>input_sequence_38245
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--------------------------------------------------------------------ATGTCGTCGCCA
CAA------CCGCCGGCAGCCGAGCCCGCCACCCCCACCGCCGCGGAGATGTCGCCGCCGGAGGCGCGGCTGGCGATGAT
GGAGCTGGCGAACATGATCGCCGTCCCGATGGCGCTGACGGCCGTCATCCGGTTGGGCGTGCCGGCCGCGGTGTGGGCGG
GCGGCGCCAACGCGCCGCTCTCGGCCGCGGAGCTGCTCCCGCCGGGCCACCCGGACCCGTCCGTCCTCGAGCGGCTCCTC
CGCCTGCTGGCATCCCGCGGCGTCTTCTCCGAGCACGCCGCCGACCCCTCCGGCGGCCCGGAGCGCCGGTACGCGCTGAC
CGCCGTGGGGCGCACCCTGGTGCCCTCCGGCCCCTCCGGCGCCTCGTACGCCGACTACGTGCTGCAGCACCACCAGGACG
CGCTGGTGCTGGCGTGGCCGCGCCTCCACGAGGCCGTGCTCGACCCCGCCGGTCCCGAGCCCTTCGCGCGCGCCCACGCC
GGCGTCCCCGCCTACGCCTACTACGGGCAGGACCGGGCGGCCAACGAGGTGATGCTCCGCGCCATGACCGGCGTGTCGGA
GCCCTTCATGCAGGCGCTGCTGGACGGGTACGAGGGCGGGTTCGAGGGCGTGGCCACGCTGGTCGACGTCGGCGGCAGCT
CCGGCGCCTGCCTGGAGATGATCATGCGCCGGGTGCCCACCATCCGGGAGGGCGTCAACTTCGACCTGCCCGACGTCGTC
GCCGCCGCGCCCCCCATCGCCGGTGAGACCCTCGATCGATCCCCACCAATTCCCCT-------CTACCCTGCCCACCTCA
TACAGCTTGCACGGACAT--------------------------------------------------------------
----------AGCACCACAACTGACGGTGACAATGGCACGAGCCATCGGTCGACGGATCGATCACAAGAATGCCTCCCCA
GTCCCCACCAACCAGCCGACCGGAGCAGACATGGCACACGTGAGTCACGAGATTGTGTTTGTGGTAGCGTACACCGGCAG
ATCG--------------------------TGGATGTACCGCCACCACACACGGAGAT----AATCTAAAGAAACAGATG
TTGTTTTCGACGGCGTCGACATCAGT---AGCAGACGGGTTTGATAATGAGGTTTCCGAGCGCACTTATTAGGGTAAACT
ATGCATGATGCACTCATGCCCATGCTGGCTTGAGAATTTTTTACCTCTTCAGACTTCGGCAGCAGACGTGCTGGGTTTTT
GGGCAGTTCTTGTCCCTACCTAACATGCTGACAATGAAATGGTAGGCATGGTTTTTGGTGCATTTTTTTGTTTGTTGGAT
TTGGATTTGTAGCGCACTTGTGGTAGATTATGTAATC-CTTACTATCTTGGGTTCAGAAGTTTTACCTGTTCGGAGTTCA
GAGTGTCAACATCAGCAGTAGATGAGTTTGATAGTGAGGTTGGT-TTCAGAGTGCACTTATGGTAAACTATGCTGCCCTT
GCCATATTGGCTTCAGAAAAATCCACA-----TGTTCATAGTTCAGTCTGATTGCGCTGGTCACATGAAGCAAC------
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---------------------------------------------------------------------------CACAG
CTCTCCAGATTTTCAGTCCATTTTGTCCCTGCCTAACCTGCTAAAATGGT------------------------------
------------------------AGTAGTATTTAAATTCACAGTATCAAG-----ACATGCATATTTCTGAA-------
--TAACAATGGTGACACCTGCAAATT-AAAATGCAGGAGTAAAGCATGTTGGTGGAGACATGTTCAAGTCCATCCCCTCC
GGCGACGCCATCTTCATGAAGGTGTGTGTGTATCACGCTG---------TGAAATTCAGACACCCCCGGTCACAT-ATTG
CCGAAATCAAACAAGATTTGATCTGATCCACATCTTGTTTTAATCCCTCCAGTGGGTTCTGACGACATGGACCAACGACG
AGTGCACGGCGATCCTCAAGAAGTGCCACGAGGCGCTGCCGGAGGGCGGGAAGCTGATCGCGTGCGAGCCGGTGGTGCCG
GAGACGACGGACGCCAGCACGAGGACGAGGGCGCTGCTGGAGAACGACATCTTCGTCATGACCACCTACCGGACCCAGGG
GAGGGAGCGGTCCGAGGAGGAGTTCCGGCAGCTCGGCCTCACCGCCGGCTTCGCCGGCTTCCGGGCCCTCTACCTCGACC
