>input_sequence_37900
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-----------------------------------------------------------------ATGTCAGCCACTAGT
TTTGTATCGCTCTCTTTTTACTTTTGCATTTTGCTCTTGTGCCATGGCTCCATGGCACAACTATTTGGCATGAGCTTTAA
CCCATGGCAAAGCTCTCGCCAAGGGGGTTTCAGAGAGTGTACACTCAATAGGCTACAAGCATCTACACCACTTCGTCAAG
TGAGGTCGCAAGCAGGCCTAACCGAGTATTTTGATGAGGAAAATGAGCAGTTTCGTTGCATTGGTGTATTTGTCATCCGT
CGTGTAATCGAACCTCGTGGTTATTTGTTAC-GCGATACCACAACACTCATGGATTAGTCTACATCATCCAAGGTCTGTG
TAGCAATTCAATTAATGTAGTTACCATTTGAT------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------------ATTACTAATAGTTTCTT
GAGATAAAGGTTACTATTTTTAGTAT----TTTATCAATAAGTTTCTAACACTAACATGCACATATGTTTTCACCCAGGA
AGTGGTTCTGCCGGATTGTCTTTTACTGGATGCCCAGAGACATTCCAAAAACAGTTTCAAAAATATGGGCAAGCACAATT
CGTACAGGGTCAAAGCCAAAGCCAAAAGTTCAAAGATGAGCACCAGAAGGTTCACCGTTTCAAACAAGGAGATGTCATTG
CACTACCGGCAGGCATTGTACATTGGTTCTACAATGACGGTGATGCGCCAATTGTGGCTATCTATGTTTTCGACGTAAAC
AACAATGCTAATCAACATGAAACTAGGCATAAGGTAACAAAAAATCTTTGGGACAAATCTATGTGGGGTCAATAAGTCTA
TTCAACTAACCTACTGTATTTAATGTTGTTTAC-AAGTGGCATGTTGTTTAATTTCTCTTCTTGATCAAACTTGTAGGAA
TTTTTGTTGGCTGGCAACTATAGGAGTTCGCAACTTCACTCTAGCCAAAACATATTCAGTGGTTTCGATGTTCGGTTGCT
TGGTGAGGCCTTGGGTACAAGTGGAAAAATAGCGCAAAGGCTTCAAAGTCAAAATGAAATGGGTGACATAATCCATGTGA
ATCATACTCTTAAATTTATAAAGCCTATTTTTACACAACAGCGAGAGCAAGAATCCTACCCACACACTCAATATGAGGAA
GGGCAATCTCAGGCAAAACACTCTCAAGAAGAGCAACCTCAAATGGGGCAGTCTCACGGAGAGCAATCTCAAATGGGGTA
GTCTCACGGAGAGCAACCTCAAATGGGGCAGTCTCAAGGAAAGCACATTCAGGGAGAGCAACCTCAAATGGGGCAGTCTC
AGGGAAAACACTATCAAGGAGACCAACCTGAAGAAGGGCAGGGAGGGCAATCTCAAGAAGAGCAATCTCAGGCAGGGCCA
TATCCGGGATGTCAACCTCATGCAGGGCAATCTTATGCATCACAATCAACTTATGGTGGTTGGAATGGTTTGGAGGAGAA
CTTTTGTGATCATAAGCTAAGTGTGAACATCGACGATCCCAGTCATGCTGACATATACAACCCGCGTGCCGGTACAATAA
CACGTCTCAACAGCCAAACGTTCCCCATCCTTAACATCGTGCAAATGAGTGCTACAAGAGTACATCTCTACCAGGTAATT
ATGATATTGTGTT-TTTCATACTCTTATATGTTCAAAGCTTCACAATGCAATTCTAACATTACACCATACATAATTTGTG
ATCGTAGAATGCCATTATTTCACCATTATGGAACATTAATGCTCATAGTGTGATGTACATGATCCAAGGACATATCTGGA
TTCAAGTTGTCAATGACCATGGTCGAAATGTGTTCAATGGCCTTCTTAGCCCGGGACAACTATTAATCATACCACAAAAC
TATGTCGTTCTGAAGAAGGCACAACGTGATGGAAGCAAGTACATTGAATTCAAGACTAACGAAAACTCCATGGTTAGTCA
CATCGCAGGAAAGAACTCAATTCTCGGTGCCTTGCCCGTTGATGTCCTCGCCAATGCATTCGGCATCTCTAGGACAGAAG
CTCGGAGCCTCAAATTTACCAGGGAAGAGGAGCTGGGAGTATTTGCTCCTAAATTCAGTCAAAGTATCTTCGATAGTTTT
CCTAAGGGTGAAGAAGAGTCACCTTCAAAGTGCATGAACTAA--------------------------------------
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-----------------------------
>chr1B_1_TraesCS1B01G084300
ATGTTGGGTCAACAGCCCATAAGATAATTAAGAC---------------TACGGCCTCATTTGCGTGGAGATGCCTCTTC
TCTTTTAAACGGGAACAAAACAAGTGTGCATCTTTTCTACTCTAGTCTAGTCTAATAAAAACAGCGTTGGTAATGATGGT
ATGCCTGCCATCCTGCAATATAGGTCGTTCGATTTATATCTGACGGATAGGAAGGAAACTATTGCAATTTTGCAAAAAGG
