>input_sequence_38044
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--------------------------------------ATGGAGAGGGGATCCGGCAAGGAGATCGACTGGGAATCCTGG
GCGATTAAGGACCGGATGAAGGAGATGGTATCCGTGGGGATGGAGCGCAAAGACGTGCTTGACTCACTTACTCCTAGCCT
TTCTGGGTGGAGGCGGATACACAAAGAGGAAAGCAGTAAATCGTCTTGGATGATCACCGGAAAAGCGGCCAAGGAAACGG
CGTCCGAACTGATGGAATCGAGCACAATGGAGCTACCCGAGAAAGAACTCGACAACATCTTGCAAGGTATGGAGGAGTTG
GGCCACCGGATGTTGTCTATGGCGTATTTTCTGCGCAAATCCGGTGCCCCCAGCGTCTCCTTTCACCAGGCCTCCGAGCT
GCTTAGCACTACATACAGATTACAGCGGAACTC----------------------GGAGGATTTCTACCAAGATACCGAG
GCTGCTGAGAGTAAGAGTGTGGAGAATTTCGACCCATATAGCGAGGGCAGGAGTGT------TGAGAGTGAGAGTGAGGT
TGAGGGTGACGATGACTGTGGTGATGACGATGAGGAGATTGAGAGTGAGGTTGAGAGTGATGATGATTGTTATGATGATG
ACGAGGAGATTCCCAGCGAAATATGCAGTCTCACCAAGTACTTGAGATTTTGCTCTCGTTATGAGAACAAGTTGGCGCTG
ATTGAAAACGGAGAT------------------GAAGATAAAGAT------GAAGATGAGGATGAGGATGAGGATGGGGA
TGAAGATGAGGATGATGATGAGGAGGAGGAGGATAGACCCACATTGGAGTATCTCGAAAAGGTGATAGCTGATGAACAGA
AAAGTTTCGGCGAAGAATATGACTGCTGGGAACGTGTATGGGGTAGCAAGATTGGAGGGTGCGGTGGCTTGGAAGATACA
AGTAAAAAACTTCAATGCTACTCAGCTTACTCATCAACTAAATTTGTATCATCTGTTTGCTTCCATTTGTTACAAAATTT
TAGCAGATCACTAACTTCATTTCTCCTTGAATGT-------AGAAAAGATAATAGTTTACTCATTCATGTGAGATTTCTG
ACGGTTGACACTT-----TGTTGATGCAGCTACATTGAGCCCTATGTTCTTTACCCACTGCACACCTCGTGCCATCCCAT
CCCCTGCTGCTATTGCGGGGCGCACGTTGTTGATCTATTCCATCAGGATTTT------------GGAAAAGAAAGGAAAA
ACCTTGAAGTGGCCACTCAAAGTGTATGGTGTGATCGTTGCTCGAGACACGGTGGACCGCAACCGCAACATTATATTCTC
TCGATCAAGGCATAACTACCAAAAACTCGATAAACAAGTATGTACTATACATT-CAGTTTGCTCCTCATTTTTCTTTGTT
TCCTCTTCCTACTTTCCTAGTCCACTGGAGTGCTTTCCTAGGA----AATCATTGCAATCAAGAATAATGATATGATCCT
TGCAGGATTCTTCTCTATGCTTGACTGGACCATCTCGTGCAATTTTTGCTGTCGACACTGTTGACTTTGAAGTTGAACTC
AAAATAAATGAGGGGGCCGAAGAAGATACACCATTGATCAGTTCTTGCAACCACCTTTATGACAGTGCATATTATGATTT
AAATGTCCGTCAACTGAGGCCCGCAACTGTTGATAGCATCTCTTCAATATTCATCCGTGGCTGCTGGTGTGATGCAGAAT
TAACCTTTGCGCAGTTTGATACAGCCGTCCAGGCCACCATTGTGGGTGTTCACGTTGTTGAAGGGGGTTGGCCTTTCAAA
TGTGGATGCAAAGTTGCTTGCTCCTGGTCTGCTGCAACAAGGAATATCGGTCCCACTTCTAGGGAAGTTGTTTTGCTTGA
TTATCGTGGTGAAAATATGGATGTAGGATCAAATGGTTACCTTCATCTGTCGAGAAATGTTGTTCCAGTGGAGTTACAAG
GAACACTGAGGCTTGTCATACAGGCTTACCCGGAAGCTGGTTGTAAACCTGTAGAGGGTCATGTGGACTTCGGTGTCCAA
CATTGCCAAACAAGCAACCTATCATGTGAAGTTGACAACTCTACGGTCGAGGTTACTGTTGCTTGGTCCCTCCTTGTAAA
GGAAAAGTTGGATCTGTTGGTGGAGGGCTATGCCGCAGGGCGGGATTGA-------------------------------
