>input_sequence_38324
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------------------------------ACAGGACAGAGAGGCGACAATAG-ATT--CACGCTCTGACCACACTTTGA
TCTGATCTATTCGGTACCTGACAGAGCCGTGGTAGCTCAAGCTCGCTGCCGGCATGGAGGTGGATGGCAAGAAGCCGTAC
GTCATCGCCGTGATCATACAGGTCATCGCCACCGGCATGCTCGTCACCTCCAAGGCGGCGTACAACCAGGGGTTCAACAC
CTACGTCTTCGTCTTCTACCGCCAGGCCGCCGCGTCTCTTCTCTTGCTGCCTCTCGCCATTGTCCTCGAAAGGTACTGCC
TCAGAGCTAGCTATCTAT--CTGGTACTATTTGAGATATACTTC-----TAGCAACGGAACCATGCATGCAAGTAAGGTC
GATGATGAGTTGCAAACTGATTCCCAGGAAAAACATGCGGTTAATGTCGTTCCGGTTGCTCATGAAGCTGTTCCTCTATG
CCTTATTCGGGTAAGACGGCAAGTAAGCAACGCATGAAGTAAATTGCAAAAAATCATCACAATTGGCTCAAAGTTATCAA
TGCTTCAGGAAAAAGCCATCGGAAAACATGCATTTTGGTGGGTGTTTGATGACTTTTGCGCAATTGTGGTGGTTTTTTGC
AATTTACTCATCGATTGCGGCACCTAATTAGCTGTT--TATGTATGTGCAACAAATAGGAGATGA------ATGACTGAT
AGATATTTT--------------CAGGACTACATTTAGCTTGAACCTGTACAACGTGAGCCTCAAGTTAACATCTGCTAC
CGTGGGGTCTGCGACCAGCAACTCCATGCCCGTGGTCACCTTCATCATAGCGCTACTGCTGAGGTAAGAACTAG------
---TTGATCCGGCCAACTACTATTATATGATTATACTACTCTCTGTTTCATAATAATTGAACTAGAACCAGGACAAG---
----------------------------AATTATGGAATAGAGGGAGTACTAAAGTTAATCAGTAGTAGTAGTAGTAGTA
GTAGTAGTAGTACATACCT-AGTGACTTGTACACTTGGCCGC----AGGATGGAAGTGGTGAAGCTGAGGAGCCCCTCGG
GCATGGCGAAGGTGGCCGGAGTCGTGCTCTGCCTCGCCGGGGTGCTCGCCATCGCCTTGTACGTGGGTCCGTCCCTGGAC
CCGGTGAACCACCACCGCGCCTTTGCTGCCGCAAACGGGGAGGCTGATGCGAAGAGGGGGACGTGGATCATGGGCACGTT
GCTCATGGTGCTCGTCAACGTGACGTGGTCCCTGTGGATCGTCCTGCAGGCCGCGCTGCTCAAGGAGTTCCCCCACAAGC
TGCTCGTCACGGCCACGCAGTGCGCCTTCAGCGCGGGCCAGTGCTTCGTCGTCGCGGCGGTCGCCGAGAGGGACTTCTCC
CGGTGGCAGCTAGGGTTCGACGTCACACTGGTCGCCGTCCTCTACACCGTAGGGCT---TCCCAATTATCTGTCTTGATA
ATG-CTGCCA-------A--------------TGGATGTATGCATGGAGTGGTGGACTTATGTATGCATGGTTCAAAAAT
TCAGGGGTTTGTGGTGACGGGAGTGTCGTACTACCTGCAAGCATGGTGCGCGGACATGAGAGGGCCGGTCTTCCTCGCCG
TGTGGAACCCGCTCTGCTTCGTCTTCACCATTTTCTGCTCCTCCTTCTTCCTCGGAGAGATTGTTCACCTCGGCAGGTAC
GTGACGATTTGACATCGAAGATCT-----TTCAACTGCACAACTGGTCTATCAGTCTATCCTTGCAAAACTCCACTTCAT
TTATTCTTCTTTTTCATTAATTTTGGCAGTATCTTGGGTGGAATTCTTCTCGTTGGAGGTCTGTACAGCGTGCTGTGGGG
TAAAAGCAAAGAGATTCGGACTGCGCCATGTGATGAGCCGATTATGAT---CCATGGCGTGGGGGACGATAAATCTGCGG
ATGAGGAGGAGAAGAATGTTATTAGGAGCAGAGAAGTTAATGGGGAGATGGAGCACGATAAAGAAGCAACCATATCGCCT
GCTGAACAAGTCTAAATTCATCGATTGAAGGAGGCTCCATCT-TC----TCATGGGATGCATCCATTATTCGAGTAACCG
TGGACTCTGTCCAATTTAAACCACGGAGCAGGGTAACAGAAAAATAGGCTGTATTAAA----------------------
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>chr2A_1_TraesCS2A01G505300
TACGTCACCACACTGTCCAATGATAGACCAATTATCTCACTCGCTTGGAAGAAGCGGGTGGTACTCCTAC----------
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-----------------TATACTTAAAACAAAGGCTTAATG-TAATGATTAGTGGGCAGCAAGCACGAGACTACTTAATT
ATGCTTAGAAAGATTGCATGTATCGATCGACAGGTCGGGAGCACAACATGTGGCACGAGGGATTGTTAATTTGACTTTCC
TAGCTAGACTTGACTGGCTGCTTACAAGATCGCCTTTCTTTT-CTGCGAAATCTTACTAAGTAGCAAGTATACTTAACAG
CGTGAAC-AATCACGCACATCAGTGTGACCAAGTTCACACTTGAGTCGGCATGCACGCAGATAAACCATGGAGCATGCAT
GTTTGTGTTGTTACTGAGACAGACCCTGATATGAGTTTGCTCGGATTTGCTCTCCAGGGTGAAAACTAAAAATCTAATCT
TCGTGCATGGATCTAACGCTGTAACGCGTCGTTGCTGAAGCACTTTACTCATAGTCCGAGTGCTGTCAACGGTGGAATTT
GATGTTGATGCTGGTTGCTACCGTATGCTTTAGTTTGGCACTTCGACAGGACTTTTGAGGGTCACGTTTTTTCCTTTTTG
TCATTTGCGTGTGCTTTTGTGTTGGTTGTGTGTATCCTCATCATGTAGAAACCGGGTGCATATCCATAATACTTGTATTC
TCTTGATATGACGTTATGGGTTAATAACCATACCCTTTATCAGAAAGAAAAACCGTGTTG-----------------AGC
CAAAGAAAATCAGATCGACTCAAGACGGT-AATGGCTAGGATTATATTCATGTTTACTAGATCTCTCTTTCGAATTAGCT