TACCCACATCTCTCTCCACATTTGCAAATAAGGCCTTCCCTCGTTCATTCTTCTCTCTCACAAGATAAACTACTCATACA
AATGCATCTTGATGTTACGTGCAACGCATGAGCATCTTGCTAGTCCCTAAAAAAAGTTGTGATTAGTTTGCTCCAA----
TGCCTTTTCTTCTTATCTGAACTTTTCATATCTGCACTCCTTGTATCCAGATGGATAATGCATCATCGTGGAAAACTTCT
TTT-ATCCTTATCCTGA---TACGTATTAAGTGTGTGCCTACGTGGATGTGTGTCATCTAATATACACTACTTTGGCGAA
GCAAAATGTCATCATCACACAAGTGCAAAAGTATCCAAATGTATT-GTTATGCAGCAACTAAAGTGATGTTTCCAGTTAG
CGGTGCAATAAACAAACAAGCATAAAAGCGAGCACTAGACAGAAGTTGGTACAGATATGTTTTAGAAGTTTGTAAGTTAC
GTGAAAAAGAAACACTTAACCAACGTGTACGAAAACCTTTCTAGAAATAATGATGTAGATGATCGTTAAAGACAACACAG
AAAGCATTTTCTATGTTTGCTTGCAGTCATATATAACTTTAACTCATGAGAGTTGGTTAGAGCCACTCAACTTTCCAATT
GTCGAAATTATCATATGTTCTACATATTTATCTTAACAAATCTTGTATCTACATAAGTTCTAGGTAGATTTTGTT-GGCT
ATAAAAGCCACACACATCTCCCAACCCTAACATCAAGAAAACTTCTCTCTCCTCTTCAAACAGCTATGTCAGCCACTAGT
TTTGTATCGCTCTCTTTTTACTTTTGCATTTTGCTCTTGTGCCATGGCTCCATGGCACAACTATTTGGCATGAGCTTTAA
CCCATGGCAAAGCTCTCGCCAAGGGGGTTTCAGAGAGTGTACACTCAATAGGCTACAAGCATCTACACCACTTCGTCAAG
TGAGGTCGCAAGCAGGCCTAACCGAGTATTTTGATGAGGAAAATGAGCAGTTTCGTTGCATTGGTGTATTTGTCATCCGT
CGTGTAATCGAACCTCGTGGTTATTTGTTAC-GCGATACCACAACACTCATGGATTAGTCTACATCATCCAAGGTCTGTG
TAGCAATTCAATTAATGTAGTTACCATTTGAT------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------------ATTACTAATAGTTTCTT
GAGATAAAGGTTACTATTTTTAGTAT----TTTATCAATAAGTTTCTAACACTAACATGCACATATGTTTTCACCCAGGA
AGTGGTTCTGCCGGATTGTCTTTTACTGGATGCCCAGAGACATTCCAAAAACAGTTTCAAAAATATGGGCAAGCACAATT
CGTACAGGGTCAAAGCCAAAGCCAAAAGTTCAAAGATGAGCACCAGAAGGTTCACCGTTTCAAACAAGGAGATGTCATTG
CACTACCGGCAGGCATTGTACATTGGTTCTACAATGACGGTGATGCGCCAATTGTGGCTATCTATGTTTTCGACGTAAAC
AACAATGCTAATCAACATGAAACTAGGCATAAGGTAACAAAAAATCTTTGGGACAAATCTATGTGGGGTCAATAAGTCTA
TTCAACTAACCTACTGTATTTAATGTTGTTTAC-AAGTGGCATGTTGTTTAATTTCTCTTCTTGATCAAACTTGTAGGAA
TTTTTGTTGGCTGGCAACTATAGGAGTTCGCAACTTCACTCTAGCCAAAACATATTCAGTGGTTTCGATGTTCGGTTGCT
TGGTGAGGCCTTGGGTACAAGTGGAAAAATAGCGCAAAGGCTTCAAAGTCAAAATGAAATGGGTGACATAATCCATGTGA
ATCATACTCTTAAATTTATAAAGCCTATTTTTACACAACAGCGAGAGCAAGAATCCTACCCACACACTCAATATGAGGAA
GGGCAATCTCAGGCAAAACACTCTCAAGAAGAGCAACCTCAAATGGGGCAGTCTCACGGAGAGCAATCTCAAATGGGGTA
GTCTCACGGAGAGCAACCTCAAATGGGGCAGTCTCAAGGAAAGCACATTCAGGGAGAGCAACCTCAAATGGGGCAGTCTC
AGGGAAAACACTATCAAGGAGACCAACCTGAAGAAGGGCAGGGAGGGCAATCTCAAGAAGAGCAATCTCAGGCAGGGCCA
TATCCGGGATGTCAACCTCATGCAGGGCAATCTTATGCATCACAATCAACTTATGGTGGTTGGAATGGTTTGGAGGAGAA
CTTTTGTGATCATAAGCTAAGTGTGAACATCGACGATCCCAGTCATGCTGACATATACAACCCGCGTGCCGGTACAATAA
CACGTCTCAACAGCCAAACGTTCCCCATCCTTAACATCGTGCAAATGAGTGCTACAAGAGTACATCTCTACCAGGTAATT
ATGATATTGTGTT-TTTCATACTCTTATATGTTCAAAGCTTCACAATGCAATTCTAACATTACACCATACATAATTTGTG
ATCGTAGAATGCCATTATTTCACCATTATGGAACATTAATGCTCATAGTGTGATGTACATGATCCAAGGACATATCTGGA