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>chr2D_1_TraesCS2D01G519300
GGCCTCACGTCATCCCGATGCTTCCCGGCGAGCGACCTCGCAGCACCGGTGCTCCCGCCGGCGAGCGACCTCCCAGCATC
CGATGCTTCGGGCGAGTATCCTTGCAGCACCGGTGCTTCGGTCGGCGAGCGACCTCGC----------------------
--------------------------------AGCATCCGATGCTTCCGGCGCTGCCCCGTCATGGTCGTCA--------
ACGCGGTCTCAGCATCATCGCGGCCAGCGGCGTGGTTGCAGCATCGCCGCGGTTATTCGACTCCGGGGGCCGCGGCAATT
GACGCGCGCCTTGAGGCAGCATCGCCGTGGTTGTTCGACGCCGTCACAGCACGCTTTTTGCGCCGTGGTCGTCGACATCC
CGCACCACCTGCAGCACTAGCTATCTCACGGCACCGGCACCCTCCTTTCTTGCTGCAGCTCACA-------CGTCCAGCC
CTGCAGCACCCGTCAACGGAAGCAGTCGTCGCCCTCAACCATGGTGGCCTAGAATTTCCGATGGTGAGATCCATGATTCA
GAGGGAGAGAGAGATGAGAAGGGCGGGCGTTGAGACGTGCGGCTGGAAAATGTTTCATCGGGATAACGAGAAAGAGGATA
CGCGGTGCGTGGGCCCTAGTGGACACGCGTCGCGCGCGCATGGAGGTTGATGCGTTGGCTGTCTACATCCGGATGTACAG
AATCAGTTTCCGGGAGAGAGCCAGAAAGATTGGATCGGTGTCGTGAGGGAAAGTGGAGAGGGACGTGGGCTCGCGGGGTG
GGCAGTGGGACGACCGATCACGTAACAAAAACCACAACCGATCGCATAACAGTACCGGAAAACTGCACGAGTCGTAGTAT
A---------ATCCGGCCGTCTCGTTGAAACCATATAATACTACTCGATCAAGACAGGGACGGTTCCCCTGAACAACAAC
AACAAAAGGATAATCTACGCGGCGGCGGCGGCTGCGAGTGCCCCAGCGTGGAAAGCCTGCTACCTCATCTCAATCCCCCA
AAAAACCAGAGAGGAGAGCGACAGCCGGTGGCAAGGAGATGGAGAGGGGATCCGGCAAGGAGATCGACTGGGAATCCTGG
GCGATTAAGGACCGGATGAAGGAGATGGTATCCGTGGGGATGGAGCGCAAAGACGTGCTTGACTCACTTACTCCTAGCCT
TTCTGGGTGGAGGCGGATACACAAAGAGGAAAGCAGTAAATCGTCTTGGATGATCACCGGAAAAGCGGCCAAGGAAACGG
CGTCCGAACTGATGGAATCGAGCACAATGGAGCTACCCGAGAAAGAACTCGACAACATCTTGCAAGGTATGGAGGAGTTG
GGCCACCGGATGTTGTCTATGGCGTATTTTCTGCGCAAATCCGGTGCCCCCAGCGTCTCCTTTCACCAGGCCTCCGAGCT
GCTTAGCACTACATACAGATTACAGCGGAACTC----------------------GGAGGATTTCTACCAAGATACCGAG
GCTGCTGAGAGTAAGAGTGTGGAGAATTTCGACCCATATAGCGAGGGCAGGAGTGT------TGAGAGTGAGAGTGAGGT
TGAGGGTGACGATGACTGTGGTGATGACGATGAGGAGATTGAGAGTGAGGTTGAGAGTGATGATGATTGTTATGATGATG
ACGAGGAGATTCCCAGCGAAATATGCAGTCTCACCAAGTACTTGAGATTTTGCTCTCGTTATGAGAACAAGTTGGCGCTG
ATTGAAAACGGAGAT------------------GAAGATAAAGAT------GAAGATGAGGATGAGGATGAGGATGGGGA
TGAAGATGAGGATGATGATGAGGAGGAGGAGGATAGACCCACATTGGAGTATCTCGAAAAGGTGATAGCTGATGAACAGA
AAAGTTTCGGCGAAGAATATGACTGCTGGGAACGTGTATGGGGTAGCAAGATTGGAGGGTGCGGTGGCTTGGAAGATACA
AGTAAAAAACTTCAATGCTACTCAGCTTACTCATCAACTAAATTTGTATCATCTGTTTGCTTCCATTTGTTACAAAATTT
TAGCAGATCACTAACTTCATTTCTCCTTGAATGT-------AGAAAAGATAATAGTTTACTCATTCATGTGAGATTTCTG
ACGGTTGACACTT-----TGTTGATGCAGCTACATTGAGCCCTATGTTCTTTACCCACTGCACACCTCGTGCCATCCCAT
