>input_sequence_38158
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---------ATGGGCGCCGCCTACTACCTCAGGTGCTTTGGATTTGGCGGGTGCGTGCACCCTCACCCTGCCGCGGCGGC
AAACCGCCAAGGTACGTGCATACGTAAGTACGTAGGCATGTTGTGCAACAACTAATACGTACCAC---------------
--------------------------------------------------------------------------------
-TGTACTACTTACGTGCATCGATCCTGTGCTAATTAATTGTTCTCGTTAGCTAGTGTATATGTACGTGTACTGTCTCTC-
--TGTTCTGCATATGGTTTCACCACTCAAATTTGAGCTTTGAACTAGTATA-----------------------TATGGA
AAGAACAAGAATATAT-------ACTTGCTACGTATAGTTGGCCACTAAGCACTAGTAGTAGTAACTTCATTTTTCTCCA
AGGGAAGACACTCACTGGCTACTAGCTAGCGAGAGCTAGCTAGCTAGGACCGCTTGCCCTAGCTACCCTACCTATATGTG
GGAGCAGCTAGCAAGCGACCGAACACAAACGTTCGGTCGGACTCGGGCCGGAGGAGGAGCCAGCCGGCCTGTTGTACTAT
GTGCCGGGTGCGAAAGCCAGCCGCGGTAGCGTACGGCGGCGCGTGCATGCATGCGTGCCGGAGCACGGCAGACATCTCCA
CCAAGCAACCAAACCGTCTT---TGGCGTCGCCTCGCTTCGACACATAGAT----------GCCCAATCATCATTACCAC
CACTATCCCCGTTCATTAGCCCGCCGACTTAACCAGCTAGCCGGTTAGCCACACGTATATAGACCGTTCGCAT-------
-----ATCTCCATTCACGAAAGAAGAATTCAACCTGCTTGTTCATTAATTCGCCGGCCGGCACCCGG-------AGAGAT
GGCCGTCGGTGGCATGATGTTCAGGTGTTTCGGC------CCGTGCATGCGGCGGCCTCACCAGCGAGGTAG--------
-ACGGCCGCCCTCAGAGCTCGCGCGCTCACCA-------------CGCCCTAGCCGCATGCATCCATCGTGCACGTCCTC
ATTTC-------CATCCGGTTCTCGTATGTCTACTAATCCTTTCGTTTGTTGGTGATGGCATGCAGGAGCTCGCCACCAT
GACCCCAAGAAGACGACGAGCCAGCTGCAGAGCACGGCGTCGTCGGCGTCGTCG------TCGTCGGGGCTGGACTTCCG
GGAGGAGTACACCAGCGCGTTCCGCACCGAGTCATACAACGACTTCTGGGCGCGGGTGCTCGACATCACGCTCGCCCACG
GCGCCGCCCTCGTGCCCAGGCCCGCCTCCGCCGCCAGCGCCGCGTCCAAGCGCCTCTCCTCCTACCGCGTCTTCGCCGAG
CACCTGCTCGACCCCGACCAGGCCGCCGCCGCCGCCGCGCTCGCGTCCGCGCGCAACCGCCCAGACGTCCACGGCCTCCT
CTCCGCCTACTACGACGAGACGGCCGGCGCCTCCTTCCTCTGCAGCCACCTGCTCAAGGACATCGAGCAGATCCGCCTGC
GCTACCGCCCGCTCAAGGCCGCGCTCCGCGGCAGGCTCGTCCCCGGCGGGAGCCTCGCCGACGTCTCCGCCGCGCTCGGG
AAGCCATTCACCGCCCTGGCGGCCACGCAGGGCAGGCTCGGGGACGCGCGGCTCAGCTCCGCGGACCTCCTCAAGGGCCT
CGACTCCGGCAGGAAGGCCGCGCGCCGCAGGATCAGGACGCTCGCCCGGCTCAGGCAGGCGCTCTCGGTGTCCTTCGTCA
CGGTCGTCGCCGTCGTGGCCGTCGTCGGCGCGTGCGTCGGCGTGCACGTCCTTGCGGCGTTCGCGGCGTTCCCGATGATG
TCGCCGGCGTGGCTGGG---------------------------------------------------------------
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---------------------------------------------------------------------GCTCTTCAGCG
GCCGGGGGGCGCGCCGCGCGCTGGTGCAGCTGGAGGCCGCGGCCAAGGGCACGTACATCCTCAACCGGGACATGGACACC
ATCAGCAGGCTGGTTGAGCGGGTGCGCGACGAGGGGGAGTACATGCTCGCGCTGCTGCAGCTCTGCGTGGCGGAGGAGGC
CGCCGCCGGCGCCGGCGCCGGGAAGGGGAGGCTGGTGCGGGAGGTGCTCAGGCAGCTGTGCAAGAACGAGGAGAGCTTCA
GGCAGCAGCTGGACGAGCTGGAGGAGCACCTCTTCCTCTGCTTCATGACCATCAACAAGGCCAGGAGCATGGTCATCAAG
TTCATGGCCACCGCCGCGAGCCGGT----GA-------------------------------------------------
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---
>chr4D_1_TraesCS4D01G311800
AGAAGGAAGGAGCTCGTTGGCAGGCTACCCCACCATCTATCTTAGAGTGAGGGGTGGGGTGCGCGTGGACGGCTTTTGGG
TTTGTGATGTGTTCTCGTACATTTGGACTTAAACAGACACACGCGGATAATTTGGATCGTCGCGTTGGAATTGCTCG---
-------------------------TGCAGGCGCAGCCATATCCG----CTGCCGATCGACGAGGTGGTCGCCGGTACGC