GGGAGATACCGAGTA---TTGAGTATTGACTCGAGAAGTGCAGGTCGTTTCCAAGCCTAAACAAGCCAAAGAAAATCAGA
TCGAGATGCTA-----CTAC----TCCAGCTCAGCGTAGCTTGCATTGGTGTGGCAGCATAGCTGCATAAGTAAGTAGCT
G----------CAGAGACTCAAACATCATCACAGGACAGAGAGGCGACAATAG-ATT--CACGCTCTGACCACACTTTGA
TCTGATCTATTCGGTACCTGACAGAGCCGTGGTAGCTCAAGCTCGCTGCCGGCATGGAGGTGGATGGCAAGAAGCCGTAC
GTCATCGCCGTGATCATACAGGTCATCGCCACCGGCATGCTCGTCACCTCCAAGGCGGCGTACAACCAGGGGTTCAACAC
CTACGTCTTCGTCTTCTACCGCCAGGCCGCCGCGTCTCTTCTCTTGCTGCCTCTCGCCATTGTCCTCGAAAGGTACTGCC
TCAGAGCTAGCTATCTAT--CTGGTACTATTTGAGATATACTTC-----TAGCAACGGAACCATGCATGCAAGTAAGGTC
GATGATGAGTTGCAAACTGATTCCCAGGAAAAACATGCGGTTAATGTCGTTCCGGTTGCTCATGAAGCTGTTCCTCTATG
CCTTATTCGGGTAAGACGGCAAGTAAGCAACGCATGAAGTAAATTGCAAAAAATCATCACAATTGGCTCAAAGTTATCAA
TGCTTCAGGAAAAAGCCATCGGAAAACATGCATTTTGGTGGGTGTTTGATGACTTTTGCGCAATTGTGGTGGTTTTTTGC
AATTTACTCATCGATTGCGGCACCTAATTAGCTGTT--TATGTATGTGCAACAAATAGGAGATGA------ATGACTGAT
AGATATTTT--------------CAGGACTACATTTAGCTTGAACCTGTACAACGTGAGCCTCAAGTTAACATCTGCTAC
CGTGGGGTCTGCGACCAGCAACTCCATGCCCGTGGTCACCTTCATCATAGCGCTACTGCTGAGGTAAGAACTAG------
---TTGATCCGGCCAACTACTATTATATGATTATACTACTCTCTGTTTCATAATAATTGAACTAGAACCAGGACAAG---
----------------------------AATTATGGAATAGAGGGAGTACTAAAGTTAATCAGTAGTAGTAGTAGTAGTA
GTAGTAGTAGTACATACCT-AGTGACTTGTACACTTGGCCGC----AGGATGGAAGTGGTGAAGCTGAGGAGCCCCTCGG
GCATGGCGAAGGTGGCCGGAGTCGTGCTCTGCCTCGCCGGGGTGCTCGCCATCGCCTTGTACGTGGGTCCGTCCCTGGAC
CCGGTGAACCACCACCGCGCCTTTGCTGCCGCAAACGGGGAGGCTGATGCGAAGAGGGGGACGTGGATCATGGGCACGTT
GCTCATGGTGCTCGTCAACGTGACGTGGTCCCTGTGGATCGTCCTGCAGGCCGCGCTGCTCAAGGAGTTCCCCCACAAGC
TGCTCGTCACGGCCACGCAGTGCGCCTTCAGCGCGGGCCAGTGCTTCGTCGTCGCGGCGGTCGCCGAGAGGGACTTCTCC
CGGTGGCAGCTAGGGTTCGACGTCACACTGGTCGCCGTCCTCTACACCGTAGGGCT---TCCCAATTATCTGTCTTGATA
ATG-CTGCCA-------A--------------TGGATGTATGCATGGAGTGGTGGACTTATGTATGCATGGTTCAAAAAT
TCAGGGGTTTGTGGTGACGGGAGTGTCGTACTACCTGCAAGCATGGTGCGCGGACATGAGAGGGCCGGTCTTCCTCGCCG
TGTGGAACCCGCTCTGCTTCGTCTTCACCATTTTCTGCTCCTCCTTCTTCCTCGGAGAGATTGTTCACCTCGGCAGGTAC
GTGACGATTTGACATCGAAGATCT-----TTCAACTGCACAACTGGTCTATCAGTCTATCCTTGCAAAACTCCACTTCAT
TTATTCTTCTTTTTCATTAATTTTGGCAGTATCTTGGGTGGAATTCTTCTCGTTGGAGGTCTGTACAGCGTGCTGTGGGG
TAAAAGCAAAGAGATTCGGACTGCGCCATGTGATGAGCCGATTATGAT---CCATGGCGTGGGGGACGATAAATCTGCGG
ATGAGGAGGAGAAGAATGTTATTAGGAGCAGAGAAGTTAATGGGGAGATGGAGCACGATAAAGAAGCAACCATATCGCCT
GCTGAACAAGTCTAAATTCATCGATTGAAGGAGGCTCCATCT-TC----TCATGGGATGCATCCATTATTCGAGTAACCG
TGGACTCTGTCCAATTTAAACCACGGAGCAGGGTAACAGAAAAATAGGCTGTATTAAAGTTGAGGCATTTATTTTAAGGT
GAAGGGAGTAGTTGCTTAACCTTTTACAAGTCCCCGTCACCTAAATTAACTTGCATACTACTAAGCCTTACACGGTTACA
CTGCAAA-TTTGAAGGTGTGCTACTTTTGGTCCATATGTTGTATATGTGCAGTAAGCCAGTAACACAGATGTGGATGGTT
GGATGTTTGCCCCAAAAGTCTTTATAAATATAAGTTTGCATGTTCTATGCAACGGATCAATAAACTGTGATAAAAGAGTT
TGCATGTTCTGTGCATTACAGGCTTACCGCATTATGGACCAGTGCGCGTGTACACCGTAGCAAAAAATGGGCAAA-----
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---------------------------GATTTTTTTTCCACTTGAGCTTAGGACTTTGTCTAACAAAACTTGAGTTTAGG
ACTATTTGCACGAACCCTTGGAGAATGGTTCACCCAACTAGTATTTTTTGTGTGGCTTCTTGGCCGGCCAAACGTACTTC
TGGTGGACCAAATCTACATACTATGACCGATGGACCCAACATCCCTC-TGCCTGGTAATTTTTTTTATTGCTCAG---TT
TCTGGTTGCGGGCCTGGGAAGACCAGTCCCTGGGCCTTGTCCTAAGCCAACACTCCTGGGCATGGGCCTCCATTTTGATA
GGCTTCAAAGCCTTGCTTGGC-CGTCACTGCCAAGCATGGTCAACACGAAAAGAAA-TCATATGACCGCTCATTGCGACT
AATTGTTGACTTTTTTTGTGAGGCAGACTAATTATTGACTAATCACACACGGAAGTGCAT-------GGATGGACCAGGA
CAA-TCGAGCAGTCAAACAAGGAGTGGGAGATTTTCTTCCTTTCTCAAGACACTTTTGTTTTGTTTTTCTACTTTCTTCT