CTTTCTATGCCGTCCTCGAGTATGTCAAGTGA------------------------------------------------
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>chr6B_1_TraesCS6B01G449400
TCGTCCATATAGCCGAGCCTTCCACTGTCGGCGCCGCCACGGATATCTCCCAAGTATATAGAATCTTTTTTGTTAAGTTA
AAATTTAATTATGTGCATAAAAAAAGTTATTTACATGTACAACACAAAAAAATATAAAATTGCATCTTATGGTGAATCTA
ATGAGGTCCTGGTTTATTGGTCTTCTTCGTATTTTATCCCAAAATTTGATCATATATTTAACTGGTAAAATGTTAATGCA
TGTGATAAAGAAATTATATCGTTGGCTTCATATTGTTTTAATGATACTATTTTTTGTGACATGCATTAACATTTTGCTAA
TTAAATCCATGGTCAAAATTTGTCACAAAATACTAAGGGGGCCAACAAACCAGGACGGGGTAGTATATATATGGCATTCT
AGATGTAAATGTATTTCTTCACAAACTTTATCAAATTCTATGAGGTGAAACGGA------------------------GA
AGTAATAGTAGGCTAAATTTAT----TAAACTAACCATTAATCGAAACAAGATTGAACTAATCATCGCACGAGATAACGA
AGCCATCTCGAAAGCAACCACTATAAAATACTATCGGCGAATCCCCTCAAATCAATTTTTTTTAAGAAAATCATTGGAGA
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNCACACACACTCGCACTCTCTCCAACCGTACTCCTCTCCCTCTCCACGCTGCCATGCG
GCCCCGCTGTTACGTTGGTCCCACATGTCATTCTCTGGAAGGGAGCATCCTGTGGTACAGGCGGCAGCGTGCACCTATAT
AGCCGATAGATGTGGCGCCGCAGGGATGGACCGGACTCGCTCACTCCCACCACTCCACCTCATCGAGAATGTCGTCGCCA
CAA------CCGCCGGCAGCCGAGCCCGCCACCCCCACCGCCGCGGAGATGTCGCCGCCGGAGGCGCGGCTGGCGATGAT
GGAGCTGGCGAACATGATCGCCGTCCCGATGGCGCTGACGGCCGTCATCCGGTTGGGCGTGCCGGCCGCGGTGTGGGCGG
GCGGCGCCAACGCGCCGCTCTCGGCCGCGGAGCTGCTCCCGCCGGGCCACCCGGACCCGTCCGTCCTCGAGCGGCTCCTC
CGCCTGCTGGCATCCCGCGGCGTCTTCTCCGAGCACGCCGCCGACCCCTCCGGCGGCCCGGAGCGCCGGTACGCGCTGAC
CGCCGTGGGGCGCACCCTGGTGCCCTCCGGCCCCTCCGGCGCCTCGTACGCCGACTACGTGCTGCAGCACCACCAGGACG
CGCTGGTGCTGGCGTGGCCGCGCCTCCACGAGGCCGTGCTCGACCCCGCCGGTCCCGAGCCCTTCGCGCGCGCCCACGCC
GGCGTCCCCGCCTACGCCTACTACGGGCAGGACCGGGCGGCCAACGAGGTGATGCTCCGCGCCATGACCGGCGTGTCGGA
GCCCTTCATGCAGGCGCTGCTGGACGGGTACGAGGGCGGGTTCGAGGGCGTGGCCACGCTGGTCGACGTCGGCGGCAGCT
CCGGCGCCTGCCTGGAGATGATCATGCGCCGGGTGCCCACCATCCGGGAGGGCGTCAACTTCGACCTGCCCGACGTCGTC
GCCGCCGCGCCCCCCATCGCCGGTGAGACCCTCGATCGATCCCCACCAATTCCCCT-------CTACCCTGCCCACCTCA
TACAGCTTGCACGGACAT--------------------------------------------------------------
----------AGCACCACAACTGACGGTGACAATGGCACGAGCCATCGGTCGACGGATCGATCACAAGAATGCCTCCCCA
GTCCCCACCAACCAGCCGACCGGAGCAGACATGGCACACGTGAGTCACGAGATTGTGTTTGTGGTAGCGTACACCGGCAG
ATCG--------------------------TGGATGTACCGCCACCACACACGGAGAT----AATCTAAAGAAACAGATG
TTGTTTTCGACGGCGTCGACATCAGT---AGCAGACGGGTTTGATAATGAGGTTTCCGAGCGCACTTATTAGGGTAAACT
ATGCATGATGCACTCATGCCCATGCTGGCTTGAGAATTTTTTACCTCTTCAGACTTCGGCAGCAGACGTGCTGGGTTTTT
GGGCAGTTCTTGTCCCTACCTAACATGCTGACAATGAAATGGTAGGCATGGTTTTTGGTGCATTTTTTTGTTTGTTGGAT
TTGGATTTGTAGCGCACTTGTGGTAGATTATGTAATC-CTTACTATCTTGGGTTCAGAAGTTTTACCTGTTCGGAGTTCA