AGGTACTCCA---CACACACGTAGCGTCGGCGGCCGGAGGGAAAGGA-------GGTCGGTCGTTCCAAGCTAGGCCCGC
GCCACCTTTCCCGAACTCACGAGGACAGACGCAATCCAATTCCAATCCCATCCACCCCCAGGTTCCGCGCCGCCACCCAC
GCTGGAT-----------CCCATCATGGAACCGGCGGGCCCCACGTCGCGTTCCTGGCTCGCCACGTCCGACCATGCGCG
AAAGCAACGGAG---------ATGGATAGATGCTGGCCCCGCCGGGGGCGCCGCGCTGCGGTGCGTCCAGGCCGCATCCG
AAGGGCCTCGGCAGCCCCTGGAAAACCAAAGCAACGATAACGATGGCTTCTC----------------------------
----GATTCGTTTTGCCTTTGAGTGGTTGCCAACCTCGATCGGCCGGTCTTGGGCATGCTTCCAAGCTTCGTCGTCGTCC
TCCAACTAGCTCCAACCGATGATTGGATTTGCAAGGAAGACGGGTGACTTGCCTTTCTGCCCA----AGCTACGATCCAC
TGCACCAC------AGACACGGCGGTATCTTAACGGCCGGAGGCAGACAGA-GACATGCTTTATAAGCTAGCC-------
-----TCTGCTTCTGCTTGTCCCGATCCATCCATCCATCACGCATCACAGCCTCATTCTTTCACTTGGACGGGAAGAGAC
ACGTAGGTACACTACACACCCTCCACCCTAGCCCTAGCTAGCTACCCCGATCAAAGGAGCATACATACATAACTCCGCCC
GTTGTATATACGTACGCGCACA--------CACGTACTGGAGTAGCTAGCATCGGCGAAACAGTGCA----CTGATTGGG
TTTTCATCCATGGGCGCCGCCTACTACCTCAGGTGCTTTGGATTTGGCGGGTGCGTGCACCCTCACCCTGCCGCGGCGGC
AAACCGCCAAGGTACGTGCATACGTAAGTACGTAGGCATGTTGTGCAACAACTAATACGTACCAC---------------
--------------------------------------------------------------------------------
-TGTACTACTTACGTGCATCGATCCTGTGCTAATTAATTGTTCTCGTTAGCTAGTGTATATGTACGTGTACTGTCTCTC-
--TGTTCTGCATATGGTTTCACCACTCAAATTTGAGCTTTGAACTAGTATA-----------------------TATGGA
AAGAACAAGAATATAT-------ACTTGCTACGTATAGTTGGCCACTAAGCACTAGTAGTAGTAACTTCATTTTTCTCCA
AGGGAAGACACTCACTGGCTACTAGCTAGCGAGAGCTAGCTAGCTAGGACCGCTTGCCCTAGCTACCCTACCTATATGTG
GGAGCAGCTAGCAAGCGACCGAACACAAACGTTCGGTCGGACTCGGGCCGGAGGAGGAGCCAGCCGGCCTGTTGTACTAT
GTGCCGGGTGCGAAAGCCAGCCGCGGTAGCGTACGGCGGCGCGTGCATGCATGCGTGCCGGAGCACGGCAGACATCTCCA
CCAAGCAACCAAACCGTCTT---TGGCGTCGCCTCGCTTCGACACATAGAT----------GCCCAATCATCATTACCAC
CACTATCCCCGTTCATTAGCCCGCCGACTTAACCAGCTAGCCGGTTAGCCACACGTATATAGACCGTTCGCAT-------
-----ATCTCCATTCACGAAAGAAGAATTCAACCTGCTTGTTCATTAATTCGCCGGCCGGCACCCGG-------AGAGAT
GGCCGTCGGTGGCATGATGTTCAGGTGTTTCGGC------CCGTGCATGCGGCGGCCTCACCAGCGAGGTAG--------
-ACGGCCGCCCTCAGAGCTCGCGCGCTCACCA-------------CGCCCTAGCCGCATGCATCCATCGTGCACGTCCTC
ATTTC-------CATCCGGTTCTCGTATGTCTACTAATCCTTTCGTTTGTTGGTGATGGCATGCAGGAGCTCGCCACCAT
GACCCCAAGAAGACGACGAGCCAGCTGCAGAGCACGGCGTCGTCGGCGTCGTCG------TCGTCGGGGCTGGACTTCCG
GGAGGAGTACACCAGCGCGTTCCGCACCGAGTCATACAACGACTTCTGGGCGCGGGTGCTCGACATCACGCTCGCCCACG
GCGCCGCCCTCGTGCCCAGGCCCGCCTCCGCCGCCAGCGCCGCGTCCAAGCGCCTCTCCTCCTACCGCGTCTTCGCCGAG
CACCTGCTCGACCCCGACCAGGCCGCCGCCGCCGCCGCGCTCGCGTCCGCGCGCAACCGCCCAGACGTCCACGGCCTCCT
CTCCGCCTACTACGACGAGACGGCCGGCGCCTCCTTCCTCTGCAGCCACCTGCTCAAGGACATCGAGCAGATCCGCCTGC
GCTACCGCCCGCTCAAGGCCGCGCTCCGCGGCAGGCTCGTCCCCGGCGGGAGCCTCGCCGACGTCTCCGCCGCGCTCGGG
AAGCCATTCACCGCCCTGGCGGCCACGCAGGGCAGGCTCGGGGACGCGCGGCTCAGCTCCGCGGACCTCCTCAAGGGCCT
CGACTCCGGCAGGAAGGCCGCGCGCCGCAGGATCAGGACGCTCGCCCGGCTCAGGCAGGCGCTCTCGGTGTCCTTCGTCA
CGGTCGTCGCCGTCGTGGCCGTCGTCGGCGCGTGCGTCGGCGTGCACGTCCTTGCGGCGTTCGCGGCGTTCCCGATGATG
TCGCCGGCGTGGCTGGG---------------------------------------------------------------