ATCTGTTTCCTTCCGGTTGATCTGTTTTCTCTTTTTTATTTCTTATTTGTTTTTCTAGTTATTTTTTTTCCTTTTTTATA
---TTTATATTTCATAAACATTTTTTCAATTATT-----TTTTAAAATCATATTTGAACATTTCTTAAAATAC
>chr2D_1
TACGTCACCACACTGTCCAATGATAGACCAATTATCTCACTCGCTTGGAAGAAGCGGGTGGTGCTCCTAC----------
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-------------------TACTTAAAACAAAGGCTTAATGTTAATGATCAGTGGGCAGCAAGCACGAGACTACTTAATT
ATGCTTAGAAAGATTGCATGTATCGATCGACAGGTCGGGAGCAAAACATGTGGCGCGAGGCATTGTTAATTTGACTTTCC
TAGCTAGACTTGACTGGCTGCTTACAAGGCCGCCTATCTTTTTCTGCGAAATCT---TAAGTAGCAAGTATACTTAACAG
CGCGAACAAATCACGCACATCAGTGTGACCAAGTTCACACTTGAGTCAGCATGCACGCAGATAAACCATGGAGAATGCAT
GTTTGTGTTGTTACTGAGACAGACCCTGTTTTGAGTTTGCTCGGATTTGCTCTTCAGGGTGAAAACTAAAGATCAAATCT
CTGTGCATGGATCTAACGCTGTAACGCGTCGTTGCTGAAGCACTTTACTCACAGTCCGAGTGCTGTCATTGGTGGAATTT
GATGTTGA---TGGTTGCTACTGTATGCTTTAGTTTGG---TTCGACATGACTTTTGAGGGTCACGTTTTTTCCTTTTTG
TCATTTGTGTGTGCTTTTGTGTTGGTTGTGTGTATCCTCGTCATGTAGGAAACGGGTGCACATCCATAGTACTTGTACTC
TTTTGATATGACATTATGAGTTAATAAAAACACCCTTTATCGGAAAGAAAAACAGTGTTAAGCCAATCAAGTAAATAAGC
CAAAGAAAATCAGATCGACTCAAGACGGTTAATGGCTAGGATTATATTCGTGTTTACCAGATCTCTCTTTCGAATTAGCT
GGGAGGTACCGAGTA---TTGAGTATTGACTTGAGAAGTGCAGGTCGTTTCCTAGCCTAAACAAGCCAAAGAAAATCAGA
TCGAGATGCTATGCTACTAC----TCCAGCTCAGTGTAGCTTGCATTGGTGTGGCAGCATA------------AGTAGCT
G----------CAGAGACTCA-------TCGCAGGATAGAGAGGCGACAATCG-ATTCACACGCTCTGACCACACTTTGA
TCTGATCTGTTCGGTACCTGACGGAGCCGTGGTAGCTCAAGCTCGCTGCCGGCATGGAGGTGGATGGCAAGAAGCCGTAC
GTCATCGCCGTGATCATACAGGTCATCGCCACCGGCATGCTCGTCACCTCCAAGGCGGCGTACAACCAGGGGTTCAACAC
CTACGTCTTCGTCTTCTACCGCCAGGCCGCCGCGTCTCTTCTCTTGCTGCCTCTCGCCATTGTCCTCGAAAGGTACTGCC
TCAGAGCTAACTATCTAT--CTGGTACTACTTGAGCTATACTTC-----TAGCAAGGGAACCATGCATGCAAGTAAGGTC
GATGATGAGTTGCAAACTGATTCCCAGGAAAAACATACGGTTAATCTCGTTCCGGTTGCTCATGAAGCTGTTCCTCTATG
CCTTATTCGGGT--------AAGTAAGCAACGCATGGAGTAAATTGCAAAAAATCATCACAATTGGCTCGAAGTTATCAA
TGCTTCAGGAAAAAGCCATCAGAAAACATGCATTTTGGTGGGTGTTTGATGACTTTTGCGCAATTATGGTGGTTTTTTGC
AATTTACTCATCGATTGCGGCACCTAATTAGCTGTT--TGTGTATACGCAACAAATAGGGGATGA------ATGATTGAT
CGATATTTT--------------CAGGACTACATTTAGCTTGAACCTGTACAACGTGAGCCTCAAGTTAACATCTGCTAC
CGTGGGGTCTGCAACCAGCAACTCCATGCCCGTGGTCACCTTCATCATAGCGTTACTGCTGAGGTACGAACTAG------
---TTGATCCAGCCAACTACTATTATATGATTATACTACTCTCTGTTTCATAATAATTAAACTA-AACCACGACAAG---
----------------------------AATTATGGAATAGAGGGAGTACTAAAGTTAGTC---------------AGTA
GTAGTAGTAGTACGTACCT-AGTGACTTGTACACTTGGCCGC----AGGATGGAAGTGGTGAAGCTGAGGAGCCCCTCGG
GCATAGCCAAGGTGGCCGGCGTCGGGCTCTGCCTCGCCGGGGTGCTCGCCATCGCCTTCTACGTCGGTCCGTCCCTGGAC
CCGGTGAACCACCACCGCGCCTTTGCTGTCGCAAACGGGGAGGCTGATGCGAAGAGGGGGACGTGGATCATGGGCACGTT
GCTCATGGTGCTCGTCAACGTGACGTGGTCCCTGTGGATCGTCCTGCAGGCCGCGCTGCTCAAGGAGTTCCCCCACAAGC
TGCTCGTCACGGCGACGCAGTGCGCCTTCAGCGCGGGCCAGTGTTTCGTCGTCGCGGCGGTCGCCGAGAGGGACTTCTCC
CGGTGGCAGCTGGGGTTCGACGTCACATTGGTCGCCGTCCTCTACACCGTAAGGCT---TCTCAATTCTCTGTCTTGACA
ATTCCTGCCA-------A--------------TGGATGGATGCATGGAGTGGTGGACTGATGTATGCATGGGTTG---AA
TTAGGGGTTTGTGGTGACGGGAGTGTCGTACTACCTGCAAGCATGGTGCGCGGACATGAGAGGGCCGGTCTTCCTCGCCG
TGTGGAACCCGCTCTGCTTCGTCTTCACCATTTTCTGCTCCTCCTTCTTCCTCGGAGAGATCGTTCACCTCGGCAGGTAC
GTGACGATCGA-----------------CATCGACTGCACAACTGGTCTATCAGTCTATCCTTGCAAAACTCCACTTCAT
TTATTCTTCTTTTTCATTAATTTTGGCAGTATCTTGGGTGGAATTCTTCTCGTTGGAGGTCTGTACAGCGTGCTGTGGGG
TAAAAGCAAGGAGAACCGGACTGGGCCATGTGGTGAGCCGATTATGATGATCCATGGCGTGGGTGACGGGAAATCTGCAG
ATGAGGAGGAGAAGAATGCG---AGGAGCAAACAAGTTAACGGGGAGATGGAGCACGATAAAGAAGCAACGGTATCGCCT
