>input_sequence_38064
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--------------------------------------------TCTCCAGCGGCGCCGCCCCCCCCCTCCGGCCCCAAT
GGTGAACCCGCCGGAGCTCTACCACCGGATCCTCGACGTCCCCAGGGGCACCTCCTCGCAGGGGCTCCGCGCCGCCTACA
AGGGCCTCGCCAGGAAATGGCACCCCGACAAGCACCCGCCGGCCTCCAAGCCCGAGGCCGAGGCGCGCTTCAAGGCCATC
ACCGAGGCCTACGAGGTGAGTCCACCGCCCCGCCGCCTCTTCCC-------CGC------------------GCGTCGCC
GCCGTGGAAACCGCATGCATTCGCGGCTCGTCCTGATTCGCTGTCGGCGCGGGCTTGTTTTGGTTGCCGCAGGCGCTCCT
GGACCAGCAGGAGAACCGGGCGGTCTTCGGGGCGTGCAACGACGACCGGGCGGCCGAGATGTTCGGGACGTTCGGC----
-----------GC---------------CGGCGCGCGCATGGCGAGGTCGCGCAGCGACGACTTCTGCATGCGGAGCGCG
CCCGCCACGCCCGCCAGGGAGTTCACCAAGGTCTACAGCTCCGGCAACACGGGCGGCCGCCGCGCCTTCGCCGAGTTCTC
CAGCTCCATCATGCGCAAGGCGCCGCCGCTGGAGCGCGCCCTCGAGTGCACGCTCGAGGAGCTCTGCCGCGGCTGCAAGA
AGCAGGTCAAGTTCACCCGCGACGTCGTCACCAAGAACGGGTACTGCCACTCACTCACCGCTTCCTCCTTCCTCCTCATC
CCCCCACCTAATCCATGAGCAGGACCGATTGAAACTTCACCTGAATTCCTCAAGAAAACAAAG---TATCAATTCACGCG
CAACAGGCCTGATGTGATCCATCATCCATCTACATGGGAGATTTCGACGGATCGATGCCTGGAAAATTTCAGGTCAGGCA
AGAATTCAGACTTTCTCCCCGACGGCGACATCCATTCCACCTTGGCACCTTGCGCCTGCCCGCGCCCCCAATTTGCCGCA
CTGTTTCCAAATCCTCGATGCACAGTAGCCCAGCACCATTGCCGCTTCCTTTCCAGCCTACGCCGCACTTGTTTTTTACA
GTGGGTGAACCGCTTTATAGCCCGCCTGCCCGCCTGCCTGCATTCGTCAGGGGAATATCTAGCTTACTTTGGAACATAAC
AACCAAACCTTTAGGCAACTGCTCTCCGGTGCGCGCCTTTTTTCACCTCGC-GGGCATCTATGCCATCCTTGCAAAGATT
ATCCCACCTAACATGAGACGTAACACGACCGCTAATGATGTTCTTGGAAAAGGGTTTAGTGTCAGGGCCCTGTCTCGAGG
GGATAATTCTAAGGCTTCGGTTGCTTTCCTTGCCACATATGTGTATGCAAGTTTGTTGGGGGCTTTGATTGCCCTTCTTT
TGGACCTATAATCTAACAAAGATGTGGTCCTTTGACGGTATTAATTCATAAAAACCAAAATTTCGTGTACATGTGAGGGC
ATGGCCTAGGAGGGTTCAGAGACAATGACTCCTCAGCTTCCTTGCTCCTTTAGACTCTACTATCCCCTGGGAATGTTGTT
GGGCTGATCACCATCACATGATTAATGCCTTTGACAGGTCAATAGTTAAGAAGGAGGTGACCCAGGCGATCATGGTGAAG
CCGGGGTGGAGGAAGGGGCACAAGGTCACCCTGGACGGCATGGGGGACGAGAGGCCGGGGTGCCTGCCGGCCGACGCCGT
CTTCACCGTGGCCGAGAAGAAGCACTCGACGTTCAAGCGGGTGGGCGATGACCTGGTGCTCAAGGCCAAGGTGCCGCTGG
TGAGCGCGCTCACCGGCTGGTCCTTCTCATTCAGGCTCCTGAGCGGCAAGAAGGTGAGCTGCTCGTTCGACGACGAGGTC
ATCTGCCCCGGGTACGAGAAGGTGATCAAAGGCGAAGGGATGCCGATCGCCGAGCAGAGAGGCGCGCGGGGCGACCTACG
GGTGAAGCTCGAGATCGTCTTCCCGGAGCAGCTCACCGACGAGCAGCGCGCCGGCCTCGCTCAGATCCTCAAGGACTGCA
CCTGAGTGAGTCTGCAATGTTGTTGTTAGGCCCAGCTGTATGTATGAGTTTTCCCGGCCGTGCTGTTAATACCTCTCCAG
AGGGTGTGAGTACATAAAGAGATGGGTCCTTG------------------------------------------------
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---------------------------------------------
