>input_sequence_37870
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--------------------------------------------ATGGCCAACAGTAGTTCACCGGGCTGCGTTCTCCTG
GCGGCGACAATGGCGCTGGGCGTAGTCCTTCTGG---CGTCGCCG---GCGGAGTCCGCACGCGCCTTCTTCGTGTTCGG
TGACTCCCTGGTGGACAACGGCAACAACAACTACCTGATGAGCACGGCGCGCGCCGACTCGCCGCCGTACGGGATTGACT
ACCCCACGCACCAGGCCACCGGCCGCTTCTCCAACGGCCTCAACATCCCGGACATCATCAGTACGTAC---TACGTGACG
A-----------CCACTGCCATTGATTAGCTAGTGCATGG---CGCAATTAATGTA------------GATGT-------
CGTCTCAGGTGAGCATCTGGGCGCGGAGCCCACGCTGCCGTACTTATCCCCGGAGCTCCACGGCGAGAAGCTGCTCGTGG
GCGCCAACTTCGCGTCGGCGGGCGTCGGCATCCTCAACGACACGGGCATCCAATTTGTACGCGCGACACGAATTCATCTC
TAGTTCTGTCA------------AATTTACAAGTTTGTG-----CAAAAAAGAGT-------------------------
---------ACTAATATCTCAATCAACCATACTGGTAAACCATGGGATCTACTCGTAC----ACAGATTGAGATGGTGAG
GATGAGCAGGCAGCTGCAGTACTTCCATGAGTACCAGGGGAAGCTGCGCGCGGTGGTGGGCGCGTCCCAGGCGACGCAGA
TCGTGAGCAGGGCGCTGGTGCTCATCACCCTCGGCGGCAACGACTTCGTCAACAACTACTTCTTCATGCCCTTCTCCCTC
CGCTCGCTCCAGTTCTCTCTTCCCAACTACGTCCGCTATCTCATCTCTGAGTACAAGAAAATCCTCGTGGTAACACCATT
TGT--ACTTTCTGTCTGTATTTCGTTCGTTTCTTTTCCGGAAACGCTAAAAATCAAACGTTATATTTTTAGCCATGGCAA
ATCTGACGTTTTTTATGGCAATTTATGTTGACGGATGATTGCAAATTTAATTTGCAAGCACTGCAATTTTTTAGCCAAAA
GATAAACTGAGACGGATTTGTCATGCTCGCCGACTAAACTTTGCCATCCTGGAAGAACATAATTTATCATAAAAAAAATC
GATTTGCTATGGTCAAAAATCTTAATTTGTAGTGGAGTCCATTTTACTCCGCATATAAGACTTATATATGCAAAATACAA
AGGTGAGCATGGTTTCACGCGCACCCACGTGAATAGTAAGTTCAAAAAATATACTAGGAAAATTGAAAAAATTTCTAAAA
TTTTGGGTTAATAAACTTGTCAACCATTCTACTCCAATGTGAAAATAAATACAATTGAGACCTTACTATTCATTAAATAG
CGTTTCTTAATATAGCTTCGATTTTTCCATTTTTGTCCAGAATAATAATGATGTGTTTTCTTTGTGAAACTTCATACATG
GATATATCGGTTGAATAAGTATGCTACAAAAAATATTTAGATTTTATTGATTTTTTCTAGTATTTTTTTCGAATTTATTA
TTCTTAAGGAGTGAGCG-----AAAACCATGTTCACCAAATACACGTTCT-----------TTATATACGGAGTAAAAAG
A--------------------------------------------AACGAAGTACTAACAAGGTTCCCCTAAAAAAAGGT
ATTAACAAGGT--TGACAAGCACCAGCTAACATGTACATACGCTGGA--ATGT-ATGCAGAGGCTGTATGATATGGGCGC
ACGACGTGTGCTGGTGACGGGGACAGGCCCGCTAGGTTGCGCGCCGGCGCAGCTCGC---CCGGAGCCGCGGCGGGGAGT
GCGACGCCGGCCTGATGCGCGCCGCGGAGCTGTTCAACCCGCAGCTGTCCCGGGCCCTGCAGGAGCTCAACGCGCGCTAC
GGCAGCGGAACTTTCATCGCCGCCAACACCTTCCGCATCCACTTCGACTTCATCAGCGACCCGGCAGCGTACGGGTTCCA
GACGGCCACGGAGGCATGCTGCGGGCAGGGGCCGCACAACGGGATCGGGTTGTGCACCGCGCTATCCAACGTCTGCACCG
ACAGGGACCAGTACGTGTTCTGGGACGCCTACCACCCAACTGAGCGCGCCAACCGGATCATCGTCAGCCAGTTCATGACC
