>input_sequence_38177
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---------------------------------ATGGCGATGGAGGGCTACGACCGCGAGTTCTGGCAGTTCGGCGACCA
GCTGCGCCTCCAGACGGCCACCTTCTCCGGCCTCTCCCTCGGCGACTCCATCTGGTCCCCCGCCGACAACACCGCCCCCC
GCGCCCGCAACGCCGACC------TCTTCTCCCCATCCCCGGCGCCCGACAACAACAGCG---CCGGGTTCGCCGCCGCC
AAGATGAACGGCA---GCCTCAACGGGCCCGGCCTCATCGGGTCCGGCAAGCTCGCCTTCGGCGCCACCACCACCAGCAA
GGCCGACCGCTACAACAACGTCAGCCT---------CGCCGA------CGCCAAGCCCTACGCCAACGCCAACGCCAACG
CCAACGGCATGTACGGTGCCAAGCCCAACAACACCAACATGAACAACGGCTTCGGGCTCAACAAGATGGCTGCCGGCGGC
GGGGGCTACGGCAACTTCAACAGCGGCAACGAGGGGGTGAAGAGCTACTTCAACAAGTCCATCGGCAGGCCGGCCAGCAA
C---AACAGCAGCAGCAACAACTTCAGCGGCTACGGCGGCAAGAAGGGCGCCGCGGACGGCAAGAAGAAGCACGCCAAGA
ACGAGCGAGGGGACAGCAACCACGGCGCCGCGTCGGAGAAGCGGTTCAAGACGCTGCCGGCGTCCGAGGCGCTCCCCCGG
AACGAGCCCATCGGAGGATACATCTTCGTCTGCAACAACGACACTATGGAGGAGAACCTCAAGAGGCAGCTCTTCGGTAA
CACTAAAGATTTTTCTCTTGAATTTTTCTTTTGACGTCCGATTAGATTAGTTGTACCTAATCCTCAACACAAAATCAAGG
AATCT--TCTACTAATTTT-----ATCAGATCTAGTGTAGTGACGGGTTGGTTACTTTGATTAATTTGCAGGGTTGCCAT
CCAGATACAGAGATTCAGTGAGGGCAATCAGGCCAGGGCTGCCCCTCTTCCTCTACAACTACTCCACCCACCAGCTCCAC
GGCATCTTCGAAGTAAAACTAATTCGAATAATCAAATTAATTTGCTATCTTGTTTGCAATTTGATGACA----AATTAGT
GTTTAATTGATTGAACTCATCGCCTTATACTGAATCTCATGCACAGGCTGCGAGCTTTGGCGGAGCGAACATCGACCCGG
CGGCGTGGGAGGACAAGAAGTGCAACGGCGAGTCCCGCTTCCCTGCACAGGTTTGTACCTACACCTTCACTCGCCATGGC
AGAGTGCCGCTAAGCTACT----------------------TATTAAGTTGATATTGTCAATATAATTCCACGAACAAAA
GTTGGCTAGAGAAATCTACTGCTGGCGAGCCAGTTGCAAGGCTGGCTTGAAGCGGAAGGAG-----ATCAGATCAGATCA
AGGACGAGCAAAAGCAATCAACCAATCGATTAGTTTATTTATTATTACACAGATGGATGTTGTTGTCTTGTTTAGTTGGA
ACCTAGTAGATCGTCGGCAT--AACTTTGCTAGTGACTGTCCAACAACCTCACCTCAGATTA----GGTTGGCCGGTCAA
TCCTAGGCCAACCACCTGTTCTTCTAGAACTAGCACACTTGTCAACACACGCTCGGTCGGTCGGTTCTTCTAGAGGGGGT
CTCAAACAAAGATCACTTTTTTAAAAGGGGCTCAAACATGATTGATTTT---------------TCGTTTTAGGG-----
--------------------------------------------------------------------------------
----------------------------------------------------------------------------ACTC
AAACAAGATCACTAGCTTAAAGTATTTGAAGTTATATACAGCTATTAGTATA------TACAGTAGGAAGAAAAATTAAA
AAGGAAAAAGGAAATGCTTGCACGAATCTTCACGTAAAATCAATGACATATGACTTAGATGTACCATACTTGATGCCTTA
AATTAACAACACTGAAT----CTTCTACTGGTCTTTTGCATCTAAACAAAATTAAGGATGAACAATCCTAACTTGGAGTA
CT-------GTGCTTAAACTCTCTGTATGTCTTGCTAATTACAATTTGCGACGATGGATGAATTCAGGTGAGGGTGGCCA
