>input_sequence_38226
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--ATGATGGAGGACTCTTCAACTAGGAGCCATGTTTTTGAGGGGAATCGGCTGGGCTATGTAAGAAGTGAATCCATGGAT
TCCGCTGGCCATCCTTCGGCTGCTAGGTCAGGCTCACTGCTAAGTAGGAGAAGTAGCAGGCCCAGTTCAAGGGGATCCAT
CAGCCTCTCTCGCGAGATGGGCGACTCGATCCTGAACTCAATGAGGCATTCCCTTCAGTCAGCAGACCAGTTGCTTGGTC
ATGCTGATAGCTCGGCTTTGGCTCAGGTCATTGACAGTGGTGACCGAGTGCTAGCCTTGGAAGATGAGGCCGATGAAGAT
ATGGCAAATACATTGGATCAACAT---------CCTGTCCGAGATAATCGAATCCATGGCTACAGCTCACATGGCACAGG
TCTGCCAGCACCTGAGTCTTCTCTGGAGCCAAAGGGCGAGAGCTCATCAGGCAAGGTACAAAATTGTACTTTGAGTTGAG
TGATTGCTTGCAATAATCAATCAAATGATTATGCTGTCTAGCACTATTGCAAGGCTGTACGTTGTGCTATAGATTCTAAA
ATGAACATGTCTATGCTTTCCTGCAGGTTGAACAATATATGCTTTCTCGGAGGCTAGATTATGCTTCTTACCTGATCCAT
TTAGCCGCCTTTGGATCATTCGGGGTAACTCTCCAAATCGTTGTCTACTGTTGTTTGTATTAGGTATTAATTACTAAGTG
GTCTTCCTTAGTGTACATAAATGTAGCGGAAGATTGATGAAAGTTCAGGGGACATTTTTACTTTAAACC----CATGCAT
GCGTTCAGAAAACATTTACCGTGGTACCATCCCTTTCCATTACCATAATTATGTTTTTGATGTCCAAATTAGGTATTTAC
AAGGTACGGGCTCCAAAAGCTGTTCGGCCCAGGCTGCCTGGCACTCACCTCCAACCAAAGCCCGTTGTACCTTGATCTTC
CATCAAACATGGTATGTTCTATCCTGTACCTGCTCAAGTAAAAAAAACACCAGGGATTTGGGCTGTACTGACGCATGTTA
ATGCCCAAATGTTTGTGCATCAGCTAGGATCCTTCCTGATGGCCTGGTTTGGGATAATCTTTAAGACTGACATTCGGCAC
ATATCTGAACATCTCATTGTTGGAATCACAACCGGATACATGGGAAGCCTTACCACCTTCAGTGGGTGGAATCAAGCGAT
GGTTAGCATGTCTTCCAAAGACCATTGGGCATATGCCATAGCTGGCATAGTATTAGGTACCTCATCATAATTTTCTATAA
AGTGCTATTAGTCCAAAATTAGTTACCGCTAAGTAAAGACATAAGGGAAATCATTCTTTTGATGATTAACAACACTAACC
TACTCAGGAATGTTCATCGTCAATGAGTCCATCAGGGTGGGCGCCGAAACAGGTGAGCGCCTACGAAGCTGGATCCTGAA
ATGCATCAAGGAAAATAGTTCAATAGGAAGCAACTGTAACTGGGAGCAGCTGAAAGTCAACACTAGGACTAAACATTTTG
TGCTTATAGCAGTTATGATGATTTTGCTTTCTTTTGTGTGGGTTCTGAGTATCGTGTTGGCCATAATAAAGGTGCGCAAT
CTTGATGATGGCGCTGTACTATGGTTGGGGTGCTCGGTTGCGCCTCCAGGCGTTTGGTTACGCTGGTACTTGGCAAGGCT
CAATGGCCAGGGAATCGGCAAACAGAGATCCCTCAAATGGCTGCCCATTGGGACACTTGTAGCCAATGTTCTTGCTGCGG
GTATCATGGCATCACTGGCTGTGACCGCCAAAGCGGTATGATAGCTAAAGCATGTGTTTATACGGTTTATGTAAATTGCG
TTGCTATCTCTCTGATTGGTTT-AGTCTTTCTGTAGGTGAATACAAAGCGTTCGACAACTGTTCTTAATGGCATACAGTT
TGGTTTCCTTGGCTGCTTGAGCACAGTGTCTACTTTTGCTGCTGAAATCTATGCTATGCGAAGCAGCGGACAGATTGGTA
GGGCCTTTGTCTATGCTGCAGCGACCTTCGTGCTCTCTTTCGTGCTGGGAACTCTGGTATACTCTGTGCCAGTATGGGTC
AATCATTACCAATAG-----------------------------------------------------------------
--------------------------------------------------------------------------------
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--
>chr1B_1_TraesCS1B01G228100
GATGGTTAAATCCGATCAACAAAGAAGCCGCAAGATACAGGCATGGCTCGCGACCATTATACGAGTAGAAGGATGCGCCC
