>input_sequence_38280
--------------------------------------------------------------------------------
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----------------------------------------------------------ATGGCGACCCGTAAGCTACCCA
TCCCTTT-TCCAGCGCGAG-TTTTGTCCTTCACGAATTCGGTGGCACCGGAAGGGGCGGCTGTGGTTGTCGAACCCTCTC
GATTTTTTCGTTGCTCGGATTGATTGATTGATTGGTCGCCACGGCCGCGGTGCGGGTTTCGGGGCTGTCGTGAAGTGTCG
ATTCCGTGGCTAGATGTTGAGAACGGGTGTGATTTAGGCAGCGTCTTAGAGAAGGTGTGGTTTCGTCCCTGCAGAAAGAT
AGTTGACCGTCTGGACATGATTTATTCTTTGGTATTTAGGATT-AGAATTCGAATTAATAATTAGATTAGCTTTGAGTTT
GTGATGAGCAGCTGTTGCTGCTGCTGTATTTATCTAGGA----------TTAACCCCGTCACCATTTCGTATACAAGTGG
TGTTGCTGTGATCTGAGAGTATGAAATTGTGATGTTTAATCATGTGGTACACCTCCAAGTGGATGCCCTTGTGCCTGTGA
-AAGTGTTAGAAGTTCATATGTGATTTTCG-GTATAAGTAATTACCCTTCTAGTCTGA--GTTGCTGTACTGTTTGTGGC
AACTCTGCTCCTCGTATCCTT-TGGGTTTTGACCGTGTTCTTTGCTATGTGGTTTCTGCAGGTATCCAGTTTGAGAACAA
CTGTGAAGTTGGTGTTTTCTCCAAGCTCACAAATGCCTACTGTCTGGTTGCAATTGGAGGATCAGAGAATTTCTACAGGT
TAGCAATGGATGTTTCCTTTGGTTTAGCTTTTTGGACTTTTGGTGGAAGCAGAGGAATAACTAACTC-TAACTGATTGAT
CTTTTGAATACCTATGCAGTACATTTGAGTCTGAGCTTGCAGATGTCATTCCTGTGGTCAAGACCTCTATCGGTGGCACT
AGAATAATTGGTCGCCTCTGCGTTGGTTAGCCTTTGAACTTATAGTCTGTCATTTGAGCTATTCACTCACTTGTAGTGTA
CTTACCACCACCTTGATGACCCCAGGAAACAAGAATGGACTTCTCTTGCCACACACAACCACTGATCAAGGTACTTTATT
TCGGAACCTCAATCTACAATGT-------AATTGTTTACATAATTCTGTTATGTCTTGTGTGTTGTTG--------CGAA
CCGCACAGTTCTCTTATGGTTTAATATGCTTTTGAATACGAAGTTGCTATCTACCAGCATTCATTTTCAAGTTGATTTTA
GTACTTAAAAGACTGTTGATACCATTGGAGTTACATAGAAGTTGCTTAGAGATTCGTTATGTCTACAGATGTTGGTTTCT
TCAGTCATTTCTGATGTTTCAGTTCTTAGACATCTTGCTTCTAGAGAGGCATGATTTGTGTAGTTAAGTGATATTATGAT
TTTTGTGATGCTTATTATTTTTATGGGGTTTTGAAC-TTTTGCTAGAGCTTCAGCATCTGAGGAACTGCATACCTGATCA
AGTGGTTGTTCAGCGCATCGATGAGAGGCTGTCTGCCCTTGGCAATTGCATATCCTGCAATGACCATGTTGCGCTCACAC
ACCCTGACCTTGACAAGGTATGCCTATACATCCCTAGTGATGTTTATTTGCTGAACCTGTGCCTTTCCTAGCTTACCT-C
AACTAAAGTATCTCCTGTTTGGTTCCCCAGGCAACTGAGGAGCTTATTGCAGATGTGCTTGGGGTTGAGGTGTTCCGTCA
GACGATTGCAGGAAATATCCTTGTTGGCAGCTACTGTGCATTCTCTAACAGGGGTGGACTGGTATGGTGTTGCTGCATTT
GCATCCCTCTGATCTAT---------------------------------------------------------------
---------------------CTGTTTCTGCAAAAATTGGTTAAG-GTTGTTAATGTGCAATTCCTTTGCGGCACAGGTC
CATCCTCACACATCCATTGAAGATCTTGATGAGCTGTCCACACTCCTCCAAGTCCCTCTTGTCGCTGGAACCGTGAACCG
TGGTAGCGAGGTCATTGCTGCGGGCATGACGGTGAACGATTGGACCGCCTTCTGTGGCTCAGACACAACGGCTACCGAGC
TGTCCGTCATCGAGAGCGTCTTCAAGTTGAGAGAAGGCCAGCCCACAGCGATCGTCGATGACATGAGGAAGTCGCTGATT
GACAGCTATGTCTAA-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-----------------------------------------------------------------
>chr2B_1_TraesCS2B01G172800
ATTGATATTTACAAAATTACAGTAAATATTTAGCAACATATGAGTGATTAGAGGAAATTATAATATTCTACCACAACCTT