CCCCTGCTGCTATTGCGGGGCGCACGTTGTTGATCTATTCCATCAGGATTTT------------GGAAAAGAAAGGAAAA
ACCTTGAAGTGGCCACTCAAAGTGTATGGTGTGATCGTTGCTCGAGACACGGTGGACCGCAACCGCAACATTATATTCTC
TCGATCAAGGCATAACTACCAAAAACTCGATAAACAAGTATGTACTATACATT-CAGTTTGCTCCTCATTTTTCTTTGTT
TCCTCTTCCTACTTTCCTAGTCCACTGGAGTGCTTTCCTAGGA----AATCATTGCAATCAAGAATAATGATATGATCCT
TGCAGGATTCTTCTCTATGCTTGACTGGACCATCTCGTGCAATTTTTGCTGTCGACACTGTTGACTTTGAAGTTGAACTC
AAAATAAATGAGGGGGCCGAAGAAGATACACCATTGATCAGTTCTTGCAACCACCTTTATGACAGTGCATATTATGATTT
AAATGTCCGTCAACTGAGGCCCGCAACTGTTGATAGCATCTCTTCAATATTCATCCGTGGCTGCTGGTGTGATGCAGAAT
TAACCTTTGCGCAGTTTGATACAGCCGTCCAGGCCACCATTGTGGGTGTTCACGTTGTTGAAGGGGGTTGGCCTTTCAAA
TGTGGATGCAAAGTTGCTTGCTCCTGGTCTGCTGCAACAAGGAATATCGGTCCCACTTCTAGGGAAGTTGTTTTGCTTGA
TTATCGTGGTGAAAATATGGATGTAGGATCAAATGGTTACCTTCATCTGTCGAGAAATGTTGTTCCAGTGGAGTTACAAG
GAACACTGAGGCTTGTCATACAGGCTTACCCGGAAGCTGGTTGTAAACCTGTAGAGGGTCATGTGGACTTCGGTGTCCAA
CATTGCCAAACAAGCAACCTATCATGTGAAGTTGACAACTCTACGGTCGAGGTTACTGTTGCTTGGTCCCTCCTTGTAAA
GGAAAAGTTGGATCTGTTGGTGGAGGGCTATGCCGCAGGGCGGGATTGAAAAAATTGAGTGTATTGATCCAACTATTTGT
GTACTGACTATAATAGGACTTGTTATGCTAGTGGTTTGTCAAAATCAAATTCTGCGTATATCAACCTGCTTGCACTCGAG
TGTTTGATTTGCATCGTTATTCTATCTAGTTTTCTTCCTTTCTTTTACCAACTTTCATTTAGCTTCATTTGGCAATATTT
TT-TATTTTGCTGTATGTATATTTGTGTGTTAGCGGGATTAAAACTCTTCGAGAGTGGTTACGGCTAGAGGCAAGTGGAT
TAAGGCCTTGTTTGGATGTGTGTCACTGTGTCATCAAGCAATCGATCACTGCTAG-------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------GGCCACGCCCATGCAAATTCTGAAG
CTGTTTGTGTGAAAGCATTTCACAAAGTGCCACTGTTCTATTCGATTCACAACAAAACTAGGGGTGACATTTTTTTGCAT
GATGTGACAGCGACCTGATCTTTCGATGAGAATGGGGATAACTATCGACTTGGTGAATTTTGATCTTGACGATCCGGCTA
TACCCCCCGATGATATGCCTTGACAATCGATAAACCTTTG----ATAGTTGTTGATCTTGCCATAGGCATGATCAACTTG
AAGAACGAGGTTCAAGTTCCTGCAAGAAACCAAAGAACTA----------------------------------------
--------------------GCAGGAATTATGATGAATTAGAATCTGAAATTGCAGATAATAAACTGAGCACACAAAAGA
TGAAAGAGTTCGGATCCCACTGTGGATTTAACAAGACGGCAGTCCTACATCAAGATGGGAACGGCGACGAGACCCTTCGG
GTTTTGCTTGGCCATCCTCCCACCGGCGAGAGAAACCCAAGCCTGTCCCCATCCCCAAATCTGTGCGCGGGGACAGTTTT
TTGCCCATCCGGTTTTCCGTACCCACGGGGAACCCATCCCGATGAACCATAAAAACAACAGCAACATTTGGGAGGGGACA
CTAGGAGGTAAGAAATTGGTGTGTGGATTTTAGAGTTTTTGGGGATGAGCATGCGATTTAGACGAGGGAGTGTG
>chr2B_1
GGCCTCACGTCATCCCGATGCTTCCCGGCGAGCGACCTTG---------------------------------CAGCATC
GGATGCTTCAGGCGAGTAGCCTTGCAGCACCGGTGCTTCGGTCGACGAGCGACCTCACAGCATCGATGCTTCCGGCGACC
AGCCTCGCGGCACCAGTGCTCCGGTCGGCGATAGCATCCGATGCTTCCGGCGCTGCCCCGTCATGGTCGTCGTCTCGTCG