>chr3A_1_TraesCS3A01G386400
CATGGTGTCGCATCGCCTAGCGCCCCGCACAAGGGCCTGGCATAGGGAAGCCGACCTGTGTCGGCCCCGTCGCACAAGGT
GTCGAGGACAAGACAAAGCCTCGCCACCATCCATCGGGCTTCGCCTGGTCGTGTCCTCTGGCAAGGCGAGCGAGCAAGAG
GGTGGTCGGCGGCGGAGACCTAGGGCGTGCCCTCCCCGTCGCCTCGTGGGAGAGACACGAGATGGATGATAAGAGCATCT
TCAGCCACGTACCTCTAACTTGACCCCTCAAACGCCCGCGGACGCGCCCGGTCAGTGACCGAGGCGTGTTTGTTTTGAGC
CCCTACATTTTCGTCCGCGCAGCCACACTTGTCATATTTTTTTCTCACATGTCCAGTCACTTGCACTTGATTGGTGGAGA
AGAAGAGAGAGAAAGAAAAGAATGAATATAAAAAGAGAAAAGGTGGTCATATGTCCGATCGTGTCATACGTCGTGGACTG
ACCGGGCGTGCCCGGGCACGTCCGCGAGCCCTCATAACGTGTCCGGGTGGATATGAGAGGTGCCGGTCAGTCCAGACGTT
TGAAACGGATACGAGGGGTTTGGTTGGGTCGCATTTTTATGACCGGTCACCGAACGGACGGCCTGCCCGAACGTTTGAGA
TGGATATGAGGGGTCCAGTGGTAGATGCTCTAAGAATTTTCACTTTCACAAGCAAACGTGAGC-ATAGAAGGCTCCATCA
ATTGACAATTGAACCTCACATCATGGTCCCCACATGCACCACCACTAGCAGTAACAAATGCTACTACAATATCTCCCCCC
CTCTGTCGCTCGCTCGCTCCAACGGGCTTCAAATAGATGGCCCTGCATAAAAGCCACTCATTTCTCCCACTGGCTCACTC
TGCTTCCGCTCTCCTCCTCA---TCCTCTCTGCCACTAACCACCTCCCTCTGCATCAAACCCACCACTCCCTCCTCCCTC
CCCTCCCCCGTTTCTCGCTCGCTTTCCCCCGGGACGCGACCGAATCTCCAGCGGCGCCGCCCCCCCCCTCCGGCCCCAAT
GGTGAACCCGCCGGAGCTCTACCACCGGATCCTCGACGTCCCCAGGGGCACCTCCTCGCAGGGGCTCCGCGCCGCCTACA
AGGGCCTCGCCAGGAAATGGCACCCCGACAAGCACCCGCCGGCCTCCAAGCCCGAGGCCGAGGCGCGCTTCAAGGCCATC
ACCGAGGCCTACGAGGTGAGTCCACCGCCCCGCCGCCTCTTCCC-------CGC------------------GCGTCGCC
GCCGTGGAAACCGCATGCATTCGCGGCTCGTCCTGATTCGCTGTCGGCGCGGGCTTGTTTTGGTTGCCGCAGGCGCTCCT
GGACCAGCAGGAGAACCGGGCGGTCTTCGGGGCGTGCAACGACGACCGGGCGGCCGAGATGTTCGGGACGTTCGGC----
-----------GC---------------CGGCGCGCGCATGGCGAGGTCGCGCAGCGACGACTTCTGCATGCGGAGCGCG
CCCGCCACGCCCGCCAGGGAGTTCACCAAGGTCTACAGCTCCGGCAACACGGGCGGCCGCCGCGCCTTCGCCGAGTTCTC
CAGCTCCATCATGCGCAAGGCGCCGCCGCTGGAGCGCGCCCTCGAGTGCACGCTCGAGGAGCTCTGCCGCGGCTGCAAGA
AGCAGGTCAAGTTCACCCGCGACGTCGTCACCAAGAACGGGTACTGCCACTCACTCACCGCTTCCTCCTTCCTCCTCATC
CCCCCACCTAATCCATGAGCAGGACCGATTGAAACTTCACCTGAATTCCTCAAGAAAACAAAG---TATCAATTCACGCG
CAACAGGCCTGATGTGATCCATCATCCATCTACATGGGAGATTTCGACGGATCGATGCCTGGAAAATTTCAGGTCAGGCA
AGAATTCAGACTTTCTCCCCGACGGCGACATCCATTCCACCTTGGCACCTTGCGCCTGCCCGCGCCCCCAATTTGCCGCA
CTGTTTCCAAATCCTCGATGCACAGTAGCCCAGCACCATTGCCGCTTCCTTTCCAGCCTACGCCGCACTTGTTTTTTACA
GTGGGTGAACCGCTTTATAGCCCGCCTGCCCGCCTGCCTGCATTCGTCAGGGGAATATCTAGCTTACTTTGGAACATAAC
AACCAAACCTTTAGGCAACTGCTCTCCGGTGCGCGCCTTTTTTCACCTCGC-GGGCATCTATGCCATCCTTGCAAAGATT
ATCCCACCTAACATGAGACGTAACACGACCGCTAATGATGTTCTTGGAAAAGGGTTTAGTGTCAGGGCCCTGTCTCGAGG
GGATAATTCTAAGGCTTCGGTTGCTTTCCTTGCCACATATGTGTATGCAAGTTTGTTGGGGGCTTTGATTGCCCTTCTTT