TTCAAGTTGTCAATGACCATGGTCGAAATGTGTTCAATGGCCTTCTTAGCCCGGGACAACTATTAATCATACCACAAAAC
TATGTCGTTCTGAAGAAGGCACAACGTGATGGAAGCAAGTACATTGAATTCAAGACTAACGAAAACTCCATGGTTAGTCA
CATCGCAGGAAAGAACTCAATTCTCGGTGCCTTGCCCGTTGATGTCCTCGCCAATGCATTCGGCATCTCTAGGACAGAAG
CTCGGAGCCTCAAATTTACCAGGGAAGAGGAGCTGGGAGTATTTGCTCCTAAATTCAGTCAAAGTATCTTCGATAGTTTT
CCTAAGGGTGAAGAAGAGTCACCTTCAAAGTGCATGAACTAATGTCAGAACTAGCTCATGGAATAAAATAAAGACATCAG
TGAGTGTGTAGAACTTTGATGTTTCCATATATGGTCATCTCAATAAGATATCAACAAAGGTTCATTGTGTTTCATATGTT
TATCTTTCTGGAAGGAAATTTCATGAACTTCGTTTCGCAAATTGCATTAGCCAATTCTTCATCTAGACAGTGTGCATATT
TTATCGTATCTATACTGCTATTCTATGTGGTAGTGTTTGTCGTTTCTCACCGTAGCAATACAAATTCTCACTGTAGCAAT
GAACACCAATGTGTTTTTCTTTTGTGTTTGCACTGACATACACGTCACTCACTTGCTAACTAAGCCTAGTAAACACCAGT
GTGTGGTGGCTACGGTCAGCTTAATACATTCTTCTATGTGCCATTGGCCCCATTTCACTTGTGTTGTTTTCTGCAAAAAC
-CATATGGTCGTTGGGTGAGTAATTTCTCATTCATGCTTAAGACGAATGGACGATGATGTAGACTTGTAGCGTGCACTTG
AGTTCTTCCTTTGCAATTGGGTTTAAGTCTTTCTTTATGGGGAAATTAGGTCTGGGTACTATATCCAACTTATATTCGAT
GCCCGCCACTTTTTTTTTTGAAATTGTGGTTGTGCTTGTGCCACTAATGATTGCAAATAAATTGGGCACAAACCCTGTGC
GTCTGCCACCAA------------GTTTTCACCTCATTGCCACCTCCTTTGACCCATTTCTTATTCTGTGGGTCTCATTT
GTGG---------CAATAACGGAGGGGAGACTCATATGAAACATCCATTCGATGTGTTGGCCATCATTTGGCCACGTTGT
CAACTATGAACAGAAGAGCCAACATCAGCGCTCGAGCTCCTTCTCTTTCAGCTACCGCTGCACACCTAGTTTGGCCATTC
TAGACCATACATGTGCAGTTGCCACATGAAACCACCACGCCAACACTGTCGAGCCCGTTTGCCATCTCCGCGTGTCC---
--CGTGCCTTATTTCCCGCCAGAGGCCGC
>chr1A_1
ATGTTGGGTCAACAGCCCATAAGATAATTAAGACTGGACCTATTACTAATACGGCCTCATTTGCGTGGAGATGCCTCTTC
TCTCTTAAAAGGGAACAAAACAAGTGTGAATCTTTCCCTC----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------AAAAAAAGGTGTGATTAGTTTGCTCCAACAAG
TGTTTTTTCTTCTTATCTGAACTTTTCATATCTGCACTCCTTGTATCCAGATGGATAATGCATCATCATGGAAAGCTGCT
TTTTTTCCTTATCCTGA---TACGTATTAAGTGTGTGCCTACGTGGATGTGTGTCATCCAGTATACACTACTTTGGCGAA
GCAAAATCTCATCATCACACAAGTGCAAAACTATCCAAATGTATTTGTTATGCAGCAACTAAAGTGATGTTTCCAGTTAG
CGGTGCAGTAAACAAACAAGCATAAAAGCGAGCACTAGACAGAAGTTGGTACAGATATGTTTAAGAAGTTTGTAAGTTAC
GTGAAAAAGAAACACTTAACCAACGTGTACGAAAACCTTTCTAGAAATAATGATGTAGATGATCGTTAAAGTCAACACAG
AAAGGATTTTCTATGTTTGCGTGCAGTCATATATAACTTTAACTCATGAGAGTTGGTTAGAGCCACTCAACTTTCCAATT
GTCGAAATTATCATATGTTCTACATATTTATCTTAACAAATCTTGTCTCTACATAAGTTCTAGGTAGATTTTGTTTGGCT
ATAAAAGCCACACACATCTCCCAACGCTAACATCAAGAAAACTTCTCTCTCCTCTTCAAACAGCCATGGCAGCCACTGGT
TTCGCTTCGCTCTTTTTTTACTTTTGCATTTTGCTCTTGTGCCATAGCTCCATGGCACAACTGTTTGGCATGAGCTTTAA
CCCATGGCAAAGCTCTCGCCAAGGGGGTTTCAGAGAGTGTACATTCAATAGGCTTCAAGCATCTACACCACTTCGTCAAG
TGAGGTCACAAGCAGGCCTGACTGAGTATTTTGATGAGGAAAATGAGCAATTTCGTTGTGCTGGTGTATTTGTCATCCGC
CGTGTAATCGAACCTCGTGGTTATTTGTTACCACGATACCACAACACTCACGGATTAGTCTACATCATCCAAGGTTTGTG
TAGTAATTTAATTAATATAGTTACCATTTCATCGAAAATGCCTTTTGGAGCTCGGCCTCCATGGAGGCCGGTTTTTGAAA
AATACAAAAATCATGAAAATTCATATTTTTACAATTCAAAAAAATCTGAAAAAAATTACAGATATACATGGAGGCATAAC