CAAGGAAGATCTGCGACCCGCTGGAGGAGGACGCCTTCCGCCCGATCCTGCACCACTACGACGGGCCCAAGTTCCGGCTG
GAGCTCAGCATCACCGAGGCCCTCTCCCTTCTCGATATATTTGAAGACAAGGACGAGGCCTGA-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------
>chr5B_1_TraesCS5B01G482400
GTGACCTAAACGCTTTTATATTGAGTACTCCCTCCGTCCCAAAAAACTTGTCGAAGAAATAGATAAAATTGGATGTATCT
ATAACTAAAATACATCTAGATTCATCCATTCCTTTGACAAGTATTTTCGGACGGAGGGAGTACAAGCTAAGCTGCATGTC
TCAGTTGAGTGCAAGTGCATGCCCTTTGTTTTCTGAACAAATGATGGGCCTCGCATGGAAAAGCCTGATTAAGCTATAAA
GTAAACTGCTGAAGCTCTGTTGTAATATTCAGGAGCGGTCATGAGGGCAGCAGCGACCGACTCAGAAAAGTTCATGACTA
AAATGTGAGCCCCCTTTCTCGCAAAAAATAAAATAAATTTTTTTTGAGCCCCTTGTCGTGTTCACCGTAAAGTTGAGGAG
AAAATCAGTA----AAAAGGCCGGAGGGGTGAGAAATTCGGTGTGAAAGTTGGCACGAGAGCGAGAGTAGAAGCAAAGCC
ATCCCATCCCATGTTCTAGAAGATCACTTTATTTTTTCAGAAAGAAAAAGAAAGGTAAACTGGAGCCCGCGAGTCAAAAA
AAGCCGCGTGGCCGGGCCGGGCCGGGGCCTCCACGTCTCCTCCCACACCGCCCTCC------------------------
------------------GATGAATCCCCGGACGCGGTTTGCGCGCCTTCCGCGAAGCTTCCCCCGACGACACGGCCACG
TCCGAGCGCCTGCGTGACCCACCGGACACGGCGACAGTTGACAAGATCACAGGAGAGCGAGCAGACGACGACTAGGTAGT
AAGTACGGTCCAATCCAAGCTACTCCCGAGCCGATTCGCACTCGTTTTCTCATACTTCCACTGGAAGCAA----TCCAAC
CGC----GCCACCCCACCAACCAACCACACCGCACCTTGTCTGGCCCATA-----------ATAAAAGCAGCCCCTCCGC
CCCCGCCCACGGCCTCC---ATTTTCCATTCCCATCCCGCAACGCACGCAGCTCGCTCGACCAGAACACCTCGGAGCAGC
AGCAGCGGCGGCCGGCGGAGACCGTGT-----CATGGCGATGGAGGGCTACGACCGCGAGTTCTGGCAGTTCGGCGACCA
GCTGCGCCTCCAGACGGCCACCTTCTCCGGCCTCTCCCTCGGCGACTCCATCTGGTCCCCCGCCGACAACACCGCCCCCC
GCGCCCGCAACGCCGACC------TCTTCTCCCCATCCCCGGCGCCCGACAACAACAGCG---CCGGGTTCGCCGCCGCC
AAGATGAACGGCA---GCCTCAACGGGCCCGGCCTCATCGGGTCCGGCAAGCTCGCCTTCGGCGCCACCACCACCAGCAA
GGCCGACCGCTACAACAACGTCAGCCT---------CGCCGA------CGCCAAGCCCTACGCCAACGCCAACGCCAACG
CCAACGGCATGTACGGTGCCAAGCCCAACAACACCAACATGAACAACGGCTTCGGGCTCAACAAGATGGCTGCCGGCGGC
GGGGGCTACGGCAACTTCAACAGCGGCAACGAGGGGGTGAAGAGCTACTTCAACAAGTCCATCGGCAGGCCGGCCAGCAA
C---AACAGCAGCAGCAACAACTTCAGCGGCTACGGCGGCAAGAAGGGCGCCGCGGACGGCAAGAAGAAGCACGCCAAGA
ACGAGCGAGGGGACAGCAACCACGGCGCCGCGTCGGAGAAGCGGTTCAAGACGCTGCCGGCGTCCGAGGCGCTCCCCCGG
AACGAGCCCATCGGAGGATACATCTTCGTCTGCAACAACGACACTATGGAGGAGAACCTCAAGAGGCAGCTCTTCGGTAA
CACTAAAGATTTTTCTCTTGAATTTTTCTTTTGACGTCCGATTAGATTAGTTGTACCTAATCCTCAACACAAAATCAAGG
AATCT--TCTACTAATTTT-----ATCAGATCTAGTGTAGTGACGGGTTGGTTACTTTGATTAATTTGCAGGGTTGCCAT