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---------------------------------------------------------------------GCTCTTCAGCG
GCCGGGGGGCGCGCCGCGCGCTGGTGCAGCTGGAGGCCGCGGCCAAGGGCACGTACATCCTCAACCGGGACATGGACACC
ATCAGCAGGCTGGTTGAGCGGGTGCGCGACGAGGGGGAGTACATGCTCGCGCTGCTGCAGCTCTGCGTGGCGGAGGAGGC
CGCCGCCGGCGCCGGCGCCGGGAAGGGGAGGCTGGTGCGGGAGGTGCTCAGGCAGCTGTGCAAGAACGAGGAGAGCTTCA
GGCAGCAGCTGGACGAGCTGGAGGAGCACCTCTTCCTCTGCTTCATGACCATCAACAAGGCCAGGAGCATGGTCATCAAG
TTCATGGCCACCGCCGCGAGCCGGT----GATCACTGATCAGCACGGCATACTACAAACTGTACATAATAGCA-------
-----TTCTTTCTTTTTTTTCATAAAACAGCAAGGAAAAAATACCCAAAAAAGGTGAGATAAAAATTAGGATTTGAATTG
GTCTTTTTGGTTTTGGTTGTTGTTGTACATACACGCTGCATATTGCAGAATTTGAAGTAATAAATCTAGTTTACTGATTT
TTTTCATGCATCTGCTGAATTGCAGAAAATACTTATTGTGAAGCAAAAATAACAACCGGTATCCAAGTACAGCAAGTTGC
AGGAGTTCAATGCCAAGTTGCACCGGCTGTAAAATCATTTCTGGAGAATCTCATTTGGTCGGGAAATTCGGTTCTCTGCC
ATTGAGTACCTGAATCAACCGAAAAAACAAAAAACGATCTAATCCATAAGACGATACAATGATGCTGCTTTTATAATGTG
ATGAAATTCCGTAACATTGATGTGACGATGCTTCTAATTTTATTTTTTTGGACCCTGAGAAGTGCCCAACATCAGGTGCG
AGCACATGGCAACTCCGAACATATTTGATGGCAAGTTTAATGACGCGAGGATGACAACTTTACTTATCAAGTATGGCAAC
TTCCGTGGTTCAGTTTATTTTTGACACAAACTTGCCATGTATCATTGAAATTTGCCATCCTTGCGTGACTATAATTGCCA
TCGAAAAACGTAAGGGCAGAAGTGCCATGCATCTGATGTGTGGCACTTATCATTTGTTTTTTTTTAATATTGCATACGAG
AAAATAATGAAAAATCTTGCCTTTTCCCTGAACACTGTTAGCTTTTCTTCTTGTTGGTGTACTTTGGTTCTATTCGGTTG
AAACCAAATTTAGTTCTTATAATTCGTCAAAGACCCAATTGATCAACAATTTTTTTTTGGGAAGGCGAAACTTCTTCAAA
AAAACGAAAACTGATCGGTTCGGTCTATCTAAACGCCCAACCTAGTTGTATGTGTATACACAACACAAATATCGAGCGTG
AAG
>chr4B_1
AGAAGGAAGGAGCTCGTTGGCAGGCTACCGCACCATCTATCTTAGGATGAAGGAGGGGGTGGGGCACCTACACGCATGGA
-------------CACGTCCGTTTAGACGCAAACAAACACGTACAAACAGTTTGAGTCGTCGCGTTGGAATTGCTCTTGC
TGTCTTGCAGCAAGAAAGACGCGCATGCAGGCGCAGCCATATATATCCACTGCCGATCGACGAGGTGGTCGCCGGTACGC
AGGTACTCGGCTCCACCCACGTAGCGTCGGCGGCCGGAGGGAAAGGACAAAGGAGGTCGGTCCGTCGAAGGCGTGCCCGC
GCCACCTTTCCCGAACTCGCAAGGACAGACGCA----------------ATCCATCCCCAGGTTCCGCGCCGCCACCCAC
GCTGGATGAGATGAGGATCCCATCATGGAACCGACGGGCCCCACGTCGCGTTCCTGGCTCGCCACGTCCGACCATGCGCG
AAAGCAACGCGCGGGAGATCTATGGATAGATTACCGGCCCCGTCGGGGCGCTGCGCCACGGTCCGTCCAGGCCGGATCCG
AAGGGCCTCGGCAGCCCCTGGAAAACCAAACCAACGATAACGATGGCTTGGTCGACCTAGCCTTGTGCTCCTTCCTTTTC
GATGGATTTGTTTTGCCTTTGAGTGGTTGCCAACCT----CGGCCGGTCTTGGGCATGCTTCCAAGCTTCGTCGTCGTCC
TCCAACTAGCTCCAACCGATGATTGGATTTGCAAGGAAGATGGGTGACTTGCCTTTCTGCCCA----AGCTACGATCCAC
TGCACCAC------AGACGCGGCGGTATCTTAACGGCCGGAGGCAGACAGA-GACAGGCTTTATAAGCTAGCCTGTGCTT
GTGCTTCTGCTTGTGCTTGTCCCGATCCATCCATCCATCACAGG---TAGCCTTGTTCTCTCACTTGGACGGGAAGGAAC
AC------------------------------------------------------------ACAGACATACCTCCGCCT
CTTGTATATACGTACGCGCACGCACAGACGC----ACTGGAGTAGCTAGCATCGGCGAAACAGTGCA----CTCATTGGT
TGTTCATCCATGGGCGCCGCCTACTACCTGAGGTGCTTTGGACTTGGCGGGTGCGTGCACCCTCACCCTGCCGCGGCTGC
AAACCGCCAAGGTACGTGCATACGTACGTACGCA----TGTTATGCAACCAATTAAT------AC---------------
--------------------------------------------------------------------------------
-TGTAATACTTACGTGCATCTACACCGTGCTG----ATTGTTCTCGTTAGCTAGTGTAATTG--------CTGTCTCTCT
GTTGTTCTGCATATGGTTTCACCACTCAAATTTGAGCTTC----------------------------GACTAGTATGGA