TGGACCTATAATCTAACAAAGATGTGGTCCTTTGACGGTATTAATTCATAAAAACCAAAATTTCGTGTACATGTGAGGGC
ATGGCCTAGGAGGGTTCAGAGACAATGACTCCTCAGCTTCCTTGCTCCTTTAGACTCTACTATCCCCTGGGAATGTTGTT
GGGCTGATCACCATCACATGATTAATGCCTTTGACAGGTCAATAGTTAAGAAGGAGGTGACCCAGGCGATCATGGTGAAG
CCGGGGTGGAGGAAGGGGCACAAGGTCACCCTGGACGGCATGGGGGACGAGAGGCCGGGGTGCCTGCCGGCCGACGCCGT
CTTCACCGTGGCCGAGAAGAAGCACTCGACGTTCAAGCGGGTGGGCGATGACCTGGTGCTCAAGGCCAAGGTGCCGCTGG
TGAGCGCGCTCACCGGCTGGTCCTTCTCATTCAGGCTCCTGAGCGGCAAGAAGGTGAGCTGCTCGTTCGACGACGAGGTC
ATCTGCCCCGGGTACGAGAAGGTGATCAAAGGCGAAGGGATGCCGATCGCCGAGCAGAGAGGCGCGCGGGGCGACCTACG
GGTGAAGCTCGAGATCGTCTTCCCGGAGCAGCTCACCGACGAGCAGCGCGCCGGCCTCGCTCAGATCCTCAAGGACTGCA
CCTGAGTGAGTCTGCAATGTTGTTGTTAGGCCCAGCTGTATGTATGAGTTTTCCCGGCCGTGCTGTTAATACCTCTCCAG
AGGGTGTGAGTACATAAAGAGATGGGTCCTTGTACATACAGTTCAGTTTTTCTCTCTATAAATAT----------ATAAA
ACGTGAGGCAAGCATTATGTGGCTAGTATAGTACATGTTTGGTCCATGAGCTGTATGTGCACGCGAGATCTCGCCTTGTT
TTCTTGGCCTATTGATGCATCCAGTTCATTCATTGCATTAACTATCGAGTTAACTATCTCAGAGTGCAGTTAATTGGTGC
TCGTTCCGTCAGTTACTAGCGTGCGCTGGTGCCAGCCTCGCGCTAATCCCTTGCTTGGCCGAGGAATTTACATTGCAGGT
TTGCTTTGTGCATTCTTCCCCAGCTTTTCCTTGTCACCAACTGACACCCTGTTGATGCTGGTGGTGCTTAAATCTCAAGG
AATTCAGGACAGTTTCACCAGTTAATCATACTGCTGCTGCAGGTGCAAGGATCGTGGATGGGCCATTTGGTAGGCGAGAA
AAGCCCGCGCGATCCGGAGAATTCGACGAAACTGGACCATGGCAATGAATCGCTCGTACTCGAGCGCGAAAATTGAATGA
AATGATCTAGTTGAGCT----------GAGGGGAGGAGGAGCTGGAATTGATGGTTGGTGCAGTGCAGTTCCTCCAGCAG
ATGTTGGGCCCCTGATGCTCCTGGAAAGGAAAGAGCAACCAAACCAACCCTGTTTGGGAGTTGCGGTGGTTCAGTGCCAA
TTGGCGTTTGGTAGCCCAGCAGCAACAGAAGAGAGCAACTTGTGTGTGTGCTGCACTAGTGCCAGTAGGTGCTGCACAAA
CACCTTGGGACAACTTGGCAACAAGTTCTC-------------------GATATGCTGCTGAATGCTTATGCCTAAACTA
ACCTTCCTT-TTTTTCTCCTTTCTC-----AGACCATGCATACTGTAGCGAATTCGACAAGATGTGGTGCCGGCAAAGGA
AGAGAAGGCATTTTATGTTCACGTGTCACAGGGTGGTCAAGAGGCTGCTGAATATA--GATCCTAAGTTACAAACATGGA
AGAATCGGTCGGATCATC------GCCGGCGGCGGCGCGGCGGGG
>chr3D_671
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------TAAGATTTTTCACTTTCACAAGCAGACA-GAGC-ATGGAAGGCTCCATCC
ATTGACAATTCAACCTCACACTATGG-CCCCACATGCACCACCGCTGGTAGTAACAAATGCAGTAGA-T-----------
CTCTCCCTCTCTCTCGCTCCAAACGGTTTCAAATAGATCGCCCTGCATAAAAGCCACTCATTTCTCCCACTGGCTCACTC
TGCTTCCGCT---CTCCTCA---TCCTCTCTGCCACTAACCACCTCCCTC-----------------------CTCCCTC
CCCTCCCCCGTTTC--GCTTTCCCC---------CGCGACCGAATCTCCAGCGGCGCCG---TCCCCCTTCGGCCCCAAT
GGTGAACCCGCCGGAGCTCTACCACCGGATCCTCGACGTCCCCAGGGGCACCTCGTCGCAGGGGCTCCGCGCCGCGTACA
AGGGCCTCGCCAGGAAATGGCACCCCGACAAGCACCCGCCGGCCTCCAAGCCCGAGGCCGAGGCGCGCTTCAAGGCCATC