GCTGAACAAGTCTGATTTGATCGATTAAAGGAGGCCCCATCT-TC----TCATGGGATGCATCCATTATTCGAGTAATTG
TGAATTCAGTCCAATTTGAAC-----------------------------------------------------------
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>chr2B_1
TACGTCACCACACTGTCCAATGATAGACCAATTATCTCA-TCGCTTGGAAGAAGCGGGTGGTGCTCCTACGAGCATGGCT
AATAGAAACGCCTGCTGCCGGCTGTATAGCTGTTCCACGTCACATAAAGTCTTTGCATAAGTACGCTTGTATAATAAGCT
GGCTATATGTGGACTATTAGACTGGTTATAGTATTCAATGCATGCAGGTTGGGAGAAAGAGAAACGAACAGTAATTGGCA
GCGAGGAAAAAAGGAGCTGCATGCAGCCTCCTTTTTCTCGTACACTGTGCTGCAGCCCGGCGATAGCTGAAGAGCCCGCT
GTACTCTCTCTCTTCCCTTCTCACTCATCCATGTAGGATTTTGTTGACGTGGTGAATGTTATAGCCGGCTGACTAGGATC
TACTATACTTGCTCTACTATACTTGAAACAAAGGCTTAATGCTAATGATTAGTGGGCAGCAAGCACGAGACTACTTAATT
ATGCTTAGAAAGATTGCATGTATCGATCGACAGGTCGGGAGCACAACATGTGGCACGAGGCATTGTTAATTTGACTTTCC
TAGCTAGACTTGACTGGCTGCTTAGAAGGTCGCCTTTCCTTT-CTGTGAAATCTTAAGTACTC-CAAATATACTTAACAA
CGCGAAC-AATCACGCACATCAGTGTGACCAAGTTCACACTTGAGTCGGCATGCACGCAGATAAACCATGGAGCATGCAT
GTTTGTGTTGTTACTGAGACAGACCATGTTATGAGTTTGCTCGGATTTACTCTTCAGGGTGAAAACTAAAAATCTAATCT
CCGTGCATGGATCTAACGCTGTAACGCGTCGTTGCTGAAGCACTTTACTCATAGTCCGAGTGCTGTCATTGGTGGTATTT
GATGTTGA---TGGTTGCTACTGTATGCTTTAGTTTGG---TTCGACGAGACTTTTGAGGGTCACGTTTTC-CCTTTTTG
TCATTTGTGTGTGCTTTTGTGTTGGTTGTGTGTATCCTCGTCATGTAGAAACCGGGTGCATATCCATAATACTTGTATTC
TCTTGATATGACATTATGGGTTAATAAACATACCCTTTATTAGAAAGAAAAACC----TG-----------------AGC
CAAAGAAAATCAGTTCGACTCAAGACGGTTAATGGCTAGGATTATATTCATGTTTACTAGATCTCTCCTTCGAATTAGCT
GGGAGGTACCGAGTACTATTGAGTATTGACTCGAGAAGTGCAGGTTGTTTCCTAGCCTAAACAAGCCAAAGAAAATCAGA
TTGCGATGCTA-----CTAC----TCCAGCTCAGTGTAGCTTGCATTGGTGTGGCATCATA------------AGTAGCT
G----------CAGAGACTCAGACACCATCACAGGACAGAGAGGCGACAATCG-ATT--CACGCTCTGACCACACTTTGA
TCTGATCTATTCGGTACCTGGCAGAGCCGTGGTAGCTCAAGCTCGCTGCCGGCATGGAGGTGAATGGCAAGAAGCCGTAC
GTCATCGCGGTGATCATACAGGTCATCGCCACCGGCATGCTCGTCACCTCCAAGGCGGCGTACAACCAGGGGTTCAACAC
CTACGTCTTCGTCTTCTACCGCCAGGCGGCCGCGTCTCTTCTCTTGCTGCCTCTTGCCATTGTCCTCGAAAGGTACTGCC
TCAGAGCTAACTATCTAT--CTCGTACTACTTGAGCTATACTTC-----TAGCAAGGGAACCATGCATGCAAGTAAGGTC
GATGATGAGTTGCAAACTGATTCCCAGGAAAAACATGCGGTTAATGTCGTTCCAGTTGCTAATGAAGCTGTTCCTCTATG
CCTTACTCGGGT--------AAGTAAGCAACGCATGC----TGCTTGTCCAT----------------------------
--------------------------------------------------------------------------------
------CTCATCAATCGCTGCACCTAATTACTACTAGCAGTGTATGTGCAACTAATTGGAGATGA------ATGACTGAT
CGATATTTT--------------CAGGACTACATTTAGCTTGAATCTGTACAATGTGAGCCTCAAGTTAACATCTGCAAC
CGTGGGGTCTGCAACCAGCAACTCCATGCCCGTGGTCACCTTCTTCATAGCGCTACTGCTGAGGTACGTACC--------
-AATTGATCCAGCCAACTACTACTACATGATTAAGCTACTTGCTCCCTCCGTATCAAAATATAAGATGTTTTTTGATACG
AAGAGAGTATCAAAAAATATCCTATATTAATTTTGATACAAAGGGAGAAGTTGT--------------------------
-------TAGTACGTACATAAGTGACATGTACACTTGGCCAC----AGGATGGAAGTGGTGAAGCTGAGGAGCCCCTCGG
GAATGGCCAAGGTGGCCGGCGTCGGGCTCTGCCTCGCCGGGGTGCTCGTCATCGCCTTCTACGTGGGTCCGTCCCTGGAC
CCGGTGAACCATCACCGCGCCTTTGCTGTCGCAAACGGAGAGGCTGGTGCGAAGAGGGGGACGTGGATCCTGGGCACGTT
GCTCATGGTGCTCGTCAACGTGACGTGGTCCCTGTGGATCGTCCTGCAGGCCGCGCTGCTCAAGGAGTTCCCCCACAAGC
TGCTCGTCACGGCGACGCAGTGCGTCTTCAGCGCGGCGCAGTGCTTAGTCGTCGCGGCGGTCGCCGAGAGGGACTTCTCC
AGGTGGCAGCTGGGGTTCGACGTCACATTGGTCGCCGTCCTCTACACCGTAAGGCT---TCTCAATTCTCTGTCTTGATA
GTG-CTGCCAATGGATTA--------------TGGATGGATGCATGGAGTGGTGGATTGATTGATGTATGGTTCAAAAAT
TCAGGGGTTTGTGGTGACGGGAGTGTCGTACTACCTGCAAGCATGGTGCGCCGACATGAGAGGGCCGGTGTTCCTCGCCG
TGTGGAACCCGCTCTGCTTCGTCTTCACCATTTTCTGTTCCTCCTTCTTCCTCGGGGAGATTGTTCACCTCGGCAGGTAC