AAGAACACGAATATGTACTTGCAACTTGCTACGTATAGTTGGCCACCAAGCACTAGTAGTAGTAACTTCATTTTTCTCCA
AGGGAAGATACTCACTGGCTGCTAGCTAGCTAGGA---------------------------------------------
-------------------------------------------------------------------CCTGTTGTACTAT
GTGCCGGGTGCCAAAGCCAGCCGCGGTAGCGTACGGCGGCGCGTGCATGCATGCGTGCCGGAGCACGGCAGACATGTCCA
CAAAGCAACCAAACCGTCTTTGGTGGCGTCGCCTCGCTTCGACACATAGAT----------GCCCAATCATCATTACCAC
TACTATCCCCGTTCATTAGCCTGCCGACTTAACCAGCTAGCCGGTTAGCCACACGTATATAGAGCGTTCGCAT-------
-----ATCTCCATTCACGAAATAAGAATTCAACCTGCTTGTTCATTAATTCGCCGGCCGGCACCCAG-------AGAGAT
GGCCGTCGGTGGCATGATGTTCAAGTGTTTCGGC------CCGTGCATACGGCGGCCTCACCAGCAAGGTAG--------
-CCGGCCGCCCTCAGATCGAGCTCGTGCGCTCACCAGGCGCGCCGCGCCCTAGCCGCATGCATCCATCGTGCACGTCCTG
ATTTC-------CATCCGGTTCTCATGTGTCTACTAATCCTTTCGTTTCTTGGTGATGGCATGCAGGAGCTCGCCAGCAT
GACCCCAAGAAGACGACGAGCCAGCTGCAGAGCGCGGCGTCGTCGGCGTCGGCG------TCGTCGGGGCTGGACTTCCG
GGAGGAGTACACCAGCGCGTTCCGCACCGAGTCCTACAACGACTTCTGGGCGCGGGTGCTCGACATCACGCTCGCCCACG
GCGCCGCCCTCGTGCCCAGGCCCGCCTCCGCCGCCAGCGCCGCGTCCAAGCGCCTCTCCTCCTACCGCGTCTTCGCCGAG
CACCTGCTCGACCCCGACCAGGCCGCCGCCGCCGCCGCGCTCGCGTCCGCGCGCAACCGCCCGGACGTGCACGGCCTCCT
CTCCGCCTACTACGACGAGACGGCCGGCGCCTCATTCCTCTGCAGCCACCTCCTCAAGGACATCGAGCAGATCCGCCTCC
GCTACCGCCCGCTCAAGGCCGCGCTCCGCGGCAGGCTCGTCCCCGGCGGGAGCCTCGCCGACGTCTCCGCCGCGCTCGGG
AAGCCCTTCACCGCCCTGGCGGCCACGCAGGGGAGGCTCGGGGACGCGCGCCTGAGCTCCGCGGACCTCCTCAAGGGCCT
CGACTCCGGCAGGAAGGCCGCGCGCCGCAGGATCAGGACGCTCGCCCGGCTCAGGCAGGCGCTCTCGGTGTCCTTCGTCA
CGGTCGTCGCCGTCGTGGCCGTCGTCGGCGCCTGCGTCGGCGTGCACGTCCTGGCGGCGTTCGCGGCGTTCCCGATGATG
TCGCCGGCGTGGCTGGG---------------------------------------------------------------
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---------------------------------------------------------------------GCTCTTCAGCG
GCCGGGGGGCGCGCCGGGCGCTGGTGCAGCTGGAGGCCGCGGCCAAGGGCACGTACATCCTCAACCGGGACATGGACACC
ATCAGCCGGCTGGTGGAGCGGGTGCGCGACGAGGGGGAGTACATGCTCGCGCTGCTGCAGCTCTGCGTGGCCGAGGAGGC
CGCCGCCGGCGCCGGCGCCGGGAAGGGGAGGCTGGTGCGGGAGGTGCTCAGGCAGCTGTGCAAGAACGAGGAGAGCTTCA
GGCAGCAGCTGGACGAGCTGGAGGAGCACCTCTTCCTCTGCTTCATGACCATCAACAAGGCCAGAAGCATGGTCATCAAG
TTCATGACCACCGCCGCAAGCCAGTGATCGATCACCGGGCATCAGGGCACACTTCAGACTGTACATAATACAGTAGCAGC
ATTCTT------TTTTTTTTCATAAAACAGCAAGCAAGAAAAACCGAAAAAAGTGAGATAAAAAAATAGGATTTCAATTG
GCCTTTTTGGGTTTGATTATTGTTGTACATACACGCTGCATATTGCAGAATTTGGAGTAATAAATCTAGTTTAGTGATTT
TTTTCATGCATCTGCTGAATTGCA-AAATTATTTATCGTGAAAGAAAATTAAAAACCGGTACCCCAGTACAACAAGTTGC
AGAAGTTAAATGGCAAGTTGCACGGGCGGTAAAATCATTTCTGGAGAACCTCATTTAGTTCAGAAAATCTGGTTCTAGCC
ATTGAGTACATGAATTAACCGAAAAAACAAATATGTCCTAGCCCATAAGATTGTGACC---------CTTTTATAATGCG
ATGAGATTGCGTAAAACTGATGTGATGATGCTTCTAATTTT---------------------------------------
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---
>chr4A_558
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-----------TTTGCCTTGGAGTGGTTGCCAACCTCGACCGGCCGGTCTTGGGCATGCTTCCAAGCTTCGTCGTCGTCC
TCCAACTAGCTCCAACCGATGATTGGATTTGGAAGGAAGGTCGATGGCTTGCCTTTCCGCCCAAGCTAGCTACGATCCAC