ACCGAGGCCTACGAGGTGAGTAG--CGCCCCGCCGCCTCCCTCCCCGCGCGCGC------------------TCGTCGCC
GCCGTGGAAACCGCATGCATTCGCGGCTCGTCCTGATTCGCTGTCGGCGTGGGCTTGTTTTGGTTG-CGCAGGCGCTCCT
GGACCAGCAGGAGAACAGGGCGGTGTTCGGGGTGTGCAACGACGATCGGGCGGCCGAGATGTTCGGGACGTTCGGC----
-----------GCGGGCGGGGGCGGGGGCGGCGCGCGCATGGCGAGGACGCGCAGCGACGACTTCTGCATGCGGAGCGCG
CCCGCCACGCCGGCCAGGGAGTTCACCAAGGTCTACAGCTCCGGCAACACGGGCGGGCGCCGCGCCTTCGCCGAGTTCTC
CAGCTCCATCATGCGCAAGGCGCCGCCGCTGGAGCGCGCCCTCGAGTGCACGCTGGAGGAGCTCTGCCGCGGCTGCAAGA
AGCAGGTCAAGTTCACCCGCGACGTCGTCACCAAGAACGGGTACCGCCACTCACTCGCCGCTTCCTCC----------TC
CCCCCACCCAATCCATGAGCAGGACTGATTGAAACTTCGCCTGAATTCTTAAAGAAAACAAAATACTATCAATTCACGCG
GAACAGGCCTGATGTGATCCATCACCCATCTACATGGGAGATTTCGACGGATCGATGCCTGGAAAATTTCAGGGCAGGCA
AGAATTCAGACTTTCTCCCCGACGGCGACATCCATTCCACCTTGGCACCTTGCGCCCGCG-----CCCCAATTCGCCGCA
CTGTTCCCAAATCCTCGGTGCACAGTAACCCAGCACCATTGCCGCTCCCTTTCCAGCCTACGCCGCACTTGTTTTTTACA
GTGGGTGAACTGCTTTATAGCCTGCCTG------------CATTCCTCAGGGGAATATTTAGCTTACTTTGGAACATAAC
AACCAAACCTTTAGGCAACTGCTCTCCGGTGCGCGCCTTTTTTTACCTCGCGGGGCATCTATGCTATCCTTGCAAAGATT
ATCCTACCTAACATGAGACGTAACACGACCACTAATGATGTTCTTGG-AAAGGGTTTAGTGTCAGGGCCCTGTCTCGAGG
GGATAATTCTAAGGCTTCGGTTGCTTTCCTTGCCACATATGTGTATGGAAATTTGTTGGGGCCTTTGATTACCCTTCTTT
TGGACCTATAATCTAACAAAGATGTGGTCCTTTGACGGTATTAATTCATAA---------TTTCGTTTACATGTGAGGGT
ATGGCCTAGGAGGGTTCAGAGACAATGACTCCTGAGCTTCCTTGCTCCTTTAGGCTCTA---TCCCCTGGGAATGTTGTT
GGGCTGATCACCATCACATGATTAATGCCTTTGACAGGTCAATAGTTAAGAAGGAGGTGACCCAGGCGATCATGGTGAAG
CCGGGGTGGAGGAAGGGGCACAAGGTCACCTTGGACGGCATGGGGGACGAGAGGCCGGGGTGCCTGCCGGCCGACGCCGT
CTTCACCGTGGCCGAGAAGAAGCACTCGATGTTCAAGAGGGTGGGCGACGACCTGGTGCTCAAGGCCAAGGTGCCGCTGG
TGAACGCGCTCACCGGCTGGTCCTTCTCATTCAGGCTCCTGAGCGGCAAGAAGGTGAGCTGCAAGTTCGACGACGAGGTC
ATCTGCCCGGGGTACGAGAAGGTGATCAAAGGCGAAGGGATGCCGATCGCCGAGCAGAGAGGCGCGCGGGGCGACCTACG
GGTGAAGCTCGAGATCGTCTTCCCGGAGCAGCTCACCGACGAGCAGCGTGCCGGCCTCGCTGAGATCCTGAAGGACTGCA
CCTGAGTGAGTCTGCAATGTTGTTGCTAGGCCCAGCTGTATGTATAAGTTTTCCCGGCCGTGCTGTTAATACCTCTCCAG
AGGGTGTGAGTACATAAAGAGATGGGTCCTTGTACATACAGTTCAGTTTTTCTCTCTCTCTATATATGATATATGATGAA
ACGTGAGGCAAGCATTATGTGGATAGTATAGTAAATGTTTGGTCCATGAGCTGTATGTACACGCGAGATCTCGCCTTGTT
TTCTTGGCCTCTTGATGCCTCCAGTTCATTCATTCCATTAACTATC------------TGAAGGTGCAGTTAATTGGTGC
TCGTTCCGTCAGTTACTAGCGTGCGCTGGTGCCAGCTTCGCGATAATCCCTTGCTTGGCCGAGGAATTTACATTACAGGT
TTGCTTTGTGCA---TTCCCCAGCTTTTCCTTGTCACCAACTGACAAC---------CTGGTGGTGCTTAAATCTCAAGG
AATTCAGGACAGTTTCACCAGTTAATCATACTGCTGCAGATGCTT---GGATCGTGGATGGGCCATTTGGTAGGCGAGAA
AAGCCCGGGCGATCCGGAGAAATCGACGAAACTGGACCATGGCAATGAATCGCTCGTACTCGAGCGTGCAAATTGAATGA