GAGTGTCAACATCAGCAGTAGATGAGTTTGATAGTGAGGTTGGT-TTCAGAGTGCACTTATGGTAAACTATGCTGCCCTT
GCCATATTGGCTTCAGAAAAATCCACA-----TGTTCATAGTTCAGTCTGATTGCGCTGGTCACATGAAGCAAC------
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---------------------------------------------------------------------------CACAG
CTCTCCAGATTTTCAGTCCATTTTGTCCCTGCCTAACCTGCTAAAATGGT------------------------------
------------------------AGTAGTATTTAAATTCACAGTATCAAG-----ACATGCATATTTCTGAA-------
--TAACAATGGTGACACCTGCAAATT-AAAATGCAGGAGTAAAGCATGTTGGTGGAGACATGTTCAAGTCCATCCCCTCC
GGCGACGCCATCTTCATGAAGGTGTGTGTGTATCACGCTG---------TGAAATTCAGACACCCCCGGTCACAT-ATTG
CCGAAATCAAACAAGATTTGATCTGATCCACATCTTGTTTTAATCCCTCCAGTGGGTTCTGACGACATGGACCAACGACG
AGTGCACGGCGATCCTCAAGAAGTGCCACGAGGCGCTGCCGGAGGGCGGGAAGCTGATCGCGTGCGAGCCGGTGGTGCCG
GAGACGACGGACGCCAGCACGAGGACGAGGGCGCTGCTGGAGAACGACATCTTCGTCATGACCACCTACCGGACCCAGGG
GAGGGAGCGGTCCGAGGAGGAGTTCCGGCAGCTCGGCCTCACCGCCGGCTTCGCCGGCTTCCGGGCCCTCTACCTCGACC
CTTTCTATGCCGTCCTCGAGTATGTCAAGTGATCGGTGGCTTATTAGATCTCACCTCTCCACCCAATTGTTTTCTCCCAT
GTAAAAGAATTTGAACAAGGAGGTCGGGTGTATGACTC-CTGTTAGGT--------------TGGACATGCGTTTTGAGT
TCTGAG--------------------------------------------------------------------------
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-------------------------------------------------------ATGTTATCTTGAGATAGAGTGAATC
AAGCGCATTTGTCGGAACTCGAAAAAAGTTACACACATGTTGAATTAAGGGCATTTGTATTACCCTAAAGTAAAAAAAAA
AAAGAACAAAGAAAACTTCAAGCAAATGGTGACAAAAAGTTACACACATATTGCATACAACTTGCATTGTGTGGCAACGA
CCATGGTGGCCAGAGCCAGGTCGCGGCTTGTCCTTCTGATGTCGACAGTCCGGTGCGCCAATGGGTGTGCCTATACTGAT
ATCTAGTTGTGACAGAGAAGTCGAAGCTGCGGGGTTTTTAATGGGCGGTGCTTTCCGAACGTTACGCTGGAGTAGGACGG
TATGAGGCTTGCAACTATCATATGTGAAGCTGTTAGCAAAATCAGAGCTGCCTTGTCCTCGATGCTTTGGTTTATTGTTT
GGAGTTTGTGCCTAGGCCGTCCGCATGTGTCCCTTGTAGGGTTTGTAATCTATTTTTTGCCCGGTTTTCCTCTAATTAAC
CGGACAACTCTTTTCTTCTTAATCAATGAAAATGGTAATTTTCTTTGCCTCATTTCAAAAAAAACTTGCATTGTGTAACT
TCCATTTTTCTTTAAATCACATATAACTGTATCCAAAGCTCGACAACCATTACCAGTGCTATA-TTTGGATCATAGACCC
AAGAAATTGCAAAGTAACTC--ATGACTAAAAATTACAACAAAATCTCTCAAAGACTTATTTTCCATGGCAACAAGCTCC
GCAATATGAAATACCA-CGAGATTTCAACGAAGCCATAGCAATCTGATCGTATTAGCGGCACCACCAACCATATACATGC
ACAAAGTTGACTACCTTCAAAGGTTCTCGAAAGCTCCATGACCCG-CCATCCAAAAAGATG
>chr6A_401
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AGATGTAAATGTATTTCTTCACAAACTTTATCAAATTTTATGAGGTTTGACTTAAAAAAACTATATGCATCACATTATGA
AGTAATAGTAGGCTAAATTTATATATTAAACTAACCACTAATCGAAAAAAGATTAAACTAACCATCGCACGAGATAACGA
AGCCATCTCGAAAGCAACCACTATAAAATAGTATCGGCGAATCCCCTCAAATCAAAATATA-TAAAAAAAACATTGGTGA