GGAAGAATAACTATAAGACTACACAAGATGATCTAAA--------AAAATTACCATCTTAACTCGTACTTTTTATATTGC
TATTCATG-AAAATTGTTGTTAAATTAATTCAAAATTTCGGAAGTTAATTCCTCTTTCATGGAAGTTTTTTTTAACATAC
TACAGACGCAAGCGCTCATACATACGTGCATACACTTACCCTATGAACGCACACACGCACACCCTACCCCTATGAGCACT
TTTGAGAGACTGAGCCAACATGTCTCCTCCCACTGAAAGCGCATCGCTGAAAATCCTGAAATAAATCCATGAATAATGCG
AGCACCAGGACTTGAACCCTGGTGGTTGAGGATACCACTACCCCTCTGACCATGGTTCGCTCTTTCATGAAAGTTAGAAA
TATCACTTTCTACCCGCAAAAAAAATGTCACTTCCAGTTTTTTATGAATTGAGGATTTCCAGAGTACATTACGTTTTTCT
TGAGGTA--AGAGTGTATTACGTTCTTCAAAACATTTCGCAGCGAGAGAAGGCCAACAGCGATGGGTGGGCCGAACACAC
GAATGAGAGCCTCGGCCCATAGCATCAGCACGGGCCGGCTGTGACGTCTCGACCTAATAGGACCAGCCCGTTCGGCCCAC
ACAGTTCCGCCGCCGTCTCTCCGAGCGGCCCGTGCTCATATACCACGCCGCCACGGCTCTCCCCTCGTTCCCCATTCTCT
CGGAAGCCGCGCTCCCAAACCCTAGCT-CCCACCGCAGCGGCCACCGCCTCTCGACCCCCGCCCCT---CTCCCGGTTCG
CCGCCCGCTTCCTTCTCCCGCACCAGCGATCCCTCTCCCCTGCCCGTCTGCTCGCTGAATCATCCGCGCGTTTGATCTGC
AGGTGCGCGCCTGTTGCTGCAGACGAGAAGCGGCTGAGGCGAAGA---GGAATCGACCATGGCGACCCGTAAGCTACCCA
TCCCTTT-TCCAGCGCGAG-TTTTGTCCTTCACGAATTCGGTGGCACCGGAAGGGGCGGCTGTGGTTGTCGAACCCTCTC
GATTTTTTCGTTGCTCGGATTGATTGATTGATTGGTCGCCACGGCCGCGGTGCGGGTTTCGGGGCTGTCGTGAAGTGTCG
ATTCCGTGGCTAGATGTTGAGAACGGGTGTGATTTAGGCAGCGTCTTAGAGAAGGTGTGGTTTCGTCCCTGCAGAAAGAT
AGTTGACCGTCTGGACATGATTTATTCTTTGGTATTTAGGATT-AGAATTCGAATTAATAATTAGATTAGCTTTGAGTTT
GTGATGAGCAGCTGTTGCTGCTGCTGTATTTATCTAGGA----------TTAACCCCGTCACCATTTCGTATACAAGTGG
TGTTGCTGTGATCTGAGAGTATGAAATTGTGATGTTTAATCATGTGGTACACCTCCAAGTGGATGCCCTTGTGCCTGTGA
-AAGTGTTAGAAGTTCATATGTGATTTTCG-GTATAAGTAATTACCCTTCTAGTCTGA--GTTGCTGTACTGTTTGTGGC
AACTCTGCTCCTCGTATCCTT-TGGGTTTTGACCGTGTTCTTTGCTATGTGGTTTCTGCAGGTATCCAGTTTGAGAACAA
CTGTGAAGTTGGTGTTTTCTCCAAGCTCACAAATGCCTACTGTCTGGTTGCAATTGGAGGATCAGAGAATTTCTACAGGT
TAGCAATGGATGTTTCCTTTGGTTTAGCTTTTTGGACTTTTGGTGGAAGCAGAGGAATAACTAACTC-TAACTGATTGAT
CTTTTGAATACCTATGCAGTACATTTGAGTCTGAGCTTGCAGATGTCATTCCTGTGGTCAAGACCTCTATCGGTGGCACT
AGAATAATTGGTCGCCTCTGCGTTGGTTAGCCTTTGAACTTATAGTCTGTCATTTGAGCTATTCACTCACTTGTAGTGTA
CTTACCACCACCTTGATGACCCCAGGAAACAAGAATGGACTTCTCTTGCCACACACAACCACTGATCAAGGTACTTTATT
TCGGAACCTCAATCTACAATGT-------AATTGTTTACATAATTCTGTTATGTCTTGTGTGTTGTTG--------CGAA
CCGCACAGTTCTCTTATGGTTTAATATGCTTTTGAATACGAAGTTGCTATCTACCAGCATTCATTTTCAAGTTGATTTTA
GTACTTAAAAGACTGTTGATACCATTGGAGTTACATAGAAGTTGCTTAGAGATTCGTTATGTCTACAGATGTTGGTTTCT
TCAGTCATTTCTGATGTTTCAGTTCTTAGACATCTTGCTTCTAGAGAGGCATGATTTGTGTAGTTAAGTGATATTATGAT
TTTTGTGATGCTTATTATTTTTATGGGGTTTTGAAC-TTTTGCTAGAGCTTCAGCATCTGAGGAACTGCATACCTGATCA
AGTGGTTGTTCAGCGCATCGATGAGAGGCTGTCTGCCCTTGGCAATTGCATATCCTGCAATGACCATGTTGCGCTCACAC
ACCCTGACCTTGACAAGGTATGCCTATACATCCCTAGTGATGTTTATTTGCTGAACCTGTGCCTTTCCTAGCTTACCT-C
AACTAAAGTATCTCCTGTTTGGTTCCCCAGGCAACTGAGGAGCTTATTGCAGATGTGCTTGGGGTTGAGGTGTTCCGTCA
GACGATTGCAGGAAATATCCTTGTTGGCAGCTACTGTGCATTCTCTAACAGGGGTGGACTGGTATGGTGTTGCTGCATTT