AATGATCTAGCTGATGGGAAGGGAGGGGAGGGGAGGAGGAGCTGGAATTGATGGTTGGTGCAGCGCAGTTCCTCCAGCAG
ATGTTGGGCCCCTGATGCTCCTGGAAAGGAAAGAGCAACCAAACCAACCCTGTTTGGGAGTTGTGGTGGTTCAGTGCCAA
TTGGCGTTTGGTAGCCCAGCAGCAGCAGAACGGAGCAACTTGTGTGTGTGCTGCACTAGTGCCAGTAGGTGCTGCACAAA
CACCTTGGGACAACTAGGCAACAAGTTCTCCACCAGTCAACGTGGTGGAGATATGCTGCTGAATGCTTATCCCTAAACTA
ACCTTCCTTTTTTTTCTCTTTTCTC-----AGACCATGCATACTGTAGCGAATTCGACAAGATGTGGTGCCGGCAAATGA
AGAGGAGGCGTTTTATGTTCACGGGTCACAGGATGGTCAAGAGGCTGCTGAATATA--GATCCTAAGTTACAAACATGGA
AGAATTGGTCCGATCATC------GCCGGCGGCGGCGCGGCGGGG
>chr3B_677
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------------------------------------TTTTCACTTTCACAAGGAGACGTGAGCAATGGAAGGCTCCATCC
ATTGACAATTCAACCTAACAATACGG-CCCCACATGCACTACCACTAGTAGTAACAAATCCCTCGCTCT-----------
CTCTCTCGCTCGGTCGCTCCAACGGGTTTCAAATAGATCGCCCTGCATAAAAGCCACTCATTTCCCCCACTGGCTCACTC
TGCTTCCGCT---CTCCTCCTCGTCCTCTCTGCCACTAACCACCTCCCTCTGCATCAAACCCACCACTCCCTCCTCCCTC
CCCCGTTTC---TC--GCTTTCCCC---------CGCGACCGAATCTCCAGCGGCGTCG---CCCCCCTCCGGCCCCAAT
GGTGAACCCGCCGGAGCTCTACCACCGGATCCTCGACGTCCCCAGGGGCACCTCGTCGCAGGGGCTCCGCGCCGCCTACA
AGGGCCTCGCCAGGAAATGGCACCCCGACAAGCACCCGCCGGCCTCCAAGCCCGAGGCCGAGGCGCGCTTCAAGGCCATC
ACCGAGGCCTACGAGGTCAGTGT----CCCCCCCGCCTCTTCCC-------CGGGCGCCTCCCTCCGTGCGTGCGTCGCC
GCCGTGGAAACCGCATGCATTCGCAGCTCGTCCTGATTCGCTGTCGGCGTGGGCTTGTTTTGGTTG-CGCAGGCGCTCCT
GGACCAGCAGGAGAACAGGGCGGTGTTCGGGGTGTGCAACGACGACCGGGCGGCCGAGATGTTCGGGACGTTCGGC----
-----------GCCGGCGCCGGCGGGGGCGGCGCGCGCATGGCGAGGTCGCGCAGCGACGACTTCTGCATGCGGAGCGCG
CCCGCCACACCGGCCAGGGAGTTCACCAAGGTCTACAGCTCCGGCAACACGGGCGGCCGCCGCGCCTTCGCCGAGTTCTC
CAGCTCCATCATGCGCAAGGCGCCGCCGCTGGAGCGCGCCCTCGAGTGCACGCTGGAGGAGCTCTGCCGCGGCTGCAAGA
AGCAGGTCAAGTTCACCCGCGACGTCGTCACCAAGAACGGGTACTGCCACTCGCTCACCGCTTCCTCCCCCTC------C
CCCTCACCAAATCCATGAGCAGGACTGATTGAAACTTCACCTGAATTCTTCAAGAAAACAAAATA---TCAAATCACGCG
GTACAGGCTCGATGTGATTCATCATCCATGTAAATAGGAGATTTCGACGGATCGATGCCTGGAAAATTTCAGGGTAGGCA
AGAATTCAGACTCTGCTCCTGACGGCGACATCCATTCCACCTTGGCACCTTGCGCCCACG-----CCCCAATTCGCCGCA
CTGTTTCCAAATCCTCGATGCACAGTAGCCCAGCACCATTGCCGCTCCCTTTCCAGCCTACGCCGCACTTGTTTTTTACA
GTGGGTGAACTGCTTTATAGCCTGCCTGCCTACCTTCCTGCATTCGTCAGGGGAATATTTAGCTTACTTTGGAACATAAC
AACCAAGCCTTTAGGCAACTGCTCTCCGGTGCGCGCCTTTTTTCACCTCGC-GGGCATCTATGCTATCCTTGCAAAGATT
ATCCTACCTAACATGAGA-GTAATACGACCACTAATGATGTTCTTGG-AAAGGGTTTAGTGTCAGGGCCCTGTCTCGAGG
GGATAATTCTAAGGCTTCAGTTGCTTTCCTTGCCACATATGTGTATGCAAGTTTGTTGGGGGCTTTGATTACCCTTCTTT
TGGACCTATAATCTAACAAAGATGTGGTCCTTTGACGGTATTAATTCATAA---------TTTCGTGTGCATGTGAGGGC
