>input_sequence_38331
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-----------------------------------------------------------ATGTGGGCTACCAAGCACACC
TTGCAAGCGCTTCTCCCATGGCTCCTCCTGTTCGTGCACCAGGCCGCGGCGGCCAGCGGCGGGTGCGAGTGCACGACCGC
CACGGACGGGGCGGACAAGCAGGGCGCGACGAAGCTGAAGCTGGTCGCCATCGCGTCCATCCTGACCGCCGGGGCGGCTG
GCGTGCTGGTGCCGGTGCTCGGCCGCTCCATGGCCGCGCTGCGCCCCGACGGCGACATCTTCTTCGCGGTCAAGGCGTTC
GCGGCCGGTGTCATCCTTGCCACCGGCATGGTGCACATCCTGCCAGCGGCTTTCGACGGGCTCACCTCCCCGTGCATCCA
CAAAGGCGGCGGGGACAGAAACGGCTTCCCTTTTGCGGGACTTGTGGCCATGTCTGCAGCCATGGCCACAATGGTGATAG
ACTCGCTGGCTGCTGGGTACTACCGCCGGTCTCACTTCAGCAAGGCACGCCCACTTGACAACATCGACATACCCGAACAC
GCCGGAGACGAGGAAGGGAGGGCCAATCATCCACATGTGCACGCGCATGGCCATTCACATGGTGACGCAATTGTTGTCAG
CTCACCGGAGGAGGCGGCAATAGCTGACACAATCCGGCACAGGGTGGTATCTCAGGTAAGTA--------------AGAG
CAGCCACTCCAAAGCACATAGGACTTCCTGGCAACAGTAATTGGAGGTTAGTTCCATAACTTCCCGTATACCAGAAAAAT
AGTGAATCTTAAAATGATGGGAGCATGAAAGAAGCAACTT---CAAATATACTCAAATATATTAGCTTTTCATGAACATG
AATAAAGATGACGTAGTGGAAAGGTGAACTACGTCAGCACATAATGTTCCAAAATATCTCATCTGACCAAACTAATATCT
ACACAGAACAATTTCAGAGCAGAACCAAAAGGCATAGTGGCAGGTTAAATAATTCTCCAAGGTCAATTTGGCATCTCTCT
CAAAACCTTTCCATAAAGAAACACAAATAAACAGGGGATGGGAATGAGTAGATCAATACCTATTCGAAAGGTCTGGCAGT
TCGCGGTTTACTCCTTTAGGACAAACTTTTCCTCTTC-AATAAAGAATCCAGTTCCTCCGCAAACTGTTTGCCAAGTTGG
TAGATATTTTGAAGAACCAACCAGTCCCGTGTTAAATAACCATAAAGTTT-CATCATGCAGGTTCTAGAGCTGGGAATCC
TGGTGCATTCAGTGATAATTGGCGTGTCATTAGGAGCATCTGTGAGGCCATCCACCATCAAGCCTCTGGTCGGTGCCCTC
AGCTTCCATCAATTCTTTGAAGGCATAGGCTTGGGTGGTTGCATTGTACAGGTACCTGCTTGCACTGATAAGAATCTAAC
TTGTTTTCCTGCCTCCATTTTT-AATATGATACCACCAAGGTAAAAAGACAATTATAAATCAACATGTCAGG----ATAT
ATATATACACTCACAGAAGGGGAGGAAAAA--AATAAAGGATAATTACAATATTAAGTTTAAATCAGATGAACACATACT
GATGATTTTCTTCTAAAAACAATCAACACACT--ATATACAACAGCTATTGATAATTGAACTTTTCAGGGAGAAAATAGG
AAGTTGCTAGTTAGAGAACTGATATTCCAGTCCTAAAGACATAAGCTAATGTAAGCAAAGATTCTGAAGAAAGCAAACAA
ATGACACAGAGGATAAAGAACCAACTTTATAAAGTGGTCCAGAGCAACAAAAGGCTAAGTAGCTAA---CATCTTTGATT
TCCACTTTTCACTGCAGGCTAATTTCAAGGTGAGGGCAACCATCATCATGGCAACGTTTTTCTCCCTGACCGCACCCGTG
GGCATCGTGCTAGGGATTGCGATTTCATCTAGCTATAATGTGCATAGCTCTACTGCCTTCATTATTGAGGGAGTCTTCAA
CTCAGCCTCGGCAGGGATTTTGATCTACATGTCCCTGGTGGACCTTCTAGCAACAGATTTCAATAACCCAAAGCTACAGA
CAAATACAAAGCTTCAGCTGATGACATATCTTGCACTTTTCCTAGGTGCAGGGATGATGTCCATGCTTGCCATATGGGCA
TAG-----------------------------------------------------------------------------
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>chr2D_1_TraesCS2D01G422000
AGAGATTCTTTCTACTATCGATCTTATCAACTTTGGATTGGGATTTGGGAGGAGGAGAAGGCCCTGGCCGTGCGCCAAGG
TCAGTGGAACTATCTCACGTCCA-TGATGATTGTGACCCAAGAAAAACCAACTGCAGCGAAAAGAGCCCAGCGAACATGC
GATACATGGCGTGCATTTTGGCCCCTTCGTACAGGGAACACTGGATCATTCCATCGCCAACGCCTCCATTGGCTAAGGAC
GGATGTCGTGTGATCTCGGCCGTCCGATTCGGGTTCCATTCATGTGCGGCAGGAATATGT-----CAGCCAGCTTTGACA
GCTTGCA-----------CACCTTTTTACCTCGCACCGGTCGCCCAAGGCCTCTCGAT--GGTCAATCAATCTGGCCGAA
CCCGCACCACCGAAAACATGAGCAAGCAGACTCCTGAAAAGCCTAACTTGG-CCGATGACGACATTGTGTCAACACTGCA
CTAAAACCGACCAGAAAGCGCATC----------------------ATCCTCAGCCGCCATCG-CCAAGCACACCTTCCT
GCCCTCCCTATACACGTACCCACGCTGGATTTTGCAGGGCGAAATTCAGAATCAGGCCCCCTATCCGC------CTTCGT
CCATCCAGTGATCGGCGACGAGGCATGCCAGCCGACCCGA----------------------------------------
------GCCGACGGCTGGTGACCATGGATGAAAACAAGTTTCAATTTCGGCCGTGGATCCTGGATGGAAACATCTCCCGA
AAGTGCAGAGAATCCAGTTTCCGGATACCATGTCATTAAAGTATCACGCATCAACCCCCCGCAAAAAAAAAAAGTATCAC
GCATCAACGACACTTTGCACCGAGGTTAGTGACACATGGCACACACGATGTGCAGCCCCCGGGAGCACCAGACCCCACCT
GGACAAAGGACAGCAACTCTCCTCACCCCAGCGCCTCCTATA-TTAAAGTACCCGGCGTTGGCTCTTGCTCTAT--CTCC
CTGCAGCACATATCACATTCAGGCGTAACC-ATCAGCAATTCAGCAGAGTCACACCGCGATGTGGGCTACCAAGCACACC