GTGGCGACCATCGACGACTAAGCT-----TTCAGCTGCACAACTGGTCTATCAGTCTATCCTTGCGAAACTCCACTTCAT
TTACTCTTCTTTTTCATTAATTTTGGCAGTATCTTGGGTGGAATTCTTCTCGTTGGAGGTCTGTACAGCGTGCTGTGGGG
TAAAAGCAAGGAGAATCGGACTGGGCCATGTGGCGAGCCGATTATGATGATCCATGGCGTGGGTGACGGGAAATCTGCAG
ATGAGGAGGAGAAGAATGCG---AGGAGCAAACAAGTTAACGGGGAGATGGAACACGATAAAGAAGCAACGATATTGCCT
GCTGAACAAGTCTGATTTGATCGACTAAAGGAAGCTCCTTCT-TC----TCATGGGATGCATCCATTATTCGAGTAACTG
TGGACTCTGTCCAATTTAAACCACATAGCAGGGGAACAGAAAAACAGGTTGTATTAAAATTGAGAAACTTATTTTGAGAT
GGAGGAAGTAGGTGCTTAACCTTTTGCAAATCT---TCACCTAAATTAACTTGCATACTACTAAGCCTTACACTGTTACA
CTGCAAACTTTGAAGGTGTGTAACTTTTAGTCCATATGTTGTATATATGCAGTAACGGAT--------ATGTGGATGGTT
GGGTGTTTGCCCCCAAAGTCTTAC-AAATATGAGTTTGCATGTTCTATGC----GATCAATAAATTGTGATACAAGGTTG
TA---------TGCATTACAGGCTTAGCGCATTATGGACCAGTGCGTGCCTGCACCGTAGCAAAAAATGGGCTAAAGGGA
GTATATACACACATACAACATGACAACAAGCGTGTGCATCATGCTGATGCAGAGGTCGGGGGCAATCCTCCTTTTCAAAA
AAAAAAACATGAAAACAAGCGTAATTGACCCGGAAACCCTACTTGTTCTTTTTGCACCGGTGTAGAATTTGCTAAGCACT
TATTCTATGGTTGTACCTCTCAAGAAAAAACTTATCCTTTGTTTGTAACATGGTTAGAGCTACTTGGGGAATTATTATAG
GTCATTATTGGTGCTACTTGTTGCCCCTCCTTTCTCTGGCAAAGCGTAGTGTGGCTATATTATTCCTTCTTACCTAGGGT
GTCACAAGTTTTATATGATATGCATTGCTGTTGTTTGCTGGGGCATTTGGACCAAAAGGAACATATTACCTTTGAAAAAC
ACGAGGTCAGATCTCCTGTTAGTGTTATCTTTACTATTTGCTCTTTCTTGATGTATATATCAGGTCTTCTTAAGGATGGA
GATAAGGAGAGTATTTGCAGTGGTGCGCAGATGGCAGCCGTTGGAGGTATTCATGGTGCGGGCATTGTTTTTGTGACGCT
CCGGTCTAGATCTCGATGTCGTCTACCTCAATTCCCTTTGATGTGCTGTCTTTGGTGGGCCTTCGGGTGGTAGGTGGTTA
GTAACCACGTGAAACCCATGATCGACGGATTATTTTTTCACTTGAGCTTAGGACCTTGTCTAAAAAAACTTGAGCTTAGG
ACTATTTGCATGAACCCTTGGAGAATGATTCACCCAACTAGTGTTTTTTGTGTGGCTTCTCGGCCGGCCCAACGTACTTC
TGGTGGACCAAATCTACATACTATCACTAATGGACCCAACATCCCTCCTGCTTGGTAACTTTTTTTTAGGGACTGGGTTT
TCTGGTTGCAGGCCTGGGAAGACCAGTTCCTGGGCCTTGTCCTAAGCCAACTCTCCTGCGCATGGGCCTCCATTTTGATA
TGCTTGAAAGCCTTGCTAGGTACGTCACTGCCAAGCACGGTCAACACGAAAAAAATTTCATATGACCGCTCATTGCGACT
AATTTTTGACTTTCTTTGTGAGACAGACTAATTGTTTTCCTTTTTAAGAAGGAGGTGGGGGTGGAGGGGATGGAGCAGGA
CAACTCGAGCGCTTAGGCGAACGTTAGAAGTTTTTCTTCCTTTCCATGACTCTTTCGTTTTGGGTTTTCTACTTTCTTCT
ATCTGTTTTCTTCTGATTTATCTGTTTTCTCTTTTTTCCTGTTTGTCA---TTTCTAGTTAAAGGTTTTCCTTTTCTTAC
TATTTTAAAGTTCACAAACATTTTTCAATATATATAAGATTCTAAAATCTTGTTTAAACATTTCTTAAAATAC
>chr3D_878
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------------------------------------------------TTCCTAGCCTAAACAACCCAAAGAAAATCAGG
TTTAGATGCTG-----CTACGTACTCCAGCTCAGTGTTGTAGCTC--GGCGTGGCAGCATA------------AGTAGCT
GAGCTTAGCTGCAGGGGTTCAGACACCAGCGCAGAACAGAGAGGCGACCATCGTATTCATACTCTCTGACCACACTCCGA
TCT---CTGTTGGGTTCCTGACAG---------------AGCTCACTGCCGGCATGGGGGCGGATGGGAAGAAGCCGTAC
GTGATCGCCGTGATCATACAGGTGATCTACACCGGCATGTTCGTCGTCTCCAAGGCGGCCTTCAACCAGGGGTTCAGCAC
CTACGTCTTCATCTTCTACCGCCAGGCCGCCGCGTCTCTCCTCTTGCTACCACTCGCCATTGCCCTCGAGAGGTA-----
---------ACTCTCTAG--CTGGTTCTGCTCGGGCTAC---CTAGCACTAGCAAGAGGATCGTATAAGAATCAGGCGCT
GATTTTG-----------------CAGGAAAAACGCGTGGGCAATGTCGTTCCGGTTGCTCCTGAAGCTGTTCATGTTTG
CCTTGATCGGGT--------AACTAA---TTAAGCGACGCATGCTTCTCGAT----------------------------
--------------------------------------------------------------------------------
------CTCATCAC---------------A-----AGCTGTTTATGTGCAACAAAGTGGAGATGGAGATGGATTACTGAT
CGATGTTAATATGGCTTTGTTTCCAGGACTACATTTAGCTTGAATCTGTACAACGTGAGCCTCAAGTTGACATCTGCAAC
CGTGGGATCTGCGACCAGCAACTCCATGCCGGTGGTCACCTTCTTCATAGCGCTTCTGCTGAGGTACTAATCCAGCGAGT
AAATCGACCCAGCTCCCTACCACTGTACGATCATACTACGTACGTTGTG-------------------------------