GCCCTTTTCTGAGACGGCGAAAAACGACCGGCGACGGCGGGTACGCGGGCGGCGTGGGGTCCCGCCGATCTCCCTCCCAC
CTTCCTTGACCAAGCGAGTGCGCTTCGGCAGCTAAAGGCGCCGGGGATTAGACTGGGTTCACAATTAGTTTAGTGTCCAT
GTCAAAAAGGCCAGCTCCTTTGCACTAGCTTCTCTTCTGGAAATTCATTTGTTTATCCAGTAGCAGCCTAATTAGCAGAC
GCCACATGTTTCGCTAAGCGCCGTGCTGATTGAAATGGTGCCGTCACCGC--------------TGTCTGCATCTACTTA
ATTATTTCACTGGTTAGTTAGCTCTTCTGTTAAATTCTGGTGGTGGCTCCACACTTTGGCTCTTCTTTTGGATTTTGATC
CCACTGATTGGCTATTGTTGTCTTGGGCTCTTGATCTTGCTTTCAGCTGGTATACCCTATCCCTGCGTATGATCACTTCA
CTGATCAGTATAG---------TTAGTTCAGTACCCCATGTGTATGTGCCAGGAAT-CTTTTTTCAGAGTTCTTTATGTG
CCCTTCAGTATATAAC--------------CAGCTATGTTATTTTCACCTTTTGTTAAAATTTTGAGCTA--GTG-TTTT
TTCTTCTTACTTTCTGAACTTTGCTGGGCACTACTAATATGTTTTGAACTCGTTGGGATTGGCTAGAGAAAGGAGTTTGT
G-AATTTTCAAAAAGATTTTCCATGACCTTGTGCGGTACTAATATGTTTTTGATGTGATTGGTCCAGCTTCACCCAACAA
ATATACCCCCAATCTATCTCTTTGTCCTGCTCATTGTCTGGTTCCTATTGCTTCCTGATTTTATAAGGCATGGATTGGTG
GCGATTGATTTTGAAAAACTACTCTCTTTTTCTGTGGCAGTGCTCTTACATCTCTTGTAGCTAGCTGGAAAAGCGAGCTT
GCATGATGGAGGACTCTTCAACTAGGAGCCATGTTTTTGAGGGGAATCGGCTGGGCTATGTAAGAAGTGAATCCATGGAT
TCCGCTGGCCATCCTTCGGCTGCTAGGTCAGGCTCACTGCTAAGTAGGAGAAGTAGCAGGCCCAGTTCAAGGGGATCCAT
CAGCCTCTCTCGCGAGATGGGCGACTCGATCCTGAACTCAATGAGGCATTCCCTTCAGTCAGCAGACCAGTTGCTTGGTC
ATGCTGATAGCTCGGCTTTGGCTCAGGTCATTGACAGTGGTGACCGAGTGCTAGCCTTGGAAGATGAGGCCGATGAAGAT
ATGGCAAATACATTGGATCAACAT---------CCTGTCCGAGATAATCGAATCCATGGCTACAGCTCACATGGCACAGG
TCTGCCAGCACCTGAGTCTTCTCTGGAGCCAAAGGGCGAGAGCTCATCAGGCAAGGTACAAAATTGTACTTTGAGTTGAG
TGATTGCTTGCAATAATCAATCAAATGATTATGCTGTCTAGCACTATTGCAAGGCTGTACGTTGTGCTATAGATTCTAAA
ATGAACATGTCTATGCTTTCCTGCAGGTTGAACAATATATGCTTTCTCGGAGGCTAGATTATGCTTCTTACCTGATCCAT
TTAGCCGCCTTTGGATCATTCGGGGTAACTCTCCAAATCGTTGTCTACTGTTGTTTGTATTAGGTATTAATTACTAAGTG
GTCTTCCTTAGTGTACATAAATGTAGCGGAAGATTGATGAAAGTTCAGGGGACATTTTTACTTTAAACC----CATGCAT
GCGTTCAGAAAACATTTACCGTGGTACCATCCCTTTCCATTACCATAATTATGTTTTTGATGTCCAAATTAGGTATTTAC
AAGGTACGGGCTCCAAAAGCTGTTCGGCCCAGGCTGCCTGGCACTCACCTCCAACCAAAGCCCGTTGTACCTTGATCTTC
CATCAAACATGGTATGTTCTATCCTGTACCTGCTCAAGTAAAAAAAACACCAGGGATTTGGGCTGTACTGACGCATGTTA
ATGCCCAAATGTTTGTGCATCAGCTAGGATCCTTCCTGATGGCCTGGTTTGGGATAATCTTTAAGACTGACATTCGGCAC
ATATCTGAACATCTCATTGTTGGAATCACAACCGGATACATGGGAAGCCTTACCACCTTCAGTGGGTGGAATCAAGCGAT
GGTTAGCATGTCTTCCAAAGACCATTGGGCATATGCCATAGCTGGCATAGTATTAGGTACCTCATCATAATTTTCTATAA
AGTGCTATTAGTCCAAAATTAGTTACCGCTAAGTAAAGACATAAGGGAAATCATTCTTTTGATGATTAACAACACTAACC
TACTCAGGAATGTTCATCGTCAATGAGTCCATCAGGGTGGGCGCCGAAACAGGTGAGCGCCTACGAAGCTGGATCCTGAA
