>input_sequence_38237
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-------------------------------ATGGAGAGGACCGGTTCCAGCGCTGACGGCACGGGTCCTAGCACCTCCT
CCTCCTACCCCACCGCCGACGCCGACGACAATGGCACCGCCGGCGGCGCCAAGGTCTGGCTCCTCGTGCTCCTCTTCTCC
CTGCTCCTGCTGCTCTTCCTCCCCTCCGCCGTGCGCCGAG---GCGGCGGATTCCAGCGCGGAGGGATTACGCTCAAGAG
CGGCGGGGACGTCGTCAACCTCTGCCTCGTGCTCTTCGCCATCCTCTGCGGCCTCCTCGGCCGCGGCGGGGGCGACGCCG
ATGGGGAGGCCCCTGGCCCCGCGCCGCTGGCGCCCAAGAGCCATCTGCGGGTGTCCCCTGCCGCGGCGC---CGACGCCG
GAGCCGAGCACCGAGGACGTCTGGGCGAGCTTCAACAACTCCTACACCAACCACAACGCCCAGACGGGGATCCGGCGGAT
GAAGAGCAGCAGCTCCTACCCGGAGCTGCGGCTGGACAGCGACGGCGTCTGGGGCCTCGCGTCACCGGAGTTGGCCTGGC
GCTCCTACGACGATGCCGAGCTGTACCGGACCCGCCGAGAC---------------------GACGCCGATCGGCCGCTC
AGGAGGACGTCGTCCGATGTGAAGACGATCCCGGTGGACACCTACGAGGTGCGCGCCAGACCGCTGCCTCAGGATGCGAG
GAGGCGGAGGCGGAGCGTCGAGAGGCTCCCCAAGATGGATGAGGTGGAGGAGGAGAGGACGCATCCGGCGGAGACGGAGA
CTCTCGCTACGCCGGCGAGGAGCAGGACCTGGAGCCCGGAGGAGCTGGACGCTACGCTGCTGGGGATGGCGTCCGCACCA
CCAGCACCTGCCCCGCAGCCGCAGCCTCGCCGTCGCCGACGCAGCCTCGAGAGGCTCCCCGAGATGGTTGAGGTGGAGGA
GGAGAGGACGCGTCCCACGGAGACTCGCGCTACGCCGGCGAGGAGCAGGACGTGGAGCCCGGAAGAGCTGGGCGCTACGC
TATTGGAGATGGCGTCCGCAGAACCACCACCTGCCCCTCCGCAGCAGCCTCGCCGTCGCCGCCGCAGCCTCGAGAACCTG
CCGACAATGGAAGAAGTGGAGAAGGAGATTATAGTGGAAGAGATCAATCACCCGCAGTCGCCATCGCCAGCCATGTTTCC
CCCAGGGACTCCGCCGCCACCTCCTCCTCCGCCACCGGCGGCAATGTCGAGGAGCAAGAAGAAGAGGAGCGGCAGTGTGG
GCGGCGCAAAGGAACTGGCCTCCGCCATTGCTCTCTTCTACCAGAAGAAGCGCAAGAGCATTATCATGAAGAGGGAGAGG
CACCACCACCACCACCATCACCATCTCTCCGATGACCACTACTCGTCGCCTTCGTCCGAAGCATCGGCGAGTCCCGAAGC
TACCGGCCGTGCCAATCCTCCACGCCCGCCACCGCCGCCACCCCCTCCCCCGCCGCCGCCGTCATCCATCTTCTCCAACC
TCTTCAAGAAAGGAGGCAGCAAGAGCCGCCGCATGAACTCCCTCGCGCCACCGCAACCGCCACCTCCGCCCCCACCAACG
CGCCGATCAAGGAAACCGCCACAGCCTCCGTCTCGCCCCGCTCCTCCGCAGCCAGCGCCAGCTCCGGTGAGGACACGGCC
GCCGCGCGCGAGCGCGCACCCGCAACAGCAGATACGCGCGCAGGGGTATCCGCAGCAGCCGCCACTGTATCCCAGGCGCG
GTGTCGTGTACTACGCCTACCCGCTTCCTCCGCCGTCGCCCCCAATGCCGCCACCGCCTCCTCCACCGCCGATGCTGGAG
GGGGAGGAGGAGGTTCCGTCGGTCACTGCGTCACCGGCACCGTCGTACTGCGCGAGCCCCGACGTGAACACCAAGGCGGA
CAACTTCATCGAACGCTTCCGCGCCGGGCTGAAGCTGGAGAAGATCAACTCGTACAGGGAGAAGCTGCAGATCCAAGAAG
GCGCGACCGTGACCATGGCGGAGGAGGACGGGGAGTTCATGGTCATTGGGTCCCTCTTCGAAGATGATGATGACGATATG
TCGTTGCCGGAGACGCCGGTAACCGCCACCGCG------GCCGCTGTTGCCGCCGGCTTGTAA-----------------
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>chr3B_1_TraesCS3B01G239800
TGTTGC--TTAGTTGTGGATTGCAAGGCTAAATTTGCATGGGTTTTTTCTGTTGGCCTCAACTTAACTTTGAGGTTGAGG
GTGAGAAGAGAAGAAAACCCTGGCTGGGCTGGCATCAGTTGCTGAATGGGAGCATTTCCGGAAGAAAACCCGACACGCGA