--------------------------------------------------------------------------------
---------------ACAT-ACTGACATGTACACTTGGCTGGCCTTAGGATGGAGGTGGTGAAGCTGAGGAGCCCCTCGG
GCATGGCCAAGGTGGCCGGCGTGGGGCTCTGCCTCGCCGGGGTGCTCGTCATCGCCTTCTACGTGGGGCCGTCCCTGAAC
CCGGTGAACCACCACCGCGCCCTGGCTGCCGCGACCGGAGACGCCGGCGCGACGAGGGGGACGTGGATCATGGGCACCTT
CCTCATGGTGCTCGCCAACGTGACGTGGTCCCTGTGGATCGTCCTGCAGGCCGCGCTGCTCAAGGAGTACCCCAACAAGC
TGCTCGTGACGGCGACGCAGTGCGTCTTCAGCGCCGGCCAGTGCTTCGTCGTCGCGGCGGTCGCTGAGAGGGACTTCTCC
AGGTGGCAGCTCCGCTTCGACGTCACCTTGCTCGCCGTCCTCTACACCGTAAGGCT---TCTTAATTCTCTGTCTTGTCA
ATG-GTG----------A--------------TGGATCGGTGCATGGAGTGGACTGGAGGCTGATGTGTGGATTG---AT
TCAGGGGTTCGTGGTGACGGGGGTGTCCTACTACCTGCAAGCATGGTGCGCGGACATGAAAGGGCCGGTCTTCCTCGCCG
TGTGGACCCCGCTCTGCTTCGTCCTCACCATTTTCTGCTCCTCCTTCTTCCTCGGAGAGATCGTTCACCTCGGCAGGTAC
GATCAGCAGCTAG-------CTTTCAAGCTTCAATTGCACTGCTGATCTACACACGGCTGCT---GAACTTCAAGTTCAT
TTGCTCTTCTTTTTCATTGATTTTTGCAGTATCTTGGGTGGAGTCCTTCTCGTTGGAGGTCTGTACAGCGTGCTGTGGGG
CAAAAGCAAGGAGAACCGGATTGCGCCATGTGGCGAGACGAAT---ATGATCCATGGCGTGGAGGGCGAGAATTCTGCAG
ATGATGAGGAGAAGAACGAG---AGGAGCAACCAAGTTAACGGGGAGAGGGAGCACGATAAGGAAGTAACGATGTCGCCG
GCTGAACAAGTCTGATTTGATCGAGTGAAGGAGGCTCCATCTATCTCATTCATGCGATGCATCCATTATTCGAGCAAC--
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>chr3B_887
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---------------------------------------------------------TAAACAAGCCAAAGAAAATCAGG
TTTAGATGCTG-----CTACGTAGTCCAGCTCAGTGTTGTAGCTC--AGCGTGGCAGCATA------------AGTAGCT
GAGCTTAGCTGCAGGGATTCAGACACCAGCGCAGAAGACAGAGGCGATAGTTG-GTTCACACTCTCTGACCACACTTTGA
TCT---CTGCTGGGTTCCTGACAG---------------AGCTCGCTGCCAACATGGGGGCGGATGGCAAGAAGCCGTAC
GTCATCGCGGTGATCATACAGGTCATCTACACCGGCATGTTCGTCGTCTCCAAGGCGGCCTTCAACCAGGGGTTCAGCAC
CTATGTCTTCATCTTCTACCGCCAGGCCGCCGCGTCTCTTCTCCTGCTGCCTCTCGCCATTGCCCTCGAGAGGTA-----
---------ACTGTCTAAAACTTGTTCTGCTTGAGCTTAGCTCTAGCGTTAGCAAGAGAATCATGTAAGAATCGGCCGCT
GATTTTG-----------------CAGGAAAAACGCGCGGTCAATGTCGTTCCGGTTGCTCCTGAAGCTGTTCCTCTTTG
CCTTAATCGGGT--------AAGTAATTATTAAGCAAAGCATGCTTCTCGAT----------------------------
--------------------------------------------------------------------------------
------CTCATGGACCGCTGCACGTAATTA-----AGCTGTTTATGTGCAACAAACCGGTGATGA------ATGACTGAT
CCATGTTGATATGGTTCTGTTTGCAGAACTACATTTAGCTTGAATCTGTACAACGTGAGCCTCAAGTTGACATCCGCAAC
CGTGGGCTCTGCAACCAGCAACTCCATGCCGGTGGTCACCTTCTTCATAGCGCTTCTGTTGAGGTACTAATCGACCCA--
--------------CCCTACCACTGTACGATCATACTACGTACGTTGTG-------------------------------
--------------------------------------------------------------------------------
---------------ACAT-ACTGACATGTACACTTGGCTGGCCTTAGGATGGAAGTGGTGAAGCTGAGGAGCCCGTCAG
GCATGGCCAAGGTGGCCGGCGTCGGGCTGTGCCTCGCCGGGGTGCTCGTCATCGCCTTCTACGTGGGGCCGTACCTGAAC
CCGGTGAACCACCACCGCGTCTTGGCTGCCGCGACCGGAGACGCCGGCGCGACGAGGGGGACGTGGATCATGGGCACGTT
CCTCATGGTGCTCGCCAACGTGACGTGGTCCCTGTGGATCGTCCTGCAGGCTGCGCTGCTCAAGGAGTACCCCAACAAGC
TGCTCGTCACGGCAACGCAGTGCGTCTTCAGCGCCGGCCAGTGCTTCGTCGTCGCCGCGGTCGCCGAGAGGGACTTCTCC
AGGTGGCAGCTCCGCTTCGACGTCACCTTGCTCGCCGTCCTCTACACCGTAAGGCTTCATCTTAATTCTCTGTCTTGTCA
ATG-GTG----------AACTCCCGGTT--GATGGACTGGTGCATGGGGTGGACTGGAGGCTGATGTGTGGATTG---AT
TCAGGGGTTTGTGGTGACGGGGGTGTCCTACTACCTGCAAGCATGGTGCGCGGACATGAAAGGGCCGGTCTTCCTCGCCG
TGTGGACCCCGCTCTGTTTCGTCCTCACCATTTTCTGCTCCTCCTTCTTCCTCGGAGAGATCGTTCACCTCGGCAGGTAC
GATCAACTTCATTCCTTCTTCTTTCAAGCTTCCGCTGCACTACTGATCTACACACGGCTGCT---GAACTTCAAGTTCAT
TTCTTCT--TTTTTCATTATTTTTTGCAGTATCTTGGGCGGAATCCTTCTCGTTGGAGGTCTGTACAGCGTGCTGTGGGG