ATGGCCTAGGAGGGTTCAGAGACAATGACTCCTGAGCTTCCTTGCTCCTTTAGACTCTA---TCCCCTGGGAATGTTGTT
GGGCTAATCACCATCACATGATTAATGCCTTTGACAGGTCAATAGTTAAGAAGGAGGTGACCCAGGCGATCATGGTGAAG
CCGGGGTGGAGGAAAGGGCACAAGGTCACCTTGGACGGCATGGGGGATGAGAGGCCAGGGTGCCTACCGGCGGACGCCGT
CTTCACCGTGGCCGAGAAGAAGCACTCGACGTTCAAGAGGGTGGGCGACGACCTGGTGCTGAAGGCCAAGGTGCCGCTGG
TGAACGCGCTCACCGGCTGGTCATTCTCATTCAGGCTCCTGAGCGGCAAGAAGGTGAGCTGCTCGTTCGACGACGAGGTC
GTCTGCCCTGGGTACGAGAAGGTGATCAAAGGCGAAGGGATGCCGATCGCCGAGCAGAGAGGCGCGCGGGGCGATCTACG
GGTGAAGCTCGAGATCGTCTTCCCGGAGCAGCTCACCGACGAGCAGCGCGCCGGCCTCGCTGAAATCCTCAAGGACTGCA
CCTGAGTGAGCTTGCAATGTTGTTGTTAGGTCCAGCTGTATGTATAAGTTTTCCCGGCCGTGCTGTTAATACCTCTCCAG
AGGGTGTTAGTACATAAAGAGATGGGTCCTTGTACATACAGTTCAGTTTTTCTCTCTATATATATG----ATATGATGAA
ACGTGAGCCAAGCATTATGTGGATAGTATAGTAAATGTTTGGTCCATGAGCTGTATGTACACGCGAGATCTCGCCTTGTT
TTCTTGGCCTCTTGATGCCTCCAGCTCATTCATTCCATTAACAACC------------TCAGAGTGCAGTTAATTGGTGC
TCATTCCGTCAGTTACTAGCGTGCGCTGGTGCCAGCTTCGC-CTAATCCCTTGCTTGGCCGAGGAATTTAC-----AGGT
TTGCTTTGTGCA---TTCCCCAGCTTTTCCTTGTCACCTACTGACACGCTGTTGATGCTGGTGGTGCTTAAATCTCAAGG
AATTCAGGACAGTTTCACCAGTTAATCATACTGCTGCAGATGCTT---GGATCGTGGATGGGCCATTTGGTAGGCGAGAA
AAGCCCGGGCGATCCGGAGAATTCGACAGAACTGGACCATGGCAATGAATCGCTCGTACTCGAGCGCGCAAATTGAATGA
AATGATCTAGCTGAGGT-----GAGGGGAGGGGAGGAGGAGCTGGAATTGATGGTTGGTGCAGCGCAGTTCCTCCAGCAG
ATGTTGGGCCCCTGATGCTCCTGGAAAGGAAAGAGCAACCAAACCAACCCTGTTTGGGAGCTGCGGTGGTTCAGTGCCAA
TTGGCGTTTGGTAGCCCAGCAGCAACAGAAGAGAGCAACT--TGTGTGTGCTGCACTAGTGCCAGTAGGTGCTGCACAAA
CACCTTGGGACAACTAGGCAACAAGTTCTCCACCAGTCAACGTGGTGGAGACATGCTGCTGAATGATTATGCCTAAACTA
ACCTTCCTTCTTTTTTTCCCCTCTTTTCGAAGGCCATACATACTGTAGCGAATTCGACAAGATGTGGTGCCGGCAAATGA
AGAGAAGGCGTTTTATGTTCACGGGTCACAATGTGGTCAAGAGGCTGCTGAATATATAGATCCTAAGTTACAAACATGGA
AGAATCGGTCCGATCATCGCCGCCGCCGGCGGCAGCGGGG-----
>chr6A_953
CCTCC---------------------------------------------------------------------------
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--CTCCCCCGTTTCTCGCTTTCCCC---------CGTGACCGAATCTCCAGCGGCGCCG---CCCCCCTCCGGCCCCAAT
GGTGAACCCGCCGGAGCTCTACCACCGGATCCTCGACGTCCCCAGGGGCACCTCCTCGCAGGGGCTCCGCGCCGCCTACA
AGGGCCTCGCCAGGAAATGGCACCCCGACAAGCACCCGCCGACCTCCAAGCCCGAGGCCGAGGCGTGCTTCAAGGCCATC
ACCGAGGCCTACAAGGTGAGTCTACCGCCCCGCCGCCTCTTCCC-------CGC------------------GAGTCACC
ACCGTGGAAACCGCATGCATTCGCGGCTCGTCCTGATTCGCTATCGGCGCGGGCTTGTTTTGGTTGCCGCAGGCGCTCCT
GGACCAGCAGGAGAACCGGGCGGTCTTCGGGGCGTGCAACGACGACCGGGCGGCCAAGATGTTCGGGACCTTCGGCGCCG