ACGCGGTCGCAGCATCATCGCGGCCAGCGGCGTGGTTGCAGCATCGCCGCGGTTATTCGACTCCGGGGTCCGCGGCCATG
GACGCGCGCCTTTAGGCAGCATCGCCGTGGTTGTTCGACACCGTCACAGCACGCTTTTTGCGCCGTGGTCGTCGACATCC
CGCACCACCTGCAGCACTA----TCTCACGGCACCGGCACCCTCCTTTCTTGCAGCAGCTCACACGCGTAGCGTCCAGCC
CTGCAGCACCCGTCAACGGAAGCAGTCGTCGCCCTCAACCATGGTGGCCTAGAATGTCCGGTGGTGAG------------
---------AGAGACGAGAAGGGCGGGCGTTGAGACGTGCGGCTGGAAAGTGTTTCATCGGCATAACGAGGAAGAGGATA
AGCGGTGCGTGGGCCCTAGTGGACACGC-----------ATGGAGGCTGATGCGTTGGCTGTCTACATCCGGATGTACAG
AATCAGTTTCCGGGAGAGAGCCAGGAAGATTGGATCGGTGTCGTGAGGAAAAGTGGAGAAGGACGTGGGCTCGTGGGGTG
GGCAGTGGGACGACCGATCACGTAACAAAACCAG-AACCGATCGCATAACAGTACCGGAAAACTGCACGAGTCGTAGTAT
AAGTGCCCTCATCCGGCCGTCTCGTTGAAACCATAAAAGA-----CGATCAAGACGAGGACAGTTCCCTTGAACAACAAC
AAAAAAA-GATAATCTACGCGGCGGCGGCGCCCGCGAGTGCCCCAACGTG--AAGCCTGCTACCTCATCTTAACCCCGCG
AAACACCAGAGAGGAGAGCGACGGCCGGTGGCAAGGAGATGGAGAGAGGATCCGGCAAGGAAATCGACTGGGAATCCTGG
GCGATTAAGGACCGGATGAAGGAGATGGTATCCGTGGGGAGGGAGCGCGAAGACGTGCTTGACTCACTTACTCCTAGCCT
TTCTGGGTGGAGGCAGATACACAAAGGGGAAAGCAGTAAATCGTCGTGGATGATCGCCGGAAAAGCCGCCAAGGAAACGG
CGTCCGAACTGATGGAATCGGGCACAATGGAGCTACCCGAGAAAGAACTCGACAACATCTTGCAAGGTATGTAGGAGTTG
GGCCACCGGATGTTGTCTATGGCGTATTTTCTGCGGAAATCCGGTGCCCCCAGCGTCTCCTTACACCAGGCCTCTGAGCT
GCTTAGCGCTACATACAGATTACGGCGGAAATCCGGTGCCCCCAGCGTCTCCTTAGGAGGATTTCTACCAAGATACCGAG
GCTGCTGAGAGTAGGAGTGCGGAGAATTTGTACCCAGATACGGAGGGTAGCAGTGCTGAGAGTGAGAGTGAAAGTGAGGT
TACGGGTGACGATGATTGTGGTGATGACGATGAGGAGATTGGGAGTG------------------------ATGATGATG
ACGAGGAGATTCCCAGCGAAATCTGCAATCTCACCAAGTACTTGAGATTTTGCTCTCATTATGAGAACAAGTTGGCGCTG
ATTGAAAATGAAGAT------------------GAAGATGAAGACAAGGACGAGGACGAGGACGAGGATGAGAATGGGGA
TGAAGATGAAGATGAGAAT---------GAGGATATATCCGCATTGGAGTATCTCAAAAAGGAGATAGCTGATGAACAAG
AAAGTTTCGGCGAAGTATATGACTGCTGGGAACGTGTATGGGGTAGCAAGATTGGAGGGTGCGGTGGCTTGGAAGATACA
AGTAAAAAACTTCAATGCTACTCAGCTTACTCATCAATTAAATTTGTATCATCTGTTTGCTTCCATTTGTTACAAAATTT
TAGCAGATCACTAACTTCATTTCTCCTTGAATGT-------AGAAAAGATAATAGTTTACTCGTTCATGTGAGATTTCTG
ACGGTTGACACTTGTCTTTGTTGATGCAGCTACATTGAGCCCTATGTTCTTTACCCACAGCTCACCTCGTGCCGTCCCAT
CCCCTGCTGCTATTGCAGGGCGCACGTTGTTGATCTATTCCATCAGGATTCT------------GGAAAAGAAAGGAAAA
ACCTTGAAGTGGCCACTCAAAGTGTATGGTGTGATCGTTGCTCGAGACACGGTGGATCGCAACCGCAACATTCTATTCTC
TCGATCAAGGTGTAACTACCAAAAACTCGATAAACAAGTATGTACTATATATTTCAGTTTGCTCCTCAATTTTCTTTGTT
TCCTCTTCCTACTTTCCTAGTCCATTGGAGTGTGTTCCTAGGA----AACCATTGCAATCAAGAATAATGATATGATCCT
