>input_sequence_38246
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-----------------------------------------------------------------ATGGAGTCGGACACA
TGCGACCTCAGCGAAGGCATGTCGACGGAGCGCGCGTACGAGGCGGAGCCGGTGCCGTCGCTGTCGGAGACCATCACGGC
GCGGTCGCTGGCGGTGAGCTTCGTCCTGGGCGTGACCCTCACCGTGGTGGCCATGAAGATCAGCCTCAACTCGGGGTTCC
TCCCGTCGCTCAGCATCCCGGCGTGCCTCCTGGGCTTCTACCTCTCGCGCGCGCTCATCCGGCTGCTGGAGTACCTGGAG
GTGTCCCACCTCCCCTTCACCCGGCAGGAGAACACCGTGATCCAGACCTGCGTCGCCGCCTGCACCACCATCGCCTTCAG
CGGCGGCTTCGGCACGTTCCTCCTGGCCATGGGCCGCAAGTCGGCCGGCGACGACAACGTCAAGTACGACGTCAACGTGG
AGGAGCCGAGCATCCCCCGCATGATCGCCTTCCTCTACCTCGTCAGCTTCGCCGGCATCTTCATCATCATGCCGTTCCGG
AAGGTGATGATCATCCGGCACCAGCTGACGTTCCCCAGCGGCACGGCCACGGCGCACCTCATCAACAGCTTCAACACGCC
GCAGGGCGCCACCCATGCCAAGCTGAAGGTGTCCATGCTGTTCAAGTCGCTCGCGGGCTCCCTGGCCTGGTCCGTCTTCC
AGTGGTTCTTCTCCGCCGGGAAGGACTGCGGCTTCAAGACCTTCCCCACCTTCGGCATGGAGGCCTACAGGCAGGGCTTC
TTCTTCGACTTCGGCATGACCAACGTCGGCATCGGCATGATCTGCCCCTACGCGATCACCCTCTCCATGCTCGTCGGGTC
CGCCGTGTCCTGGGGGTTCCTCTGGCCCTACATCGAGACCAAGGAGGGGGACTGGTACCCCGCCGACCTCCGCAGCGGCA
GCCTCAGCGGCATCAAGGGCTACAGGGTGTTCATCGGCGTCTCCATGATCCTCGCCGATGGCCTCTTCAACTTCCTCTCC
ATCATGTTCCGGACGTCGCGCACCATGACCAAGCGCCGCAAGCAGCCCATGTCATCCGCCGGCGGCAACGTGAACCAGCC
GTTCCAGCACCTGATCGGCGAAGGCCCGGACATGGAGCAGCAGAAGACGGCCAAGAGCTTCGACGAACGCCGCAGGGCGC
AGGTCTTCCTCAGGGACAGCATACCCAACATGATTACCATCGGCGTCTACATCCTCCTCGCCGCCCTCTCCACCGCCGCC
GTCCCGATACTATACCGGCAGCTGCGCTACTACCACGTCGCGCTCGTCTACCTCATGGCGCCCCTCTTCACCTTCTGCAA
CGTGTACGGCTACGGCCTCACCGACATGAACCTGTCCAGCACCTACGCCAAGATCACCATGCTGGTCTTCGGTTCCTGGG
TCGGGCTCAGGGACGGCGGTGTGGTTGCCGGCCTCGTCGCCTGCGGGATCATGATGTGCACGCTCTCCAACGGCGGCGAC
GTCATGCAGGACCTCAAGACGGGGTACCTCACCCTCACGTCGCCGCGCGCCGTGCTCATCAGCGAGCTCATCGGCACGGC
ATTCGGCTGCCTCATCAACCCCACCGTCTTCTGGGTGTTCTACAAGGTGTACAAGACGGGGGAGGCCGCCGGCGGCGACA
TCCCCGACGTGCCCTACGCCAGGGTGTACCGCGGCATGGCCATGCTGAGCGTCGGCCAGG---ATGGGCTGCCCAGGCAT
AGCATGCTCCTCGCCAAGATCTTCTTCATGCTCGCGCTGGCCCTGTGCATGCTCCGGGAGCTGGCTAGCCGCTGGGAGTG
GCGCGTGCAGGCGTACCTCCCGAGCACCGTGGCCATGGCCGTGGCCTTCTTCGTGCCGCCGGACATGGCCATCGGCATGT
GCGTCGGGAGCCTGGTGCTGTGGCTGTGGGAGCGCACGGACCCTGTCGAGGAGCGGATGCTGTCGTCGCCGGTGGCGTCC
GGGCTCATCTGCGGGGACGGGCTCGGCTCGCTCGTGTCCTCGCTGCTCACGCTCACCAAGGCCACGGCGCCCATCTGCAT
CAAGTTCTTGTCCCGAGGCGACAACGAGAAGTTGGATGCCTTCTTGGCAAAGATGCCCGCCACATAG-------------
--------------------------------------------------------------------------------
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------------------------
>chr6D_1_TraesCS6D01G049500
CGTAATCACCTCGCATCCCTCCCGTCTCCACTCATGCAAGGGCCCGCTGGCTTGCGCTCGCCTCGGCCTGACTCACGAGA
AACTGCCCATTCAAGCGTTTCCAGCGAGCCAACCTATGGGCTGCTTTAAGAAGCGTGCGATGCAGGCCCAACAATGAAAC
CGGGCAACCAAACAGGCCTCTTCCTTCCCGTGCGGGCCTGGTTGGGCTCGATGCGGGCAACCAAACACGCCCTTCGTTCG
AGAGCACGGGAATGTAGGCAACAAGTCGCTGTCAATCATCAAACTCTTCATGAGACAGAGAGCGCCGGAAAGCCATGTCC