TTGCAAGCGCTTCTCCCATGGCTCCTCCTGTTCGTGCACCAGGCCGCGGCGGCCAGCGGCGGGTGCGAGTGCACGACCGC
CACGGACGGGGCGGACAAGCAGGGCGCGACGAAGCTGAAGCTGGTCGCCATCGCGTCCATCCTGACCGCCGGGGCGGCTG
GCGTGCTGGTGCCGGTGCTCGGCCGCTCCATGGCCGCGCTGCGCCCCGACGGCGACATCTTCTTCGCGGTCAAGGCGTTC
GCGGCCGGTGTCATCCTTGCCACCGGCATGGTGCACATCCTGCCAGCGGCTTTCGACGGGCTCACCTCCCCGTGCATCCA
CAAAGGCGGCGGGGACAGAAACGGCTTCCCTTTTGCGGGACTTGTGGCCATGTCTGCAGCCATGGCCACAATGGTGATAG
ACTCGCTGGCTGCTGGGTACTACCGCCGGTCTCACTTCAGCAAGGCACGCCCACTTGACAACATCGACATACCCGAACAC
GCCGGAGACGAGGAAGGGAGGGCCAATCATCCACATGTGCACGCGCATGGCCATTCACATGGTGACGCAATTGTTGTCAG
CTCACCGGAGGAGGCGGCAATAGCTGACACAATCCGGCACAGGGTGGTATCTCAGGTAAGTA--------------AGAG
CAGCCACTCCAAAGCACATAGGACTTCCTGGCAACAGTAATTGGAGGTTAGTTCCATAACTTCCCGTATACCAGAAAAAT
AGTGAATCTTAAAATGATGGGAGCATGAAAGAAGCAACTT---CAAATATACTCAAATATATTAGCTTTTCATGAACATG
AATAAAGATGACGTAGTGGAAAGGTGAACTACGTCAGCACATAATGTTCCAAAATATCTCATCTGACCAAACTAATATCT
ACACAGAACAATTTCAGAGCAGAACCAAAAGGCATAGTGGCAGGTTAAATAATTCTCCAAGGTCAATTTGGCATCTCTCT
CAAAACCTTTCCATAAAGAAACACAAATAAACAGGGGATGGGAATGAGTAGATCAATACCTATTCGAAAGGTCTGGCAGT
TCGCGGTTTACTCCTTTAGGACAAACTTTTCCTCTTC-AATAAAGAATCCAGTTCCTCCGCAAACTGTTTGCCAAGTTGG
TAGATATTTTGAAGAACCAACCAGTCCCGTGTTAAATAACCATAAAGTTT-CATCATGCAGGTTCTAGAGCTGGGAATCC
TGGTGCATTCAGTGATAATTGGCGTGTCATTAGGAGCATCTGTGAGGCCATCCACCATCAAGCCTCTGGTCGGTGCCCTC
AGCTTCCATCAATTCTTTGAAGGCATAGGCTTGGGTGGTTGCATTGTACAGGTACCTGCTTGCACTGATAAGAATCTAAC
TTGTTTTCCTGCCTCCATTTTT-AATATGATACCACCAAGGTAAAAAGACAATTATAAATCAACATGTCAGG----ATAT
ATATATACACTCACAGAAGGGGAGGAAAAA--AATAAAGGATAATTACAATATTAAGTTTAAATCAGATGAACACATACT
GATGATTTTCTTCTAAAAACAATCAACACACT--ATATACAACAGCTATTGATAATTGAACTTTTCAGGGAGAAAATAGG
AAGTTGCTAGTTAGAGAACTGATATTCCAGTCCTAAAGACATAAGCTAATGTAAGCAAAGATTCTGAAGAAAGCAAACAA
ATGACACAGAGGATAAAGAACCAACTTTATAAAGTGGTCCAGAGCAACAAAAGGCTAAGTAGCTAA---CATCTTTGATT
TCCACTTTTCACTGCAGGCTAATTTCAAGGTGAGGGCAACCATCATCATGGCAACGTTTTTCTCCCTGACCGCACCCGTG
GGCATCGTGCTAGGGATTGCGATTTCATCTAGCTATAATGTGCATAGCTCTACTGCCTTCATTATTGAGGGAGTCTTCAA
CTCAGCCTCGGCAGGGATTTTGATCTACATGTCCCTGGTGGACCTTCTAGCAACAGATTTCAATAACCCAAAGCTACAGA
CAAATACAAAGCTTCAGCTGATGACATATCTTGCACTTTTCCTAGGTGCAGGGATGATGTCCATGCTTGCCATATGGGCA
TAGAGATCTTCAAAGCAATTGCCAAATTTGCACTTGTATTTCCTGCTA------AAGTTGAAGTATGCATTGTATTCATC
CAGGAGTTCTCCATTTCCCC-AAAATAATACACCCTTGGTGAAAAATTAACCATATTCATCCATTAATTTTTTGTCTCTC
AAAACAACATACTCTTGGATATTCTCTTTGCATGTCATA-------------GTATGAGACTGTGTGATGAGTTGATGTC
AGACCTAACTTTGAAGCCGTATAAGTGATCAGTTATACAGTAGGTTTCGGACTTTCTAAATTTCGATCAGCTGAGTCTCT
CACACTAACAATGAATCTGCATGCGTATTTTTCCAAGAGTAAAATACATGCGCGGTCCTAATTCTTTTGCGAAAATGTCA
AGTAAGTCCCAAATCTATGAAAATGCACATCGCAGTCCTAAATCTTTTGTAAGTGGTTCATGGGAGGTCCTATTGACCTC
-GACCCTGTTGACCGACTGGTGTGGCGCTTTGACCACTTCCATGTAAGCACTATTTTGCACAGAACCCTCTGCGAAGTCA
TATCTTCTAAGTTCATGGCCCTCTTGATGCAACTCGGCACTGCAGTAAACCAATC--AAAATGCATGGA-----------
-------------------------------------------------ACTCGCAGCGCTGCTCCTGCTTGTTCCCTTC
GCCGGCCTTCTCTACCTCGGGTTCTGAAAGAAGAAACGCGAAGACGACAGGGACTTG-----------------------
-----------------------------------------------------------GCACGGCGCCTCTCCCTCCGG
CTCCTCGGCCGGATCCCCGCGCTCT-------------------------------------------------------
---------------------------------ACCAAGTTGATGTGCGTGCATGGCGCACTCGCCCAGTTTACGCAGGA
GCAATTAGTGTCGGCTGC--CGAGGTAGTGGGCCCGTCGTCCTCGGGGGCCACTGCTCGAGCGCCCAGCTGCTAGCACCG
CTCCCGCCGTGCCATGGCCGCTGCGTGCACGGTGGCCGAGCACACAACAGCTCGGTCACTGGGACTG-------------
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----------------------------------------------------------------------GGTCACGCCG
ACCATTCTCGAGA-CCCTGTTCCTCCCTATTCGAGCTCTGCTCCTTCGTCAGGAACCTCCCA