CGCGCCGGGACGTTACAACTTAAAAGCTTGGATTGTTGCAACAGCTAGCGCACACATACATTGCTTGCTTCAGGCTTCAG
CTCACAACAACCAGCACGCCACAGCGGGGAAACAAATCAATTTCTTTTTTCTTTTCTCTTTTGTTTAATTTTTTTCA---
AAAAGTCCATTTCGTAAAACGAAAGAGCAGAGCAGACAATATACTCCGACGGTAGAGACCGTGCATTGTACTGCTGTCTA
CTGGTGAGATCCATCGATTTTCTAGTTGTAGTACATTCCAC-CAGTCAGTTTGGCACAGACTAAT---TAATCAAACACT
GGGATGCAACTACTA------CACTTAGTAGTGTAGTACTTGGCACCGAAGGAAGGTTCCTGGACACACCGAATTTTAAG
CGCGT---AATTCCTACTAGTACTCCTCCTACTGGC--------TACCAGTAGTGCTGTGCTGGATGGATTAAGAAAAGA
TTAACGTTCACTAGTCCAGCGCATTACACTAGTAGTAGTATAGACTCAGAAGCCCAACAATCATTCATTCATTCCCCGTT
TTCTTCAACCAAAATCATTTTGATTCCGTGCCGCATAATAAAACCGGACAAACAACTTAAGCATGTACCACTCCCCTCAC
CTCAGACCTCACCTCACCTCACGTATATAACCAGCCAACAAGAAAGCAGACGCAGACAGAGAGGAGGCCAGCAGATTAGC
GAA------------------------------AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATACAAAAAGCTCCA
CACACGAACCATTTTGCTGCTGCTC---------------CTTTGGCCTTTCTGCGCTTTTGGATTTCGCATCTCAACCG
TGCGACGACGCGAGGAATCAACACGGGCGCCATGGAGAGGACCGGTTCCAGCGCTGACGGCACGGGTCCTAGCACCTCCT
CCTCCTACCCCACCGCCGACGCCGACGACAATGGCACCGCCGGCGGCGCCAAGGTCTGGCTCCTCGTGCTCCTCTTCTCC
CTGCTCCTGCTGCTCTTCCTCCCCTCCGCCGTGCGCCGAG---GCGGCGGATTCCAGCGCGGAGGGATTACGCTCAAGAG
CGGCGGGGACGTCGTCAACCTCTGCCTCGTGCTCTTCGCCATCCTCTGCGGCCTCCTCGGCCGCGGCGGGGGCGACGCCG
ATGGGGAGGCCCCTGGCCCCGCGCCGCTGGCGCCCAAGAGCCATCTGCGGGTGTCCCCTGCCGCGGCGC---CGACGCCG
GAGCCGAGCACCGAGGACGTCTGGGCGAGCTTCAACAACTCCTACACCAACCACAACGCCCAGACGGGGATCCGGCGGAT
GAAGAGCAGCAGCTCCTACCCGGAGCTGCGGCTGGACAGCGACGGCGTCTGGGGCCTCGCGTCACCGGAGTTGGCCTGGC
GCTCCTACGACGATGCCGAGCTGTACCGGACCCGCCGAGAC---------------------GACGCCGATCGGCCGCTC
AGGAGGACGTCGTCCGATGTGAAGACGATCCCGGTGGACACCTACGAGGTGCGCGCCAGACCGCTGCCTCAGGATGCGAG
GAGGCGGAGGCGGAGCGTCGAGAGGCTCCCCAAGATGGATGAGGTGGAGGAGGAGAGGACGCATCCGGCGGAGACGGAGA
CTCTCGCTACGCCGGCGAGGAGCAGGACCTGGAGCCCGGAGGAGCTGGACGCTACGCTGCTGGGGATGGCGTCCGCACCA
CCAGCACCTGCCCCGCAGCCGCAGCCTCGCCGTCGCCGACGCAGCCTCGAGAGGCTCCCCGAGATGGTTGAGGTGGAGGA
GGAGAGGACGCGTCCCACGGAGACTCGCGCTACGCCGGCGAGGAGCAGGACGTGGAGCCCGGAAGAGCTGGGCGCTACGC
TATTGGAGATGGCGTCCGCAGAACCACCACCTGCCCCTCCGCAGCAGCCTCGCCGTCGCCGCCGCAGCCTCGAGAACCTG
CCGACAATGGAAGAAGTGGAGAAGGAGATTATAGTGGAAGAGATCAATCACCCGCAGTCGCCATCGCCAGCCATGTTTCC
CCCAGGGACTCCGCCGCCACCTCCTCCTCCGCCACCGGCGGCAATGTCGAGGAGCAAGAAGAAGAGGAGCGGCAGTGTGG
GCGGCGCAAAGGAACTGGCCTCCGCCATTGCTCTCTTCTACCAGAAGAAGCGCAAGAGCATTATCATGAAGAGGGAGAGG
CACCACCACCACCACCATCACCATCTCTCCGATGACCACTACTCGTCGCCTTCGTCCGAAGCATCGGCGAGTCCCGAAGC
TACCGGCCGTGCCAATCCTCCACGCCCGCCACCGCCGCCACCCCCTCCCCCGCCGCCGCCGTCATCCATCTTCTCCAACC
TCTTCAAGAAAGGAGGCAGCAAGAGCCGCCGCATGAACTCCCTCGCGCCACCGCAACCGCCACCTCCGCCCCCACCAACG