CAGTTATTATCGGAGAGCTCAGAGATGGAGATCTCCAGGTCCGGGTAGTAAGAGAAAAGCGTAGTAAAAGCCACAGCAAG
GGTAGTCTCTCCACACAACCAGTCAAGCAAAAAACGAGTAGAATGGCCATTGCCAACCACAAATCTAACATGATCTTTAA
AATGAGGTCGGACTTTGACAAGATCTTTCCAGAACTGGGAACCGCCGAGGGAAGAGGCAAACATAGGGCTGGAGTTAGGG
AAGTACTTAGCTTTAAGGATGGAGAACCACAAAGAGCCCACCCCACTCTTCATGATTTTCCACCACCATTTAATCTCTAT
ATTTTGGAAACATAGAGATTAGTGTATTCAGTCATAGCTATAACCACTAAA-TGTTAGCGAAGCAAGCAGA---TAGTGC
CTGCTATTTTTGCTTGCATGAGTCTTTGGGGTCGATGGTACTCATGGCAAACTATACTTAGAGCTGAGAAAATATAGCAA
ACCTTACTTAATTAGAAAATGCTTCCTAACCACCAAATGAGGCTCTTCCCCATTTTCTCACTCTCTC-------------
-CCGGCATCATCTGGTTCTGTTCGTGTGTCTTTGGTTTGTCTATCTATCAAACGAACCAAGACACACACATGCACGTGCC
TAG--GCGCCAAGAAATTCCTCAATCAACGACTC-TGAATTTCTTGTGAAGATCGACGAG----AATGGAGTCGGACACA
TGCGACCTCAGCGAAGGCATGTCGACGGAGCGCGCGTACGAGGCGGAGCCGGTGCCGTCGCTGTCGGAGACCATCACGGC
GCGGTCGCTGGCGGTGAGCTTCGTCCTGGGCGTGACCCTCACCGTGGTGGCCATGAAGATCAGCCTCAACTCGGGGTTCC
TCCCGTCGCTCAGCATCCCGGCGTGCCTCCTGGGCTTCTACCTCTCGCGCGCGCTCATCCGGCTGCTGGAGTACCTGGAG
GTGTCCCACCTCCCCTTCACCCGGCAGGAGAACACCGTGATCCAGACCTGCGTCGCCGCCTGCACCACCATCGCCTTCAG
CGGCGGCTTCGGCACGTTCCTCCTGGCCATGGGCCGCAAGTCGGCCGGCGACGACAACGTCAAGTACGACGTCAACGTGG
AGGAGCCGAGCATCCCCCGCATGATCGCCTTCCTCTACCTCGTCAGCTTCGCCGGCATCTTCATCATCATGCCGTTCCGG
AAGGTGATGATCATCCGGCACCAGCTGACGTTCCCCAGCGGCACGGCCACGGCGCACCTCATCAACAGCTTCAACACGCC
GCAGGGCGCCACCCATGCCAAGCTGAAGGTGTCCATGCTGTTCAAGTCGCTCGCGGGCTCCCTGGCCTGGTCCGTCTTCC
AGTGGTTCTTCTCCGCCGGGAAGGACTGCGGCTTCAAGACCTTCCCCACCTTCGGCATGGAGGCCTACAGGCAGGGCTTC
TTCTTCGACTTCGGCATGACCAACGTCGGCATCGGCATGATCTGCCCCTACGCGATCACCCTCTCCATGCTCGTCGGGTC
CGCCGTGTCCTGGGGGTTCCTCTGGCCCTACATCGAGACCAAGGAGGGGGACTGGTACCCCGCCGACCTCCGCAGCGGCA
GCCTCAGCGGCATCAAGGGCTACAGGGTGTTCATCGGCGTCTCCATGATCCTCGCCGATGGCCTCTTCAACTTCCTCTCC
ATCATGTTCCGGACGTCGCGCACCATGACCAAGCGCCGCAAGCAGCCCATGTCATCCGCCGGCGGCAACGTGAACCAGCC
GTTCCAGCACCTGATCGGCGAAGGCCCGGACATGGAGCAGCAGAAGACGGCCAAGAGCTTCGACGAACGCCGCAGGGCGC
AGGTCTTCCTCAGGGACAGCATACCCAACATGATTACCATCGGCGTCTACATCCTCCTCGCCGCCCTCTCCACCGCCGCC
GTCCCGATACTATACCGGCAGCTGCGCTACTACCACGTCGCGCTCGTCTACCTCATGGCGCCCCTCTTCACCTTCTGCAA
CGTGTACGGCTACGGCCTCACCGACATGAACCTGTCCAGCACCTACGCCAAGATCACCATGCTGGTCTTCGGTTCCTGGG
TCGGGCTCAGGGACGGCGGTGTGGTTGCCGGCCTCGTCGCCTGCGGGATCATGATGTGCACGCTCTCCAACGGCGGCGAC
GTCATGCAGGACCTCAAGACGGGGTACCTCACCCTCACGTCGCCGCGCGCCGTGCTCATCAGCGAGCTCATCGGCACGGC
ATTCGGCTGCCTCATCAACCCCACCGTCTTCTGGGTGTTCTACAAGGTGTACAAGACGGGGGAGGCCGCCGGCGGCGACA
TCCCCGACGTGCCCTACGCCAGGGTGTACCGCGGCATGGCCATGCTGAGCGTCGGCCAGG---ATGGGCTGCCCAGGCAT
AGCATGCTCCTCGCCAAGATCTTCTTCATGCTCGCGCTGGCCCTGTGCATGCTCCGGGAGCTGGCTAGCCGCTGGGAGTG
GCGCGTGCAGGCGTACCTCCCGAGCACCGTGGCCATGGCCGTGGCCTTCTTCGTGCCGCCGGACATGGCCATCGGCATGT
GCGTCGGGAGCCTGGTGCTGTGGCTGTGGGAGCGCACGGACCCTGTCGAGGAGCGGATGCTGTCGTCGCCGGTGGCGTCC
GGGCTCATCTGCGGGGACGGGCTCGGCTCGCTCGTGTCCTCGCTGCTCACGCTCACCAAGGCCACGGCGCCCATCTGCAT
CAAGTTCTTGTCCCGAGGCGACAACGAGAAGTTGGATGCCTTCTTGGCAAAGATGCCCGCCACATAGCTTCTTGGCGTGC