TGCACCACCACCGCAGACACGGCGGTGTCTTAACGGCCGGAGCGCCGAGGCCGACAGGCTTTATAAGCTAGCCA------
--------GCCTGTGCTTGTCCCATCACAG------------GG---CAGCCTCATTGTTTCACTTGGACGGGAAGAGAC
ACGTACACAGACACTACGTCCTAGCT------------TAGCCACCCTGGTCAAAGGGAG---CAGACATACCTCCGCCT
GTTGTATATACGTACGCGCACA--------C----ACGGGAGTGGCTAGCATCGGCGAAACAGTGCATGCACTAATTGGT
TTTTCATCCATGGGCGCTGCCTACTACCTCAGGTGCTTTGGGTTTGGCGGGTGCGTGCACCCTCACCCCGCTGCGGTTGC
TGACCGCCAAGGTACGTGCATACGTACGTACGTA----TGTTGTGTAAACAATTAAT------ACCTGTAATACTTGCGT
GCATTTTTGGCCACTTTGAGTAATATATTCAGATGGAGGAACTCCTTCCTCGGTGATTCTCAAAAAAAAAAGAAAAATAC
ATGTAATACTTACGTGCATCGATCCCGTGCTA----ATTGTTCTCGTTAGCTGGTGTATATATACGTGTACTGTCTCTC-
--TGTTCTTCATATGGTTTCACCACTCAAATTTGAGCTTTGACACCCTCAAAAAGAATTTTGAGCTTTGACTAGTATGGG
AAGAACAAGAATATAT-------ACTTGCTACGTATAGTTGGCCACTAATAAC---TAGTAGTAATTTCATTTTTCTCCA
AGAGT----------------------------AGCTAGCTAGCTAGGACCAATTGTCCTAGCCATCCTGCATCGGACTC
GGTA----------------------------------------GGGCCGGAGGAGGAGCCAGCCGGCCTGTGG---TAT
GTGCCGGGTGCGAAAGCCAGCCGCGGTAGCGTACGGCGGCGCGTGCATGCATGCGTGCCGGAGCACGGCAGACATCTCCA
CAAAGCAACCAAACCTTCTT---TGGCGTCGCCTCGCTTCGACACATACGTACATGCCCAGGCCCAATCATCATTAGCAC
CACTATCCCCCTTCATTAGCCTGCCGACTTAACTAGCCGGT---TTATCCACACGTATATAGCTAGACCGTTTCGCATAT
GTGAGATGTCCATTCACCAAAG---AATTCACCTTGCTTGTTCATTATCTCGCCGGCCGGCACCCAGAGAGATCAGAGAT
GGCCGTCGGTACCATGATGTTCAAGTGTTTCGGCCCGTGGCCGTGCACGCGGCGGCGTCACCCGCAACAAGGTAGCCAGC
CCCAGCCGCCCACAGAGCTCGCGCGCGCGCTCACCACGTCGTC----------CTGCACGCATCGACCGTGCACATCTTT
GATGATTTCCATCAGCTGCTTCTCGTACGCCTGCTAATCCTTTCTTTCTTTGGTGATGGCACGCAGGAGCTCGCCACCGT
GACCCCAAGAAGCCGACGGGCCAGCTGCAGAGCGCGGCGTCGTCGGCCTCGGCGTCGTCCTCGTCGGGGCTGGACTTCCG
GGAGGAGTACACCAGCGCGTTCCGCACCGAGTCCTACAACGACTTCTGGGCGCGGGTGCTGGACATCACGCTCGCCCACG
GCGCCGCCCTCGTGCCCAGGCCCGCCTCCGCCACCAGCGCCGCCTCCAAGCGCCTCTCCTCCTACCGCGTCTTCGCCGAG
CACCTGCTCGACCCCGACCAGGCCGCCGCCGCCGCCGCGCTCGCCTCCGCGCGCAACCGCCCGGACGTGCACGGTCTCCT
CTCCGCCTACTACGACGAGACGGCCGGCGCCTCCTTCCTCTGCAGCCACCTCCTCAAGGACATCGAGCAGATCCGCCTCC
GCTACCGCCCGCTCAAGGCCGCGCTCCGCGGCAGGCTCGGCCCCGGCGGGAGCCTCGCCGACGTCTCCGCCGCGCTCGGG
AGGCCATTCACCGCGCTGGCGGCCACGCAGGGCAGGCTCGGGGACGCGCGGCTCAGCTCCGCGGAACTCCTCAAGGGCCT
CGACTGCGGCAGGAAGGCCGCGCGCCGCAGGATCAGGACGCTCGCCCGGCTCAGGCAGGCGCTCTCGGTGTCCTTCGTCA
CGGTCGTCGCCGTCGTGGCTGTCGTCGGCGCGTGCGTCGGCGTGCACGTCCTGGCGGCGTTCGCGGCGTTCCCGATGATG
TCGCCCGCGTGGATGGG---------------------------------------------------------------
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---------------------------------------------------------------------GCTCTTCAGCG
GCCGCGCGGCGCGCCGGGCGCTGGTGCAGCTGGAGGCCGCGGCCAAGGGCACCTACATCCTCAACCGGGACATGGACACC
ATCAGCCGGCTGGTGGAGCGGGTGCGCGACGAGGGGGAGTACATGCTCGCGCTGCTGCAGCTCTGCGTGGCCGAGGAGGC
CGCCGCCGGCGCCGGTGCCGGGAAGGGGAGGCTGGTGCGGGAGGTGCTGAGGCAGCTGTGCAAGAACGAGGAGAGCTTCA
GGCAGCAGCTGGACGAGCTGGAGGAGCACCTCTTCCTCTGCTTCATGACCATCAACAAGGCCAGGAGCATGGTCATCAAG
TTCATGAGCACTGCTGCAAGCCGGT----GATCACTGATCAGCAGGGCACACTTCGGATTGTACATAATAGCA-------
-----T------TCTTTTTTCATAAAACAGCAAGAAAAAAACCCCGAAAAA--GTGAGATAAAAATTGGGATTTGAATTG