CGCCGATCAAGGAAACCGCCACAGCCTCCGTCTCGCCCCGCTCCTCCGCAGCCAGCGCCAGCTCCGGTGAGGACACGGCC
GCCGCGCGCGAGCGCGCACCCGCAACAGCAGATACGCGCGCAGGGGTATCCGCAGCAGCCGCCACTGTATCCCAGGCGCG
GTGTCGTGTACTACGCCTACCCGCTTCCTCCGCCGTCGCCCCCAATGCCGCCACCGCCTCCTCCACCGCCGATGCTGGAG
GGGGAGGAGGAGGTTCCGTCGGTCACTGCGTCACCGGCACCGTCGTACTGCGCGAGCCCCGACGTGAACACCAAGGCGGA
CAACTTCATCGAACGCTTCCGCGCCGGGCTGAAGCTGGAGAAGATCAACTCGTACAGGGAGAAGCTGCAGATCCAAGAAG
GCGCGACCGTGACCATGGCGGAGGAGGACGGGGAGTTCATGGTCATTGGGTCCCTCTTCGAAGATGATGATGACGATATG
TCGTTGCCGGAGACGCCGGTAACCGCCACCGCG------GCCGCTGTTGCCGCCGGCTTGTAAATTCGAATTCTACTTCT
GACTTCCGAGGTGTTGCATTGACGCTTGGAAACAACAGAGAGAAAAGCGAATATTTTTTTTTTCAAAACAAACAAAATGA
AAAGGGAATTTATTTTGGGTATTGGGTTATTTGAGGTATTTTCCATGAGATTTGGTTCACTTTTCTTCTCAATTTTTTGG
GTAGTTTAGGATAATTGACAGTGAGATTGGGTTATTGATTGCTTGTGGAGAGGATGA-----------------------
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-----------------------------------------------------------------------------ATT
CAGTGTTGAGGTTATTACTCTAATTGAAGAGAGTGGTATAGGGAGCTTTATGCGCATGTTTTAAAATGGCCAGAAAGCTC
GGCGAGGTGATACAAATTTCATGTGTCTACAGTCTATATACTAGTAGTACTACTTAACATGGCCAGAAAGCTCGGCGAGG
AGTATAGTCGTAGAAAGTGAAAGATCTTTACAGTTTATTTATTTTGAATCATCATGTTGTACGTGCAATAATACTACACC
TTGTGTACGGTGATCGTGGATGATTTGCCTATGCTGATATACCACGTACGTACTCATACGTG-CGTTTTTGTAGTGTTGC
ATGAGCTGTCGAGCTTAATGATTTCTGTGTTTGGATATTGGTGCGGTTTGGGGGTATGATTTGCTTTGATTGTGCCCAGT
TGTGCTTATCATATTTTGGGCCTCGCGTGGTTGGGCACCATCCATCCACACAACCAAACGTTGCATGCATCACCAACCTC
AAATCAAAATAGAAAACGCATGCAAATACTCCCTTCCTCCCATAATATAACACGTTTTTGACACTAGTCTATATCTATAT
CTATATCTATTATCTATATCTAATAATAAAGTAATGTGTGTTTCGTCAATTTTTCCATCTGTTCATCGTCGAAAAGAATT
TTTTCCTACGCGAGGTGGTACTAAGTTCTTATGTGTTTGTCTGCTAGAAAAAGAATTTCCGTACGTAGGCCGCGCGCTTT
GGCCAATCGAAACCAGCCCACTTATTTTTCTGCCCATGCAGTTA
>chr3D_1
TGTTGC--TTAGTTGTGGATTGGAAGGCTAAATTTCCTTGGGTTTTTTCTGTTGGCCTCAACTTAACTTTGAGG------
GTGAGAAGAGAAGAAAACCCTGGCTGGGCTGGCATCAGTTGCTGAATGGGAGCATTTCCGGAAGAAAACCCGACACGCGA
CGCGCCGGGACGTTACAACTTAAAAGCTTGGATTGTTGCAACAGCTAGCGCACACATACATTGCTTGCTTCAGGCTTCAG
CTCACAACAACCAGCACGCCACAGCGGGGAAACAAATCAATTTCTTTTTTCTTTTCTCTTTTGTATAATTTTTTTTA---
AA--GTCCATTTCGTAAAACGAAAGAGCAGAGCAGACAATATACTCCGACGGCATAGACCGTGCATTGTACTGCTGTCTA
CTGGTGAGATCCATCGATTTTCTAGTTGTAGTACATTCCAC-CAGTCAGTTTGGCACAGACTAAT---TAATCAAACACT
GGGATGCAACTACTA------CACTAGTCCTGGT-GTACTTGGAACCGAAGGAAGGTTCCTGGACACACCGAATTTTAAG
CGCGT---AATTCCTACTAGTACTCCT---ACTGGC--------TACCAGTAGTGCTGTGCTGGATGGATTAAGAAAAGA
TTAACGTTCACTAGCCCAACGCATTACACTAGTA------TAGACTCAGAAGCCCAACAATCATTCATTCATTCCCCGTT
TTCTTCAACCAAAATCATTTCGATTCCGTGCCGCATAATATAACCGGACAAACAACTTAAGCGTGTATCACTCCCCTCAC