GTTGCGGCAGGGC---------------CGGCGCGCGCATGGCGAGGTCGCGCAGCGACGACTTCTGCATGCGGAGTGCG
CCCGCCACGCCGGCCAGGGAGTTCACCAAGGTCTACAGCTCCGGCAACACGGGCGGCCGCCGCGCCTTCGCCGAGTTCTC
CAGCTCCATCATGCGCAAGGCGCCGCCGCTGGAGCGCGCCCTCGAGTGCATGCTCGAGGAGCTCTGTCGCGGCTGCAAGA
AGCAGGTCGAGTTCACCCGCGATGTCGTCACCAAGAACGAGTACTGCCACTCACTCGCCGCTTCCTTC----------TT
CCTCCACC------------------GATTGAAACCTCGCCTGAATTCCTCAAGAAAACGAAATA---TCAATTCACGCG
GAACAGGCCTGATGTGATCCATCACCCATCTACATGGGAGATTTCGACGGATCGATGCCTGGAAAATT------------
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>SNPs
-S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----S------------------S-----------S------------S
----------S---------SS----S---------------------S------------SS-SSSSSSSSSSSSSSSS
----S---------------------S-----------S-----------------------------------------
----------SSS-------------------------------------------------------------------
-------------------SS-SSSSSSSSSSSS-------------------------SSS------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------S---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------S--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------SS-SSSSSSS--
--------S----------------S------------------------------------S-----------------
S------------------------------------------------------------------------S------
--------------------------------------------------------S--SSSSSS--------S------
----------------------------------------------S---------------------------------
----------S-----------S-------SS---S----------------------S---------------------
----------------------------------------------------------------S---------------
----S-------------------------S----------------S--------------------------------
----------------------------------------------------------------------S---------
---------------------------------------------------SSSSSSSSS--------------------
---------------------------------S-------------------------SSS------------------
--------------------------------------------------------------------------------
------------------------------S-------------------------------------------------
-------------------------------------S----------S-------------------------------
---S----------------------------------------------------------------------------
--------S-----------------------------------------------------------------------
-------------------------------------------------------------S------------------