>chr2B_1
AGAGATTCTTTGTACTGTCGATCTTATCAACTTTGGATTGGGATTTGGGAGGAGGAGAAGGCCCCGGCTGTGCGCCAAGG
TCAGTGGAACTATCTCACGTCCTTTGATGATTGTGACCCAAGAAAAACCAACGGCAGCGAAAAGAGCCCAGCGAACATG-
--------GCGTGCATTTTGGCCCCTTCGTACAGGGAACATTGGCTCATTCCATGGCCAACGCCTCCATTGGCTAAGGAT
GGATGTCGTGTGATCTCGGCCGTCCGATTCGGGTTCCATTCATGTGCGGCAGGAATATGT-----CAGCCAACTTTGACA
GCTTGCA-----------CACCTT-TTACCTCACACCGGTTGCCCAAAGCCTCTCGAT--GGTCAAT----CTGGCCGAA
CCCGCACAACCGAAAACATCAGCAAGCAGACTCCTATAAAAGACTGACCTGACCGATGACGACATTGTGTCAACACTGCA
CTAAAACCGACCAGAAAAGCGCATCACCTCCCCCGGATTAATG-AAATCCTCAGCCGCCATCGGCCAAGCACACCTTCCT
TCCCTATACACATAAC--------------------------AATTGAGAATAAGGCCCGAGGCCCCTATCTGACTTCGT
CGATCCAGTGATCGGCGACGAGGCACGCCAGCAAGGCGACATGGCAGCCGTCACCGGAGGAAGAAATCCAGGTTTCAGAC
AGCAGGGCCGAAGGCTGGTGACCATGGATGAAAACAGGTTTCAACTTAGCCCGTGGATCCTGGATGGAAACATCTCCCAA
AAGTGCAGAGAATCCAGCTCCCGGATACCATGTCATTAAAGCATCAGC--------------------------------
-CATCAACGACACTTTGCACCGAGGTTAGCGACACATGGCACATATGATGTGCAG-CCCCGGGAGCACCAGACCCCACCT
GGACAAAGGACAGCAGCCCTCCTCGCCCCGACGCCTCCTATATTTAAAGTACCCAGCGTTGGCTCTTGCTCTATATCTCC
CTGCAGTAGACATCGCATTCAGGCACACATAATCAGCAATTCAGCAGAGTCGCCACCATGGGC--GCCACCAATCATACC
TTGCAAGCGCTGCTCCCATGGCTCCTCCTGTTCGTGCAGCAGGCCGCCGCGGCCAGCGGCGGGTGCGAGTGCACGACCGC
CACGGACGGGGCGGACAAGCAGGGCGCGATGAAGCTGAAGCTGGTCGCCATCGCGTCCATCCTCACCGCCGGGGCGGCTG
GCGTGCTGGTGCCGGTGCTCGGCCGCTCCATGGCCGCGCTGCGCCCCGACGGCGACATCTTCTTCGCGGTCAAGGCGTTT
GCCGCTGGCGTCATACTTGCCACCGGCATGGTGCACATCCTGCCGGCGGCGTTCGACGGGCTCACCTCCCCGTGCATCCA
CAAAGGCGGCGGGGACAGGAACGGCTTCCCTTTTGCCGGCCTTGTGGCCATGTCTGCAGCCATGGCCACAATGGTGATAG
ACTCGCTGGCTGCTGGGTACTACCGCCGGTCTCACTTCAGCAAGGCGCGCCCACTTGACAACATTGACATGCCCG-----
----GAGATGAGGAAGGGAGGGCCGATCATCCACATATGCACGCGCATGGCCATTCACATGGTGAGGCAATTGTTGTCAG
CTCACCGGAGGAGGCGGCGATAGCTGACACAATCCGGCACAGGGTGGTATCTCAGGTAAGTA--------------A---
-----------AAGCACATAGGACTTCCTGGCAACAGTAATTGGAGGTTAGTTCCATAACTTCCCGTATACCAGAAAAAT
AGTGAATCTTAAAACGATGGGAGCATGAAAGAAGCAACTT---TAAATATACTCAAATACATTAGCTTTTCATGAACATG
AATAAAGATGACGTAGTGGAAATGTGAACTACATCAGCACATAATGTTCCAAAATATCTCATCTGACCAAACTAATATCT
ACACAGAACAATTTCAGAGCAGAACCAAAAGGCATAGTGGCAGGTTAAATAATTCTCCAAGGTCAATTTGGCATCTCTCT
CAAAACCTTTCCATAAAGAAACACAAATAAACAGGG-ATGGGAATGAGGAGATCAATACCTATTCGAAAGGTCTGGCAGT
TCGCGGTTTACTCCTTTAGGGCAAACTTTTCCTCTTC-AATAAAGAATCCAGTTCCTCCGCAAACTGTTTGCCAAGTTGG
TAGATATTTTGGAGAACCAACCAGTCCCGTGTTAAATAACCATAAATTTACCATCATGCAGGTTCTAGAGCTGGGAATCT
TGGTGCATTCAGTGATAATTGGTGTGTCATTAGGAGCATCTGTGAGGCCATCCACCATCAAGCCTCTGGTCGGTGCCCTC
AGCTTCCATCAATTCTTTGAAGGCATAGGCTTGGGTGGTTGCATTGTACAGGTACCTGCTTGCACTGATAAGAATCTAAC
TAGTTTTCCTGCCTCCATTTTACAATATGATACCACCAAGGTAAAAAGACAATTATAAATCAACATGTCTGG----CTAT
ATATATACACTCATAGAAGGGGAGGAAAAACAAA----GGATAATGATAATATTAAGTTTAAATCAAATGAATACACACT
GATAATTTTCTTCTAAAAATAATCAACAAATT--ATATACAATAGCTATTGATAATTGAACTTTTCAGGGAGAAAATAGG
AAGTAACTAGTTTGAGAACTGATATTCCAGTCGTAAAGACATAAGCTAAAGTAAGAAAAGATTCTGAAGAAAGCAAACAA
ATGACACAGAGGATAAAGAACCAACTTTATAAAGTGGTCCATAGCAACAAAAGGCTAAGTGGCTAATAACATATTTGGTT
TTCACTTTTTCC-GCAGGCTAATTTCAAGGTAAGGGCAACCATCATCATGGCAACGTTTTTCTCCCTGACCGCACCCGTG
GGCATCGTGCTAGGGATTGCGATTTCATCTAGCTATAATGTGCATAGCTCTACTGCCTTCATTATTGAGGGAGTCTTCAA
CTCAGCCTCGGCAGGGATTTTGATCTACATGTCCCTGGTGGACCTTCTAGCAACAGATTTCAATAACCCAAAGCTACAGA
CAAATACAAAGCTTCAGCTGATGACATATCTTGCACTTTTCCTAGGTGCAGGGATGATGTCCATGCTTGCCATATGGGCA
TAGAGATCTTCAAAGCAATTGCTAAATTTGCACTTGTATTTCCTGCTA------AAGTTGAAGTATGCATTGTATTCATC
CAGGGGTTGTCCATTTCCCC-AAAATAATACACCCTTGGTGAAAAATTAACCATATTCATCCATTAATTTTCTATCTCTC
AAAAGAACATACTCTTGGATATTCTCTTTGCACGTCATATAGTATGAGACTGGTATGATACTGCGTGATGAGTTGATGTC