CTC--ACCTCACCTCACCTCACGTATATAACCAGCCAACAAGAAAGCAGACGCAGACAGAGAGGAGGCCAGCAGATTAGC
GAA------------------------------AG----------------------AGAGAGAGATCCAAAAAGCTCCA
CACACGAACCATTTTGCTGCTGCTGCCTGCT-----GCCGCTTTGGCCTTTCTGCGCTTTTGGCTTTCGCATCTCAACCG
TGCGACGACGCGAGGAATCAACACGGGCGCCATGGAGAGGACCGGTTCCAGCGCTGACGGCACGGGTCCTAGCACCTCCT
CCTCCTACTCCACCGCCGACGCCGACGACAATGGCACCGCCGGCGGCGCCAAGGTCTGGCTCCTCGTGCTCCTCTTCTCC
CTGCTCCTGCTGCTCTTCCTCCCCTCCGCGGTGCGCCGAGGCGGCGGCGGATTCCAGCGCGGAGGGATTACGCTCAAGAG
CGGCTGGGACGTTGTCAACCTCTGCCTCGTGCTCTTCGCCATCCTCTGCGGCCTGCTCGGCCGCGGTGGGGGCGACGGCG
ATGGGGAGCCCCCCGGCCCCGCGGCGCCGGCGCCCAAGAGCCATCTGCGGGTGTCCCCTGCGGCGGC---GGCGACGCCG
GAGCCGAGCACGGAGGACGTCTGGGCGAGCTTCAACAACTCCTACACCAACCACAACGCCCAGACGGGGATCCGGCGGAT
GAAGAGCAGCAGCTCCTACCCGGAGCTGCGGCTGGACAGCGACGGCGTCTGGGGCCTCGCGTCACCGGAGTTGGCCTGGC
GCTCGTACGACGACGCCGAGCTGTACCGGACACGGCGAGACGAGCGGCCCGACAGGGCCCGGGACGCCGATCGGTCGCTC
AGGAGGACGTCGTCGGATGTGAAGACGATCCCGGTGGACACCTACGAGGTGCGCACCAGACCGCTGCCTCAGGATGCGAG
GAGGCGGAGGCGGAGTGTCGAGAGGCTCCCCAAGATGGATGAGGTGGAGGAGGAGAGGACGCATCCGGCGGAGACGGAGA
CTCTCGCTACGCCGGCGAGGAGCAGGACCTGGAGCCCGGAGGAGCTGGACGCTACGCTGCTGGGGATGGCGTCCGCACCA
CCGGCACCTGCCCCACCGCCGCAGCCTCGCCGTCGCCGACGCAGCCTCGAGAGGCTCCCCGAGATGGTTGAGGTGGAGGA
GAAGAGGACGCGTCCCACGGAGACTCGCGCTACGCCGGCGAGGAGCAGGACGTGGAGCCCGGAGGAGCTGGGCGCTACGC
TATTGGAGATGGCGTCCGCAGAACCACCACCTGCCCCGCCGCAGCAGCCTCGCCGTCGCCGCCGCAGCCTCGAGAACCTG
CCGACAATGGAAGAAGTGGAGAAGGAGATTACAGTGGAAGAGATCAATCACCCGCAGTCGCCATCGCCAGCCATGTTTCC
CCCAGGGACTCCGCCGCCACCACCTCCTCCGCCACCGGCGGCAATGTCGAGGAGCAAGAAGAAGAGGAGCGGCAGCGTGG
GCGGCGCAAAGGAACTGGCCTCCGCCATTGCTCTCTTCTACCAGAAGAAGCGCAAGAGCATTATCATGAAGAGGGAGAGG
CACCACCACCACCACCACCACCATCTCTCCGATGACCACTACTCGTCGCCTTCGTCCGAAGCATCGGCGAGCCCCGAAGC
TACCGGCCGTGCCAATCCTCCACGCCCGCCACCGCCGCCACCCCCTCCCCCGCCGCCGCCGTCATCCATCTTCTCCAACC
TCTTCAAGAAAGGAGGCAGCAAGAGCCGCCGCATGAACTCCCTCGCGCCACCGCAACCGCCACCTCCGCCCCCACCAACG
CGCCGATCAAGGAAACCGCCACAGCCTCCGTCTCGCCCCGCTCCTCCGCAGCCAGCGCCAGCTCCAGTGAGGACACGGCC
GCCGCGCGCGAGCGCGCACCCGCAACAGCAGATACGCGCGCAGGGGTATCCGCAGCAGCCGCCACTGTATCCCAGGCGCG
GTGTCGTGTACTACGCCTACCCGCTTCCTCCGCCGTCGCCCCCAATGCCGCCACCGCCTCCTCCACCGCCGATGCTGGAG
GGGGAGGAGGAGGTTCCGTCGGTCACTGCGTCACCGGCACCGTCGTACTGCGCGAGCCCCGACGTGAACACCAAGGCGGA
CAACTTCATCGAACGCTTCCGCGCCGGGCTGAAGCTGGAGAAGATCAACTCGTACCGGGAGAAGCTGCAGATCCAAGAAG
GCTCGACCGTGACCATGGCGGAGGAGGACGGGGAGTTCATGATCATTGGGTCCCTCTTCGAAGATGACGATGACGATATG
TCGTTGCCGGAGACGCCGGCAACCGCTAC------CGCAGCCGCTGTTGCCGTCGGCTTCTAAATTCGAATTCTACTTCT
GACTTCCGAGGTGTTGCATTGACGCTTGGAAAAAACAGAGAGAAAAGCGAATAA-TTTTTTTTCAAAACAAACAAAATGA