CCAGATACAGAGATTCAGTGAGGGCAATCAGGCCAGGGCTGCCCCTCTTCCTCTACAACTACTCCACCCACCAGCTCCAC
GGCATCTTCGAAGTAAAACTAATTCGAATAATCAAATTAATTTGCTATCTTGTTTGCAATTTGATGACA----AATTAGT
GTTTAATTGATTGAACTCATCGCCTTATACTGAATCTCATGCACAGGCTGCGAGCTTTGGCGGAGCGAACATCGACCCGG
CGGCGTGGGAGGACAAGAAGTGCAACGGCGAGTCCCGCTTCCCTGCACAGGTTTGTACCTACACCTTCACTCGCCATGGC
AGAGTGCCGCTAAGCTACT----------------------TATTAAGTTGATATTGTCAATATAATTCCACGAACAAAA
GTTGGCTAGAGAAATCTACTGCTGGCGAGCCAGTTGCAAGGCTGGCTTGAAGCGGAAGGAG-----ATCAGATCAGATCA
AGGACGAGCAAAAGCAATCAACCAATCGATTAGTTTATTTATTATTACACAGATGGATGTTGTTGTCTTGTTTAGTTGGA
ACCTAGTAGATCGTCGGCAT--AACTTTGCTAGTGACTGTCCAACAACCTCACCTCAGATTA----GGTTGGCCGGTCAA
TCCTAGGCCAACCACCTGTTCTTCTAGAACTAGCACACTTGTCAACACACGCTCGGTCGGTCGGTTCTTCTAGAGGGGGT
CTCAAACAAAGATCACTTTTTTAAAAGGGGCTCAAACATGATTGATTTT---------------TCGTTTTAGGG-----
--------------------------------------------------------------------------------
----------------------------------------------------------------------------ACTC
AAACAAGATCACTAGCTTAAAGTATTTGAAGTTATATACAGCTATTAGTATA------TACAGTAGGAAGAAAAATTAAA
AAGGAAAAAGGAAATGCTTGCACGAATCTTCACGTAAAATCAATGACATATGACTTAGATGTACCATACTTGATGCCTTA
AATTAACAACACTGAAT----CTTCTACTGGTCTTTTGCATCTAAACAAAATTAAGGATGAACAATCCTAACTTGGAGTA
CT-------GTGCTTAAACTCTCTGTATGTCTTGCTAATTACAATTTGCGACGATGGATGAATTCAGGTGAGGGTGGCCA
CAAGGAAGATCTGCGACCCGCTGGAGGAGGACGCCTTCCGCCCGATCCTGCACCACTACGACGGGCCCAAGTTCCGGCTG
GAGCTCAGCATCACCGAGGCCCTCTCCCTTCTCGATATATTTGAAGACAAGGACGAGGCCTGATCGAG---GCTGCATGC
CTACTGCTGATCAGGGAGGGACTGTTGAGGAAGGAACAACGCAATAAGATCG-ATCGGAGCATATATATATACATACATA
CATACGATTAATATCATTATCAATT-----AATGGTGATATATACATACGTGAGTTTTATGTATTGGGTTTTCCATCCCG
CGGGCTATGAAATTATGCGCCCCCCGCTGTCTATCATGCATGCGTGGTGATGGCTGCACAAGATGAGCCCTCGTGGACAT
AACTAATCTATTGTCACGGCTTTGTAT------------GTATGTATAATATTGAGACTTTAAGATGTTTCTCCTGTTGT
GTACCTTAGCAGAATAAATCATCCTTTTT---ACTGAATTTGTTGATAGATTGGAAATTTGGAAAACCGAGCAATGCTTA
GTGAGCTAGTGTGGTGCATCTGCACCTTGCCCGCCGGGTTCAGCCTCAGCTTCCCCTCCGGGAAGCTCCTCGTTGAGTCC
AATAGAGCGCGCACAGGGGACCCTTACTCGGCTGGCCTGATGACAGGAACCGAAGCATAGCGCGTAAAAATACAATATGG
AGTGGAATGGTGAGGAGTCGAAATACATGTGCCATTAGTTACTGGAATAGTCAGTGATAGATAGGTAGCGTGAGTGTTCA
AGAACTTCCTGCACTAACAGGTTTGAAACCATTTTTTTTTCAACATTTACTGAAATTTGTGAGCATTTAAAAATGGCAAA
TGTTATTAAAATCACAAATATTCATTTGAATTCCAAAGAGTTTTTAATAAATGTGAACATTTCTTATAATTCAGTTTTTC
TGAAAAACAGTGGACAATTTTGTAATCCTGAAATTTTTTTAATCTGTAATAAATTTTGAAAAAAATAACATTTTTTGAAA