ACACATGTGTGTAAATTTTTAGGACGAAATACGTTGAAATGAAGGCTGTGCAAAAAAGAAAAATCTGAGGCCTTTTAACA
CATGTTACTATTCATCCTCAAAGTCCAGAAATTTGTCTTTTTTCTATAGGTCGCATTTCGAAGTATTTCATCTTGAATTT
TTACACACACATGCATTTCATCCGTGTATAGTTACATATTTATTTTCAGAATTTTTTGAAGTCAAAAAGTTTGAATTTTG
AATTTTTCAAAAATAAAGGGCTCCATGGAGCTCGGTCACCAAAACGCCCTACTCCCATTTCATATTACTAATAGTTTCTT
GAGATAAAGGTTACTATTTTTAGTATTTTATTTGTCAATAAGTTTCTAATACTAACATGCAGATATGTTGTCACCCAGGA
AGTGGTTTCGCCGGATTGTCTTTTCCTGGATGCCCAGAGACATTCCAAAAGCAGTTTCAAAAATATGGGCAAGCACAATC
CGTACAGGGTCAAAGCCAAAGCCAAAAGTTCAAAGATGAGCACCAAAAAGTTCACCGTTTCAGACAAGGAGATGTCATTG
CACTACCGGCAGGCATTGTACATTGGTTCTACAATGACGGTGATGCGCCAATTGTGGCTATCTATGTTTTCGACGTAAAC
AACTATGCTAATCAACTTGAGCCTAGGCATAAGGTAACAAATGATCTTTGAGACAAATCTATGTGGGGTCAATAAGTCTA
TTCAACTAACCTGTTGTATTTAATGTAGTTTACAAAGTGACATGTTGTTTAATTTCTCTTCTTGATCAATCTTGTAGGAA
TTTTTGTTCGCTGGCAACTATAGGAGTTCCCAACTTCACTCTAGTCAAAACATATTCAGTGGTTTCGATGTTCGATTGCT
TGCTGAGGCCTTGGGTACAAGTGGAAAAATAGCGCAAAGGCTTCAAAGTCAAAATGA------TGACATAATTCATGTGA
ATCATACCCTTAAATTTCTGAAGCCTGTTTTTACACAACAACGAGAGCCAGAATCCTACCCACACACTCAATATGAGGAA
CGGCAATCTCAGGCAAAACACTCTCAGGAAGAGCAACCTCAAATGGGGCAGTCTCAG-----------------------
-------GGAGAGCAACCTCAAACGGGGCAGTCTCAGGGAAAGCACATTCAGGGAGAGCAACCTCAAATGGGGCAGTCTC
AGGCAAAACACTATCAAGGAGACCAACCTGAAGAAGGGCAGGAAGGGCAATCTCAAGAAGAACAATCTCAGGCAGGGCCA
TATCCGGGATGTCAACCTCGTGCAGGGCAATCTCATGCATCACAATCAACTTATGGTGGTTGGAATGGTTTGGAGGAGAA
CTTTTGTGATCATAAGCTAAGTGTGAACATCGACGATCCCAGTCGTGCTGACATATACAACCCGCGTGCCGGTACAATAA
CCCGTCTCAACACCCAAACGTTCCCCATCCTTAACATCGTGCAAATGAGTGCTACAAGAGTACATCTCTATCAGGTAATT
ATGATATTGTGTTTTTTCATACTCTTTTATATTCAAAGCTTCACAATGAAATTCTAACGTTATACCTTACATAATTTACG
ATCGCAGAATGCCATTATTTCACCATTATGGAACATTAATGCTCATAGTGTGATGTACATGATCCAAGGACATATCTGGG
TTCAGGTTGTCAATGACCATGGTCGAAATGTGTACAATGGCCTTCTTAGCCCGGGGCAACTATTAATCATACCACAGAAC
TATGTTATTATGAAGAAGGCACAACATGATGGAAGCAAGTACATTGAATTCAAGACTAATGCAAACTCCATGGTTAGTCA
CATCGCGGGAAAGAGCTCAATCCTCGGCGCCTTGCCCGTTGATGTCATCGCCAATGCATACGGCATCTCTAGGACAGAAG
CTCGAAGCCTCAAATTTAGTAGGGAAGAGGAGCTGGGAGTATTCGCTCCTAAATTCAGTCAAAGTATCTTCCATAGTTCT
CCTACCAGCGAAGAAGAGTCATCTTAAGAGCGCATGAGCTAATGTCAAAACTAGCTCATGGACTAAAATAAACACATCAT
TGAGTGTGTAGCACTTTGATGTTTCCATATATGGTCTTCTCAATAAGATATCAACAAAGGTCCATTGTGTTTCATATGTT
TACCTTTCTGGA----AATTTCATGAACTTTGTTTTGCGAGTTGCATTCGCGAATTCTTCATCTAGATAGTGTGCATATG
TTATCGTATTTGTACTACTATTCTATGTGGTAGTGGTTCTCGTTTCTCATTGTAGCGATACAAATTCTCACCATAGCAAT
AAACACCAATGTGTTTTTCATTTGTGTTTGCACTGACATAAACATCACTCACTTGCTAACTAAGCCTAGTAAACACCAGT
GTGTGGTGGCTACGGTCAGCTCAATACATTCTTCTATGTGCCATTGGCCCCATTTCACTTGTGTTGTCTTCTGCAAAAAT
-CATAT--------------------------------------------------------------------------
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-----------------------------