ACGGATCCGATTTGATGGCCACATGAGGTGACGTGCCGCCACGCGGTCATCCCCCCA-----------------------
--------------------------------------------------------------------------------
------------------------------GTTCGCACTCTCTCCACCTGTACCCCGGTCCCTCTGCACGCTGCCATGGG
ACCCCGGTGGTACGTCGGCCCGACATGTCATTCTCCGGAAGGGACAATCCTGTGGTACGGGCGGCAGGGTGTACCTATAT
AGCCGATAGATGTGGCGCCGCAGGGATGGACCGGGCTCGCTCACTCCCACCACTCCACCTCATCGAAAATGTTGTCGAC-
--------GCCGCCGGCAGCCGGAGTAGCGGAGGAGCTTA------------CGCCGCCGGAGGCGCGGCTGGCGATGAT
GGAGCTGGCGAACATGATCGCCGTCCCGATGGCGCTGACGGCCGTCATCCGGCTGGGCGTGCCGGCCGCGGTGTGGGCGG
GCGGCGCCAACGCGCCGCTCTCGGCCGCGGAGCTGCTCCCGCCGGGCCACCCGGACCCGTCCGTCCTGGAGCGGCTCCTC
CGCCTGCTCGCCTCCCGCGGCGTCTTCTCCGAGCACGCAGCCGACGGCC------GCCCGGAGCGCCGGTACGCGCTGAC
GGCCGTGGGGCGCACCCTGGTCCCCTCGGGCGCCTCCGGCGCGTCGTACGCCGACTACGTGCTGCAGCACCACCAGGACG
CGCTGGTGCTGGCGTGGCCGCGGCTGCACGAGGCCGTGCTCGACCCCGCCGGGCCCGAGCCCTTCGCGCGCGCCCACGCC
GGCGTTCCCGCCTACGCCTACTACGGCCAGGACCGGGACGCGAACGAGGTGATGCTCCGCGCCATGACCGGCGTGTCGGA
GCCGTTCATGGAGGCGCTGCTGGACGGGTACGAGGGCGGGTTCGAGGGCGTGGCCACGCTGGTCGACGTCGGCGGCAGCT
CCGGCGCCTGCCTGGAGATGATCATGCGCCGGGTGCCCACCATCCGCGAGGGCGTCAACTTCGACCTGCCCGACGTCGTC
GCCGCCGCGCCCACCATCGCCGGTGAGACCCTCAATCGATCCCCCAA---TCCCCT-------CTACCCTACCTACCTCA
TACGGATTGCTCGTAGGATATTATTTCTATCATCGATCCAGTGGTTGAAAGTTGAAGCAGACTAGCCAACAAACAAATCT
GCATGAACATAGCC---CAACTGACAATGACAATGCCACGGGCCGAGCAAG-----------------------------
------------------------GCAGACATGGCACACGTGAGTCACGAGATTGTGTTTCTAGTAGCGTACACCGGCAG
ATCG--------------------------TGGATGTACCACCACCACACACGGAGAT----AATCTAAAGAAACAGATG
TTGTTTTCA---GCATCGGCATCAGCAGCAGCAGACGGGTTTGACAATGAGGTTTGAGAGTGCACTTGTTAGGGTAAACT
ATGCATAACGCACTCTTGCCCATGCCGGCTTGAGAATTTTTTACCTCTTCAGACTTCGGCAGCAGACGT-----------
------------------------------AAAATGAAATGGTAGGCACAGTTTTTGGTGCTTTTTTTGTTAG-------
TTGGATTTGTAGCGCGCTTGTGGTAAAACCATGCATTTCTTACCATCTTGGTTCAGAATGTTTTACATGTTCAGAGTCCA
GAGTGTCAACATCAGCAGTAGATGAGTTTGATAGTGAGGTTTCAGTTCAGAGCAAACTTGTGTTG------------CTT
GCCATCTTGGCT------AAGAAAAATTTACCTGCTCAG-GTTCAGAGTGATTGTGCTGGTCACATGACGCAAC------
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---------------------------------------------------------------------------CCCAG
ATCTCCAGATTTTCAGTCCATTTTGTCCCTACCTAACCTGCTAAATTGGAAGCAGGACAAATTTGCATGTTTTATATC--
--------------------------TAGTATTTAAATTCGCAGTATCTTAAATCCACATGCATATTTCTTAA-------
--TAACAACGGTGGCACCTGCAAATT-AAAATGCAGGAGTAAAGCATGTTGGTGGAGACATGTTCAAATCCATCCCCTCC
GGCGACGCCATCTTCATGAAGGTGTGT----ATCACGCTGTGAAGTCCCTGAAATTCAGACACC-CGGGTCACAACATTG
CCGAAACCAAACAAGATTTGATCTGATTCTCATCTTGTTT-CCTTCCTCCAGTGGGTTCTCACGACGTGGACCAACGACG