AACGTGTGCTTCGTGTAGGTTAACCAAATTATAATTGACCGTGTACAAACTATTCAGGCATATATAGATCTTGGAAAAGT
ATTAAAATCAACCGACGTATCTCTCTCTCGCGTAAACCTCTCCTTCCGCGCGACACGTGTCCCTTGCCCACGCGAGTCCA
CCGCTTCCCCCGCGAGCCTTATCCTCGTCTCGTCCACGCGGCTGCTCGTCCACTCGTTCTTCCTCTCCTCTTTTTCCCTC
TCCTCGTCTCCTCGTCCGTAGCATCCGAGAGGGAGAGCTCGATCCCCTTCGCCATGGCCCCTCCCGTCCAATCCCCGTCC
GCCATGGCCTGCTCCCAAGCTCCACCTGCTGCTCCTCAAGATCCACACCACCTGC-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------TGCAAGACGAAGGCCGGAGTGCAGTCGAAC
GCCGCTCGGCGCCGGCGATGCAGTGCAGCTCGCGGAGCTGCACTGAAGCGCCGCTCGCCGCCGACGGAGTTGCAATGGAC
TGCCACTCGGCGCCGGTGATGCAGTGCGGCTCGCGGAGCTGCACTGAAGCGCCGCTCGCCGGCGACGGAGTTGCAATGGA
GTGCCGCTCGCCGCCGGTGATTGAGTGCGGCACGCGGAGCTGCACTGAAGCGCCGCTCGCCGCC-GATGGAGTTGCAATG
GAGTGCCGCTCGCCGCCGGTGATGCAGTGCCGCACGCGGAGCTGCACTGACGCGCTGATCGCCGCCGACGGAGTTGCAAT
GGAGTGCCGCTCGCCGCCGGTGATGCAGTGCAGCACGCGGAGCTGCACTGACGCGTTGATCGCCGCTGACGGAGTTGCAA
TGGAGTGCTACTCGCCGCCGGTGATGCAGTGCAGCACGCGGAGCTGCACTGAC---------------------------
------------------------------------------------------GCGCCGCTCGCCGCCGATTTGCGGCC
ACAGGTGGGGATCTGTTCGCGTGTGGGGGCGTCTTGTTTCATTGCAATGCAGTGACCGCTACGGGCCGACGGGCTTTGTG
ATCTGCGCTTTACATCGGACGGCC
>chr6A_239
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------CG
AGAGCACGGGGATGTAGGCAACAAGTCGCTGCCAATCATCAAACTCTTCACGAGACAGAGAGCGCCGGAAAGCCAAGTCC
CAGTTATTATCGGAGAGCTCAGAGATGGAGATCTCCGGGTCCGGGTAGTAAGAGAAAAGCGTAGTAAAAGCCACAACAAG
GGTAGTCTCTCCACACAAAAAG-CAAGCAAAAAACAAGTAGAATGGCCATTGCCAACCACAAATCTAATGTGATCTTTAA
AAAAAGGTCGGACTTTAACAAGATCTTTCCCGAACTGGGAACCGCCGAGGGAAGAGGCAAACATAGGGCTGGAGTTAGGG
AAGTACTTAGCTTTAAGGATGGAGAACCACAAGGAGCCCACCCCACTCTTCATGATTTTCCACCACCATTTAATCTCTAT
ATTTTGGAAACATAGTGATTAGTGTATTCAGTCATAGCTATAACCACTAAAATGTTAGTGAAGCAAGCAGA---TAGTGC
ATGTTATTTTTGCTTGCATGAGTCTTTGGGGTCGATGGTACTCATGGCAAACTATACTTAGAGCTGAGAAAATATAGCAA
ACCTCACTTAATTAGAAAATGCTTCCTAACCACCAAATGAGACTCTTCCCCATTTTCCCAC-------------------
-----CATCATCTGGTTCTGTTCGTGTGTCTTTGCTTTGTCTGTCTATCAAACGAACCAAGGCACACACATGCACGTGCC
TAAGCGCGCCAAGAAATTCCTCAATCAACCAGCCTTGAATTTCTTGTGAAGATCGACGTACGACAATGGAGTCGGACACA
TGCGACCTCAGCGAAGGCATGTCGACGGAGCGCGCGTACGAGGCGGAGCCGGTGCCGTCGCTGTCGGAGACCATCACGGC
GCGGTCGCTGGCGGTGAGCTTCGTCCTGGGCGTGACGCTCACCGTGGTGGCCATGAAGATCAGCCTCAACTCGGGGTTCC
TCCCGTCGCTCAGCATCCCGGCGTGCCTCCTGGGCTTCTACCTCTCGCGCGTGCTCATCCGGCTGCTGGAGTACATGGAC
GTCTCCCACCTCCCCTTCACCCGCCAGGAGAACACTGTGATCCAGACCTGCGTCGCCGCCTGCACCACCATCGCCTTCAG
CGGCGGCTTCGGCACCTTCCTCCTGGCCATGGGCCGGAAGTCGGCCGGCGACGACAGCGTCAGGTACGACGTCAACGTGG
AGGAGCCGAGCATCCCCCGCATGATCGCCTTCCTCTACCTCGTCAGCTTCGCCGGCATCTTCATCATCATGCCGTTCCGG
AAGGTGATGATCATCCGGCACCAGCTGACGTTCCCCAGCGGCACGGCCACGGCGCACCTCATCAACAGCTTCAACACGCC
GCACGGCGCCACCCAGGCCAAGCTGCAGGTGTCCATGCTGTTCAAGTCGCTCGCGGGCTCCCTGGCCTGGTCCGTCTTCC
AGTGGTTCTTCTCCGCCGGGAAGGACTGCGGCTTCAAGACCTTCCCCACCTTCGGCATGGAGGCCTACAGGCAGGGCTTC
TTCTTCGACTTCGGCATGACCAACGTCGGCATCGGCATGATCTGCCCCTACGCGATCACCCTCTCCATGCTCGTCGGGTC