>chr1D_35
-------------------------------------------------TACGGCCTCATTTGCGTGGAGATGCCTATTC
TCTCTTAAACGGGAACAAAACAAGTGTGAATCTTTTCCCTCAA-------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------AAAAAAAGGTGTGATTAATTTGCTCCAACAAG
TGCTTTTTCTTCTTATCTGAACTTTTAATATCTGCACTCCTTGTATCCAGATGGATAATGCATCCTCGTGGAAAACTTCT
TTT-TTCCTTATCCTGATAGTACGTATTAAGTGTGTGCCTACGTGGATATGTGTCATCCGATATACACTACTTGAT-GAA
GCAAAATCTCATCATCGCACAAGCGCAAAAGTATCCAAATGTA-TTGTTATGCAGCAGCTAAAGTGATGTTTTCAGTTT-
------AGTAAACAAACAAGCATAAAAGCGAGCACTAGACAGAAGTTGGTACATATATGTTTGAGAAGTTTGTAAGTTAC
GTGAAAAAGAAACACTTAACCAACGTGTATGAAAACCTTTCTAGAAATAATGATATAGATGGTCGTTAAAGACAACACAG
AAAGGATTTTCTATGTTTGCGTGCAGTCATATATAACTTTAACTCATGAGAGTTGGTTATAGCCACCCAACTTTCCAATT
GTCGAAATGATAGTATGTTCTATACATTTATCTTAACAAATCTTGTCTCTACATAAGTTCTAGGTAGATTTTG-TTGGCT
ATAAAAGCCACACACATCTCCCAACGCTGGCATCAACCAAACTTCTCTCTCCTCCTCAAACAGTTATGGCAGCTACTAGT
TTCGCTTCGCTCTCTTTTTACTTCTGCATTTTGCTCTTGTGCCATAGCTCCATGGCACAACTGTTTGGCATGAGCTTTAA
CCCATGGCAAAGCTCTCGCCAAGGGGGTTTCAGAGAGTGTACATTCAATAGGCTACAAGCATCTACACCACTTCGTCAAG
TGAGGTCACAAGCAGGCCTGACCGAGTATTTTGATGAGGAAAATGAGCAATTTCGTTGTACTGGTGTATTTGCCATCCGT
CGTGTAATCGAACCTCGTGGTTATTTGTTACCGCGATACCACAACACTCATGGATTAGTCTACATCATCCAAGGTTTGTG
TAGTAATTTAATTAATATAGTTA---------------------------------------------------------
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------------------------------------------------------CCATTTCATATTACTAATAGTTTCTT
GAGATAAAGGTTACTATTTTTAGTATTTTATTTATCAATAAGTTTCTAATACTAACATGCACATATGTTGTCACCCAGGA
AGTGGTTTCGCCGGACTGTCTTTTCCTGGATGCCCAGAGACATTCCAGAAACAGTTTCAAAAATATGGGCAATCACAATC
CGTACAGGGTCAAAGCCAAAGCCAAAAGTTTAAAGATGAGCACCAAAAAGTTCACCGTTTCAGACAAGGAGATGTCATTG
CATTACCGGCAGGCATTGTACATTGGTTCTACAATGACGGTGATGCGCCAATTGTGGCTATCTATGTTTTCGACGTAAAC
AACTATGCTAATCAACTTGAGCCTAGGCATAAGGTAACAAATGATCTTTGAGATAAATCTATGTGGGGTCAATAAGTCTA
TTCAACTAACATGTTGTATTTAGTGTAGTTTACAAAGTGACATGTTGTTTAATTTCTCTTCTTGATCAATCTTGTAGGAA
TTTTTGTTCGCTGGCAACTATAGGAGTTCGCAACTTCACTCTAGTCAAAACATATTCAGTGGTTTCGATGTTCGATTGCT
TGCTGAGGCCTTGGGTACAAGTGGAAAAATAGCGCAAAGGCTTCAAAGTCAAAATGA------TGACATAATTCATGTGA
ATCATACCCTTAAATTTCTGAAGCCTGTTTTTACACAACAGCGAGAGCCAGAATCCTACCCACACACTCAATATGAGGAA
GGGCAATCTCAGGCAAAACACTCTCAGGAAGAGCAACCTCAAATGGGGCAGTCACAGGAAGAGCAACCTCAAATGGGGCA
GTCACAGGGAGAGCAGCCTCAAATGGGGCAGTCTCAGGCAAAGCACACTCAGGGAGAGCAACCTCAAATGGGGTGGTCTC
AGGCAAAGCACTCTCAGGGAGACCAGCCTGAAGAAGGGCAGGGAGGGCAATCTCAAGAAGAACAATCTCAGGCAGGGCCA
TATCCGGGATGTCAACCTCATGCAGGGCAATCTCATGCATCACAATCAACTTATGGTGGTTGGAATGGTTTAGAGGAGAA
CTTTTGTGATCATAAGCTAAGTGTGAACATCGACGATCCCAGTCGTGCTGACATATACAACCCGCGTGCCGGTACGATAA
CCCGTCTCAACTCCCAAACGTTCCCCATCCTTAACATCGTGCAAATGAGTGCTACAAGAGTACATCTCTACCAGGTAATT
ATGATATTGTGTTTTTTCATACTCTTTTATATTCAAAGCTTCACAATGCAATCTTAACGTTATACCTTACATAATTTATG