GCATCCCTCTGATCTAT---------------------------------------------------------------
---------------------CTGTTTCTGCAAAAATTGGTTAAG-GTTGTTAATGTGCAATTCCTTTGCGGCACAGGTC
CATCCTCACACATCCATTGAAGATCTTGATGAGCTGTCCACACTCCTCCAAGTCCCTCTTGTCGCTGGAACCGTGAACCG
TGGTAGCGAGGTCATTGCTGCGGGCATGACGGTGAACGATTGGACCGCCTTCTGTGGCTCAGACACAACGGCTACCGAGC
TGTCCGTCATCGAGAGCGTCTTCAAGTTGAGAGAAGGCCAGCCCACAGCGATCGTCGATGACATGAGGAAGTCGCTGATT
GACAGCTATGTCTAAATGATCAAAAGGGCATGCAGTGCGGTG----TGGTTCTTGAGCTGTACTCTTGGTTGACAGTAGC
AAAAAAG-CGTGCCTGTCTAAGCTGTTACTTCTGTCTG-TCTTCTGAATTTGGGATTGCAAACT--TATGCTTTGTACTG
G--TAAAGCTTACGGTATCGGGAGATGCGCAACCTTATACTTCTAGTCCAGTATATGTTGGTTTTATATTCTACTCCCTC
CGTCCAGAAATACTTGTCACACGATAAGTATTTCCTGACGGAGGGAGTACTAGCATTGACGAACTTCGGTTACATCTACG
TTGACGATTCATGCATTGTTTTTCCACTTGGAGAAATTTCTTGCTCTGTTATATAAAAAAATACGGAAATGTTAACGCCC
ACACGTGTGGGCGTTAGCCAACTCGCCCACACGCCTTCATCACCGTCCAACGCCTTTTGCACGAATGTTGGCGTAAAAAG
GCTGATTTTGTGTGCTATGTAGGACAAGGCGTGTGTGTGGTGTGAGACATAGTTCGCCCACACATCCAATTTGCCACATG
GAGGGACCGGTGTGTGGACGTTTAGCAGTTCACCCACACACCAGTTTTCAGTCACGCACAAGGGATGATGTGTCGGCGTT
TGCCATCTCGTCCACACGTCCGCCTCCTCTCTCACACTCAAGCTGCCAGTTGCCATGCGTTTTGCAGCGTACATGGCAAT
TGCCCTAGTGTGATTGCAAGCAGATGGCAACTCTTTCTTTCTTTTATCCAAACATGTCAGTTGCCATATTTTTTGCATGG
TACTCCCTCCGTCCGGGTTTATTAGGCCTAAAGACAACTTTTCTTAGACCAAGACACATAGTAATTTGCTCACATTAATT
CTTTCATTCCACTCCCAATGCACTCTCTCACATGCATGCAGCCAATGAAAAAGCACACATGAAGTGTATTAACTTTTCAG
CCATGGCACCAACAACAATAGCTTTCAATACAACCAATGAAATGGTTGCATGCATGCACCTTTCC
>chr2A_3
--TGATATTTACAAAACTACAGTAAATATGTAGCAACATATGAGTGACTAGATGAAATTATAATATTTTACCACAACCTT
GGAAGAATAACTATAACACGACACTAAAAATTTCAAAAATCTCGGAAAATTACCATCTTAACTCGTGCTTTTTATATTGC
AATACATGAAAATTATTTGTTAAATTAATGTGAATTTTTTTAAGTTAAAAC-----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------CTCTTTAATGGAAGTTAGAAA
TGTCATTTCCAGTTTATC-------------------------ATGAATCGAAGATTTCCAGAGTATATTACGTTTTTTT
TTTTGAGACAGAGTATATTAGGTTTTTCAAAACATTTCGCAGTGAGAGAAGCCCAACGGCGATTGGTGGGCCGTACACAC
GAATGAGAGCCTCGGGCCATAGCATCAGCACGGGCCGACTGTGACGTCTCGACCTAACAGGACCAGCCCGTCCAGCCCAC
ACAATGCCGCCGCCGTCCCTCCGAGCGGCCCGTGCTCATATACCACGCTGCCACGGCTCTCCCCTCGTTCCCCATTCTCT
CGGAAGTCGCGCTCCCAAACCCTAGCT-CCCACCGCAGCGGCCCCCGCC------------------CCCTCCCGGTTCG
CCGCTCGCTTCCTTCTCCCGCACCAGCGACCCCCCTCCCCTGCCCGGTCGCTCGCTGAATCATCCGCGCGTTTGATCTGC
AGGTGCGCGCTTGCTGCTGCAGACGAGAAGCGGCTGAGGCGAAGAAGAGGAATCGACCATGGCGACCCGTAAGCTCCCCG
TCCCTTTCTCCAGTGCGCG-TTTTGTCCCCCACGAATTCGGTGGCATCGGAAGGGGCGGCTGTGGCTGTCGAATCCTCTC
GTTTTTTTCACTGTTCGGATTGACTGACTGGTTGGTCGCCACGGTCGCGGTGCGCGTTTCGGGGATGTTTTGGAGTGTCG
ATTTCGTGGCTAGATGTTGAGAACAGTTGGTATTTAGGCAGCATATTAGAGATGTTGTCGGTTGGTCCTTTCGAGAGGAT
TCTCAGCTATCTGGATATGATTTATTCTTCGGTATCTAGGATTTAGAGTTCGAATTAATGTTTAGATTAGCTTTGAGTTT