GTCTTTTTTTGGGTTTG-GTTGTTGTACATACACGCTGCATATTGCAGAATTTGAAGTA---------------------
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---
>chr5A_2255
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-------------------------CCGCCGCTGTAGCGCTCGCGTACGCGCGCAACCACCCGAACGTCCATGGCCTCCT
CTCCGCCTACTACAACGAGACAGCCGACGCGTCCTTCCTTTACAGCAACCTCCTTAAGGACATCGAGCAGATCCGCCTCC
ACTACCGCCCGCTCCAGGCCACGCGCCGCGGCAGGCTCGTCCCCGGATGGAGCCTCACCTATGTCTCCTCCGTGCTCGGG
AGGCCCTTTACTATGTTGGCGGCCATGCAGGGCAGGCTCGGGGACGCGCGAATCAGCTCCACGGACCTCCTCAAGGGCCT
CGACTCCGATAGGAAGGCCGCACGCCATAGGATCAGGACGCTCGCCCGGCTCAGGCAGGCGCTC----------------
-----------GTCGTGGCCGTCCTCGGCGCGTGCGTCGGCGTGCACGTGCGGGCGACGTTTGCGATGTTCCCGATGATA
TCGCCAGCGTGGCTGGGGCTCTTCAGCTACGAAGCACCGATACGTGTAAAACCTGTGTATCGCCGTCCTGTACGTCACCG
ATACGGCGATACACAAGATACGGCAGCGATACGGGTATCCGTGGGGTATCGTGATTTTCGATTTAAAACAAAAGAAAAAA
ATGCCGATACGCCGCCGGGACGGCGCCGACACGCCGGCGACACGGGAAGCCCAGTAGAGGCCCACTCCGCCGCTCGCAAA
GTCGTAACCCTAAACAGCCAGCACTCTCTCTCTCAGTTTGCTATGCGGCAGATTGGATCGAGGATTCAGGTGCGACCGCA
CGAGTGCGCCGCCAATGCCTGGATTCCATCACGGCCATCTGGACTCGCCCCGCCGCCGCTTGGAGTGTCCGCCGCTGCCG
CCTGTTGGCCGTCACCAGCAAGGTATCCCCCGGCCCCTTCCCAATCTCTGCTCTCTTCTCTGTTCCGGTGGTGCCTGGTC
CTCCCGCTCTTGCTGGCTTGCGGCGTGCTGATTATGTGTGTGCTTGCTGCTGAGTGCGTGCGTGGTGTGCGCTTGCTGCG
GCGTGCGTGCGTTCGTACTTGGTGTGTCCATCTGCGTACTTGTTCTGCAATTGTGTGCGTCCTTGCTAGCTACTGATGGG
CACTGGGTGTTGGCCTCTGTTGTATCAACTATGATTTGCTGCTGACCTGCTGACGTGCTAGGGGGTGAAATACTGACAAT
ATCATCTGCAGGCCAATCTTCGGTTGAGAGGCTGGGAAGCATCAGTCATGTATTATTGGGTAAGCAAGCTACAAGCCAAC
GTCTTTACTGTTTTAGGCTTTTAATGCACAAGTGTTATGTTTAGTTCAAGTTCTAATATCAGCATATGATGTATTTTGCA
AGCAGCATGGGGATTCAGTAAATTGATGATCATTCAGTCATGAAGACGACTTGATGAAAAGAGGCATGAATGCAACTTAT
GGGGCAGTACTTTGATCTATTATTCTTTGTCTTTATAGCATGCAATTTACTAATTATTTATATATACTTGCCGTATCACC
GTATTGCTGTTTTTGAAAATTATCGTATCCCGTATCGCCGTATCCGTGTCTCCGTATCGGTGCTACGTAGCTCTTCAGCG
GCCGAGGGGCGCGTCGAGCGCTGGTGCAGCTGGAGGCCGCGGCAAAGGGCACCTACATCCTCAACCGGGACATGGACACC
ATCAGCCGACTGGTGGAGTGGGTGCGGGACGAGGGGAAATACATGATGGTGCTGTTGCAGCTCTGCGTAGCGGAGGAGGC
CAACACCAGAGCCGGCGTCGGGAAGGG-----------------------------------------------------
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---
>SNPs
-----------------------------S---------------SS---S--SS------S-SSSSSSSSS-SSS---S
SSSSSSSSSSSSS-S---S-S---S---SS-----S----SSS-SS-S-S----SS--------------------S---
------------------------------------------SSS-----------------------------------
--------SS------S---------------------------------------------SS--S---SSSS------
------------------S-S------------SSSSSSSSSSSSSSSS-----S-------------------------
---------------------------------S----------------------------------------------
---------SSS-------------------SSSS-S---SSSS-------S----SS----S-----------S-----
------------------------------S------------------SSS----------------------------
--------S------------------------------S----------------------------------------
----------------------------------------S---------------------------------------
--------------------------------------------------------S-----------------------