AGTGCACGGCGATCCTCAAGAAATGCCACGAGGCGCTGCCGGAGGGCGGGAAGCTCATCGCGTGCGAGCCGGTGGTGCCG
GAGACGACGGACGCCAGCACGAGGACGAGGGCGCTGCTGGAGAACGACATCTTCGTCATGACCACCTACCGGACCCAGGG
GAGGGAGCGGTCCGAGGAGGAGTTCCGGCAGCTCGGCCTCACCGCCGGCTTCGCCGGCTTCCGGGCCCTCTACCTCGACC
CTTTCTACGCTGTCCTTGAGTATGTCAAGTGACCTGCGACTTAGATCACCTCTTCACGGAAGCA------TTTCTCCTGT
GTGACAGC---TGACCAAGAAGGTCAGATGAATGACGCCCAAGTTGCTGTTGGGTTGGACAATGGACATGCGTTTTGAGT
TCTGCAACAAGATCATCTCTTCAAATCATTCTAAGTGCACCCATACAGTTTGCGAGTGATAACATAGCACCATCAGTACA
ACGTACAGTGAGGGCACACAGATAACAGAGGGAATACATGCACACATAAACTATATTAAAAGGGAGCTGTGGAGTATACA
TTCTTTACAACAATTATTCTTAGATCGACCATCTATTGGCAAGTTGCCTAAATATTCTTTGGTGTCAGTCATTTTTTCTT
AATAAAAGATAACAAAAACAAGTAAAGACACAACCATAAACTAAAATAAAAACGTATGTTATCCTAAGATTGAATGAACT
AAGGGCATTACTTCCAATTAGAAAAA---------------GAATTAAAGGCATTGGTATTAACCTAAAATAAAAT-AAA
AAAGAACCAAGCAAACTTAATACAAATGATGACAAAAAGTTACACACAAATTGTATACAACTTGCATTGTG---------
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---------------------------------------------------------------------------TAACT
TTCATTTTTCTTTAAATCACATGTAAATGTATCCA-AGCTCAACAATGATTACAGGTACTATATTTTGGATCGTAGGCCC
AAGAAATTGCAGAATAACTCGTATGACTGAAAATTACAACAAAATCTCTCAAAGACTTATTTTCCATGGTAACAAGCTTT
GCAATATGAAATACTACCGAGACTTCAATGAAGCCATAGCAATCCAATCGTATTAACATCGCAACCAACCATATACCTGT
ACAAAGTTGACTACCTTCAAAGGTTCTCGAAAGCCACATGAGTCGCCCATCCAAAAAGATG
>chr6D_504
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---------------------------------------------------ATTAAACTAACCATCTCACCAGATAACGA
AGCCATCTCGAAAGCAACCACTATAAAATACTATCGCCGTATCCCCTCAAAATCTGAAAACAAATCATT----TTGGTGA
ACCGATCCGATTTGATGGCCACATGAGGTGACGTGCCGCCCCGCGGTCATCCCTCCA-----------------------
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------------------------------ACTCGCACTCTCTACACCCGTACCCCTTTCCCTCTCCACGCTGCC-TGCG
GCCCCGCGGTTAAGTTGGTCCCACGTGTCATTCCTTGG-AGGGACTATCCTGTGGTACGGGCGGCATCGTGTGCCTACAT
AGCCGATAGATGTGGCGCCGCAGGGATGGGCCGGACTCGCTCACTCCCACCACTCCACCTCATCGAAAATGTCGTCGACG
CCGACCCAGCCGCCGGCAGCCGAGCCCGCCACCGCCACCGGTGCGGAGATGTCGCCGCCGGAGGCGCGGCTGGCGATGAT
GGAGCTGGCGAACATGATAGCCGTCCCGATGGCGCTGACGGCCGTCATCCGGCTGGGCGTGCCGGCCGCGGTGTGGGCGG
GCGGCGCCAACGCGCCGCTCTCGGCCGCGGAGCTGCTCCCGCCGGGCCACCCGGACCCGTCCGTCCTCGAGCGGCTCCTC
CGCCTGCTCGCCTCCCGCGGCGTCTTCTCCGAGCACGCAGCCGACGGCC------GCCCGGAGCGCCGGTATGCGCTGAC
CGCCGTGGGGCGCACCCTGGTGCCCTCGGGCGCCTCCGGCGCGTCGTACGCCGACTACGTGCTGCAGCACCACCAGGACG
CGCTGGTGCTGGCGTGGCCGCGGCTGCACGAGGCCGTGCTGGACCCCGCCGGCCCGGAGCCCTTCGCGCGCGCCCACGCC
GGCGTCCCCGCCTACGCCTACTACGGCCAGGACCGGGAGGCCAACGAGGTGATGCTCCGCGCCATGACCGGCGTGTCGGA