TGCAGGATTCTTCTCTATGCTTGACTGGTCCATCTCGTGCAATTTTTGCTGTTGACACTGTTGACTTTGAAGTTGAACTC
AAAATAAATGAGGGAGCCGAAGAAGATACAACATTGATCAGTTCTTGCAACCACCTTTATGACAGTGTA---TATGATTT
AAATGTCCCTCAATTGAGGTCCGCAACTGTTGATAGTATGTCTTCAATATTGATCTGTGGCTGTTGGTGTGATGCAGAAT
TAACCTTTGAGAAGTTTGATACGGCGGTCCAGGCCACCATCGTGGGTGTTCACGTTGTTGAAGGGGGTTGGCCTTTCAAA
TGTGGATGCAGAGTTGCTTGCTCCTGGTCTTCTGCAACAAGGAATATTGGTCCCACTTCTAGGGAAGTTGTTTTGCTTGA
TTATCGTGGTGAAAATATGGATGTGGGATCAAATGGTTACCTTCATTTGTCGAGAAATGTTGTTCCTGTGGAGTTACAAG
GAACACTGAGGCTTGTCATAGAGGCTTACCCGGAAGCTGGTTGTAAACCTGTAGAGGGTCATGTGGATTTCGGTGTCCAA
CATTGCCAAACAAGCAACCTATCATGTGAAGTTGACAACTCTACGGTCGAGGTTACTGTTGCCTGGTCCCCCCTTGTAAA
GGAAAAGTTGGATCTGTTGGTGGAGGGCTATGCTGCCGGGCGTGATTGAAAAAATTGTGTATATGGATCCAACTATTTGT
GTACCGACTATAATATGACTTGCTATGCTAGTGGTTTCTCAAAATCAAATTCCGTGTGTATCAACCTACTCGCACTCGAG
TGTTCGATTTGTTTCGTCTTTCTATCTAGTTTTGTTCCTTTCTTTTGCAAACTTTCATTTAGCTTCGTTTGGCAAGAATG
TTGTATTTTGCTGTATGTATATTTGTGTGTTAGCAGGATTAAAACTCTTTGAGAGTGGTTACGGCTAGAGGAGAGTGGAT
TAAGGCCTTGTTTGGATGTGTCTCACTGTGTCATCAATCAATCGATCACTGCAATTCCCTTTGCTTTCAATCTGTCTTGT
GCCACTCCAGCTTTCACTCAAGCCATTCTTTGCCTGTCGACCATCACTCTTCCTCTTGCTTCCTTAGGAAAGAGCATAAA
GAAGGCACCGAAAACAGGTGGGAAAGGAAAGGTATACTTTTGGTAGCCAACAAGCGGCCACGCTCATGCAAATTCTGAAG
TTGTTTGTGTGAAAGAATTTCACACAGTGCCACTGTTCTATTCGATTCACAACAGAACTAGGTGTGACATTTTTTTACTT
GATGTGACGGTGGCCCGATCTTTCGATGAGACTGGGGATAATTATCGATTTGGTGAATTTTGATCTTGATAATCCGGCTA
TACCACCGAATGATATGCCTTGGCAATCGATAAACCAATCTCCAATAGTTATTGATCTTGCCATAGACATGATCAACCTA
AACAATGTGGTTCAAGTTCCTGCAAGAAACCAAAGGATGATAAACTGAGCAAGAATTATGATGAATTATGATTGGCAAGA
ATTATGATGAATTATGATTGGCAAGAATTATGATGAATTGCAATTTGAAATTGCGGATAATAAACTGAGCACACAAAAGA
TGAAAGAGTTCGGATCC-ACTGTGGATCTAACAAGGCGGCAGTCCTACATCAAGATGGCAACGGGGATGAACCCGTT-GG
GTTTTGCATGGACATCCTCCCCCCGACGAGAGAAACCCAAACCCGTCCCCTTCTCCCAAACTATGCGCGGGGACAATTTT
TGGCCCATCCGATTTTCCGTACCCACAGAGAACCCATCCACATGAACGGTCATAAAAAA---AACATTTGGGAGGCGACA
CTAGGAGGTAAGAAATGGGTGCGTGGTTTTTAGA-TTTTTGGGGCTGAGCATGCGATCTAGATGAGGGAGTGTG
>chr2A_993
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------------------------------GCAAGGAGATGGAGAAGGGATCCGGCAAGGAGATCGACTGGGAATCCTGG
GAGATTAAGGACCGGATGAAGGAGATGGTATCCGTGGGGAGGGAGCGCAACAACGTCCTTGATTCTCTTACACCTAGCCT
TTCTGGGTGGAGGCGGATACACAAAGGCGAAAGCAGCAAATGGTCGTGGATGACCGTTGGAAAGGCCGCCAAGGAAACGG
AATCTGACTTGATGGACTCGAGCACAATGGAGCTACCTGAGAAAGAATTGGACAACATCTTGCAAGGTATGGAGCAGTTG
GGCCACCGGATGCTCTCTATGGCATATCTCTTGCGCAAACCAGGTGTCCCCAGCATCTCGCCTCACATGGTCACCGAGTT