ATGCATCAAGGAAAATAGTTCAATAGGAAGCAACTGTAACTGGGAGCAGCTGAAAGTCAACACTAGGACTAAACATTTTG
TGCTTATAGCAGTTATGATGATTTTGCTTTCTTTTGTGTGGGTTCTGAGTATCGTGTTGGCCATAATAAAGGTGCGCAAT
CTTGATGATGGCGCTGTACTATGGTTGGGGTGCTCGGTTGCGCCTCCAGGCGTTTGGTTACGCTGGTACTTGGCAAGGCT
CAATGGCCAGGGAATCGGCAAACAGAGATCCCTCAAATGGCTGCCCATTGGGACACTTGTAGCCAATGTTCTTGCTGCGG
GTATCATGGCATCACTGGCTGTGACCGCCAAAGCGGTATGATAGCTAAAGCATGTGTTTATACGGTTTATGTAAATTGCG
TTGCTATCTCTCTGATTGGTTT-AGTCTTTCTGTAGGTGAATACAAAGCGTTCGACAACTGTTCTTAATGGCATACAGTT
TGGTTTCCTTGGCTGCTTGAGCACAGTGTCTACTTTTGCTGCTGAAATCTATGCTATGCGAAGCAGCGGACAGATTGGTA
GGGCCTTTGTCTATGCTGCAGCGACCTTCGTGCTCTCTTTCGTGCTGGGAACTCTGGTATACTCTGTGCCAGTATGGGTC
AATCATTACCAATAGCTTCATGAAGTATTACAGACTTGAAGGCTTTGGCATCATTTTGCTGGTTGCAACATCCAAGCAGA
TAGCGCAATTCTCAACATACATAGTTAGGCTTTTCTAGGGAATTTTGTCTGCTTCTTTAAGATATTTGATGTACCATGTA
CGTTGTTGAACATGATGGCATTTTGCAGCAGAAACATGTTTGTACACAACATCTGCCATTGTAATCCTGTGAACAACAAC
ATCCATATTTATGGAGTATGTATATGAAATGTTACAGTTTATATCTTAGGTACGCATATGAAATGAATGTATCACCTGTA
GAAGCAAAAGAAAA-ACAACATCCATGTTTATGGATTAGCTTTGTCACACATATTTGTACACAAACAACATACATGATTT
ATGCACCAGCATCAGAAATATATTGCTAAATTTGCAATAGCCTATGTTTATTTGTTTCATCTGCCATGTAATCCTGTGGA
CACAACTACATGCTAACCTGAGCAAAATCATATTTCCTTGCTGTAATGCAAGGTATCTGTACATCATTTTCTAAAACTGG
ACACAGATGCAGATACAATATGGATGATGAATTATTTGTACCTACAAACTT-------------------TCAAGTGAAT
GTAGCGCAGAAAAATAGTAATGCTGAGCTTCCTGTTTCGGTGTGTCCTGTGTCCATTGGCATGTGACATGACAAAGCGAT
GTTAGCTTGACAATATTTGTGAAATCGCTTTTTCACTCTTTACTTGGTATGCCAAGCCGCAGC--ATTATTTGCTCAAGA
ATATCCGTTCCCTCTTCCTTCAATTACACCAGGCCCAGCAGAACGCCCATGTCTGCAGGTCCCTTCACCACCGATTCTTT
ATGATGCCACTGCTACATCACACTTGTTCAGGGATGCACTTA-----TCCAGTCTCTGTTCACAAAAGAATGTCTCCTGT
GCAAAGAACAAACAGCTTTCACCATGCCAAAGTTCTTATCACAAAGTAATTTGTCTGCCTGAGCCTTCTTCAACATGGGA
GT
>chr1D_1
GATGGGTAAATCCGATCGACAAAGAAGCCGTAAGATACAGGCATGGCTCGCGACCTTTAGACGAGTAGAAGGATGCGCCC
ACCCTTCTCCGAGACGGCGAAAAACGACCGGCGATGGCTGGTACGCGCGCGGCGTGGGGTCCCGCCGATCTCCCTCCCAC
CTTCCTTGACCAAGCGAGTGCGCTTCGGCAGCTAAAGGCGCCGGGGGATTAGACTGGTTCACCATTAGTTTAGTGTCCAT
GTCAAAAAGGCCAGCGCCTTTTCACTAGCTTCTCTTCTGGAAATTCATTTGTTTATCCAGTAGCAGCCTAATTAGCAGAC
GCCACATGTTTCACTAAGCATCGTGCTGATTGAAATGGTGCTGTCACCT----------------------ATCTACTTA
ATTATTTCACTGGTTAGTTAGCTCTTCAGTTAAATTCTAGTGGTGGGTCCACAGTTTGGCTCTTCTTTTGGATTTTGATC
CCACTGATTGGCTATTGTTGTCTTGGCTCGTCGTTGTTGCTTTCACTTTCAGTACCCTATCCCTGCGTATGACCACTGAT
CAGTAATTCAGTATAGTTAGTTTTAGTTCAGTACCCCATGTGTATGTGCCAGGAATTCTTTTTTCAGAGTTCTTTATGTG
CCGTTCAGAAACTGATCAGTACATAACCAGCAACTGTGTTATTTTCACCTTTTGTTAACATTTTGAGCCATGGTACTTTT
TTTTTCTTACTTTCTGAACTTTGCTGGGCACTACTAATATGTTTTGCACTCGTTGGGATTGACTACAGAAAGGAATTTGT