AAAGGGAATTTATTTTCGGTATTGGGTTATTTGAGGTATTTTCCATGAGATTTGGTTCACTTTTCTTCTCAAATTTTTGG
GTAGTTTAGGATAATTGACAGTGAGATTGGGTTATTGATTGCTTGTGGAGAGGATGATTTTTTTTTCGAGGGTACACAAA
TTGCGTACCATAACTTTATAGAAGGAGAGAAAATTAGTATATGACCCCTACCACTTGCTGCGAACAACGAGCGTAGCACA
ACAACACATCCGGCTATCCTCAGGACAGCCACACACGACATCACAACTACAACACGGATAACCTGCCCAAAACCGAAACA
CCTCGCCGCGTCTTGATCGATACCGAACACCTTCGAAGAATAGCAACTCCAGCTTCCTTTGGGTTCATCCGTGACGACCA
TATATAGCGCCGGAGGAGAGCGGTCAGGGCCACGACGAACACCGGAGGAGCGCCAACAAGAAGCTCAGTCTCCTTGCATG
ATGCTCCCAACAGAGAAACGACGTCGTAGACGCCGCCAACATGCCGCTCCAGAGGACCAAGGCTTTCGCCCGGAGACAAC
TGCCAACACCAATCACGAGGGAGATGGCGACACACTCGACATCGCCTCCAGAGAGGGGAACGACATCCGCGGGTGCCATC
GATGCCGGCCGGCCAAAAACCGGATAGGATTTTCATCCGTGACGTTGCGCATCTCCACTCCGACGAGGTAGGCAGCACCG
TTCCTGAAGCCTCGCATCGCCGTCACCGCAGCAAATTCGTCAAAGCCGCAAAGCCGAGGTCCCACACCACCCGCACTGCC
GAGAGAGCGTGAACCAGACCTCCACCAACATCGCATCGAGGAGCAACCACAACCTCCAAGCAGAGCAAAAGCCAGATCCG
CTCCAACGGCCGTCGTCGACACCAAGAGACTGCCGCCAGATTGGATCTAGCCCGCCCCTCCAACCTCACTCCGGCGCCAA
CTCCACCGGGGCATCGCCGCGATCCCTCACACGGAGGCGGCCGGACGCCCGCTGCACGCCAAGACACCTTCCTGGCAGGG
CCATCTCGGCGCCGCCGCCCCCATGGCTGATCCAACGCCGCCGCCACCGCCGATGCTGGCGCTCGACCTGCAGCCACCAA
CCAGAAGTGCTCCTCGCCAGGATCCGAAGAAAGCCCTCGCCTTTGCCCCCGCTGTGCCTCCAACCCAACCGCGAGCCCCA
GCGCCGCCCGCGAGAAGAACGCTGCGCAAGACCACGCCTGCCGCCCGCGCCTTGCACGCGCTCCGCCACGTCGCTCGTGC
CAAGACCGAACGCCGCCAGCCTCCGCGCCGCCCGCCGGACATAGCAACCCTGCGCGAAGAGGTGGGTCGGGGCGCGCCAC
CCCAGCCCGCACGCGCGCCGCGACCAACCAGGTCGCCGCGCAGCCCTGCTCCATCTCCTGCCTGCGCGCCCCCACTGGCC
ACGACGCGCCGGCCTCCGAGCACCGCCGCCAGACGAAGAAGAAGGCCCCCCGCGGCCCCTACTCCAGGCGAGCGCGAGCA
GATCCCGCCGCCACCGTCACCGCGCGGGCTTTGCCCGGCGGCGCCCGCCGGCGGCGGCGGCAGGGAGGGGAGGGAGAGGG
GGGATCGAGGGGCCGGCAGCTAGGGTTTGAGCACTCGGGTCGCCCGCGGGGGAGCGACACGGGGCCGGAGAGGATGAATT
CAGTGTTGAGGTTATTACTCTAATTGAAGAGAGTGGTATAGGGAGCTTTATGCGCATGTTTTAAAATGGCCAGAAAGCTC
GGCGAGGTGATACAAATTTCATGTGTCTACAGTCTATA---TACTAGTACTACTTAACATGG-CAGAAAGCTCGGCGAGG
AGTAT---------------------------------------------------------------------------
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>chr3A_1
TGTTGCTTTTAGTTGTGGATTGGAAGGCTAAATTTGCTTGGGTTTTTGTTTTCTGTTGGC-CTCAACTTTGAGG------
GTGAGACGAGAACAAACCC-TGGCTGGGCTGGCATCAGTTGCTGAATGGGAGCATTTCCGGAAGAAAACCCGACACGCGA
CGCGCCGGGACGTTACAACTTAAAAGCTTGGATTGTTGCAACAGCTAGCGCACACATACATTGCTTGCTTCAGGCTTCAG
CTCACAACAACCAGCACGCCACA------------------------TTTCTTTTCTCTTTTGTATAAAAAATATTAAAC
AA--GTCCATGTCGTAAGCCGAAAGAGCT-----GACAATATGCTCCGGCGGTAGAGACCCTGCATTGTA-------CTA
CTGGTGAGATCCATCGATTTTCTAGTTGTACATTCCACCAGTCAGTCAGTTTGGCACAGACTAATAATTAATCGAACACT
GGGATGCAACTACTAGTACTACACTAGTCCTAGT-GTACTTGGCACCGAAGGAAGGTTCCTGGGCGCACCGAATTTTAAG