------------S----------------------------SSSSSS---------------------------------
-----SSS-S--SSS--SS---SSSSSSSSSSSSSSSS----S----S-S-------SSSSS---S-----S-------S
-------------------------------SSSS--------------------------------------S-----S
-----------------------------------------------------------------------------S--
--------------------------S-------SSSS-----------S-S-S-SSSSSSSS-----------------
--------------------------------------------------------------------------------
-----S-------------------S------SSSS--------------------------------------------
------------------------------------------SSSSS-SS------------------------------
--------------------------------------------------------------------------------
--------S-----------S---------S--------------------SS---S------S-S---S-S-SSSSS-S
--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------------------------------
--------------------------------------------------------------------------------
-S------------------------------------------------------------------------------
---------------------S-----------------------------------------S----------------
-----------------------------------------------------------------S--------------
-----------------------S-----------------------------------------S--------------
-S------------------------S-S-SS-----------------------------------------------S
------------------------------------------------S-------------------------------
---------------------------------S-----------------S----------------------------
---------------------------------S----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------S-----------------
---------------------------------------------------S--------------------------S-
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----------------------------------------------------S---------------------------
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----------------S---------------------------------------------------------------
------S-------S-----------------------------------------------------------------
--------------------------------------------------------------------------------
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------S----------S--------------------------S----S---S--S-----------------------
------SSSSSS----------------------S------S---S----------------------------------
----------S----S---------------------------------------------------------S------
------------------------S---S--S----S-----SS----S---S--------S--S------S--------
--S----S----S----------S---S--------------------S-------S--SSS----S--S-S-SSSS---
---------S-----S---------------S-SSSSSSSSSS-SSS-SSSS-SS--SSSSSSSSSS-----------S-
----S---S-----S-S--------S---------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSS
>forward_355
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------CTCACGAGGACAGACGCAAT---------------------------------------------