TTCCATTCAGAATTTGAATTCACGGGCATTTTTTAAATCCACACGCAGATTTTCTAAAATTCTGATTAAAATTTGAGAAC
TCAAACTTTTTTCACAGAAACATGTGAATATTTTTTATGAAAACTTA
>chr5A_372
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------CTTATCGTGTTCATCGTAAAGCTTAGTAC
GGTAATAAAATCAGAAAAGGCGGGAGCAGTGAGAAATTTGGTGTGAAAGTTGGGACGAGAGCGAGAGTAGAAGCAAAGCC
ATCCCAT-----GTTCTAGAAGATAACTTTGTTTTTTCAGAAAAAGAAAAGA----TAACTGGAGCA-GCGAGTCAAAAA
AAGCCGCGTGGGCGGGCCGGGCCGGGGCCTCCACGTCTCCTCCCATCCCACCGAAACATTGAATCCCCATGCGGTCGCCC
TCATCACGGCCCTCAAC-----AATCCCCGGACGCGGTTTGCGCGCCTTCCGCGAAGCTTCCCCCGACGACACGGCCACG
TCCCA----CTGCGTGACCCACCGGACACGGCGACCATTGACAAGATCAC-----AGCA-------GACGACTAGGCACG
GTC--AGC--------------------------------------------TACTTCCACTGGAAGCAAGCAATCCAAC
CGC----GCCACCCCACCAACCAACCACACCGCACCTTGTCTGTCCGC----------CCGATAAAAGTAGCCCCTCCG-
CCCCGCCCACGGCCTCCTCCATTTTCC-TCTCCACCCCGCAACCCACGCAGACGCAGCTCGACCGACCACAACTGTGCGC
AGCAGCGGCGGCCGGCGGAGACCGTATCGTACCATGGCGATGGAGGGCTACGACCGCGAGTTCTGGCAGTTCGGCGACCA
GCTCCGCCTCCAGACGGCCACCTTCTCCGGCCTCTCCCTCGGCGACTCCATCTGGTCCCCCGCCGACG---CCGCCCCCC
GCGCCCGCAACGCCGACCCCGGCCTCTTCTCCCCCTCCCAGGCGGCCCACAACAACGCCGGAACCGGATTCGCCGCCGCC
AAGATGAACGGCA---GCCTCAACGGGCCCGGCCTCATCGGCTCCGGCAAGCTCGCCTTCGGCGCCACCACCACCAGCAA
GGCCGACCGCTACAACAACGTCAGCCTCCCCGCCGCCGCCGA------CGCCAAGCCCTACGCCAACGCCAACGGCC---
---------TGTACGGTGCCAAGCCCAACAACACCAAT---AACAACGGCTTCGGGCTCAACAAGATGGCTGCCGGCGGC
GGGGGCTACAGCAACTTCAACGGCGGCAACGAGGGGGTGAAGAGCTACTTCAACAAGTCCATCGGGAGGCCGGCCAGCAA
CAACAACAGCAGCAGCAACAACTTCAGCGGCTACGGCGGCAAGAAGGGCGCCGCGGACGGCAAGAAGAAGCACGCCAAGA
ACGAGCGAGGGGACAACAACCACGGCGCCGCGTCGGAGAAGCGGTTCAAGACGCTGCCGGCGTCCGAGGCGCTGCCCCGG
AACGAGCCCATCGGCGGCTACATCTTCGTCTGCAACAACGACACCATGGAGGAGAACCTCAAGAGGCAGCTCTTCGGTAC
GC---AAGATTTTTCTCTTCAATTTTTCTTTTGGCGTCCGATTAGATTAGTTGTATCTAATCCTCAAGATCAAATCAAGC
CA--TCTTCAACTAATTTGATCAGATCAGATCTAGTCTAGTGACGGTTTGGTTACTTTGAT----TTGCAGGGTTGCCAT
CCAGATACAGAGATTCAGTGAGGGCGATCAGGCCAGGGCTGCCCCTCTTCCTCTACAACTACTCCACCCACCAGCTCCAC
GGCATCTTCGAGGTAAAATTAGTTACAATAATCAAATTAATTTGCTATCTTGTTTGCAATTTGATCACAAATTAATTAAT
GTTGAATTGATTGAATCG-------------------CATGCACAGGCTGCGAGCTTTGGCGGAGCGAACATCGACCCGG
CGGCCTGGGAGGACAAGAAGTGCAACGGCGAGTCTCGCTTCCCTGCACAGGTAA----------CTTCACTCGCCATGGC
ATCCGTGTCAAAAACGTTCTTATACTATGCGACAGAGGGGGTATTAAGTTGATAT---CAATATAATTCTACGAACATAA