GGCTCGCTCGACTACATCAGCCCGCTTAACCTCGGCACTGCCCTCCACATAGACGCCGCCCTAATGGATTGA--------
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--
>chr2A_1_TraesCS2A01G045800
ACACTGGTGTTTTTAGAAATTTACTGGTATCATATCAGTCTGAGTGAACTTTGTAAGTATTTTTTTTTTTAGAAATTTAC
TGGTAAACCCTCCTTCTATAAAGCTAAGGTACGCCTTTGGCGTACCCACACACAAAAAAAAAGAAATTTACTGGTAAAGG
AAAAGAAAGACAAATATATGCATTCAAATGGGCTTGCTTTTTTTCTTTTCGGGCTGGGATTCATGAGGGCTTTCAAACAA
GATCCTTTTGAATACATTTTGATAAATTTTGAAAAAAATGTTAAGTTTCAACACTTGAAACTTAGTACAAGTGGTAAATA
AAATCACGAGTTTGGTACCTGCGATCAACAAAAAAATCGCCTAAAGTTCCAACTCTGAAACTTGATACTGATGACTGAGA
AAATCATATTTTTCAGATGCAAAATTGTAAGTTCCTACTATTTAATCTTAAAACTTACTGTGCACTCGTGCGCGATCCAA
CTATATACTTCAAGAATCGCGATGCAATTGAGTGGCTGGGCGGGGCTTGGCAGGTGTTTGCCCTTGTGAATCTTCGATAT
AGAACTGAGTAGATGATCTCCACTGACATATTTATCTCAACATCCAACTATATCATCACAGCATGTGTGCAGGCGGAAAG
GTCTATCTCAGCATGTAAAAATGTTTTCATTATAGTATACGATTTTATGTTCATTACTTATTATTTTATAATTATGCAAT
GGCCCTATATATTTAGGACTGAGTAGATGATCTCCTTACCAGAACGCTTTTCCTGGTTCAGAAGAATAAGATACTCACCC
GCAAAAAAAAAAAGAGTAAGATACTGAAATTGTCTAGTAAATTTGATGCGAACATTCTGCTGGGCTCCTCTATATATGTA
CACAGGCCTCTTTAGCTTGAAGGCAGCCAGACCGGTCTCGTGCATTGCCCACTACATGTCGT----GGGGGTGAATCAAG
GGATCGATGCAAGATTTGCCTCGACCGATCAGTTCACGGTGACGATGGCCAACAGTAGTTCACCGGGCTGCGTTCTCCTG
GCGGCGACAATGGCGCTGGGCGTAGTCCTTCTGG---CGTCGCCG---GCGGAGTCCGCACGCGCCTTCTTCGTGTTCGG
TGACTCCCTGGTGGACAACGGCAACAACAACTACCTGATGAGCACGGCGCGCGCCGACTCGCCGCCGTACGGGATTGACT
ACCCCACGCACCAGGCCACCGGCCGCTTCTCCAACGGCCTCAACATCCCGGACATCATCAGTACGTAC---TACGTGACG
A-----------CCACTGCCATTGATTAGCTAGTGCATGG---CGCAATTAATGTA------------GATGT-------
CGTCTCAGGTGAGCATCTGGGCGCGGAGCCCACGCTGCCGTACTTATCCCCGGAGCTCCACGGCGAGAAGCTGCTCGTGG
GCGCCAACTTCGCGTCGGCGGGCGTCGGCATCCTCAACGACACGGGCATCCAATTTGTACGCGCGACACGAATTCATCTC
TAGTTCTGTCA------------AATTTACAAGTTTGTG-----CAAAAAAGAGT-------------------------
---------ACTAATATCTCAATCAACCATACTGGTAAACCATGGGATCTACTCGTAC----ACAGATTGAGATGGTGAG
GATGAGCAGGCAGCTGCAGTACTTCCATGAGTACCAGGGGAAGCTGCGCGCGGTGGTGGGCGCGTCCCAGGCGACGCAGA
TCGTGAGCAGGGCGCTGGTGCTCATCACCCTCGGCGGCAACGACTTCGTCAACAACTACTTCTTCATGCCCTTCTCCCTC
CGCTCGCTCCAGTTCTCTCTTCCCAACTACGTCCGCTATCTCATCTCTGAGTACAAGAAAATCCTCGTGGTAACACCATT
TGT--ACTTTCTGTCTGTATTTCGTTCGTTTCTTTTCCGGAAACGCTAAAAATCAAACGTTATATTTTTAGCCATGGCAA
ATCTGACGTTTTTTATGGCAATTTATGTTGACGGATGATTGCAAATTTAATTTGCAAGCACTGCAATTTTTTAGCCAAAA
GATAAACTGAGACGGATTTGTCATGCTCGCCGACTAAACTTTGCCATCCTGGAAGAACATAATTTATCATAAAAAAAATC
GATTTGCTATGGTCAAAAATCTTAATTTGTAGTGGAGTCCATTTTACTCCGCATATAAGACTTATATATGCAAAATACAA