TAAAAGCAAGGAGAACCGGATTGCGCCATGCGGCGAGACGAAT---ATGATCCGTGGCGTGGAGGACGAGAATTCTGCAG
ATGATGAGGAGAAGAACGAG---AAGAGCAACCAAGTTAACGGGGACAGGGAACACGATAAGGAAGCAACGATATCGCCG
GCTGAACAAGTCTGATTTGATCGAGTAAATGAGGCTCCATCTATCTC----ATGCGATGCATC-----------------
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>chr3A_1960
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----------------------TGACATGTACACTTGGCTGGCCTTAGGATGGAGGTGGTGAAGCTGAGGAGCCCCTCGG
GCATGGCCAAAGTGGCCGGCGTGGGGCTCTGCCTCGCCGGGGTGCTCGTCATCGCCTTCTACGTGGGTCCGTCACTGAAC
CCGGTGAACCACCACCGCGTCTGGGCTGCCGCGACCGGAGACGCCGGCGCGACGAGGGGGACGTGGATCATGGGCACCTT
CCTCATGGTGCTCGCCAACGTGACGTGGTCCGTGTGGATCGTGCTGCAGGCGGCGCTGCTCAAGGAGTACCCCAACAAGC
TGCTCGTCACGGCGACGCAGTGCGTCTTCAGCGCCGGTCAGTGCTTCGTCGTCGCCGCGGTCGCCGAGCGGGACTTCTCC
AGGTGGCAGCTCCGCTTCGACGTCACCTTGCTCGCCGTCCTCTACACCGTAAGGATTCTTCTTAATTCTCTGTCCTGTCA
ATG-GCG----------ATGAACTCCTGGCGATGGATTGGCGCATGGGGTGGACCGGAGGCTGATGTGTGGGTTG---AT
TCAGGGGTTCGTGGTGACGGGGGTGTCCTACTACCTGCAAGCATGGTGCGCGGACATGAAAGGGCCGGTCTTCCTCGCCG
TGTGGACCCCGCTCTGCTTCGTCCTCACCATTTTCTGCTCCTCCTTCTTCCTCGGAGAGATCGTCCACCTCGGCAGGTAC
GATCAACAGCTAG-------CTTTCAAGCTCCAACTGCACTGCTGATCTGCACACGGCTGCT---GAACTTCAAGTTCAT
---------TTCTTCTTTAATCTTTGCAGTATCTTGGGTGGAATTCTTCTCGTTGGAGGTCTGTACAGCGTGCTGTGGGG
CAAAAGCAAGGAGAACCGGATTGCGCCATGCGGCGAGACCAAT---ATGATCCATGGCGTGGAGGGCGAGAATTCTGGAG
AAGATGAGGAGAAGAACGAG---AGGAGCAGCCAAGTTAACGGGGACAGGGAGCACGATAAGGAAGCAACGATATCGCCA
GCTGAACAAGTCTGATTTGATCGAGTGAAGGAGGCTCCATCTATC----TCATGCGATGCATCCATTATTCGAGCAAC--
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-------------------------------------------------------------------------
>SNPs
--------------------------------------------------------------S-----------------
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------------------------------------------------------------S-------------------
----------------------------S---------------------------S-----------------------
--S-----------------------------------------------------------------------------
----------------------------S------------------------S--------------------------
S-------------------------------------------------------------------SS----------
--------SSS----------S----------------SSS-------S-------------------------------
-------S-------------------------------S----------------------------------------
------------S--------------S----------------------------------------------------
--------------------------------------------------------------------------------
-----S----------------------------------------------S---------------------------
----------------------------------S--------------------------SSSSSSSSSSSS-------
---------------------S---S-------------------------S----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------S-------------------S-----S-------------------S------------------------
--------------------------------------------------------------------------------
------------SSSSSSSS-------------------------------------------------S----------
--------------------S--------------------------------------------S--------------
---------------------------------------S----------------------------------------
S-------------------------------------------------------------------------------
------------------------------------------------------------------S-------------