GTGATAAGCAGCTGTTCGTTGCGCACTTTGATGAGAGATTGCAGTTGAGTTAACCACATCCCCATTTCATATACAAGTGG
TGCTGTTGTGCTCTGAGAATATGAAATCGTGATGTTTAATCATGTGGTACACCTCCAAGTGGATGCTCTTGTGCCTGTGA
TAAGTGTTAGAAGTTCCTATGTGATTTTTCAGTACAAGTCATTACCCTTCTAGTCTGA--GTTGCTGTACTGTTTGTGGC
AACTCTGCTTCTTGTAGCCTT-TGGGTTTTGACCTTGTTCTTTGCTATGTGGTTTCTGTAGGTATCCAGTTTGAGAACAA
CTGTGAAGTTGGTGTTTTCTCCAAGCTCACAAATGCCTACTGTCTGGTTGCAATTGGAGGATCAGAGAATTTCTACAGGT
TAGCAATGGATGTTTTCTTTGGTTTAGCTCTTTGGACTTTTGGTGGAAGCAGAGGAATAACCAGCTC-TAACTGATTGAT
CTTTTGAATACCTATGCAGTACATTTGAGTCTGAGCTTGCAGATGTCATTCCTGTGGTCAAGACCTCTATCGGTGGCACT
AGAATAATTGGTCGCCTCTGCGTTGGTTAGCATTTGAACTTATACTCAGTCATTTGATCTATTCACTCACTTGTAGTGTA
CTTACCACCACCTTGATGACCCCAGGAAACAAGAATGGACTTCTCTTGCCACACACAACCACTGATCAAGGTACTCTGTT
ACAGTACCTCAATCTACGATGC-------AATTGTTTGCATAATTCTGTTATGTCTTGTGTGTTGTTGACTTGTTACGTA
CTGCACAGTGCTCTTATGGTTTAATATGC-TTTGAATACGAAGTTGCTTTCTACCAGCATGCACTTTCAAGTTGATTTTA
GTACTTCAG-GACTGTTGATACTATTGGAATTACATAGAAGTTGCTTAGAGATTTGGTATGTATATAGAGGCTGGTTTCT
TCAGGCACTTGTAATGTATCAGTTCTTAGAAATCTTGCAACTAGAGAGGCATGATTTCTGTAGGCAAGTGATATTATGAT
TTTCGTGATGCTTATTATGTTTATGGGATTTCAAAA--TTTTCTAGAGCTTCAGCATCTGAGGAACTGCATACCTGATCA
AGTGGTTGTTCAGCGCATCGATGAAAGGCTGTCTGCCCTTGGCAATTGCATATCCTGCAATGACCATGTTGCGCTCACAC
ACCCTGACCTTGACAAGGTATGCCTATACATCCCTAGTGATGTTTGTTTGTTGACCCTGTGCCTTTCCTAGCTTACCTTC
AACTAAACTATCTCCTGTTTGGTTCCCCAGGCAACTGAGGAGCTTATTGCAGATGTGCTTGGGGTTGAGGTGTTCCGTCA
GACGATTGCAGGAAATATCCTTGTTGGCAGCTACTGTGCATTCTCTAACAGGGGTGGACTGGTATGTTGTTGCTGCATTT
GCATACCTCTGATCTAC---------------------------------------------------------------
---------------------ATGTTTCTGCAAAAATTGGTTAA--GTTGTTAATGTGCAATTCCTTTGTGGCACAGGTC
CATCCTCACACATCCATTGAAGATCTTGATGAGCTGTCCACACTCCTCCAAGTCCCTCTTGTCGCTGGAACCGTGAACCG
TGGTAGCGAGGTCATTGCTGCGGGCATGACGGTGAACGACTGGACCGCCTTCTGTGGCTCAGACACCACGGCTACCGAGC
TGTCCGTCATCGAGAGCGTCTTCAAGTTGAGAGAAGGCCAGCCCACAGCGATCGTCGATGACATGAGGAAGTCGCTGATT
GACAGCTATGTCTAAATGATCAAA-GGGCATGCGGTGCGGTGTGGTTGGTTCTTGAGCTGTACTCTTGGTTGACAGTAGC
AAAAAAAACGTGCCTGTCTAAGCTGTTACTTCTGTCTG-TCTTCTGAATCTGGAACTACACACTTATATGCTTTGTACTC
G--TAAAGCTTACGGTATCGGAAGA-------------------------------------------------------
--------------------------------------------------------------------------------
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>chr2D_566
--------------------------------------------------------------------------------
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----------------ATTACGTTTTTCAAAACATTTCGCAGCGAGAGAAGCCCAACAGCGATGGGTTGGCCGAACACAC
ACGGATGGGAGCCTCCCCGTAGCATCATCATGGGCCGTCTGTGACGGCTCAACCTAATAGGACCAGCCCGTTCGGCCCGC
ACAGTTCCGCCGCGGTCTCTCCGAGCGGCCCGTGCTCATATACCACGATGCCACGGCTCTCCCCTCGTTCCCCATTCTCT
CGGAAGTCGCGCTCCCAAACCCTAGCTCCCCACCGCAGCGGCCACCGCCTCTCGACCCCCGCCCCCTCCCTCCCGGTTCG