GATTAATGCTACATCCAATTTGAGGCGAACTACT----------------------GAGGATTTCTACCAAGATACTGAT
GCTGCTGAGAGTTGGA------------------------------------GTGGTGAGAGTGAGGGTGAGGGTGA---
------TGACGAGGTTGAGGGTGATGACAAGGGTGAGATGCAGAAGGAGGATGG--------------------------
-------GATTCCTGGTGAAATCTCCAATCTTACTAAATACTTGAGGTTTTCCTCTCATTACGAGAACAAGTTGGCGCTG
ATTGTGGGCGAGGACGAGGACGAGGACGAGGACGAGGACGAGGACGAGGACGAGGACGAGGACGAGGATGAGGACGAGGA
CGAGGCTA---------------------AGGATAGATCCACATTGGAGTATCTCAAAAAAGAGATAGCCGATGAACAAG
AAAGTTTCGGCGATGAATATGACTGCTGGGAACGTGTATGGGGTAGCAAGATTGGAGGGTGCGGTGGCTTGGAAGATACA
AGTAAGCAACTCGAATGCTACTTATCTTA----TCAATTAAATTTGTTTCATCCGTTTGCTTTCTTTTGTCACAAGATTT
TAGTAGACCACTAACTTCGTTTCTACTTGAATGGAGAAGGGAGAAGAGATAATAATTTACTTATTCATATTAGTTCTCTG
ACAGTACACAATTGTCTTTTGTGCTGCAGCCACATTGAGCCCTATGCACTTTACACACTGCACACCTGGTGTTGTCCCAC
ACCCTGCTGCTGTTGCGGGGAACACCTTGTTGATCTACTCCATCAGGATTCTAAGAAAACACTTGGATATGACAGTCAAA
CCCTTGAAATGGCCGCTCAAAGTGTACGGTGTGGTTGCTGCTCGAGACACAGTGGACCACAACCGCAACATTCTCTTCTC
TCGATCAAGGCTAAACTACCAAAAACTCGGTGAAGATGTACATACCATATATT-CAATTTGCTCCTCATTATTCTTTATT
TCCTCTTCCTGCTTTCCTAGTCCACTGCAATTAAGCACCTTCCTAGTAACCACTGCAATCAAGTATAACAATATGATGCT
TGCAGGATTCCTTTTTATGCTTGACTGGTCCGTCTCGTGCAATTTTTGGTGTCGGACCCGTTGACTTTGAAGTTGACCTG
AAAATAAATGAGGGAGCTGAAGAAGATACAACATTGATCAGTTCTTGCTACCACCACCGCCCAAGAAGATTACTCAAAGG
TAGTAGTTACTCTGAAA---------------------------------TCATCCGTGGATGCTGGTGTGATGTAGAAT
TAATCTATGAGGAGCTTGATACACCACTCCAGGCCACCATTGTGGGTGTTCACGTTGTTGAAGGGGGGTGGCCTTTCAAA
TATGGATGCAGAGTTGCTTGCTCCTGGTCTGCTGCAACAGGGACTATTGGTGCTACCCGTAGGGAAGTTGTTTTGCTTGA
TTATCGTGGTGAAAATATGCCTGTAGGATCAGATGATTATCTTCATTTGCCGAGAAACGTTGTTCCCGTGGAGTTACAAG
GAACACTGAGGCTTGTCATACAGGCTTACCCAGAACCTGATTTTCGACCCGTAAAGGGTCATGTAGACTTCTGTATCCAA
CATTGCCAAACAAGCAGCCTACAATGTGAAGTTGGTAACTCTACAGTGGAGATTACTGTTGCTTGGTCCCTCCTTGTAAA
AGAGAAGCTGGAGCTGTTACTGGAGGGCTATGCTGCTGGGCGTGATTGAAGGAATTATATGTATT---------------
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>SNPs
--------------------------------------S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------
S--------S--------S-------------------------S-----------S-----------------------
-----------------------------------------------------------------------S--------
--------S-----------------------------------------------------------S-------S--S
------------S--------------------------S----------------------------------------