CGCCGTGTCCTGGGGCTTCCTCTGGCCCTACATCGAGACCAAGGAGGGGGACTGGTACCCCGCCGACCTCGGCAGCGGCA
GCCTCAGCGGCATCAAGGGCTACAAGGTGTTCATCGGCGTCTCCATGATCCTCGCCGACGGCCTCTTCAACTTCCTCTCC
ATCATGTTCCGGACGTCGCGCACCATGACCAAGCGCCGCAAGCAGCCCATGTCATCCGCCGGCGGCAACGTGAACCAGCC
GTTCCAGCACCTCATCGGCGAAGGCCCGGACATGGAGCAGCAGAAGACGGCCAAGAGCTTCGACGAACGCCGCAGGGCGC
AGGTCTTCCTCAGGGACAGCATACCCAACATGGTCACCATCGGCGTCTACATCCTCCTCGCCGCCCTCTCCACCGCCGCC
GTCCCGATACTATACCGGCAGCTGCACTACTACCACGTCGCGCTCGTCTACCTCATGGCGCCCCTCTTCGCCTTCTGCAA
CGTCTACGGCTTCGGCCTCACTGACATGAACCTGTCCAGCACCTACGCCAAGATCGCCATGCTGCTCTTCGGTTCGTGGG
TCGGGCTCAAGGACGGCGGCGTGGTTGCCGGCCTCGTCGCCTGCGGGATCATGATGTGCACGCTCTCCAACGGCGGCGAC
GTCATGCAGGACCTCAAGACGGGGTACCTCACCCTCACCTCGCCGCGCGCCGTGCTCATCAGCGAGCTCATCGGCACGGC
GTTCGGCTGCCTCATCAACCCCACCGTCTTCTGGGTGTTCTACAAGGTGTACAAGACGGGCGGGGCCAACGGCGGCGACA
TCCCCGACGTGCCCTACGCCAGGGTGTACCGCGGCATGGCCATGCTGAGCGTCGGCCAGG---AAGGGCTGCCCAGGCAC
AGCATGCTCCTCGCCAAGATCTTCTTCATGCTCGCGCTGGCCCTGTGCATGCTCCGGGAGCTGGCTAGCCGCTGGGAGTG
GCGCGTGCAGGCGTACCTCCCGAGCACCGTCGCCATGGCCGTGGCCTTCTTCGTGCCGCCGGACATGGCCATCGGCATGT
GCGTCGGGAGCCTGGTGCTGTGGCTGTGGGAGCGCACGGACCCTGTTGAGGAGCGGATGCTGTCGTCGCCGGTGGCGTCC
GGGCTCATCTGCGGGGACGGGCTCGGCTCGCTCGTGTCGTCGCTGCTCACGCTCACCAAGGCCACGGCGCCCATCTGCAT
CAAGTTCTTGTCCCGAGGCGACAACGAGAAGTTGGATGCATTCTTGGCAAAGATGCCCGCGACGTAGCTCCATGGTGTGC
AACGTGTGCTTCGTGTAGGTTAACCAAGTTATAATTGACCGTGTACAAACTATTCAGGCATATAGATCTT----------
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------------------------
>chr6B_638
--------------------------------------------------------------------------------
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-----------------------------------------------------------------------------TAT
ATTTTCGAAACATAGAGCTTTGTGTATTCAGTCATAGCTATGACCACT-AAATGTTAGCGAAGCAAGCAGATAGTAGTGC
ATGCTATTTTTGCTTGCATGAGTCTCTAGGGTCGATGGTACTCATGACAAACTATACTTAGAGCTGAGAAAATATAGCAA
ACCCTACTTAATTAGAAAATGCTTCCTAACCACCAAATGAGACTCTTCCCCATTTCCACTCTCTCTCTCTCTCTCTCTCT
CCCGGCACCATCTGGTTCTGTTCGTGTGTCTTTGGTTTGTCTATCTATCAAACGAACCAAGACACACACATGCACGTGCC
TTAGCGCGCCAAGAAATTCCTCAACCAACCAACCTTGAATTTCTCGTGAAGATCGACGTACGGCAATGGAGTCCGACACA
TGCGACCTCAGCGAAGGCATGTCGACGGAGCGCGCGTACGAGGCGGAGCCGGTGCCGTCGCTGTCGGAGACCATCACGGC
GCGGTCGCTGGCGGTGAGCTTCGTCCTGGCCGTGACCCTCACGGTGGTGGCCATGAAGATCAGCCTCAACTCAGGGTTCC
TCCCGTCGCTCAGCATCCCGGCGTGCCTCCTGGGCTTCTACCTCTCGCGCGCGCTCATCCGGCTGCTGGAGTTCATGGAG
GTGTCCCACCTCCCCTTCACCCGGCAGGAGAACACCGTGATCCAGACCTGCGTCGCCGCCTGCACCACCATCGCCTTCAG
CGGCGGCTTCGGCACGTTCCTCCTGGCCATGGGCCGGAAGTCGGCCGGCGACGACCACGCAAGGCACGACGTGAACGTGG
AGGAGCCGAGCATCCCCCGCATGATCGCCTTCCTCTACCTCGTCAGCTTCGCCGGCATCTTCATCATCATGCCGTTCCGG
AAGGTGATGATCATCCGGCACCAGCTGACGTTCCCCAGCGGCACGGCCACGGCGCACCTCATCAACAGCTTCAACACGCC
GCAGGGCGCCACCCATGCCAAGCTGCAGGTGTCCATGCTGTTCAGGTCGCTCGCAGGCTCCCTGGCCTGGTCCGTCTTCC
AGTGGTTCTTCTCCGCCGGGAAGGACTGCGGCTTCAAGACCTTCCCCACCTTCGGCATGGAGGCGTACAGGCAGGGCTTC