ATCGCAGAACGCCATTATTTCACCATTATGGAACATTAATGCCCATAGTGTGATGTACATGATCCAAGGACATATCTGGG
TTCAGGTTGTCAATGACCATGGTCGAAATGTGTTCAATGACCTTCTTAGCCCGGGGCAACTATTAATCATACCACAGAAC
TATGTTGTTCTGAAGAAGGCACAACGTGATGGAAGCAAGTACATTGAATTCAAGACTAATGCGAACTCCATGGTTAGTCA
CATCGCAGGAAAGAACTCAATTCTCGGCGCCTTGCCCGTTGATGTCATCGCCAATGCATACGGCATCTCTAGGACAGAAG
CTCGAAGCCTCAAATTTAGCAGGGAAGAGGAGTTGGGAGTATTCGCTCCTAAATTCAGTCAAAGTATCTTCCGTAGTTTT
CCTAACGGCGAAGAAGAGTCGTCTTAAGAGCGCATGAGATAATGTCAAAACTAGCTCATGGACTAAAATAAACACATCAT
TGAGTGTGTAGCACTTTGATGTTTCCATATATGGTCGTCTCAATAAGATATCAACAAAGGTCCATTGTGTTTCATATGTT
TATCTTTCTGGA----AATTTCATGAACTTTGTTTTGCAAGTTGCATTCATGAATTCTTCATCTAGATAGTGTGGATATG
TTATCGTATTTGTAC-ACTATTCTATGTGGTAGTGTTTTCGGTTTCTCACTATAGCAATAAAAATTCTCACCATAGCAAT
AAACACCAATGTGTTTTTCGTTTGTGTTTGCACTGGCATACACGTCACTCACTTGCTAACTAAGCCTAGTAAAAAGCAGT
GTGTGGTGGCTACGGCCAGCTCAATACATTCTTCTATGTGCCATTGGCCCCATTTCACTTGTGTTGTCTTCTGCAAAAAG
TCATATGGTTGTTGGGTGAGTAATTTGTGGTTCACCCTTAAGACGAATGAAGGATGATGTAGATTTCTAGTGTGCCCTTG
AGTTCTTCCTTTGCAATTGGGTTCAACTCTTTCTATATAAGGAAATTAGGTCTGGCCATTATCCAACTTG-ATATTTGAT
GGCCGCCACTTTCTTTTT-GAAATTGTG--------TGTGCCACTAACGATTGCAAATAAATTGGGCACAAGCCCTGTGC
GTCGTTAGAGCAAGTTGCCGCCGGGTTCTCACCTCATTGCCACCTCCTTTGACCCATTTCTTCTTATGTGAGTCTCATTT
GTTGCCACGTCTTCAATAACAGAGGGGAGACTCATATGAAACATCCATTTGATGTGTTGGCCATCATTTGGCCACGTTGT
GAACAATGAATAGGAGAGCCAACATCAGCGCTCGAGCTCCTTCTCTTCCAGCTACCGCCGCACACCAA-TTAGGCCATTC
TAGACCCTACATGTGCA---------------------------------------------------------------
-----------------------------
>chr1D_2888
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----------------------------------------------------------------------TGGTTAGTCA
CGTCGCAGGAAAGAACTCAATCCTCGGCGCATTGCCCGTTGATGTCATCGCCAATGCATATGGCATCTCTAGGACAGAAG
CTCGAAGCCTCAAATTTAGCACGGAAGAGGAGCTGGGAGTATTCACTCCTAAATTCAGTCAAAGTATCTTCCATAGTTTT
CCTAACAGCGAAGAAGAGTCATCTTAAGAGCGCATGAGCTAATGTTAGAACTAGCTCATGGAGTAAAATAAACACACCAT
TGAGTGTGTAACACTTTGATGTTCCCATATATGGTCATCTCAATAAGTTATCAACAAAGGTTCATTGCGTTTCATATGTT
TATCTTTTTGGA----AATTTCATGAACTTTGCTTTGCAAGTTGCATTCGCGAATTCTTCATCTAGATAGTGTGCATATG
TTATCGTTTTTGTACTACTATTCTATGTGGTGGTGTTTGTCGTTTCTCATTGTAGCAATAAAAATTCTCACCATACCAAT
AAACACCAATGTGTTTTTCGTTTGTGTTTGCACTGGCATACACGTCACTCACTTGCTAACTAAGCCTAGTAAAAACCGAG
T-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------
>chr1A_3539
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--ATATGGTCGTTGGGTGAGTAATTTCTCATTCGCGCTTAAGACGAATGAACGATGATGTAGATTTGTAGAGTGCCCTTG
AGTTCTTCCTTTGCAATTGGGTTCAACTCATTTTTTATGTGGAAATTAGGTCTGGCCACTATCCAACTTG-ATATTTGAT
GCCCGCCACTTTTCTTTT-GAAATTGTGGTTGTG-------CACTAACGATTGCAAATAAATTGGGCAGAAGCCCTGTGC
GTTTGCCACCAA------------GTTTT-----------CACCTCATTTGACCCATCTTTTCTTTTGTGAGTCTCAATG