AGGTGAGCATGGTTTCACGCGCACCCACGTGAATAGTAAGTTCAAAAAATATACTAGGAAAATTGAAAAAATTTCTAAAA
TTTTGGGTTAATAAACTTGTCAACCATTCTACTCCAATGTGAAAATAAATACAATTGAGACCTTACTATTCATTAAATAG
CGTTTCTTAATATAGCTTCGATTTTTCCATTTTTGTCCAGAATAATAATGATGTGTTTTCTTTGTGAAACTTCATACATG
GATATATCGGTTGAATAAGTATGCTACAAAAAATATTTAGATTTTATTGATTTTTTCTAGTATTTTTTTCGAATTTATTA
TTCTTAAGGAGTGAGCG-----AAAACCATGTTCACCAAATACACGTTCT-----------TTATATACGGAGTAAAAAG
A--------------------------------------------AACGAAGTACTAACAAGGTTCCCCTAAAAAAAGGT
ATTAACAAGGT--TGACAAGCACCAGCTAACATGTACATACGCTGGA--ATGT-ATGCAGAGGCTGTATGATATGGGCGC
ACGACGTGTGCTGGTGACGGGGACAGGCCCGCTAGGTTGCGCGCCGGCGCAGCTCGC---CCGGAGCCGCGGCGGGGAGT
GCGACGCCGGCCTGATGCGCGCCGCGGAGCTGTTCAACCCGCAGCTGTCCCGGGCCCTGCAGGAGCTCAACGCGCGCTAC
GGCAGCGGAACTTTCATCGCCGCCAACACCTTCCGCATCCACTTCGACTTCATCAGCGACCCGGCAGCGTACGGGTTCCA
GACGGCCACGGAGGCATGCTGCGGGCAGGGGCCGCACAACGGGATCGGGTTGTGCACCGCGCTATCCAACGTCTGCACCG
ACAGGGACCAGTACGTGTTCTGGGACGCCTACCACCCAACTGAGCGCGCCAACCGGATCATCGTCAGCCAGTTCATGACC
GGCTCGCTCGACTACATCAGCCCGCTTAACCTCGGCACTGCCCTCCACATAGACGCCGCCCTAATGGATTGATATACTCC
ACATAATACTAGTATGATGCCAAAGCTAGGAAGCAGTACACTTACTGCCTAGCTAGATATATATAAAATGGTTGTTTATG
TTTAATGCGATCATTGAAAACCAATGAAAAAAATAGCGTGCTACAGCAAAATAGTGCCGATCTCAAAATATGCTAGTATT
AGCGTGCTATATCGCGCTATAACGTGCTATTAGCGAGACGTTGTACACGGATATACATAGCGAGGCAATTCTCAATATGC
TATAGCGTGCTATTAGCGACGCTATAGTGCGCTATTTTTTTCAGTGTTGAAAACTTGAACATTGGAGAGATTGCTTTGCC
-------ATGTCGACATTTTAACTGGGCTAATAAACGTAAGGTTCCCACTTATGAAAAATTTGATCGTATATTGACGAGC
TTTGAGTGGGAGCAGAAGTCCCATCTGGTGATTGTTCGAGCCCTCCACATAAGTACTTTTGACAATACTTCTCTTGTTTT
GGACTCCGTGCGGCAG-CTCATTTCTGTAACAAGGGTGCTTTCTCTTTCGAAACATCTTTGGTTTAAAAGGGAAGGGTTG
CAACATTTGGTATCTCAAATGGTCCAAGGAAACGAGAGGTTCACCTAATATTGAGAATTGGTAGTTCATTATTCCTCATC
TCAAGCAGTTTCTTTAGGGTTGGACGAAGAATCTGAGTGC----------------------------------------
--CGCTTTACATATCAAGGACGAATCATCACCCCTCTGCATAGCCAACTTAGGGCATTTCTAACTGTTCCCCCTAAAAGA
CCATAAGAGAATAAAGTTTCTGGTTTACTCCCTTAAGGCGCACCTAGCCGATCCCTTATCCGGCTTAGTGGAGTAGATTT
TTTACTCCTCCATATTTCCCCAAAAAAATTCCTAAATTAATGTCATCCCGCCACGGCGGAGTAAAACTGGCGCCTCTCCC
TCTCGCCCCTCCCGCGCCGCACTGTCTCGCGCCGACGCAGCCGCCACACCCCGCCGCCACCGCCGATGACTGCCGGGCTG
GC
>chr1D_868
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-------------------------------------------------------------------CTCTCTATATATA
AT-AGGCCTCTTGAGCCCGAGTCCATCCAAACCGGTCTCGTGCATCGCCCACTAGCTAGCGTACGTGACGATCGATCAAG