GTTG-CTAGAGATATGAA---CTGGCGAGGCAGTTGCAAGGCTAGCTTGATCCGGAAGGAGATG----------AGATCA
ATGACTAGTAAAAGCAATCGATCAATTAGTTTTATCTTTA--TATTGAACAGATGGATGTTGTTGTCTTGTTTAGTTGGA
ACCTAGTAGATCGTCGGCATAAAACTTTGCTAGTGACTGTCCAACAACCTCACCTCGATTAGGTTTGGTTGGCCGGTCAA
TCCTAGGCCAACCACCTGTTCTTCTAGAACTAGCACACTTGCCAACACACTCTCGGTTCTTCTA------TAGAGGGGGA
CTCAAACAAGATCAC--TTTTTTTAAGGGACTCAAACATGATTACTTTAAGGATTGGCCCATCATCGCTTTAGGTGCTAA
TGTAACTCTACATGTTCCTTTGTATTCCGTCTTTTATTTTGTTCGTGCGAGGGGACTTTGTTCGGCTGTGTGCATCTTAC
TTATGCAGAGGTCAGCTTAAACCTTTTAAGTAATATGAATCGCCCCTTTTCGAAAGCATGGTTACTTTTTTTAGGAACTC
AAACAAGATCACTAGCTTGAAGTGTTTGAAGTTAATGCTGGTACTAAAAAACAAAC------------------------
------------------------------------------------------------------------ATGCCTTA
AATTAACAACACCGAATTAATCTTGCACTGGCATTTTGCGTGTAAACAAAATTAAGGATGATCAATCCTAACTTGGAGTA
CTACTGTATGTACTTAATCTCTCTGTATGTCTTGCTAATTACAATTTGCAACGATCGATGAATTCAGGTGAGGGTGGCCA
CAAGGAAGATCTGCGACCCACTGGAGGAGGACGCCTTCCGCCCTATCCTGCACCACTACGACGGGCCCAAGTTCCGGCTG
GAGCTCAGCATCACCGAGGCTCTCTCCCTTCTTGATATATTTGAAGACAAGGACGATGCCTGATCGAG---GGCTGATC-
----------------AGGGATTCTTGAGGAAGGAATAGCACAATAAGATCGGATCGGAGAATATATA--------CATA
CATATGATTAATATCATTATCAATT-----AATGGTGATAT----ATACGTGAGTTTTATGTATTGGGTTTTCCATCTCG
CGGGCTATGAAATTATGCGTCCCCCGTTGTGGTAT---CATGCGTGGTGATGGCTGCACAAGATGAGCCCTCGTGAACAT
AACTAATCTATTGTCACGGCT----AT------------GTATGTATAATATTGAGACTTTAAGATGTTTCTCCTGTTGT
GTACCTTAGCAGAATAAATCATCTTTTTTTTAACTGAATTTATTGA----------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------
>chr5D_461
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------GAGTAGAAGCAAAGCT
ATCCCAT-----GTTCTAGAAGATAACCCGGATTCA----AAAAAGAAAGGAAAGTTAACTGGAGCA-GCGAGTCAAAAA
AAGCCGCGTGGGCGGGC-----CGGGGCCTCCACGTCTCCTCCCATCCCACCGAAACATTGAATCCCC-----GTCGCCC
TCATCGCGGCCCCGATGGGATGAATCGCCGGACGCGGTTTGCGCGCCTTCCGCGAAGCTTCCCCCGACGACACGGCCACG
TCCGAGTGCCTGCGTGACCCACCGGACACGGCGACAATTGACAACATCACAGGAGAGCA-------GACGACTAGGTCCA
GTCGAAGC--------------------------------------------TACTTCCAGTGGAAGCAA----TCCAAC
TTGATCGGCCACCCCACCAACCAACCAGATCGCACCCAGCACCGCCAGTCTCCCGCGGCCGATAAAAGTAGCCCCTCCG-
CCCCGCCCACGGCCTCC---ATTTTCC-TTTCCATCCCGCAACCCACGCAGCTCGACT-------------------CGC
AGCAGCAGCAGCCGGCGGAGATCGTAT-----CATGGCGATGGAGGGCTACGACCGCGAGTTCTGGCAGTTCGGCGACCA
GCTGCGGCTCCAGACGGCCAGCTTCTCCGGCCTCTCCCTCGGCGACTCCATCTGGTCCCCCGCCGACG---CCGCCCCCC
