGCATTGTTACTCCAACTTGAAGGGTCTC
AATTATTAGTAGCCTTATTAGCAGATAAAACTGACTTTTCCAGGCTCCATTTCCTGACCCGGTTTCA---GAAATGAAAA
AGAAAAATACTACGTGGAAGGAAAAGGTTTGGATGGGACACAGTGGGCATATTTAAATTGAAGAACCCAGAAAG------
---CCACCCTGTTATGTTTTGTGTCGAAAAGAAAAGATCATCATCAGCAATTCAGCATTCAGCTGTCGCCTCTTCTTCTT
G-----------------GTCTAATCTCGTGTACATTTCCAACCAATCTGGACG--------------GAGTTCATCCCT
CTCGCTGTCCCTTTGACTG----GAATTATTGCTAGTATTGGTACGCGTAGAAATCTCTCTCAGCCTTCAATT--CTTTT
CTTGTTTATTGGACGGTTTCGTGGTAGTTGGCGAGTGGTGCTCAGGAAAGAAAGAGGG-----------------GGAGG
AGATCTGGGCTTTGTGTTCTTCCCCTCTCCTGAATTCCCTCCTCCTGTCCTGCCAAGTCAAGGA------------AGAT
GAGATGAAGGTATGGTGTGTACGCATGTTTCTTGATTC-------------------------------------ATCCA
TCTT-GCCCATTCTGATTCTCAGTGAAGAAGTCTGTTCAGATCCTATAGATTGAGTCGAATCAGCATGCGTGATCT-TGA
TCTGCAACCTGTC--TTCCTCAGGAAAGAAGCGGCCTGTGTACTCATCAGTGGCAGCCTATCCATCCATCCATCCATTCA
CCCCAAGGGAAGATC--AATCAATGGCGCCAAGAGCAAGAGCTACCGGCACGGCCTGGGGATCTCACCGGCAGCAGCTCT
CTGCCCTGCTATCCTCGGCGGTCCTGGAATGGGTGCTGATCCTGCTGATGCTGCTGGAGGGCCTGCTGTCGTACCTGGCC
ACGGCGTTCGCGCGCCTCTGCAACCTCCCGCCGCCGTGCCCGGCGTGCGCGCGGCTCGACGCCGTCCTCGGCGGGGCGCG
CCCGGGCTCCTCCTACCGCGACCTCCTGTGCAGCTCCCACAGGGCGGA---------------GGCGTTCTGCCATGATG
GTGGCGGCGTGGGCATCGGGGAGGTTTGCAGTGGAGATGTTTCAGGGGGTCGGCTCGCCGTCGACGACGGGTTCGATCGC
GCCGGGTACAGTGAGCTCAGGACCTCCGACTCCGAGTCCGAGCTGAGAAGAAGATCGCCGGAGGACGCTGCCGCCATCGA
TCGGTTGAAGGAGCAGCTTACTTTGACGCAAG------------------------------------TTCAGAGTGGCG
TCCCGGACAGAACACACGCTGCTGAAGATTCAAGGGAGTTGGGCAGCATC---------ATTCAGACAAGTGAACTTCCC
ACAAAAGATGAAGAATCTCACACGAAGGTTGCAGATAGCGTTCTTCAATCCGAGTTAACGCAAGTTCAGAGTGGCAAATT
ACACTGTGAAGATCCAGACAGCATTCAGACAAGTGATCTTCCAACAAAAGATGAAGAACCCCATACAGATACAGGAGGTG
TGTGCAGCTTTACCATTGACAACCATACATACCATCTGTTAAATTTTGTCCTGCCAATCTGAATTTCTGACAATGCTATC
TTTCTTCCATGTAGATGATCATAACCCAGAAGAAGA---TGTGTGGCACAATGCTACTGACACTGGCGAACCGTCTGAAA
CCAAAGCTGCAGCAGATGAGCCGGACCCTGAATTTTCCGACAGGGCCACCACACGGCAGGATTCCTTGAGAGTCCACCAG
CACCTGAAGCTGCTGCTCTCGCAGCTCTCCA---CTTCTTCTTCTTTCCGGGCGCCCGACAGCCCGAGCGTGCAGGAGCA
GCAGCACGAGCAGGCCGTGCTGCGCAACATCACCAGGGCGCTCTCCCTGCAGCGGAACTACTCGGGCGTCTCCGACGGCA
GCGTGGCCGGCGCTGAAGGTGAGGCTGAAGAGTGCGGCACGGTTGACGAGCTGAAGCGGCGGGTGGAGCTGGACCGCAGG
TCCATGGCGCTCCTGTGGAAGGAGCTGGAGGAGGAGCGGAGCGCGTCGGCGGTGGCGACCAGCCAGGCCATGGCCATGAT
CACCAGGCTGCAGGAGGAGAAGGCGGCCATGCGGACGGAGGCGGCGCAGTACCGCAGGGTCATGGAGGAGCAGAGCGCGT
ACGATCGTGACGAGGCTGACCGGCTGGCCGGCGCGGTAAGGGAGCTCGAGGCCGAGGTCGAGGGATACAAGGCCAGGCTC
AGGGACCACGAGATCGTCGGCGAGATCCGCGACCATATGAGGCTCCTTCCGTGCCAGACACAAGGCGAGACGGGCGGTGT
CTCCGGCTCCGGACCGGCCGGAGAGGAATTCTCCGGCGGCGGCTCCGAGGACGACGAGAACGCGCGCGCCTGGAAGCAGC
TGAGGGGGCTGACGGACAGGCTCCACCGGCTCTCCAACAACAGCAGCGGGATCGTCCAAGAACCGGAGCCCACGGACGTC
GAAGAAGAAGAAGAAGACGGCGACGGCGGCAAGGAGGAGGACACGACGGAAGCTTCGGTGGTCGGCAAGCGCGTGAGGAA
CGGCGACAACTTCACGAAATGGCAGCATCTTCAGTCCATCGAGACGACGAGCAAGGGCTCGACTCACGGCCACGGCCACC
GCGGAGACGACGGCGGCGGCGAGGGCGACGACACGGCCGCACTGGAGGAGGAGATCGGGGAGCTCAGCCGGCGGCTGCAG
GCGCTGGAAGCGGACCGGAGCTTCCTGGAGCACAGCGTGAACTCGCTGAGGAACGGGAGGGACGGCGAGGCGGTGGTCCA
CGACATCGCTCGCAGCCTGAGAGTGCTCCGGAGGACACTTGGAGAGGACACCATGGCTACCTGAAAGCTCCAGTGGCGAG
GC----------------------------GGTGATTACTTCTTCAACCTTTGAAC---TGAAACCATTTCGTGATCAAT
CTGCTGCTAGAAGTTAATCTGAACTTGTTATACGAATTGACCTCA-GATCGATCCAGTGATCATCACTGCTGCCAATTTC