TTCTTCGACTTCGACATGACCAACGTCGGCATCGGCATGATCTGCCCCTACGCGATCACCCTCTCCATGCTCGTCGGGTC
CGCCGTGTCCTGGGGGTTCCTCTGGCCCTACCTCGAGACCAAGGAGGGGGACTGGTACCCCGCCGACCTCCGCAGCGGCA
GCCTCAGCGGCATCAAGGGCTACAGGGTGTTCATCGGCGTCTCCATGATCCTCGCCGACGGCCTCTTCAACTTCCTCTCC
ATCATGTTCCGGACGTCGCGCACCATGACCAAGCGGCGCAAGCAGCCCATGTCATCCGCCGGCGGCAACGTGAAGCAGCC
GTTCCAGCACCTGATCGCCGAAGGCCCGGACATGGAGCAGCAGAAGACGGCCAAGAGCTTCGACGAACGCCGCAGGGCGC
AGGTGTTCCTCAGGGACAGCATACCCAACATGGTCACCATCGGCGTCTACATCCTCCTCGCCGCCCTCTCCACCGCCGCC
GTCCCGATACTATACCGGCAGCTGCACTACTACCACGTCGCGATCGTCTACCTCATGGCGCCCCTCTTCACCTTCTGCAA
CGTGTACGGCTACGGCGTCACCGACATGAACCTGTCCAGCACCTACGCCAAGATCACCATGCTGGTCTTCGGTTCCTGGG
TCGGGCTCAGGGACGGCGGTGTGGTTGCCGGCCTCGTCGCCTGCGGGATCATGATGTGCACGCTCTCCAACGGCGGCGAC
GTCATGCAGGACCTCAAGACGGGGTACCTCACCCTCACCTCGCCGCGCGCGGTGCTCATCAGCGAGCTCATCGGCACGGC
ATTCGGCTGCCTCATCAACCCCACCGTCTTCTGGGTGTTCTACAAGGTGTACAAGACGGGCGAGGCCGCCGGCGGCGACA
TCCCCGACGTGCCCTACGCCAGGGTGTACCGCGGCATGGCCATGCTGAGCGTCGGCCAGG---ACGGGCTGCCCAGGCAC
AGCATGCTCCTCGCCAAGATCTTCTTCATGCTCGCGCTGGCCCTGTGCATGCTCCGGGAGCTGGCTAGCCGCTGGGAGTG
GCGCGTGCAGGCGTACCTCCCGAGCACCGTGGCCATGGCCGTGGCCTTCTTCGTGCCGCCGGACATGGCCATCGGCATGT
GCGTCGGGAGCCTGGTGCTGTGGCTGTGGGAGCGCACGGACCCTGTCGAGGAGCGGATACTGTCGTCGCCGGTGGCGTCC
GGGCTCATCTGCGGGGACGGGCTCGGCTCGCTCGTGTCGTCGCTGCTCACGCTCACCAAGGCCACGGCGCCCATCTGCAT
CAAGTTCTTGTCCCGAGGCGACAACGAGAAGTTGGATGCCTTCTTGGCAAAGATGCCCGCCACATAGCTTCTTGG-----
----TGTGCTTCGTGTAGGTTAACCAAATTATAATTGACCGTGTACAAACTATTCAGG----------------------
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------------------------
>chr2A_1409
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------AACGTGG
AGGAGCCGGAGATCGGCCGGATGATCGTCTTCCTCCTCCTCACCAGCTTCGCCGGCCTGTTCGCCATCATGCCGTTCAGG
GACAGCCTCATCGTCCACCGCCGGCTGACGTTCCCCAGCGGCACGGCCACGGCGCACCTCATCAACACCATGCACACTCC
CCAGGGCGCCAAGCAAGCCGGCCAGCAACTGGCGATGTTGTCGAAGACCTTATTTGGGACCGTTGCATGGTCGATCTTCG
AGTGGTTCTTCGGCGTCCGCAAGGGCTGTGGCTTGCAGGCGTTCCCGGTGTTTGGCCTCAGCGCTTTTCAACGAGGGTTC
TACTTCGATTTCTCCATGACCAACGTCGGCGTCGGGATGTTCTGCCCGTACAAGATCACCATCTCGATGCTGGCGGGATC
CTTGGTCTCGTGGGGGCTCATCTGGCCCTACATCCAGACGAAGGAGGGGGACTGGTACCCGCAGGGCCTCGACCACGACA
ACATCAGCGGCATCAATGGCTACCGGGTGTTCATCGGGGTATCCATGATCCTCGCCGACGGGCTCCTACACATGCTCTGC
ATCCTGGTTCAGACGCTCTACACCATGTACAAGCAACAGGAGAACCATCAGCCGAGGCAGAGCAGCAACGG---GCAGCC
GTTCCGGTGCCTTAGCGTCGTCCTCGACCGGTCGGCGTCC---------------AGCTTCGACGACCGCCGGAGGACGC
AGGTGTTCCTCCGGGACCGGGTCCCCGCCATGGCGCCCGTCGTCGGGTACGTGGTCCTGTCAGTCATCTCCACCGTCGTC
ATACCGCAGCTCTACCCCCAGCTGAGGTACCACCACGTGGCCTTAGCCTACATCATCGCGCCGGTGTTCGCCTTCTGCAA
CGCCTACGGCAACGGCATCACGGACATGAACATCGCGACCACCTACGGGAAGGTCTCGCTACTCATCTTCAGCTCGTGGG
TGGGGCTCAAGGACGGCGGCGTGGTGGCCGGGCTGGCCGCCTGCGCCATCATCGTGTCCAACGTGTCCACCGCGTCCGAC
CTGATGCAGGACCACAAGACGGGCTACATCACCCTCACCTCGCCGCACACCATCACCATCTGCCAGGTCGCCGGCACGGC
GCTCGGCTGCGTGGTGAACCCCGTCATCTTCTCCATCTTCTACAGCGTGTACAACAGCGGCGCCCACGACGACAGCAACA