-------------------SSSS------------------------------S--------------------------
-------------------------------------------------------S----S-------SSSSSSSSSSSS
SSSSSSSSS-----S----------------------------------S-----------S--------S---------
S---------------------------SSSSSSSSSSS-------S---------------------------------
------------------------S-----------------------S----------S-------------S------
------------------------------S-SSS---------------------------------------------
-----------------------------------S--S-SSSSS----------SS----S------S-----------
--S----S----------------------S-S------------S----SS------------------S--S---S-S
---S------------------S---------------------------------------------------------
----------------------------------------S---------------------------------------
--------------------------S------------------S---------S----------S-------------
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-------S---------------S------S-------------------------------------------------
-------------S-----S---------SS-----S---SS-----S--S----S------------------------
-SS------------S----------------------------------S--SSSSSSSSSSSSSSSSSS---------
----------------------S----S-----------------------------S----------------------
----------S----------------------------S----S--------S--S-----S-----------------
---------S-----SS--SSSSSSSSS---------S-----------------S------S---------------SS
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-------------------------------------S------------------------------------------
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-------------------------------------------------------------------------S------
--------------------------------------------------S-----------------------------
------------------------------------------------------------------------S-------
-----------S-------------------------------------S------------------------------
--------------------------------SS---------------S------------------------------
----------------------------S---------------------------------------------------
--------------S---------------S------------------------------------S--SS--------
--------S----S-----S----------------S--S----------------------------------------
---------S-S-------------S------------------------------------------------------