G-ATTTTTCAAAAAGATTTTCCACGACCTTGTGCAGTACTAATATGTTTTTTATGTGATTGATCCAGCTTCAGCCAACAA
ATATACCCCCAATCTATCTCTTTGTCCTGCTCATTGTCTGGTTCCTATTGCTTCCTGATTTTATGAGGCATAAATTGGTG
GCAATTCATTTTGAAAAACTACTCTCTTTTTCTGTGGCAGTGCTCTTACATCTCTTGTAGCTAGCTGGAAAAGCGAGCTT
GCATGATGGAGGACTCTTCAACTAGGAGCCATGTTTCTGAGGGGAATCGGCTGGGCTATGTAAGAAGTGAATCCATGGAT
TCCGCTGGCCATCCTTCGGCTGCTAGGTCAGGCTCACTGCTAAGCAGGAGAAGTAGCAGGCCCAGTTCAAGGGGATCCAT
CAGCCTCTCTCGTGAGATGGGCGACTCGATCCTGAACTCAATGAGGCATTCCCTTCAGTCAGCAGACCAGTTGCTAGGTG
ATGCTGATAGCTCGGCTTTGGCTCAGGTCATTGACAGTGGTGACCGAGTGCTAGCCTTGGAAGATGAGGCCGATGAAGAT
ATGGCAAATACATTGGATCAACATAAGTTCGGTCCTGTCCGAGATAATCGAATCCATGGCTACAGCTCACATGTCACAGG
TCTGCCAGCACCTGAGTCTTCTCTGGAGCCAAAGGGCGAGAGCTCATCAGGCAAGGTACAAGATTGTACTTTGAGTTGAG
TGATTGCTTGCAATTATCAGTCAAATGATTATGCTGTCTAGCACTATTGCAAGGCTGTACGTTGTGCTATAGATGCTAAA
ATGAACATGTCTATGCTTTCCTGCAGGTTGAACAATATGTGCTTTCTCGGAGGCTAGATTATGCTTCTTACCTGATCCAT
TTAGCTGCCTTTGGATTATTTGGGGTAACTCTCCAAATCGTTGTCTACTGTTGTT---ATTAGGTGTTAATTACTAAGTG
ATCTTCCTTAGTGTACATAAATGCAGCGGAAGATCGATGAAAGTTCAGGGGACATTTTTACTTTAAACC----CATGCA-
---TTCAGAAAACATTTACTGTTGTACCATCCCTTTCCATTCCCGTAATTACGTTTTTGATGTCCAAATTAGGTATTTAC
AAGGTATGGGCTCCAAAAGCTGTTCGGCCCAGGCTGCCTGGCACTCACCTCCAACCAAAGCCCGTTGTACCTTGATCTTC
CATCAAACATGGTATGTTCTATCCTGTACCTGCTCAAGTAAAAAAA-CACCAGGGATTTGGGCTATACTGACACATGTTA
ATGACCAAATGTTTGTGCATCAGCTAGGATCCTTCCTGATGGCCTGGTTTGGGATCATCTTTAAGACAGACATTCGGCAC
ATATCTGAACATCTCATTGTTGGAATCACAACCGGATACATGGGAAGCCTTACCACCTTCAGTGGGTGGAATCAAGCGAT
GGTTAGCATGTCTTCCAAAGACCATTGGGCATATGCCATAGCTGGCATAGTATTAGGTACCTCATCATAATTTTCTATAA
AGTGCTATTAGTCCAGAATTAGTTAC-GCTAAATATAGACACAAGGGAAATCATTCTTTTGATGATTAACAACACTAACC
TAATCAGGAATGTTCATCGTCAATGAGTCCATCAGGGTGGGCGCCGAAACAGGTGAGCGCCTACGAAGCTGGATCCTGAA
ATGCATCAAGGAAAATAGTTCAATAGGAAGCACATGTAACTGGGAGCACCTGAAAGTCAACACTAGGACTAAACATTTTG
TGCTTATAGCAGTTATGATGATTTTGCTTTCTTTTGTGTGGGTTCTGAGCATCGTGTTGGCCATAATAAAGGTGCGCAAT
CTTGATGATGGCGCTGTACTATGGTTGGGGTGCTCGGTTGCGCCTCCGGGCGTTTGGTTACGCTGGTACTTGGCAAGGCT
CAATGGCCAGGGAATCGGCAAACAGAGATCCCTCAAATGGCTGCCCATTGGGACACTTGTAGCCAATGTTCTTGCTGCAG
GTATCATGGCATCACTGGCTGTGACCGCCAAAGCGGTATGATAGCTAAAGCATGTGTTTATACGGTTTATGTAAATTGTG
TTGCTATCTCTCTGATTGGTTT-GGTCTTTCTGTAGGTGAATACAAAGCATTCGACAACTGTTCTTAATGGCATACAGTT
TGGTTTCCTCGGCTGCTTGAGCACAGTGTCTACTTTTGCTGCTGAAATCTACGCTATGCGAAGCAGCGGACAGGTTGGTA
GAGCCTTTGTCTATGCTGCAGCGACCTTCGTGCTCTCTTTCGTGCTGGGAACTCTGGTATACTCTGTGCCAGTATGGGTC
AAGCATTACCAATAGCTTCATGAAGTATTGCAGACTTGAAGGCTTTGGCGTCATTTTGCTGGTTGCAACATCCAAGCAGA
TAGCGCAATTCTCAGCATACATAGTTAGACTTTTCTAGGGAATTTTATCTGCTTCTTTAAGATATTTGATGTAT------