GCGCCCGCAACGCCGACC------TCTTCTCCCCCTCCCCGGCGCCCGACAACAACAA---------------CGCCGCC
AAGATGAACGGCAACGGCCTCAACGGGCCCGGCCTCATCGGGTCCGGCAAGCTCGCCTTCGGCGCCACCACCACCAGCAA
GGCCGACCGCTACAACAACGTCAGCCTCCCCGCCGCCGCCGACGCCAACGCCAAGCCCTACGGCAACGCCAACGGCC---
---------TATACGGTGCCAAGCCCAACAACGCCACC---AACAACGGCTTCGGGCTCAACAAGATGGCTGCCGGCGGC
GGGGGCTACGGCAACTTCAACGGCGGCAACGACGGGGTGAAGAGCTACTTCAACAAGTCCATCGGCAGGCCGGCCAGCAA
CAACAGCAGCAA---CAACAACTTCAGCGGCTACGGCGGCAAGAAGGGCGCTGCCGACGGCAAGAAGAAGCACGCCAAGA
ACGAGCGAGGGGACAACAACCATGGCGCGGCCTCGGAGAAGCGGTTCAAGACGCTGCCGGCGTCCGAGGCGCTGCCCCGG
AACGAGCCCATCGGCGGCTACATCTTCGTCTGCAACAACGACACCATGGAGGAGAACCTCAAGAGGCAGCTCTTCGGTAT
GC---AAGATTTTTCTCTTTAATTTTTCTTTTAACTTCTGATTAAATTAGTTATACCTGATCCTCAGGAGAAAATCAAGT
CATCTCTTAAACTAATTTAATCAGCTCAGATCTAGTGACGA-ACGGTTTGGTTGCTTTGAT----TTGCAGGGTTGCCAT
CCAGATACAGAGATTCAGTGAGGGCGATCAGGCCGGGGCTGCCCCTCTTCCTCTACAACTACTCCACCCATCAGCTCCAC
GGCATCTTCGAGGTAAAATTAATCAGAATGATCAAATTAATTTGCTCTCTTGTTTGCAATTTGATGACAA----ATAAGT
TTTGAATTGACTGAATCG-------------------CATGCACAGGCTGCGAGCTTTGGCGGAGCGAACATCGACCCGG
CGGCGTGGGAGGACAAGAAGTGCAACGGCGAGTCTCGCTTCCCTGCACAGGTTTGTACCTTCACCTTCACTCGCCATGGC
AGAGCGCTGCTAAGCTACT----------------------TATTAAGTTGATAT---CAATATAATTCTACGAACACAA
GTTAGCTAGAGATATCTACTACTGGCGAGCCAATTGCAAGGCTAGCTTGAACCGGAAGGAGATCAGATCAGATCAGATCA
ATGACGAGTAAAAGCAAGCAATCAATTAGTTTATATT-----TATTGAACGGATGGATGTTGTTGTCTTGTTTAGTTGGA
ACCTAGTAGATCGTGGGCATAACTTTTTGCTAGTGACTGTCCAACAACCTCACCTCAGATTA----GGCTGGCCGGTCAA
TCCTAGGCCAACCACCTGTTCTTCTAGAACAAGCACACTTGTCAACGCACGCTCGGTCGGT----TCTTCTAGAGGGTGA
CTCAAACAAGATCAC--TTTTTTTAATGGGCTCAAACATGATTACTTTT---------------TCGCTTTAGGG-----
--------------------------------------------------------------------------------
----------------------------------------------------------------------------ACCC
AAACAAGATCACTAGCTTAAAGTATCTGAAGTTACAATGCACATCTAAGTGACTCAGTTAAACTAGGAAGAAAAAG--AA
AAAGAAAAAGGAAATGTTTGCACGATTCTTCACGTAAAATCAATGACATATGACTTAGATGTACAATACTTAATGCCTTA
AATTAACAACACCGAAT----CTTCTACTGGTCTTTTGCATCTAAACAAATTTAGGGATGAACAATCCTAACTTGGAGTA
C-------TGTACTTAATCTTTCTGTATGTCTTGCTAATTA--ATTTGCGACGGTCGATGAATTCAGGTGCGGGTGGCTA
CAAGGAAGATCTGCGACCCGCTGGAGGAGGACGCCTTCCGCCCGATCCTGCACCACTACGACGGGCCCAAGTTCCGGCTG
GAGCTCAGCATCACCGAGGCTCTCTCCCTTCTCGATATATTTGAAGACAAGGACGATTGAGGCTGCCTACTGCTGCATGC
TCAATGCTGATCAGGGAGGGACTGTTGAGGAAGGAACAGCGCAATAAGATCG-ATCGGAGCATATATA--------CATA