GCCGTTCATGGAGGCGCTGCTGGACGGGTACGAGGGCGGGTTCGAGGGCGTGGCCACGCTGGTCGACGTCGGCGGCAGCT
CCGGCGCCTGCCTGGAGATGATCATGCGCCGGGTGCCCACCATCCGCGAGGGCGTCAACTTCGACCTGCCCGACGTCGTC
GCCGCCGCGCCCCCCATCGCCGGTGAGACCCTCAATCGATCCCCCAA---TCCCCTCTACCTACTACCCTGCCTACCTCA
TACGGATTGGTCGTAAGATATATTCCTATCAT--GATCCAGTGGTTGAAAGCTGAAACAGATTAACTAACAAACAAATCT
GCACGAGCACAGCACCACAACTGACAGTGACAATGTCACGAGCGATCGGTCGATCCATCACTCCAAGAAGAATACCGGCC
GACCAA-----------------AGCAGACATGGCACACGCGAGTCACGTGATAGTGTTTCTAG---CGTACACCAGCAT
GCAGATCGGGACACGATCGAGGTGCACCCATGGATCCATCACCACCACACACAGAGAGCATAAATCTAAAGAAACAGATG
TTGTTTTCGGCGGCATCGGCATCGGCATCGGCAGACGGGTTTGATAATGAGGTTTCGAAGCGCACTGATTAGGGTAAACT
ATGCATAATGCACTCCTGCCCATGATAGTGACGTTGGTTTCAGAGTA---------------CAGATGTGCTGGATTTTT
-----------------ACCTAACCTGCTAAAAATGAAATGGTAGGCACGGTTTTTGTTGCTTTTTTTTTTTGTTA----
-TGGATTTGTAGCGCGCTTGTGGTAAA-CCATGCATTTCTTACCATCTTGGTTCAGAATGTTTTACATGTTCAGAGTCCA
GAGTGTCAACATCAGCAGTAGATGAGTTTGATAGTGAGGTTTCAGTTGAGAGCACACTTGTGTTG------------CTT
GCCATCTTGGCTTCAGAAAAAAAAATTGTACCTGTTCAGCGTTCAGATTGATTGTGCTGGTCGCATGAAGCAATCCCAGA
TGAGGTAAATACACCGGGAGTCTTCAAACTTGCACGCGACGGTCAGTTTGATGCACAAACTTATAAAATACGTGATTCTA
GTCATCGAACTTGTGCGGACGTGCAAATACGGTCACATATCCCGTACATGGGCGTATCCGATGCTTGGCTGCCTGCTGTC
AGCAACAGATGGCGCTCAGCGCGGCGTGTTTTTGCACAAAACCCCATAGCCTTTTTTATTTGTGAAAAAATAACAACTGG
TGGGTCCCACTTATCAGTATATAGCGAAATTTAAATACGAAAAAGTGTGTCGCCCAGTCTAGAACACACGCCTAAGGCGA
GGACACAATCCGGCCAAGCCACTCCAACCCAATCCTGTGGATGTTTACGTAGGATAACTTTGCTTTACTGTACTATAACG
AAGGAGCTCGTGTAGCAGAAATGGGTTCCATTTTGTGCGGCCTATTTTGCATCTGCTCTCCTTTTTTTTACAGATTAATA
GATATGTAGTATGTAAATTATAATCTCAATAATAAAATGACTTTCAAATATTGTTCATGTATTATTTTAAAATAATATTT
ACGAATTGTAAAAGATATTTGCATAACTATAATACAAATATTTTTTTAAATATTCATAATTGTAAAAACATCGTTTTCAA
AATTTGTAGAATAATTTTAAAAATAAAAATTAATAATTTTAAAAATGGTAATAATTAAAAAATGTATGTATAGTTGCACC
TGTTCGTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTCTGTATAATTTAAATATAAGCCACGAGTGTACAATTCT
TTTTGTATTCATTATTTTTTTATTTAATAACATTTTAAATGTCTGTATTAAATAAATATATTTTATGTAATACACAAGTT
TATATTTCATAAACTGTTGACTCTACATTTTACTTGTAGTAAGTCACGTCATGTGCACGACACATATTTAGTTGATAATC
CCGGACGTTTTCAGTATAAGTGAAATTATATCTCATGTTAGACATGTAAATGTTCCTGTTGCAATGGTTGGGTCTTTCTT
GTGCCTACCTGAGCTAGCTAGATCGAAGACCCACCACCCGCGCTTCTGTACCAATGATGATTTTTTTCTGCAAATAAACA
AAGGCGAGGCTGTTTTACGCAAGAACATGTCGCACTGAGTGCCATCTTGTCATTGACAGTGGGCCTTGCACACTCTGGCC
TGCCAAGCAAGCATCGGATACGTCCTCGTACGGGATATGTGACCGTATTTGCACGCTCGCGCAAGTTCGATAACCAAAAT
CACATATTTTAGAAGTTTGTGCACTAAACTGACCGTCGCGTGCAAGTTCTAAGACTCCCAGTGTATTTACCTCATCCCAG
ATCTCCAGATTTCCAGTCCATTTTGTCCCTACCTAACCTGCTAAATTGGTAGCAGGACACATTTGCATGGCTTCTACTCA