-GTTGTTGAACATGATGGCGTTCTGCAGCAGAAACATGTTTGTACACAACATCTGCCATTGTAATCCTGTGAACAACAAC
ATCCATATTTATGGAGTATGTATATGAAATGTTACAGTTTATATCTTAGGTATGCATATGAAATGAATGTATCACCTGTG
GTAGCAAAAG-AAA-ACAACATCCATGTTTATGGAGTAGCTTTGTCACGCATGTTGGTACACAGACAACATACACGATTT
ATGCACCAGCATCAGAAATATATTGCTAAATTTGCAATAGCCTATGTTTATTTGTTTCATCCGCCATGTAATCCTGTGGA
CACAACTACATGCTAACCTGAACAAAATCACATTTCCTTGCTGTAATGCAAG-TATCTGTACAACATTTTCTGAAACTGG
ACACAGATGCAGATACAATATGGATGATGAACTATTTGTACCTACAATTTTTCAAGTGAATGCAGCAATCTCAAGAAGGC
CA---GCAGAAAAATAGTAATGCTGAGCTTCCTGCT--------TCCTGTGTCCATTGGCATGTGACATGACAAAGCGAT
GTTTACTTGAAAATATTTGTGAAATCACTTCTTCGCTATTTACTTGGTATGCCAAGTCGCAACGCATTATTTGCTCAAGA
ATATCTGTT-CCTCTTCCTTCAGTTACGCCACGCCCAGCAGAACCCCCATGTCCGCAGGTCCCTTCACCACCGATTCTTT
ATGATGCAATTGTTATACCGCGCTTGTTCAGGGATATGATGCACCTGTCCAGTCTCTGTTCTCAAAAGAATGTCTCCTGT
GCAAAGAACAAACAGCTCTCACTGTGACAAAGTTCTTATCAC-AAGTAATCTGTCTGCCTGAGCATCCTTCAACATTGGA
GT
>chr1A_88
--------------------------------------------------------------------------------
-------TCCGAGACGGCGAAAAAGGACCGGCGACGGCGGGTACGCGGGCGGCGTGGGGTCCCGCCGATCTCCCTCCCAC
CTTCCTTGACCAAGCGAGTGCGCTTCGGCAGCTAAAGGCGCCGGGGGATTAGACTGGTTCACCATTAGTTTAGTGTCCAT
GTCAAAAAGGCCAGCGCCTTTTCACTAGCTTCTCTTCTGGAAATCCATTTGTTTATCCAGTAGCAGCCTAATTAGCAGAC
GCCACATGTTTGGCTAAGCGCCGTGCTGATTGAAATGGTGCCGTCAACGTTGCCAACATGTTCTTGTCTGCATCTACTTA
ATTATTTCACGGGTTAGTTAGCACTTCCGTTAAATTCCGGTGGTGGATCCACCGTTTGGCTCTTCTTTTGGATTTTGATC
CCACTGATTGGCTCTTCCTGTCTTGGGCTCTTGGTCTTGCCTTCAGCTGGTGTACCCTATCCCTGCGTATGATCACTTCA
CTGATCAATATAG---------TTACTTCAGTACCCCATGTGTATGTGCCAGGAAT-CTTTTTTCAGAGTTCTTTATGTG
TCCTTCAGTACATAAA--------------CAGCTATGTTATTTTCACCTTTTGTTAACATTTTGAGCTATGGTG-TTTT
TTCTTCTTACTTTCTGAACTTTGCTGGGCACTGCTAATATGTTTTGAACTCGTTGGGATTGGCTAGAGAAAGGAATTTCT
GAATTTTTAAAAAAGATTTTCCACGGCCTTGTGCAGTACTAATATGTTTTTGATGTGATTGGTCCAGCTTCAGCCAAAAA
ATATACCCCCAATCTATCTCTTTGTCCTGCTCATTGTCTGGTTCCTATTGCTCCCTGATTTTATAAGGCATGTATTGGTG
GCGATTGATTTTGAAAAACTACTCTCTTTTTCTCTGGCAGTGCTCTTACATCTCTTGTAGCTAGCTGGAAAAGCGAGCTT
GCATTATGGACGACTCTTCAACTAGGAGCCATGTTTCTGAGGGGAATCGGCTGGGCTATGTAAGAAGTGAATCCATGGAT
TCCGCTGGCCATCCTTCGGCTGCTAGGTCAGGCTCACTGCTAAGCAGGAGAAGTAGCAGGCCCAGTTCAAGGGGATCCAT
TAGCCTCTCTCGCGAGATGGGCGACTCGATCCTCAACTCAATGAGGCATTCCCTTCAGTCAGCAGACCAGTTGCTAGGTG
ATGCTGATGGCTCGGCTTTGGCTCAGGTCATTGACAGTGGTGACCGAGTGCTAGCCTTGGAAGATGAGGATGATGAAGAT
ACGGCAAATACATTGGATCAACATAAGTTCGGTCCTGTCCGAGATAATCGAATCCATGGCTACAGCTCACATGGCACAGG
TCTGCCAGCACCTGAGTCTTCTGTGGAGCCAAAGGGCGAGAGCTCATCAGGCAAGGTACAAAATTGTACTTTGAGTTCAG