CCGCCCGCTTCCTTCTCCCGCATCAGCGACCCCTCTCCCCTGCCCGGCCGCTCGCTGAATCATCCGCGCGTTTGATCTGC
AGGTGCGCGCTTGTTGCTGCAGACGAGAAGCGGCTGAGGCGAAGAAGAGGAATCGACCATGGCGACCCGTAAGCTCCCCG
TCCCTTT-TCCAGTGCGAGTTTTTGTCCTTCACGAATTCGGTGGCACCGGAAATGGCGGCTGTGGTCGTCGAACCCTCTC
GATTTTTTCACTGTTCGGATTGATTGATTGGTTGGTCGCCACGGTTGCGGTGCGCGTTTCGGGGCTGTCGTGAAGTGTCG
ATTTCGTGGCTAGATGTTGAGAACTGGTGTGATTTAGGCAGCATCTTAGAGAAGGTGTGGTCTCGTCCCTGCAAAAAGAT
AGTTGACCGTCTGGACATGATTTATTCTTTGGTATTTATGATTAGAAATTCGAACTAATATTTAGATTAGCTTAGAGTTT
GTGGCAAGCAGCTGTTGCTGCTGCGGTCGTTATCTAGGA----------TTAACAGCATCACCATTTCGTATACAAGTGG
TGTTGCTGTGATCTGAGGGTATGAAATTGTGATGTTTAATCATCTGGTATAGCTCTAAGTGGATGTCCTTGTGCCTGTGA
CAAGTGTTAGAAGTTCATATGTGATTGTTCAGTATAAGTCATTACCGTTATAGGCTTGGTGTTGCTGTGCAGTTTGTGTC
AACTCCGCTTCTCGTAGTCTTCTGGGTTTTGACCCTGTTCTTTGCTATGTGGTTTCTGTAGGTATCCAGTTTGAGAACAA
CTGTGAAGTTGGTGTTTTCTCCAAGCTCACAAATGCCTACTGTCTGGTTGCAATTGGAGGATCAGAGAATTTCTACAGGT
TAGCAATGGATGTTTCCTTTGGTTTAGCTTTTTGCACTTTTGGTGGAAGCAGAGGAATAACCAACTCTTAACTGACTGTT
CTTTTGAATACTTATGCAGTACATTTGAGTCTGAGCTTGCAGATGTCATTCCTGTGGTCAAGACCTCTATCGGTGGCACT
AGAATAATTGGTCGCCTCTGCGTTGGTTAGCCTTTGAACTTGTATTCATTCATTTGAGCTATCCACTCACTTGTAGTGTA
CTTACCACCACCTTGATGACCCCAGGAAACAAGAATGGACTTCTCCTGCCACACACAACCACTGATCAAGGTACTTTATT
CCAGTACTTCAATGTTCAATCTACGGTGTAATTATTTGCACAATTCTGTTATGTCTTGTGTGTTGTTG--------TGTA
CTGCACAGTGCTCTTATGGTTTAATACGCTTTTGAATACGAAGTTGCTTTCTACCAGGACTCACTTTCAAGTTGATTTTA
GTACTTCCGAGACTGTTGATACTATAGGAATTACATAGAAGTTGCTTAGAGATTTGTTATGTCTATAGAGGCTGGTTTCT
TCAGGCAATTATAATGTCTCTGTTCTTAGAGATCTTGCATCTAGGGAGGCATGATTTCTGTACATAACTGATATTATGAT
TTTCGTTATGCTTACTATTTTTATGGGTCCTCGTATTTTTTTCTAGAGCTTCAGCATCTGAGGAACTGCATACCTGATCA
AGTGGTTGTTCAGCGCATCGATGAGAGGCTGTCCGCCCTTGGCAATTGCATATCCTGCAATGACCATGTTGCGCTCACAC
ACCCTGACCTTGACAAGGTATGCCTATACATCCCTAGTGATGTTTGTTTGCTGGCCCTGTGCCTTCCCTAGCTTATACTC
AACTAAAGTATCTCCTGTTCGCC-CCCCAGGCAACTGAGGAGCTTATTGCAGATGTGCTTGGGGTTGAGGTGTTCCGTCA
GACAATTGCAGGAAATATCCTTGTTGGCAGCTACTGTGCATTCTCTAACAGGGGTGGACTGGTATGGTGTTACTGCATTT
GCATCCTTCTGATCTATTACCTCTGTTCCGAAATATAAGTCGCTGGGGGAGTTCAGTTTACACTCCCCCAACGACTTATA
TTTATGGAACGGAGGGAGTACCTGTTTCTGCAAAAATTGGTTAAAAGTTATTAATGTGCAATTCCTTTGTGATACAGGTC
CATCCTCACACATCCATTGAAGATCTTGATGAGCTGTCCACACTCCTCCAAGTCCCTCTTGTAGCTGGAACCGTGAACCG
TGGTAGCGAGGTCATTGCTGCGGGCATGACGGTGAACGACTGGACCGCCTTCTGTGGGTCAGACACAACCGCTACTGAGC
TGTCCGTCATCGAGAGCGTCTTCAAGTTGAGAGAAGGCCAGCCCACGGCGATCGTCGATGACATGAGGAAGTCGCTGATT
GACAGCTATGTCTAAATGATCAAA-GGGCATGCGGTGCGGTGTGGTT----CTTGAGCTGTACTCTTGGTTGACAGTAGC
AAAAAAC-CGTGCCTGTCTAAGCTGTTACTTCTGTCTGGTCTTCTGAATCTGGAACTACAAACTTATATGCTTTGTACTC
GTATAAAGCTTATGGTATCGGAAGA-------------------------------------------------------
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>SNPs
SS--------------S------------S-----------------S----S--------------S------------