TCTTATATCGTGTGGGACGGAAGGAGTAGTATTTAAATTTGCAGTATCAAG-----ACATACACATTTCTTAATACAGTA
CTTAACAATGGTGACACCTGCAAATTCAAAATGCAGGAGTGAAGCATGTGGGTGGAGACATGTTCAAGTCCATCCCCTCG
GGCGACGCCATCTTCATGAAGGTGTGCATTGGCCTC------AAGTCCATGAAATTCAGACACA-CCGGTCACAT-ATTA
CCAAAATCAAACAAGATTTGATCTGGGGCACATTTTGTTTTCCTTCCACCAGTGGGTACTGACGACGTGGACCAACGACG
AGTGCACGGCGATCCTCAAGAAATGCCACGAGGCGCTGCCGAAGGGCGGGAAGCTGATTGCGTGCGAGCCGGTGGTGCCG
GAGACGACGGACGCCAGCACGAGGACGAGGGCGCTGCTGGAGAACGACATCTTCGTCATGACCACCTACCGGACCCAGGG
GAGGGAGCGGTCGGAGGAGGAGTTCCGGCAGCTCGGCCTCACCGCCGGCTTCGCCGGCTTCCGGGCCCTCTACCTCGACC
CTTTCTACGCCGTCCTTGAGTATGTCAAGTGATCAGGTGGC--TTAGATCTCACCTCTCCACCCAATTGTTTTCTCCCAT
GTAACAGAAATTGAACAAGGAGGTCGGGTGTATGACGCCCTGTTAGGT--------------TGGACATGCATTTCGAGT
TCTG----------------------------------------------------------------------------
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>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
-------------------------------------S--------SSS--SS---------------------------
-------------------------------------S---------S------S------S------------------
-------------------------------------------------------SS-S-SS---S----S------S--
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------------S------S---S----------------------
--------------------------------------------SS------------S------------S--------
------------------------------------------------------------------S----------S-S
-SS------------------------------S------SS--------------------------------------
----------------------------------------------------S---------------------------
--------------------------------------------------------------------------------
--------S--S--------------------------S------SS-SSSSSSS-------------------------
---------------------------S---S----------S-------------------------------------
----------------------S--S--------------------------S---------------------------
--------------------------S----------S------------------------------------------
---S------S---------------------------------------------------------------------
----------------------------------------------S---------------------------------
---------------------------------S----------SSSSSS-----------------------S------
---S-S----S--S-SSS--------------------------------------------------------------
-------------------------S---------S-----------------SSS---SS--SS-SS-SSSSSS-SS-S
-S--SSSSSSSSSSSSSSSSSSS-------------------------------------S-S-----------------
----------------------------------------S---------------------------------------