----------S-----------------------------------------------S-----------S---------
----------------------------------------------------------S--SSSSSSSSSSSSSSS----
-------------S------------------------------------------------------------------
-------S-----------S----S---------------------------------S---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------S------------------------------------------------------------------
-----------S---------------S-----------------------S---------S-----S------------
--------------------------------------S-------------------S---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------SS-S-SSSSSS------------------------------------------------------------
--------------------------------------------------------------------------------
---------S----S-----------------S------------------------------------S--------S-
------------------SSSSS---------S-------S-----------------------------S---------
-------------S-S--S-----------------------------------------------------------S-
------------------------SS-------S----------S---S---------S-----SS-S-------S--S-
-S---S-----S-------------S---S--SSSS-------------------------------------S------
--------------------SS------S-----------------S--------SSS-SSSSSSSSS------------
--S----------S--------SSS------S------------------SSSS----------S-------S---SS-S
-SSSSSSSSSS---------------S-------------------S-SS-S--------------------S-------
--------------------------------------------------------------------------------
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-------------------------------S-----S----------------S--------S----------S-----
----------S----------------S--------------S-----------------S--------S----------
------------------------S--SS----------------------S------S-------SSS-SS-S------
---------S-----------------S-----------------------S------S---------------------
S----S-----------S--S----------------S--------------S--S------------------------
----S--------S--------S----------S--SS-SSS-SSS-S-S---S---SSS--------------S-----
----------SS-S-SS-S-SSSS-S-S--S-------------SSSSSSSSS--SSS---S-S----------------
--------S----S-S--S------------------SS-SS--S-SSSSS----------SSSS----------S-SSS
-------S-S----S----------SS-SS---S-------S-------S-S---S-----------------
>forward_1344
--------------------------------------------------------------------------------
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--------------------------------------------ATTGGTGTGGCAGCATAGCT----------------
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>reverse_3401
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----------------------------------------TGGGGAGATGGAGCACGATA--------------------
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-------------------------------------------------------------------------
>forward_3359
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-----------------------------------------------------------TGGGGGACGATAAATCTGCG-
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>reverse_5005
--------------------------------------------------------------------------------
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--------------------------------------------ACACACGGAAGTGCATGGAT----------------
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-------------------------------------------------------------------------