----------------S--S----S-S-SSS-SS--------------------------------S-------------
S--S--------S-SS-------------SSS--S---SSS-------SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------S---S----------
-S---S--S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------S--S-------------S-----------S-
-SSS-SS-------S---------S--------------------------S----------------------------
-------------------------------------S------------------------------------------
------------------------------------------------S-------------------------------
------S----------------------------------------------------------S--------------
-----------------------------S----------------S-S-------------------------------
----------S----------------------------------------------------------------S---S
-------------S------------------------------------------------------------------
---------SS--S----------------S-------------S---------S-------------------------
---S--------------------S-----------------S------------------------------S------
------------------------------------------------------------S-------------------
-----S------------------S--S---------------------------S-S----------------------
--------------------------------------------------------------------------------
----------------------------SS---------S----------------------------------------
---------S------S-----------------S-----------------------S---------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------S------------------
--------------------------------------------------------------------------------
--------------------------------------------S--S--------------------------------
--------------------------------------------------------------------------------
S-S-S--------------------------------S----------------------------------------S-
-S-------S--------------------------------------S--------------S----------------
------S-S-------------S------S------------------------S----------S---S-S--------
----S--S--S-S----S------------S-------S------------------S-----S----------------
---S-----------------------S---S---S-----S--------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------S--------S-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------S------------------------S----------
--------------------------------------------------------------------------------
---------------------------------------S----------------------------------------
--------------------------------------------------------------------------------
------------------------S--------S----------------------------------------------
------S------------------------------------------S---S-S-S---------------------S