CGACCGGTGCAC----TGCCTCGACCGATCAGTTCACGACGACGATGGCCGGCGGTGCGTCGGCCCT-------------
--GGCGATCATGGCGCTGGGCGTCCTCCTCCTGG---CGGCGCCG---TCGGAGTGCGCGCGCGCCTTCTTCGTGTTCGG
CGACTCCCTGGTGGACAACGGCAACAACAACTACCTGATGACGACGGCGCGCGCCGACTCGCCGCCGTACGGGATCGACT
ACCCCACGCACCAGGCCACCGGGCGCTTCTCCAACGGCCTCAACATCCCGGACATCATCAGTACGT--------------
---------CTGCCATTGATTTTGATTAGCCAGTGCATGCTCGCGTAATGTGTGTACATGTTGGATCACGTGCGTGCGTG
CGTCTCAGGTGAGCAGATCGGCGCGGAGCCCACGCTGCCGTACCTGTCCCCGGAGCTCCACGGCGCGAAGCTGCTCGTGG
GCGCCAACTTCGCGTCGGCGGGCGTCGGCATCCTCAACGACACCGGCATCCAATTCGTACGCACGGCACGAATTGACATC
TTCAGTCTCGCTAATAAT--TAGATTAGACAAGCTTCCCCGTACCAAAAATGAGC-------------------------
---------ACTTATACTAGTTATA---ATATGCATGCATTTGGACGGTGGTG----------CAGGTGAACATCGTGAG
GGTGAGCCGGCAGCTGCACTACTTCGGCGAGTACCAGGGGAAGCTGCGCGCGCTGGTGGGCGCGTCCCAGGCGACGCAGA
TCGTGAACCGGGCGCTGGTGCTCATCACCCTCGGCGGCAACGACTTCGTCAACAACTACTACCTCATCCCCTTCTCCCTC
CGCTCCCGCCAGTTCTCCCTCCCCGACTACGTCCGCTACCTCATCTTCGAGTACAAGAAGATCCTCATGGTATGGTAA--
--CAC--------------------------CTCTGCAC-----------------------------------------
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--CTTCCGGCAACACCA-----CTAACCAGGTAGGTAGAC--C-------------------------------------
--------------------------------------------------------------------------------
--------------GACGAGCACCGGCTGACACGTACTCCCGTTGGATGCATGCATGCAGAGGCTGTACGACATGGGCGC
GCGGCGCGTGCTGGTGACGGGGACGGGCCCGCTGGGCTGCGCGCCGGCGGAGCTCGCGCTCCGCAGCCGCGACGGGGAGT
GCGACAGGGACCTGATGCGCGCGGCGGAGCTGTTCAACCCGCAGCTGTCCCAGGCCCTGGAGGAGCTCAACGCGCGCTAC
GGCGACGGGACCTTCATCGCCGCCAACTCCTTCCGCGTCCACTTCGACTTCATCAGCGACCCGGCGGCGTACGGCTTCCG
GACGGCCAAGGAGGCGTGCTGCGGGCAGGGGCCGCACAACGGCGTCGGCCTCTGCACGGCGGTGTCCCGCCTCTGCGCCA
ACAGGGACCAGTACGTGTTCTGGGACTCGTACCACCCCACGGAGCGCGCCAACCGGATCATCGTCAGCCAGTTCATGACC
GGCTCGCTCGACTACGTCAGCCCGCTCAACCTCAGCACCGCCCTGCACATCGACGCCAGCCTCATGGACTGATGATA---
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--
>chr2B_878
GTACAA--------------------------------------------------------------------------
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-----GCCTCTTCAGCCCGAGGTCATCCAAACCGGTCTCGTGCATTGCCCACTATATATCGTACGTGAGGATCGCTCAAG
GGACCGATGTAAGGTTTGCCTCTACCAATCAGTTCACGGTGACGATGGCCAAGACTAGTTCATCGAGCTGCCTTATGCTG
GCAACGACAATGGCGCTGGGCGTAGTCGTCCTGC---TGGCGACGCCATCGGAGTGTGCGCGCGCCTTCTTCGTGTTCGG
CGACTCCCTGGTGGACAACGGCAACAACAACTACCTGATGAGCACGGCGCGTGCCGACTCGCCGCCGTACGGGGTCGACT