ACTTTT-GATTCTTGTGATTTGATCGGCTGGAGTTCGAGCTGATCGAAGGTTGTGAATGATGTAGGCTGTAAATAGTGAT
GAGGCTGGCTGACTGTACAATAAGCATCTGTGCATATA------------------------------------------
TTTTTTGCGTCGAGTGTTTGTTCTGCAATGCATTGCAGAATCAGGGTGCCTTTTTTAGAGATTCTAATATGTACTCCCGC
CGTTTCCAAATACAAGTCTTTTTTAGAGATTCTAATATGGAGTACATACAGAGCAAAGGAGTGAATCTACACTCTAGAAT
ACGTCTATATTCATCCGTATGTAGTTCATATTCAAATATTTAAAAAGACTTATATTTAAGAACAGGGGGAGTACAAAATT
TTATCTTGACGGGTTTGAAATATTATGAAATTTCGCGAGGATGTAAGTATGATGCATATCTAACACGGTGTAAAATTTCA
GATCAAAATTGAAAGTGCATATCTAGAAGAAAAAAAATGACACGTCACGGTGTGAATAGTAGCTAATGCGAACCAGGCCT
TTAATTCAACCCATTTTCTTTATGACCAATGATTTGT------CATTTTTAGCTCTCATACTATGTCTCGAATTCGGATA
TTAAAA--TTTGTTTTATGATAGATTCTTGTTGCAATTAGAACATAATTTATGTTTAGAATTTTACAACGTTCATAGAAA
AACTAATTTCAAACGGGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAACAATTAGTTATTATATAAA
CTCTAAAATCAGATAAATGCCTCTGACCATTTTGGACATCACCCTCGTATGATTTTATGAAACCGGTTCTCTTATAGCTC
TATC--------------------------------------------
>SNPs
-------SS---------------S---S-----------------S-----------S-------------------S-
-----S-----------------------------S---S--SSS-S-SS-S-SSSS-SS-SSS--S--SSS-SS-SSS-
SSSSSSSSSS---------------------------S---------------------------SS-------------
--------------------------------------------------------------------------------
-------------------------------S------------------------SS---------SSS----------
------S------------------------------------S-------------S----------------------
----------S-----------------S---------------------------------------------------
--------------------------------------------------------SS-S-SSSSSSS---S--------
-----------S---------------------------------S----------------------------------
--------------------------------------------------------------S-----------------
------------S--S--------S--------------S-SSS-SS--S-----------------------S------
----------------------------------------------S--S--S---S-----------------------
------------------------SS-----------------S-S--S-----------------S-------------
--------------------------------------------------------------------------------
----S--------------------------S------------------------------------------------
-S--------------------------------------------S---------------------------------
-----------------------S--------------------------------------------------------
------------------------------------------------S--------S---S------------------
------------------------------------------------------S--S---S-----------------S
-S------------------------------------S-----S--------S------------------------SS
-S--S--------S--------S--SSS--S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------S---S-
S------S-SS------S-----------------------------------------------------------S--
-----S-----------------S---------------S----S-------S-----------------------S---
-------S-----S--S-------------------------------------------S-S----------SS-----
--------------S-------S-------------SS---------------------------------------SS-
S----S------------------S-----------SSS--S---------------------------S----S-----
-------------------------S---------S--------------------------------------------