---------S----S---S------S------------------------------S-----------------------
------S--------S----------------------------------------------------------S-----
SSSSSSSSSSSSSSSSS-------S----S-S----------------S------------S-------S--SS-SSSSS
---------------S---------S-SSSSSSS--S------S-------S-SSSS-S-------S-----S----S--
-----------------------------------------SSS--------SS-----S--S-SSSSSSSSSSSSS---
-----S---------------SSS-SS-----------SS------SS------S-------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------S---
S-----------------------------S--------------S----------------------------------
----------------------------------------S-----------------------------S---------
--------------------------------------------------------------------------------
---------------------------S-SS---------------------------------S---------------
---------------------------S-------------SS-S---------------------S-------------
----------------------S---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------S--------S-----------------S-S-------------------------------------------
----S----S--------------------------S-------------------------------------------
----SS--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------S-S----S--S----SS
---S-----SS-SSS--S-S------SSSSSSSSSSSSSSS-------S------S------S------S-----SS---
-------S---S------S-SS------S-------------------S----S-----------------SSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----
-S--------------------S---S--------S-----S----SS-----SS--S--------------S---S---
-----------S-S--------------S----------------------------------------S--------SS
--------------S-------S-----S---------------SS---------S-SS-S-S-------------S--S
----------------------------------SS-----SS------------------
>forward_382
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------CAACAAACCAGGACGGGGTA------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------
>reverse_2321
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
GGGCAGTTCTTGTCCCTACC------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>forward_1851
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------CCCACCTCA
TACAGCTTGCA---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_6052
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--------------------------------------------------------------------------------
---------------------------------------------------TTTCCGAACGTTACGCTGGA---------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------