TGATTGCTTGCAATTATTAATCAAATGATTATGCTGTCTAGCACTATTGCGAGGCTGTATGGTGTGCTATAGATGCTAAA
ATGAACATGTCTATGCTTTCCTGCAGGTTGAAGAATATATGCTTTCTCGGAGGCTAGATTACGCTTCTTACCTGATCCAT
TTAGCTGCCTTTGGGTTATTTGGGGTAACTTTCACTGTTGTTTG----------T---ATTAGGTGTTAATTACTAAGTG
ATCTTCCTTAGTGTACGTAAATGTAGCGGAAGATCGATGAAAGTTCAGGGGACATTTTTACTTTAAACTCATGCATGCA-
---TTCAGAAAACATTTACCGTTGTACCATCCCTTTCCATTCCCGTAATTACGTTTTTGATGTCCAAATTAGGTATTTAC
AAGGTATGGGCTCCAAAAGCTGTTCGGCCCAGGCTGCCTGGCACTCACCTCCAACCAAAGCCCGTTGTACCTTGATCTTC
CATCAAACATGGTATGTTCTATCCTGTACCTACTCAAGTAAAAAAC-CACCAGGGATTTGGGCTATACTGACACATGTTA
ATGCCCAAATGTTTGTGCATCAGCTAGGATCCTTCCTGATGGCCTGGTTTGGGATCATCTTTAAGACTGACATTCGGCAC
ATATCTGAACATCTCATTGTTGGAATCACAACCGGATACATGGGAAGCCTTACTACCTTCAGTGGGTGGAATCAAGCGAT
GGTTAGCATGTCTTCCAAAGACCATTGGGCATATGCCATAGCTGGCATAGTATTAGGTACCTCATCATAATTTTCTATAA
AGTGCTATTAGTCCAAAATTAGTTACCACTAAATAAAGAGATAAGGGAAATCATTCTTTTGATGATTAACAACACTAACC
TACTCAGGAATGTTCATCGTCAATGAGTCCATCAGGGTGGGCGCCGAAACAGGTGAGCGCCTACGAAGCTGGATCCTGAA
ATGCATCAAGGAAAATAGTTCAATAGGAAGCAAATGTAACTGGGAGCACCTGAAAGTCAACACTAGGACTAAACATTTTG
TGCTTATAGCAGTTATGATGATTTTGCTTTCTTTTGTGTGGGTTCTGAGCATCGTGTTGGCCATAATAAAGGTGCGCAAT
CTTGATGATGGCGCTGTACTATGGTTGGGGTGCTCGGTTGCGCCTCCGGGCGTTTGGTTACGCTGGTACTTGGCAAGGCT
CAATGGCCAGGGAATCGGCAAACAGAGATCCCTCAAATGGCTGCCCATCGGGACACTTGTAGCCAATGTTCTTGCTGCGG
GTATCATGGCATCACTGGCCGTGACTGCCAAAGCGGTATAATAGCTAAAGCATGTGTTTATACGGTTTATGTAAATTGTG
TTGCTATCTCTCTGATTGGTTTTGGTCTTTCTGTAGGTGAATACAAAGCGTTCGACAACTGTTCTTAATGGCATACAGTT
TGGTTTCCTCGGCTGCTTGAGCACAGTGTCTACTTTTGCTGCTGAAATCTACGCTATGCGAAGCAGCAGACAGATTGGTA
GGGCCTTTGTCTATGCTGCAGCGACCTTCGTGCTCTCTTTCGTGCTGGGAACTCTGGTATACTCTGTGCCAGTATGGGTC
AAGCATTACCAATAGCTTCATGAAGTATTACAGACTTGAAGGCTTTGGCGTCATTTTGCTGGTTGCAACATCCAAGTAGA
TAGCGCAATTCTCAGCATACATAGTTAGGCTTTTCTAGGGAATTTTGTCTGCTT-TTTAAGATATTTGATGTAC------
-GTTGTTGAACATGATGGCGTTCTGCAGCAGAAACATGTTTGTACACAACATCTGCCGTCATAATCCTGTGGACGAGAAC
ATCCATATTTATGGAGTATGTATATGAAATATTACAATTTATATCTTAGGTATGCATATGAAATGAATGTATCGCCTGTA
GTAGCAAAAG-AAAAACAACATCCATGTTTATGGATTAGCTTTGTCACACATGTTTGTACACAAACAACATACACGATTT
ATGCACCAGCATCAGAAATATGTTGCTAAATTTGCAATAGCCTATGTTTATTTGTTTCATCCGCCATGTAATCCTGTGGA
CACAACTACATGCTAACCTGGGCAAAATCACATTTCCTTGCTGTAATGCAAG-TATCTGTACATCATTTTCTGAAACTGG
ACACAGATGCAGATACAATATGGACGATGAATTATTTGTACCTACAAACTT-------------------TCAAGAAGGC
CA---GCAGAAAAATAGTAATGCTGAGCTTCCTGTTTCGGTGTGTCCTGTGTCCATTGGCATGTGACATGACAGAGCGAT
GTTTGCTTGACAATATTTGTGAAATCGCTTTTTCACTCTTTACTTGGTATGCCAAGCCGCAGCGCATTATTTGCTCAAGA
ATATCCGTTCCCTCTTCCTTCAATTACACCACGCCCAGCAGAACTCTCATGTCTGCAGGTCCCTTCACCACCGATTCTTT