------------------------------SSSS-----------------S----------------------------
--------------------------------------------------------------------------------
------S--S-S----------S-----S-------------------------S-------------------------
--------------------------------------S-----------S-----------------------------
---------------------------S--------S-------------------------------------------
-------------S------------------------------------------------------------------
--------------------------------------------------------------S-----------------
S----S--------------------------------S-----------------------------------------
----------------------------------------------------S---------------------------
---------------------------------------------------S----------S--S-S------------
--------------------------------------------------------------------------------
S----S-------S-----------S-----------S------------------------------------------
-----------------------------------------------------------------------S--------
---------------------------------------S---------S----S----------------SS-------
---SSSS-SSS--------S----S-------------------------S-----SSS--------S------------
--------------------------------------S-----------------------------------------
------S--------------------S--------------------S-------------------------------
-------S-S--S---------------------------------------------S---------------------
----------S-----S----------------------------------S------S--S------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------S-S------------S--S-S---------S---------SS-----
S---S-------------SS------------------------------------------------------------
----------------------S-SSSS-SS-S-SSSSSSSSS-------------S---------S-S------S----
-SS---SS--------------S--S-----SS-SSS----------------------S----S----S----------
S-----------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------------------
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---------------------------------------------------------------------------S----
--------------------------------------------S-----------------------------S--S--
----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_985
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-----CCATCTTGCCCTTCTCCGTT-------------------------------------------------------
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>reverse_2330
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---------ACACTGAAGCTGAGGAGTGC---------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------
>forward_1247
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------AATGGGTGCTGATCCTGCTC---------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------
>reverse_3240
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------CGGAGAGGATGCCATTGCTA---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------
>forward_2349
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------TGGTCGACACTGAAGCTGAG---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------
>reverse_3659
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------CGCCCCCGTTTCATGTACAA--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------