--------------------------------------------------------------------------------
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---
>reverse_1701
--------------------------------------------------------------------------------
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--------------------GAACACAAACGTTCGGTCGG----------------------------------------
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---
>forward_356
--------------------------------------------------------------------------------
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----------------TCACGAGGACAGACGCAATC--------------------------------------------
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---
>reverse_1702
--------------------------------------------------------------------------------
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---------------------AACACAAACGTTCGGTCGGA---------------------------------------
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---
>forward_434
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--------------GGATCCCATCATGGAACCGG----------------------------------------------
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>reverse_1705
--------------------------------------------------------------------------------
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------------------------ACAAACGTTCGGTCGGACTC------------------------------------
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---
>forward_1020
--------------------------------------------------------------------------------
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----------------------------------------GCTACCCCGATCAAAGGAGC--------------------
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>reverse_2434
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---------------------------------ATACAACGACTTCTGGGCGC---------------------------
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>forward_1720
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--------------------GAACACAAACGTTCGGTCGG----------------------------------------
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>reverse_4498
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-----------------GAGCCGGTGATCACTGATCA-------------------------------------------
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---
>forward_4247
--------------------------------------------------------------------------------
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-------------------------------------------------------------------GGACATGGACACC
ATCAGCA-------------------------------------------------------------------------
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---
>reverse_5228
--------------------------------------------------------------------------------
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---------------------------TGCATCTGATGTGTGGCACT---------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---