----------S------------------------------------S--------------------------------
----------------------------------------------S-------------------S-------------
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---------------------------------S--S-----S--------------S----------------------
----S----------S------S--------------S--------------S-S--S---------S--S---------
----S------SS----SS--------------S------------S-S-----------------S--------S-S-S
----------------------------------S--------------S---------------------SS-------
---------------------S---------------S--------------S-S-------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------S----------------
S--------------S--------S-----------------------------S-------S-------------S-S-
--------S-S-S--S---------------S---------S------S--------------------SS---------
----S--SS-------------S-------------SS-S----------S---------------S----------S-S
--S--S-S---------------------------S-SS-----------------------------------------
-----------------------S---------------SS---S---------S-------------------------
-----------------S---------S-------S----------------------S-----S--S--SS--S--S--
-------S---S---------S---S--------------S--S------S--S--S--S--S------------S----
-S---------S--------------S-S----------SS------SS-S-S--S--SSSS-------------S----
----------------S----S----S-------S---------S------------S----S-----------
>forward_1063
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---AACCAGAGAGGAGAGCGACA---------------------------------------------------------
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>reverse_2891
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----------AAGTTGCTTGCTCCTGGTCT--------------------------------------------------
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>forward_1771
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-----------------------------------------------------------------------TTGGCGCTG
ATTGAAAACGG---------------------------------------------------------------------
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>reverse_3837
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----------------------------------------------------------------------------GCAT
GATGTGACAGCGACCT----------------------------------------------------------------
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