CGCCTACAAATTCCTACTGGTACTCCT---CCTACTGGCTACCATACCAGTAGTGCTGTGCTGGATGGATTAAGAAAAGA
TTAACGTTCACTAGTCCAACGCATTACACTAGTA------TAGACTCGGAAGCCCAACAATCATTCATTCATTCCCCGTT
TTCTTCAACCAAAATCATTTTGATTCCGTGCCGCATAATATAACCGGACAAACAACTTAAGCATGTACCACTCCCCTCAC
CTC--AACTCACCTCACCTCACGTATATAACCAGCCAACAAGAAAGTAGACGCAGACAGAGC--AGGCCAGCAGATTAGC
GAAATAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATCCAAAAAGCTCCA
CACACGAACCATCTTGCTGCTGCTGCTGCTGCCGCCGCCGCTTTGGCCTTTCTGCGCTTTTGGCTTTCGCATCTCAACCG
TGCGACGACGCGAGGAATCAACACGGGCGCCATGGAGAGGACCGGTTCCGGCGCTGACGGCACGGGTCCTAGCACC---T
CCTCCTACTCCACCGCCGACGCCGACGACAATGGCACCGCCGCCGGCGCCAAGGTCTGGCTCCTCGTGCTCCTCTTCTCC
CTGCTCCTGCTGCTCTTCCTCCCCTCCGCGGTGCGCCGAGGCGGCGGCGGATTCCAGCGCGGAGGGATCACGCTCAAGAG
CGGCTGGGACGTCGTCAACCTCTGCCTCGTGCTCTTCGCCATCCTCTGCGGCCTGCTCGGCCGCGGCGGGGGCGACGCCG
ATGGGGAGGCCCCCGGCCCCGCGGCGCCGGCGCCCAAGAGCCATCTGCGGGTGTCCCCTGCGGCGGCGGCGGCGACGCCG
GAGCCGAGCACCGAGGACGTCTGGGCGAGCTTCAACAACTCCTACACCAACCACAACGCCCAGACGGGGATCCGGCGGAT
GAAGAGCAGCAGCTCCTACCCAGAGCTGCGCCTGGACAGCGACGGCGTCTGGGGCCTCGCGTCACCGGAGTTGGCCTGGC
GCTCCTACGACGATGCCGAGCTGTACCGGACCCGGCGAGACGAGCGGCCCGAAAGGGCCCGGGACGCCGATCGGACGCTC
AGGAGGACGTCGTCGGATGTGAAGACGATCCCGGTGGACACCTACGAGGTGCGCGCCAGACCGCTGTCTCAGGATGCGAG
GAGGCGGAGGCGGAGCGTCGAGAGGCTCCCCAAGATGGATGAGGTGGAGGAGGAGAGGACGCATCCTGTGGAGATGGAGA
CTCTCGCTACGCCGGCGAGGAGCAGGACCTGGAGCCCCGAGGAGCTGGACGCTACGCTGTTGGGGATGGCGTCCGCACCA
CCACTACCTGCCCCACCGCCGCAGCCTCGCCGTCGCCGACGCAGCCTCGAGAGGCTTCCCGAGATGGTGGAGGTGGAGGA
GGAGAGGACGCGTCCCACGGAGACTCGCGCTACGCCGGCGAGGAGCAGGACGTGGAGCCCGGAGGAGCTGGGCGCTACGC
TATTGGAGATGGCGTCCGCAGAACCACCACCTGCCCCGCCGCAGCAGCCTCGCCGTCGCCGCCGCAGCCTCGAGAACCTG
CCGACAATGGAAGAAGTGGAGAAGGAGATTATAGTGGAAGAGGTCAATCACCCGCAGTCGCCATCGCCAGCCATGTTTCC
CCCAGGGACTCCGCCGCCACCACCTCCTCCGCCACCGGCGGCAATGTCGAGGAGCAAGAAGAAGAGGAGCGGCAGCGTGG
GCGGCGCCAAGGAACTGGCCTCCGCCATTGCTCTCTTCTACCAGAAGAAGCGCAAGAGCATTATCATGAAGAGGGAGAGG
---CACCACCACCACCACCACCATCTCTCCGATGACCACTACTCGTCGCCTTCGTCCGAAGCATCGGCGAGCCCCGAAGC
TACGGGCCGTACCAATCCTCCACGCCCACCACCGCCGCCTCCCCCTCCCCCGCCGCCGCCGTCATCCATCTTTTCCAACC
TCTTCAAGAAAGGAGGCAGCAAGAGCCGGCGCATGAACTCCCTCGCGCCACCGCAACCGCCACCTCCGCCCCTACCAACG
CGCCGATCAAGGAAACCACCACAGCCTCCGTCTCGCCCCGCTCCTCCGCAGCCAGCGCCAGCTCCAGTGAGGACACGGCC
GCCGCGCGCGAGCGCGCACCCGCAACAGCAGATACGCGCGCAGGGGTATCCGCAGCAGCCGCCACTGTATCCCAGGCGCG
GTGTCGTGTACTACGCCTACCCGCTTCCTCCGCCGTCGCCCCCAATGCCGCCACCGCCTCCTCCACCGCCGATGCTGGAG
GGGGAGGAGGAGGTTCCGTCGGTCACTGCGTCGCCGGCACCGTCGTACTGCGCGAGCCCCGACGTAAACACCAAGGCGGA
CAACTTCATCGAACGCTTCCGCGCCGGGCTGAAGCTGGAGAAGATCAACTCGTACCGGGAGAAGCTGCAGATCCAAGAAG