AGACCTAACTTTGAAGCCATATAAGTGAACGGTTATACAGTAGGTTCTGGACTTTCAAAATTTAGATCAGCTGAGTCTCT
CACACTAACAACGAATCTGCATGCATATTTTTCCATTAGCCAAAAGGAACAAAAAGAAAA--------------------
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---------------------------------------------AAGAACTAGTTTGTTTAGATCGATAGTTCAAAACC
CTTAAAAAAAGACTGCCAGGAGAAATTCAACGCTTCAGAAAAGATGTAAAATTTTCAAAAATTAAGAGGGCTCCATGATT
TATCCACAGTTATATATGCTCCTGTGAGAAAACCACATGTAACACACTTACACGCAAGATTGCTACTTCTTCGAGTTCTT
TCACTCATATATGCTTTTGTGAGAAAGCTTCCCAAAAGATTCACGTCCTTCATGATGAAGTCAAAGACAGCACATAAAGA
ACCTATTCTGTTTCGCGACATAAAATTTATTGATTATTTATTTACAGTGAAACCAAGATGCATTTTCTCCTTCCATCCAG
CTCCACTGATTGTTCCCAAATCCCAATTACTTCTTGGTTAAATTAAATAACTAACAACAATTTAACTCAAAAGTAACTAG
TCAAAAGAGAGAAATTGTTTGACATACGAACAAACCAAGTTGATAAAGATAGATCTGCTTAAATTACTTGCTAAAGAAAA
ATCTGACAGAATTAGTAAAGGTAGGGCCTGAATTATATCAGAATACTCTTTCTGAACATCATAACGAAGTTAACAAGCTG
AATACAACATCTTCTTATATGTGATAATTGGTACATAAGTTTCATCTTCATATAGCTCCATAGTTCTCAAAATCTACTTC
GTTTTTTTCTGGTCCATTGTTAGAATATGATAACAGGAAGGTACAACTTGTTCAAAAAGACAATTCCAAATCAACATGTC
AGAATATACTCGCAGAAGGGGATGAAGAATAAGAGATAATTATAATATTAAGTTCAAATTAAATGGTTCCCTGATAGCAA
CATGAGTATGAGACATTACACGCATGAAACAATACTGATAATTTTCTTCCAAAACTAATCACAACAATATATCCAACATG
TATTGTTAATTGAACTTTTCAGGGAGAAAGTACAAAGTAATGAATTTGAAAACTGATATTCTAGTCCTAATGACATGTCA
TTTTACCAAAAGCTAAAGTAAGCAAAGATTCTGAAGAAAGCAAACAAATGAAACAGAGGAAAAACAAATAAAGTGTTCAG
TGTTCCACAGCAACAAAAGGCTAAGTGGCTAACATCTTTGATTTTCACTTTTTCCTGCGGCTAATTTCATGGTAAGGCTA
ACCATCACCATGACAA-TGTTTT---------------------------------------
>chr2A_25
------------------------TATCAACTTCGGATCGGGAGGAGGGGGAGAGAACAGCT--TGGCTGCGTGCCAGGG
TCAGTGGAACTATCTCACCTCCTC--ATGATCGTGACCCAAGACAAAC----GGCGGTTAAAGGCGCCCAACGAC-----
---------CGTGCATTTTGGTCCCTTCGTACAGGGAGCTCCGGCTCGTCCCATCGCCGGCACTTCCACTGGCCAGGGAT
GGGCGCCGTGCGATCTCCGCCGTCCGATTCG-GTTCCATTCGTATGCGTCACGAATACAGTCCCCCAGCCAACTTGACAG
CTCCCTCCCTCCCTCCATCCCCTT-TTACTTCCAGCCGGCCGCTCAAAGCGTCTCCAATGGGTCAAT----CTCGCCGAA
CCTGCACCACCGAAGACACCAGCAATAAGACTCCTGAAAAAGCCTAATCTGACCGATGACGACATTGTGTCAACACTGCA
CTAAAACGACCAG--AAAGCACAACGCCTCCTCCTGATTTATTAAAACCCTCAGCCGCCATCGGCCAAACAAACCTTCCT
TGACAGCACTACCAGGTGTC------------------------------------------ATCCGG------TTTCCT
CCATCCCCGATCAACGACGCCC---------------------GCAGCCATCACCGGACAAAGAAATTCAGGTTA-----
----------------GGTGGCCATGGATGGAAACAAGTTTCAA-------------TCCGGGATGGAAAAATCTCTCGA
AAGTGCAGAGAATCCAGTCTCCGGATACCATGTCATTTGAGCATCCA---------------------------------
GCATCAACGACACTTTGCACCGAGGTTAGTGACACATGGCACATATGATGTGCAG-CCCCGGGAGCACCAGACCCCACCT
GGACAAAGGACAGCAGCCCTCCTCACCCCGACGCCTCCTATA-TTAAAGTGCCCAGCGTTGGCTCTTGCTC--TATCTCC
CTGCAGTAGACATCGCATTCAGGCACACATAGTCAGCAATTCAGCAGAGTCACCACCATGGGC--GCCACCAATCATACC
TTGCAGGCGCTTCTCCCATGGCTCCTCCTGTTTGTGCACCAGGCCGCGGCGGCCAGCGGCGGGTTCGAGTGCACGACCGC
CACGGACGGGGCGGACAAGCAGGGCGCGACGAAGCTGAAGCTGGTCGCCATCGCGTCCATCCTCACCGCCGGGGCGGCTG
GCGTGCTGGTGCCGGTGCTCGGACGCTCCATGGCCGCGCTGCGCCCCGACGGCGACATCTTCTTCGCGGTCAAGGCGTTC
GCCGCTGGCGTCATCCTTGCCACTGGCATGGTGCACATCCTGCCGGCGGCGTTTGACGGGCTCACCTCCCCGTGCATCTA
CAAAGGTGGCGGGGACAGGAACGGCTTCCCTTTTGCGGGACTTGTGGCCATGTCTGCAGCCATGGCCACAATGGTGATAG
ACTCGCTGGCTGCTGGGTACTACCGCCGGTCTCACTTCAGCAAGGCACGCCCACTTGACAACATCGACATACCCG-----
----GAGATGAGGAAGGGAGGGCCGATCATCCACATGTGCACGCGCATGGCCATTCACATGGTGACGCAATTGTTGTCAG
CTCACCGGAGGAGGCTGCCATAGCTGACACAATCCGGCACAGGGTGGTATCTCAGGTAAGTAAGAGCAGCCACTCCA---
-----------AAGCACATAGGACTTCCTGGCAACAGTAATTGGAGGTTAGTTCCATAACTTCCCGTATACCAGAAAAAT
AGTGAATCTTAAAACGATGGGAACATGAAAAAAAGTAACTTTATAAATATACTCAAATATATTAACTTTTCATGAACATG
AATAAAGATGACGTAGTGGAAAGGCGAACTACATCAGCACATAATGTTCCAAAATATCTCATCTGACCAAACTAATATCT