CATACGATTAATATCATTATCAATTAATGCAATGGTGATAT----ATACGTGAGTTTTATGTATTGGGTTTTCCATCTCG
CGGGCTATGAA-TTATGCGCCCCCCGTTGTCGTAT---CATGCGTGGTGATGGCTGCACAAGATGAGCCCTCGTGAACAT
TACTAATCTATTGTCACGGCT----ATGTATGTATGTATGTATGTATAATACTGAGACTTTAAGATGTTTCTCCTGTTGT
GTACCTTAGCAGAATAAATCATCCTTTTT---ACTGAATTTGTTGATAGATTGGAAATTTCGAAAACCGAGCAATGCTTG
GTGAGCTAGTGTGGTGCATCTGCACCTCGCCCGCCGGGTTCA--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---S---------S-------S-S--S-S
SSS-SS-SS------------S----SS----------S--------------S--------------------------
-------SSSSS------------S-----S------------S-S----S--S--S---------SS------------
-----------S---------------------------------SS--S--SSSS------------------------
--------------------------------------------------------------------------------
------S-----------------------------S---------------------SSSSSSSS------------SS
SSSS-S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------------------------
----------------------------------------------SS-S------------------S----------S
---------------------------S--S------------S-----------SS-SSSSSSS--SS-SSSSSSSS--
-------------------------S------------------------------------------------------
-------------------------------------------------------------------SSSS---------
----------------------------------S----------------------S---------S------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------S-SSSS
SSSSSSSSS-----------------------------SSS---------------------------------------
---------------------S----------------------------------------------------------
--------------------------------------------------------------------------------
---------------S---------------------------------------------------------S------
--------------S--S--------------------------S----------------------------------S
SSSSS--------------S-----------------------------------------------S-S---------S
S--------S--------S---------------------------S--------------SSSS---------------
-------------------------S------------------------------------------------------
-----------S------S-----S-------------------------------------------------------
---S-----------SSSSSSSSSSSSSSSSSSSSSS-------------------------------------------
----------------------------------S-------------------------S-------------------