GCATCGGC---CCGTACGCCAAGGTGTACCGGGGGATCGCCATGCTCGCCATGACCGAGAAGAACGGGCTTCCCAGGCAC
ACCATGCTGCTCTGCAAGGTCTTCCTGGCGCTGGCGCTGTCCATCAGCGTGCTCCGGGAGGTGTCGACGCACAAGAAGTG
GCGCGTCCTGAGGTACATCCCGAGCACCATCGGCATGGCCGTGGCCTTCTTCGTGCCGCCCACGATCCCCGTGGGCATGG
CGCTGGGCAGCGCCGTGATCTACCTGTGGGGGAGGTTCGACCGCGACGACATGCGGCTCATGTCGCCGGCGGCGGCGTGC
GGGCTGATCTGCGGGGACGGGTTCGGGTCGCTGCTGTCGTCGGCGCTCACGCTGCTCAAGGCCACCCCGCCGATCTGCAT
CATGTTCGTGGCTCGAGG--------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------
>chr2D_1409
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-------------------------------------------------------------------------AACGTGG
AGGAGCCGGACATCGGCCGGATGATCGTCTTCCTCCTCCTCACCAGCTTCGCCGGCATCTTGGCCATCATGCCGTTCAGG
GACAGCCTCATCGTCCACCGCCGGCTGACGTTCCCCAGCGGCACGGCCACGGCGCACCTCATCAACACCATGCACACTCC
CCAGGGCGCCAAGCAAGCCGGCCAGCAACTGGCGATGTTGTTGAAGACCTTATTTGGGACCGTTGCATGGTCCATCTTCG
AGTGGTTCTTCGCCGGCCGCAGTGGGTGTGGCTTCCAGGCGTTCCCGGTGTTTGGCCTCGGCGCTTTTCGACGAGGGTTC
TACTACGATTTCTCCATGACCAACGTCGGCGTCGGGATGTTCTGCCCGTACAAGATCACCATCTCGATGCTCACGGGATC
CTTGGTCTCGTGGGGGCTCATCTGGCCGTACATCCAGACGAAGGAGGGGGACTGGTACCCGCAGGGCCTCGACCGCGACA
ACATCAGCGGCATCAATGGCTACCGGGTGTTCATCGGGGTATCCATGATCCTCGCCGACGGCCTCCTACACATGCTCTGC
ATCCTGGTTCGGACGCTCTACGCCATGTACAAGAACCCG---------CAGCCGAGGCAGAGCAGCAACGG---GCAGCC
GTTCCGGTGCCTTAGCGTCGTCCTCGACCGGTCGGCGTCC---------------AGCTTCGACGACCGCCGGAGGACGC
AGGTGTTCCTCCGGGACCGGGTCCCCGCCACGGTGCCCGTCGTCGGGTACGTGGTCCTGTCGGTCATCTCCACCCTCGTC
ATACCGCAGCTCTACACCCAGCTGAGGTACCACCACGTGGCCTTCGCCTACATCATCGCGCCGGTGTTCGCCTTCTGCAA
CGCCTACGGCAACGGCATGACGGACATGAACATCGCGACCACCTACGGGAAGGTCTCAATACTCATCTTCAGCTCGTGGG
TGGGGCTCAAGGACGGCGGCGTGGTGGCCGGGCTGGCCGCCTGCGCCATCATCGTGTCCAACGTGTCCACCGCGTCCGAC
CTGATGCAGGACCACAAGACGGGCTACATCACCCTCACCTCGCCGCACACCATCACCATCTGCCAGGTCGCCGGCACGGC
GCTCGGCTGCGTGGTGAACCCCGTCATCTTCTCCATCTTCTACAGCGTGTACAACAGCGGCGCCCACGACGACAGCAACA
GCATCGGC---CCGTACGCCAAGGTGTACCGGGGGATCGCCATGCTCGCCATGACCGAGAAAAAGGGGCTGCCCAAGCAC
ACCATGCTGCTCTGCAAGGTCTTCCTGGCGCTGGCGCTGTCCATCAGCGTGCTCCGGGAGGTGTCCACGCACAAGAGGTG
GCGCGTCCTGAGGTACATCCCGAGCACCATCGGCATGGCAGTGGCCTTCTTCGTGCCGCCCACGATCCCCGTGGGCATGG
CGCTGGGCAGCGCCGTGATCTACCTGTGGGGAAGGTCCGACCGCGACGACATGCGGCTCATGTCGCCGGCGGCGGCGTGC
GGGCTGATCTGCGGGGACGGGTTCGGGTCGCTGCTGTCGTCGGCGCTCACGCTGCTCAAGGCCACCCCGCCGATCTGCAT
CATGTTCGTGGCTCGAGG--------------------------------------------------------------
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>chr1D_3164
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-----------------------------------------------------------------------TGGAAAAGT
ATTAAAATCAACCGACGTATC--TCTCTCGCGTAAACCTCTCCTTCCGCGCGACACGTGTCCCCTGCCCACGCGAGTCCA
CCGCTTCCCCCGCGAGCCTTATCTCTTTT-----CACGCGGCTGCTCGTCCACTCGTTCTTCCTCTCGTCTTTTTCCCTC
TCCTCGTCTCCTCGTCCGTAGCATCCGAGAGGGAGAGCTCGATCCCCTTCGCCATGGCCCCTCCCGTCCAATCCCCGTCC