ACACAGAACAATTTCAGAGCAGAACCATAAGGCATAGTGGCAGACTAAATAATTCTCCATGGTCAATTTAGCATCTTGAT
CAAAACCTTTTCATAAAGAAACATAAATAAACAGGG-ATGGGAATGAGGAGATCAATACCTATTCGAAAGGTCTGGCAGT
TCGCGGTTTACTCCCTTAGGACAAACTTTTCCTTTTCAAATAAAGAATCCAGTTCCTCCGCACACTGTTTGCCAAGTTGG
TAGATATTTTGGAGAACCAACCAGTCCCGTGTTAAATAATCCTAAGTTTAACATCATGCAGGTTCTAGAGCTGGGAATCT
TGGTGCATTCAGTGATAATTGGTGTGTCATTAGGAGCATCTGTGAGGCCATCCACCATCAAGCCTCTGGTCGGTGCCCTC
AGCTTCCATCAATTCTTTGAAGGCATAGGCTTGGGTGGTTGCATTGTACAGGTACCTGCTTGCACCGACAAGAATCTAAC
TTGTTTTCCTGCCTCCATTTTTTAATATGATACCACCAAGGTAAAAAGACAATTATAAATCAACATGTCAGGATATATAT
ATATATACACTCACAGAAGGGGAGGAAAAA--AA----GGATAATTATAATATTAAGTTTAGATCAAATGAACACAGACT
GAGAATTTTCCTCTAAAAATAATCAACACATATAATATACAACAGCTATTGATAATTGAACTTTTCAGGGAGAAAATAGG
AAGTAACTAGTTTGAGAACTGATATTCCAGTCCTAAAGACATAAGCTAAAGTAAGCAAAGATTCTGAATAAAGCAAAAAA
ATGAT--AGAGGATAAAGAACCAACTTTATAAAGTGGTCCATAGCAACAAAAGGCTAAGTGGCTAATAACATCTTTGATT
TTAACTTTTTCC-GCAGGCTAATTTCAAGGTAAGGGCAACCATCATCATGGCAACGTTTTTCTCCCTGACCGCACCCGTG
GGCATCGTGCTAGGGATTGCGATATCGTCTAGCTATAATGTGCATAGCTCTACTGCCTTCATTATTGAGGGAGTCTTCAA
CTCAGCCTCGGCAGGGATTTTAATCTACATGTCCCTGGTGGACCTTCTAGCAAAAGATTTCAATAACCCAAAGCTACAGA
CAAATACAAAGCTTCAGCTGATGACATATCTTGCACTTTTCCTAGGTGCAGGGATGATGTCCATGCTTGCCATATGGGCA
TAGAGATCTTCAAAGCAATTGCCAAATTTGCACTTGTATTTCGTGCTGAAGCTGAAGTTGAAGTATGCATTGTATTCATC
CAGGAGTTCTCCATTTCCCAAAAAATAATACACCCTTGGTGAAAAATTAACCATATTCATCCATTAATTTTCTATCTCTC
AAAACAACATACTCTTGGATATTCTCTTTGCATGTCATA-------------GTATGAGACTGTGTGATGAGTTGATGTC
AGACCTAACTTTGAAGCCGTATAAGTGATCAGTTATACAGTAGGTTTCGGACTTTCTAAATTTAGATCAGCTGAGTCTCT
CACACTAACAACGAATCTGTATGCATATTTTTCCAA--------------------------------------------
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>chr5A_3391
ATGCGATCATTTTC------------------------------------------------------------------
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-------------------------------TCAAAGAGTAAAATACATGCGCGGTCCTAATTCTTTTGCAAAAATGTAA
AGTAAGTCCCAAATCTATGAAAATGAACATCGCAGTCCTAAATCTTTTGTAAGTGGTTCATGGGAGGTCCTATTGACCTC
TGACCCTGTTGACCTACTGGTGTGGCGCTTTGACCACTGCCATGTAAGCACTATTTTGCACAGAACCCCCCGCGAAGTCA
TATCTTCTAAGTTCATGGCCCTCTTCATGCAACTCGGCACTGCGGTAAACCAATC--AA--TGCATGGA-----------
-------------------------------------------------GCACACAGCGCTGCTCCCGCTTGTTCCCTTC
GCCGGCCTTCTCTACCTCGGGCTCTGAAAGAAGAACGGCCAAGACGATGGGGACTTG-----------------------
-----------------------------------------------------------GCACGGTGCCTCTCCCTCCGG
CTCCTCGGCCGGATCCCCGCGCTCT-------------------------------------------------------
---------------------------------ACCAAGTTGATGTGTGTTCATGGCGCACTCGCCCAGTTTACGCAAGA
GCAATTAGTGTCGGCAGCCGCGAGGTAGTGGGTCCGTCATCCTCGAGGGCCACTGCTCGAGCACCCAGCTGCTAGCACCG
CT------------------------------------------------------------------------------
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>chr2B_3396
TATTA---------------------------------------------------------------------------
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------------------------------TTCAAAGAGTAAAATGCATGCGCGGTCCTAATTCTTTTGCAGAAATGTCA
AGTAAGTCTCAAATCTATGAAAATGCATATCACAGTCCTAAATCTTTTGTAAGTGGTTCATGGGAGGTCCTATTGACCTC
TGACCCCGTTGACCGACTGGTATGGCGCTTTGACCACTGCCATGTAAGCATTATTTTGCATAGAACCCCCCGCGAAGTCA
TATCTTCTAAGTTCATGGCCCTCTTCATCCAACTCGGCACTGCAGTAAACCAATC--AA--TGCA---------------
-------------------------------------------------------AACGCTGCTCCCGCTTGTTCCCTTC
GCCGGCCTTCTCTACCTCGGGCTCTGAAAGAAGAACGGCGAAGACGACAGGGACTTG-----------------------
-----------------------------------------------------------GCATGGCGCCTCTCCCTCCGG
CTCCTCGACCGGATCCCCGCGCTCT-------------------------------------------------------