---------------------S---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_270
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------AGCGCTCATACATACGTGCA--------------------------------------------------
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>reverse_1225
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------------------------GGGTGTGATTTAGGCAGCGT------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------------
>forward_351
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------GAGCCAACATGTCTCCTCCC-------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_1617
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------TCCTTTGGGTTTTGACCGTGT-------------------------------------------
--------------------------------------------------------------------------------
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>forward_425
--------------------------------------------------------------------------------
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-----CAGGACTTGAACCCTGGTGG-------------------------------------------------------
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>reverse_2159
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------------------------------------------------------------------------------AA
CCGCACAGTTCTCTTATGGT------------------------------------------------------------
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>forward_453
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------ACCACTACCCCTCTGACCAT---------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------
>reverse_2442
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------GCTAGAGCTTCAGCATCTGAGG-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------
>forward_456
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------ACTACCCCTCTGACCATGGT------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------
>reverse_2606
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------ATTTGCTGAACCTGTGCCTT---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------
>forward_807
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------TTCCCCATTCTCT
CGGAAGC-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------
>reverse_2615
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------ACCTGTGCCTTTCCTAGCTT------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------
>forward_2162
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------TCTTGTGTGTTGTTGCGAA
CC------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------
>reverse_3869
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------CTCTCACACTCAAGCTGCCA--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------