GCCATGGCCTGCTCCCAAACTCCACCTGCTGCTCCTCAAGATCCATACCACGGCGTCGTGACGCGGTAACGCGGCCCTCG
TCGTTGACTCGGATGCTGCAGGTGTTTGCGGCCCAACGACTCGACGGTGCTGCCGTCGTTGAAACGCGACTCTCGTCGAC
GACGGTGCTGCAATGCAGCACGCATGGGCTGCTCGCTGCCGGTATTGCAGTGCAAGACGAAGGCCGGAGTGCAGTCGAAC
GCCGCTCGGCGCCGGCGATGCAGTGCAGCTCGCGGAGCTGCACTGAAGCGCCGCTTGCCGCCGACGGAGTTGCAATGGAC
TGCCGCTCGCCGCCGGTGATGCAGTGCAGCTCCGCGAGCTGCACTGAAGCGCCGCTCGCCGCCGACGGAGTTGCAATGGA
GTGCCGCTCGCCGCCGGTGATTGAGTGCGGCACGCGGAGCTGCACTGAAGCCCCGCTCGCCGCCTGACGGAGTTGCAATG
GAGTGCCGCTCGCCGCCGGTGATGCAGTGCCGCACGCGGAGC--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------TGCACTGAC---------------------------
------------------------------------------------------GCGCCGCTCGCCGCCGATTTGCGGCC
ACAGGTGGGGATCTGTTCGCGTGTGGGGGCGTCTTGTTTCATTGC-----------------------------------
------------------------
>chr1D_3200
--------------------------------------------------------------------------------
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---------------------------TCGCGTAAACCTAGTCCTCTGCGCGACACGTGTCCCCTGCCCACGCGAGTCCA
CCGCTTCCCCCGCGAGCCTTATCTCTTTT-----CACGCGGCTGCTCGTCCACTCGTTCTTCCTCTCGTCCTTTTCCCTC
TCCTCGTCTCCTCGTCCGTAGCATCCGAGAGGGAGAGCTCGATCCCCTTCGCCATGGCCCCTCCCGTCCAATTCCCGTCC
GCCATGGCCTGCTCCCAAGCTCCACCTGCTGCTCCTCAAGATGCACACCACGGCGCCGTGACGCGGTAACGCGGCCCTCG
TCGTTGACTCGGATGCTGCAGGTGTTTGCGGCCCGACGACTCGACGGTGCTGCCGTCGTTGAAACGCGACTCTCGTCAAC
GACGGTGCTGCAATGCAGCACGCATGGGCTGCTCGCTGCCGGTATTGCAGTGCAAGACGAAGGCCGGAGTGCAGTCGAAC
GCCGCTCGGCGCCGGCGATGCAGTGCAGCTCGCGGAGCTGCACTGAAGCGCCGCTCGCCGCCGACGGAGTTGCAATGGAC
TGCCGCTCGGCGCCGGTGATGCAGTGCAGCTCGTGGAGCTGCACTGAAGCGCCGCTCGCCGCCGACGGAGTTGCAATGGA
GTGCCGCTCGCCGCCGGTGATCGAGTGTGGCACGCGGAGCTGCACTGAAGCGCCGCTCGCCGCC-GACGGAGTTGCAATG
GAGTGCCGCTCGCCGTCGGTGATGCAGTGCCGCACGCGGAGC--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------TGCACTGACGCGCTGATCGCCGCCGACGGAGTTGCA
ATGGAGTGCCGCTCGCCGCCGGTGATGCAGTGCAGCACGCGGAGCTGCACTGACGCGCCGCTCGCCGCCGATTTGCGGCC
ACAGGTGGGGATCTATTCGCGTGTGGGGGCGTCTTGTTTCATTGCAATGCAGTGACCGCTACGGGCCGACGGGCTTTGTG
A-----------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--
----------S--------------------S------------------S------------------------S----
------------------------------------S--------------------------------------S----
------------------SS--S------------S--------------------------------SS----------
--SS------------S-------------S-------------------------------------------------
--------------------------------S-----------------------------------------------
--------------------------------------------------------------------------------
S-------------------------------------------------------------------------------
-----------------------------------------S---------------S----------------------
--------------------------------------------------------------------------------