ATGATGCCACTGCTACATCACACTTGTTCAGGGATGCACTTA-----TCCAGTCTCTGTTCACAAAAGAATGTTTCCTGT
GCAAAGAACAAACAGCTTTCACCATGCCAAAGTTCTTATCACAAAGTAATTTGTCTGCCTGAGCCTTCTTCAACATGGGA
GT
>SNPs
-----S-----------S------------S------------------------S---S--------------------
S-----S--S----------------------------------------------------------------------
----------------------------------------------SS-SSSSSS-------S-----------------
---------------S-----S----------------------------------------------------------
-------------------------------------------------S------------------------------
---------------------------S------------------S------S--------------------------
---------------------------------S-----------------S----------------------------
-------S------------------------------------------------------------------------
----------S----S------------------------------------------S---------------------
--------------------------------------------------------------------------S-----
---S-------------------S----------S-------------------------------------S-------
------------------------------------------------------------------------S-------
--------------------------------------------------------------------------------
------------------------------------S-------------------------------------------
--------------------------------------------S-----------------------------------
---------------------------------------------------------------------------S---S
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------S-----------------------------------------------------------S-----
--------------------------------------------------------------------------------
-----S----------S---S----------------------------------SSS-------S--------------
S---------------------------------S--------------------------------------------S
SSS-------------------S------------------S--S------S----------------------------
------S-------------------------------------------------------------------------
----------------------------------------------S-----------------S-------S-------
-------------------------------------------------------S------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------S-----------------------------------------------
--------------------------------------------------------------------------------
---------------------------------S--------------S-------------------------------
-------------------------------------------------S------------------------------