CTGG---------CAATAACGGAGGGGAGACTCATATGAAACATCCATTCGATGTGTTGGCCATCATTTGGCCATGTTGT
CAACTATGAATATGAGAGCCAACATCAGCGCTCGAGCTCCTTCTCTTCCAGCTACCGCCGCGCACCTAGTTAGGCCATTC
TAGACCCTACACGTGCATTTCCCACCTGAAACTGCCACGCCACCACCGGCGAGCCCGTTTGCCATCTCCGCGTGTCCTTT
CACGTGCCTTATTTTCCGCCAGAGGCCGC
>SNPs
--------------------------------------------------------------------------------
---S------------------------S--------SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------S-----------------------
---S----------------------------------------------------------------------------
----S-----------------------------------------------------S---------------------
-------S------------------------------------------------------------------------
-------S------------------------------------------------------S-----------------
--------------------------------------------------------------------------------
----S---------------S-----------------------------------------------------------
----------------------------------------------S---------------------------------
-------------------------S------------------------------------------S-----------
--S-SS---------------------------------------S----------------S-----------------
-------------------------------------------S------------------------------------
-------S-----------S-----------------------------S--------S-S-------------------
---------------------------------------------------------------------------S----
---S----S-------S------------S--------------------------------------------------
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-------------------------------------------------S-------------------S----------
-------SS---------------S------------------------------------------------------S
---------------------------------------------S--S-------------S-----------------
--------------------------------------------------------------------------------
---S------------S---SS-------------------SS-------S-----------------------------
------------SS------------S------------S-----------------------------S----------
--------S-----------------------------------S-----------------------------S-----
--S------------------------------------------------------SSSSSS---------S-------
-------S---------S-S------S---------------------S-------------------------------
--------------------------S-----------------------------S-S-------S-----------S-
---S--S-----------------------------S-------------------------------------------
---S---------------------------------------------------------S------------------
---------------------------------S----------------------------------------------
--------------------------------------------S-----------------------------------