--S--------------------------S-SS-------------------------SS--------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------S-----
--------------------------------------------------------------------------------
------------------------------------S-------------------------S-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------S------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------S---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------S-S---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------S-----------------------------------------
------------------------------------------------------------S-------------------
----------------------------------------------------------------S--------------S
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------S-----------------------------------------
---------------------------------------------------------------------------S----
----------------------------------------------------------------S-SS-SS---------
---------------------SS----------------------------------------S----------------
-----------------------SSSS-SSSSSS---------------------------------S------------
--------------------------------------------------------------------------------
---------------------------------------------------SSSS-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----S----------------------S-----S---------------------------S------------------
-------------------------------------------------------------------S------------
------------------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-SSSSSSSSSSSSSSSSSSSSSSS
>forward_88
--------------------------------------------------------------------TGACTCACGAGA
AACTGCCC------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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------------------------
>reverse_1979
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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----------------------------------------------------------TGGCCTCTTCAACTTCCTCTC-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------
>forward_162
--------------------------------------------------------------------------------
--------------------------------------------------------------CAGGCCCAACAATGAAAC
CG------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------
>reverse_2195
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------TACCATCGGCGTCTACATCC--------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------
>forward_272
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------TGTAGGCAACAAGTCGCTGT------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------
>reverse_3188
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------ATCTTGGAAAAGT
ATTAAAATCAACCG------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------