-----------------------------------------------S--------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------S-
-----------------------S--------------------------------------------------------
---------S-----------------------------------------S----------------------------
--------------------------------------------------------------------------------
--S----------------------------------------------S------------------------------
--------------S-----------------------------------------------------------SSSSSS
S------------------S--S---------------------------------------------------------
----------------------------------------------------S---------------------------
-S--------S-----------------------------------------S---------------------S-----
-------------------------------------------------------------S------------------
------------------------------S---------------------S-------------------S-------
---------------------------------------------------------------------------SSSSS
SSSSS---------------------------------------------------------------------------
---S----------------------------------------------------------------------------
-------------------------------S------------S-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--
>forward_31
-----------CCGATCAACAAAGAAGCCGC-------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--
>reverse_1165
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------TAGGAGAAGTAGCAGGCCCA----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--
>forward_211
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------CTAAAGGCGCCGGGGATTAG-----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--
>reverse_2047
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------ACACCAGGGATTTGGGCTG---------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--
>forward_256
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------CCAT
GTCAAAAAGGCCAGCT----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--
>reverse_2073
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------GCATGTTA
ATGCCCAAATGTTTGT----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--
>forward_2065
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------AACACCAGGGATTTGGGCTG---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--
>reverse_3582
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------TGCCATGTAATCCTGTGGA
CA------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--