-S----------S-------------------------------------------------------------------
--------------------------S---S---------------------------S---S---S----------S--
----S--------------------------------------------------------------------------S
----S--------------------------------------------------S--------------------S---
-----S-----------------------------------------------------S-S------------------
---------------------------S------------------S------------S--------------------
----S-------------S------------------------S---------------------------S--------
-----S--S------------S---S-S--S------S------------------------S---------S------S
-----------S--------------------------------------------------------------------
------------SSSS--------------S----S----S-------S--S---------------S-----------S
---------S-S----S---------------------------------S--------------------SS-------
S------------------S------------------------------------------------------------
---------------------S---------------------------------------------S-----------S
----------------------------------S--------------S-------------S------S----S----
-----------------------S--S------------S---------------SS-----SSSSSSSSS-----S---
------------------S---------------SS-----------S-----------------------S--------
--------------------------------------------------------------S--S----S---------
--------------------------------------------------------------------------------
----------S--S---------------------------------S----------S------------S--------
------S----------S--S----S------SS--------S---S-S-------------------------------
--------------S--------------
>forward_175
--------------------------------------------------------------------------------
---------------------------------------------------------------------------ATGGT
ATGCCTGCCATCCTG-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------
>reverse_2000
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------T
CGTACAGGGTCAAAGCCAA-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------
>forward_359
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------TGCAACGCATGAGCATCTTG-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------
>reverse_2644
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---TCACGGAGAGCAACCTCAAA---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------
>forward_2627
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------GCAGTCTCACGGAGAGCAAT-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------
>reverse_4459
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------TGCACACCTAGTTTGGCCAT--
--------------------------------------------------------------------------------
-----------------------------