---------------------------------------------S----------------------------------
------------------------------------------------------------S----------------S--
----------------------S----------S------------------------S---------------------
----------S-------S---------------S-----------SSSSSSSSSSSS----------------------
------------------------------------S-------------------------------------S-----
------------SSS-----------------------------------------------------------------
-------------------------------------S-SS-S-SSSS--------------------------------
-------S------------------------------------------------------------S-----------
----------S----S-----------------------------------------------S----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------S----------------------------------------------------------------
-----------------------------------------------------------------------------S--
---------S-------------S--------------------------------------------------------
----------S----------------------------------
>forward_342
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--CTACATTTTCGTCCGCGCAG----------------------------------------------------------
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>reverse_1994
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------TGCCGCA
CTGTTTCCAAATC-------------------------------------------------------------------
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>forward_563
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---------------------------------------------------------------CGGTCAGTCCAGACGTT
TGA-----------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------
>reverse_2542
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------ATCCCCTGGGAATGTTGTT
GG------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------
>forward_893
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------CTCACTC
TGCTTCCGCTCTC-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------
>reverse_2889
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------CGGGTACGAGAAGGTGATCA----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------
>forward_2758
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------GAAGCACTCGACGTTCAAGC------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------
>reverse_4104
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------TGTCACAGGGTGGTCAAGAG-------------------------------------
---------------------------------------------