---------------------------------TCCAAGCTGATGTGCGTGCATGGCGCACTCGCCCAGTTTACGCAGGA
GCAATTAGTGTCGGCCGCCGCGAGGTAGTGGGCCCGTCGTCCTCGGGGGCCATTGCTCGAGCGCCCAGCTGCTAGCACCG
CTCCCGCCGTGCCATGGCCACTGCGTGCACGGTGGCTGAGCACACAACAGCTCCGTC------ACTG-------------
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----------------------------------------------------------------------GGTCACGCCG
ACAATTCTCGAGA-CC-TGTTCCTCCCTATTCGAGCTCTGCCCCTTCTTCAGGATCCTCCCA
>chr2B_3405
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----------------------------------AAGAGTAAAATGCATGCGCGGTTCTAATTCTTTTGCAGAAATGTCA
AGTAAGTCCCAAATCTATGAAAATGCATATCACAGTCCTAAATCTTTTGTAAGTGGTTTATGGGAGGTCCTATTGACCTC
TGACCCCGTTGACCGACTGGTATGGCGCTTTGACCACTGCCATGTAAGCACTATTTTGCATAGAACCCCCCGCGAAGTCA
TATCTTCTAAGTTCATGGCCCTCTTCATCCAACTCGGCACTGCAGTAAACCAATC--AA--TGCA---------------
-------------------------------------------------------AGCGCTGCTCCCGCTTGTTCCCTTC
GCCGGTCTTCTCTACCTCGGGCTCTGAAAGAAGAACGGTGAAGACGACAGGGACTTG-----------------------
-----------------------------------------------------------GCACGGCGCCTCTCCCTCCGG
CTCCTCGACCGGATCCCCGCGCTCT-------------------------------------------------------
---------------------------------TCCAAGCTGATGTGCGTGCATGGCGCACTCGCCCAGTTTACGCAGGA
GCAATTAGTGTCGGTCGCCGCGAGGTAGTGGGCCCGTCGTCCTCGGGGGCCATTGCTCGAGCGCCCAGCTGCTAGCACCG
CTCCCGCCGTGCCATGGCCACTGCGTGCACGGTGGCTGAGCACACAACAGCTCCGTC------ACTG-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------------------------------------------GGTCACGCCG
ACAATTCTCGAGA-CC-TGTTCCTCCCTATTCGAGCTCTGCCCCTTCTTCAGGATCCTCCCA
>chr5A_3406
--------------------------------------------------------------------------------
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-----------------------------------AGAGTAAAATACATGCGCGGTCCTAATTCTTTTGCAGAAATGTCA
AGTAAGTACCAAATCCATGAAAATGCACATCGCAGTCTTAAATCTTTTATATATGGTTCATGGGAGGTCCTATTGACCTC
TGACCCTGTTGACCGACTGGTATGGCGCTTTGACCACTGCCATGTAAGCACTATTTTGCACAGAACCCCCCGCCAAGTCA
TATCATCTAAGTTCATGGCCCTCTTCATGCAACTCGGCACTGCAGTAAACCAATC--AA--TGCATGGA-----------
-------------------------------------------------GCTCGCAGCGCTGCTCCCGCTTGTTCCCTTC
GCCGGCCTTCTCTACCTCGGGCTCTGAAAGAAGAACGACAAAGACGACAGGGACTTG-----------------------
-----------------------------------------------------------GCACGGCGCCTCTCCCTCTGG
CTCCTCGGCCGGATCCCCGCACTCT-------------------------------------------------------
---------------------------------GCCAAGTTGATGTGCGTGCATGGCGCACTCGCCCAGTTTACGCAGGA
GCAATTAGTGTCGGCCGCCGCGAGGTAGTGGGCCCGTCGTCCTCGGGGGCCACTGCTCGAGCGCCCAGCTGCTAGCACCG
CTCCCGCCATGCCATGGCCGCTGCGTGCACGGTGGCCGAGCACACAACAACTCTGTCACTGGGACTG-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------------------GGTCATGCCG
ACCATTCTCGAGA-CC-TGTTCCTCACTATTCGAGCTCTGCCCCTTCTTCAGGATCCTCCCA
>chr3D_3407
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------------------------------------GAGTAAAATACATGCGCGGTCCTAATTATTTTGCGAAAATGTCA
AGTAAGTCCCAAATCTATGAAAATGCACATCGCAGTCCTAAATCTTTTGTAAGTGGTTCATGGGAGGTCCTATTGACCTC
-GACCCTGTTGACCGACTGGTGTGGCGCTTTGACCACTTCCATGTAAGCACTATTTTGCACAGAACCCCCTGCGAAGTCA
TATCTTCTAAGTTCATGGCCCTCTTCATGCAACTCGGCACTGCAGTAAACCAATCAAAA--TGCATGGA-----------
-------------------------------------------------ACTCGCAGCACTGCTCCCGCTTGTTCCCTTC
GCCGGCCTTCTCTACCTCGGGTTCTGAAAGAAGAAACGCGAAGACGACAGGGACTTG-----------------------
-----------------------------------------------------------GCACGGCGCCTCTCCCTCCGG
CTCCTCGGCCGGATCCCCGCGCTCT-------------------------------------------------------
---------------------------------ACCAAGTTGATGTGCGTGCATGGCGCACTCGCCCAGTTTACGCAGGA