----S--S-----------------------------------------------SSS-----------S-------S--
------------S-------S----------------------S-------S----------------------------
-S------S------------S----SSS--SS---S--SSS----SS--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------SSS--------------S
---------SSSSSSSS-----SS-------------------SS----------------------S------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------S-SSSS--SS---SS-S---------S-S------------SSS--
--S-------------S--------S--------------------------------------S------S--------
------------S-------------------------------------------------------------------
-----------S-----S-------------------------------------S------------------------
--------------------------------------------------------------------------------
--------------------S-----------------------------------S-----------------------
SS-S----------------------------------S-----------------------------SSSSSSSS----
-----------------------------------------SSSS--------------------------------S--
--------------------------S----SSSSSSS-------------------------------------S----
---------------------SSSS-------------------------------------------------------
------------------------------------------------------------S------------------S
---------------------------S--------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_217
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------CAAATGATGGGCCTCGCATG-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------
>reverse_2301
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------ACACCTTCACTCGCCATGG-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------
>forward_341
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-AATGTGAGCCCCCTTTCTCG-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------
>reverse_2444
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------GGCTTGAAGCGGAAGGAGAT-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------
>forward_1843
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------AGGCAGCTCTTCGGTAA
CAC-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------
>reverse_3900
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------GGGAAGCTCCTCGTTGAGTC-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------