GCGCGACCGTGACCGTGGCGGAGGAGGACGGGGAGTTCATGGTCATTGGGTCCCTCTTCGAAGATGATGATGACGATATG
TCGTTGCCGGAGACGCCGGCAACCGCCACCGCGGGCGCGGCCGCTGTTGCCGTCGGCTTCTAAATTCGAATTCTGCTTCC
GACTTCCGAGGTGTTGCATTGACACTTGGAGAAAAGAGAGAGAAAAACGAATAAAAAAA--TTGAAAACAAACAAAAAGA
AAAAGAAACTTATTTCGGGTATTGGGTTATTTGCGGTATTTTCCATGAGATTTGGTTCACTTTTCTTGTCCATTTTTTGG
GTAGTTTAGGAGAATTGACAGTGAGATTGGGTTATTGATTGCTTGTGGAGAGGAT-------------------------
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---------------------------------------------------------------------------GAATT
CAGTGTTGAGGTTATTACTCTAATTGAAGAGAGTGATATAGGGAGCTTTATGCGCATGTTTTAAAATGGCCAGAAAGCTC
GGCGAGGTGATGCAAATTTCATGTGTCTACAGTCTATATACTACT-----------------------------------
-GTATAGTCGTAGAAAGTGAAAGAGCTTTACAATTTATTTATTTTGAATCATCATGTTGTACGTGCAATAATACTACACC
TTGTGGACGGTGATCGTGGATGATTTGCCTACGCTGATATACCACGTACGTACTCGTACGTTTCGTTTTTGTAGTGTTGC
ATGAGCTGTCAAGTTCAATGCTTTTGGTGTTTGGATATTGGTGCGGTTTGGGGGTATGATTTGCTTTGATTGTGCCCAGT
TGTGCTAATCATATTTTGGGCCTCGTGTGGTTGGGCACCATCCATCCACACAACCAAATGCTGCATGCATCACCAACCTC
AAATCAAAATAGAAAACACATGCAAAT-----------------------------------------------------
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>SNPs
----------------------S--------------S------------------------------------SSSSSS
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----------------------------------------------------------------S----------S----
--SS----------------------------------------------------------------------------
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-------------------------SSSSSSS--S---------------------------------------------
---------------------------SSS--------------------------------------------------
------------------S---------------SSSSSS----------------------------------------
----------------------------------------S---------------------------------------
---SS---------------------------------------------------------------------------
-------------------------------------------------------------------S------------
------------------------S--------------------------------------S----------------
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--------S-----------------------------------------------------------------------
-----------------------------S--------------------------------------------------
----S-------------------------------------------------S-------------------------
-------------S---------S---S---------------------------------S------S-----------
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----------------------------------S---------------------------------------S-----
--------------S-----------------------------------------------------------------
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--------------S-S---------------------------------------------------------------
---------------------------------------------------------------S----------------
-------------------------------------S------------------------------------------
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---------------------S-----------------------------------------------------S----
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-----------------S-----------------------------------------------------S--------
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-------------------------------------------------------S------------------------
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-------------------S--------------------------------S------S--------------------
--------------------------------S--------------------SS-------------------------
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-------------------------------------------S------------------S-----------------
------------------------S-------S-----------------------------------------------
-----S-------------------------S-----------------------S-----S------------------
----------S--S-S----S---SS------------------------------------------------------
------S------------------S--------------------------------S-S-------------------
-----------------S---------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_805
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-----------------------------------------------------------------TACCACTCCCCTCAC
CTCAG---------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------
>reverse_1695
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------CGATGTGAAGACGATCCCGG----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------
>forward_1129
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------TAGCACCTCCT
CCTCCTACC-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------
>reverse_3016
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------AGGGAGAAGCTGCAGATCCA-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------
>forward_2316
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------AGAAGAAGAGGAGCGGCAGT----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------
>reverse_5676
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------GCTTT
GGCCAATCGAAACCA-----------------------------