GCAATTAGTGTCGGCTGC--CGAGGTAGTGGGCCCGTCGTCCTCGGGGGCCACTGCTCGAGCGCCCAGCTGCTAGCACCG
CTCCCGCCGTGCCATGGCCGCTGCGTGCACGGTGGCCGAGCACACAACAGCTCGGTCACTGGGACTG-------------
--------------------------------------------------------------------------------
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----------------------------------------------------------------------GGTCACGCCG
ACCATTCTCGAGACCC-TGTTCCTCCCTATTCGAGCTCTGCTCCTTCTTCAGGAACCTCCCA
>chr3B_3407
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------------------------------------GAGTAAAATACATGCGCGGTCCTAATTCTTTTGCAGAAATGTCA
AGTAAGTCCCAAATCTATGAAAATGCACATCGCAGTCCTAAATCTTTTGTAAGTGGTTCATGGGAGGTCCTAATGACCTC
TGACCCTGTTGACCGACTGGTGTGGCGCTTTGACCACTGCCATGTAAGCACTATTTTGCACAGAACCCCCTGCGAAGTCA
TATCTTCTAAGTTCATGGCCCTCTTCATGCAACTCGGCACTGCAGTAAACCAATC--AA--TGCATGGA-----------
-------------------------------------------------GCTCGCAGTGCTGCTCCCGCTTGTTCCCTTC
GCCGGCCTTCTCTACCTCGGGCTCTGAAAGAAGAACGGCGAAGACGACAGGGACTTG-----------------------
-----------------------------------------------------------GCACGGCGCCTCTCCCTTTGG
CTCCTCGGCCGGATCACCGCGCTCT-------------------------------------------------------
---------------------------------GCCAAGTTGATGTGCGTGCATGGCGCACTAGCCCAGTTTACGCAGGA
GCAATTAGTGTCGGCCGCCGCGAGGTAGTGGGCCCGTCGTCCTCGGGGTCCACTGCTCGAGCGCCCAGCTGCTAGCACCG
CTCCCGCCGTGCCATGGTCGCTGCGTGCACGGTGGCCGAGCACACAACAGCTCCGTCACTGGGACTG-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------------------GGTCACGCCG
ACCATTCTCGAGACC--TGTTCCTCCCTATTCGAGCTCTGCCCCTTCTTCAGGATCCTCCCA
>SNPs
-----------S----S---------------------------------------------------S-----------
----------------------S-----------------------------S--------------------------S
SSSSSSSS------------------------------------S----------------------------------S
-----------------------------------------------------------------------S--------
------------------------S-------S--------------S-------------------SSSS---------
-------------------S--------------------SS-SS-S-SS------------------------------
-----------------SSSSSSS--------------------------------------------------------
S----S-SS-S---S--SS-SSSSSSSSSSSSSSSSSSSSSS----S-----S------SSS-----S------------
-------------------------S------SSSS-SSS----------------------------------------
-----------S--------------------------------S--S-S------------------------------
-----------------------------------------S----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
-------------------------------------------S-S---------S------------------------
---------------S-S-----------SS-----------------------S-------------------------
------S-S-S---S---------SS-SSS-----------------------SS-SSSSS-SSS--S-----S--S---
--------------------------------------------------------------------------------
---------------------------------------------------------------S----------------
--------------------------------------------------------------------------------
--S--S--S-----------------------------------S-----S-----------------------------
------------------S-------------------------------------------------------------
---------------------------------------------------------------------------SSSSS
SSSS----S---------------S-------------------------------------------------------
------------------S----------------------------------------------------------SSS
SSSSSSSSSSS---------------------------------------------------------------------
--------------S----------------------------S------------------------------------
--------------------------------S-----------------------------------------------
--------------------------------------------------------------------------------
------------------------------------S-----------S-------------------------------
--------------------------------------------------------------------------------
-----------S----------------------------------S--S-----------------------------S
----------------------S---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------SSSS---------S------------------S---------S---
---S---------------S----------S-------------------------------------------------
----SS------S------------------------------------S------------------------------
-----------------------------------------S------------------S-------------------
-S-------SS-S------------------S------------------------------------------------
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-----------------------------------------------------------------------S-S------
--------------------------------------------------------------------------------
---------------------------------------------------------------S----------------
-----------S------------S-------------------------------------------------------
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-------------------------S------------------------------------------------------
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----------------S------------------------------S--------------
>forward_595
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---------------GTACCCACGCTGGATTTTGC---------------------------------------------
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>reverse_2252
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-----------AAGAACCAACCAGTCCCGTG-------------------------------------------------
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--------------------------------------------------------------
>forward_859
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---------------------------------------AGTATCACGCATCAACCCCC---------------------
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>reverse_2882
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-CCACTTTTCACTGCAGGCTA-----------------------------------------------------------
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--------------------------------------------------------------
>forward_1049
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---------------------------------------------------------------------GCTCTATCTCC
CTGCAGCAC-----------------------------------------------------------------------
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>reverse_2912
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-------------------------------GAGGGCAACCATCATCATGG-----------------------------
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>forward_1602
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--------------------------------------------------------------ATCGACATACCCGAACAC
GC------------------------------------------------------------------------------
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>reverse_3504
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---------------------------------------------------------------CGATCAGCTGAGTCTCT
CACA----------------------------------------------------------------------------
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--------------------------------------------------------------