ACCCCACGCACCAGGCCACCGGCCGCTTCTCCAACGGCCTCAACATCCCGGACATCATCAGTACGTACCACTATGTGACG
A-----------CCATTGCCATTGATTAGCTAGTGCATGG---CGCAATTAATGTA------------GT----C----G
TGTCTCAGGTGAGCATCTCGGCGCCGAGCCCACGAGCATCA---------------------------------------
----------------GGCGGGCGTCGGCATCCTCAACGACACGGGCATCCAATTTGTACGTGCGACACAAATTCATCTC
CAGTTCAATCA------------ATTTGACAAGCTTGTT-----CAAAATAGACTTGTCGTTAGAATAGGGATTTGCCAT
TTTCTCAGCAATAATTTCTCAATCAACTCCTTAACCGTCGGATC-----------AACACATACAGATGGAGATGGTGAG
GATGAGCAGGCAGCTGCACTACTTCCATGAGTACCAAGGAAAGCTGCGTGCGGTGGTGGGCGCGTCCGAGGCGAAGCAGA
TCGTCAACAGGGCGCTGGTGCTCATCACCCTCGGCGGCAACGACTTTGTCAACAACTACTACCTCATCCCCTTCTCCCTC
CGCTCCCTTCAGTTCTCCCTCCCGGACTACGTCCGCTATCTGATCTCCGAGTACAAGAAAATCCTCATGGTAACAACACT
TGTCTACTTTCCGATAGTACTCCCTTCGTTTCTGTCCAC-----------------------------------------
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--CCTCTAGCTCCGCCA-----CTGCATATATTATGAAATGGAGGGAGTAGTTACTAAAGCTTTTATGCAGAGTAAAAAG
AAACGGGAAGAATAGTAAATTATCAGTTTATGTGGAGTAAAATGAAACGAAGGGA-----------------------GT
ACTAACATGGTCGAGACCAGCACCAGCTAACACGTACGCGCTGGAATGTATAT-ATGCAGAGGCTGTACGATATGGGGGC
GCGGCGTGTGCTGGTGACGGGAACTGGCCCGCTGGGTTGCGCCCCGGCACAGCTCGC---CAGGAGCCGCGGAGGAGGGT
GCAATGCCGACCTGATGCGCGCCGCGGAGCTGTTCAACCCGCAGCTGTCCTGGGTCCTGGAGGAGCTCAACGCGCGCTAC
GGCGACGGAACGTTCATCGCCGCCAACACCTACCGCATCCACTTCGACTTCATCACCGACCCGGCTGCGTACGGGTTCCA
GACGGCCACGGAGGCGTGCTGCGGGCAGGGTCCGCACAACGGGATCGGATTGTGCACCGCGCTATCAAACATCTGCACCG
ACAGGGACCAATACGTGTTCTGGGACGCCTACCACCCCACGGAGCGCGCCAACCGGATCATCGTCAGCCAGTTCATGACT
GGCTCGCTCGACTACGTCAACCCGCTCAACCTCAGCACTGCCCTCCACATAGACATCGCCCTAATGGATTGATATACTCC
ACATAATACTAGTGAAAATTTTGACTGGGCTAAT----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------AAACTTGGACATGAGAGAGATTATTAGCCT
AGTTAAAATGTCGACATTTAAACTAGGCTAGTAATCTCGAGGTTCCCACTTATGAAAATTTTGTCCGTATATAGATGAGC
GTTGAGTGGGAGCAGAAGTCCCCTCTGGTGACTGTTAGAGCCCTCCACATAAGTACTTTCGACGATACTTCTCTTGTTTT
GGACTCCAGTGAGGCTCCTCATTTGTGTAACAGAGCTGCTTTATCTTTCGAAACATC-TTGCTTTAAAAGGGAAGGTTTG
CAACATTTGGTAGCTCAAATGGTCTAAGGAAACGAGAGGTTCACCTAATACTGGGAATTGGTAGTTCATTATTCGTCATC
TCAGGCAGTTTCTTCAGGGTTGGGCGAAGAATCTGAGTGATGTATAAAAGAAAGAAAAAGAGCATTTGTTGGATATTGTT
TACGCTTTACATATCAAGGACGAATCATCACCCCTCTGCATAGTGAACTT------------------------------
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--
>chr2D_878
GTACAA--------------------------------------------------------------------------
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-----GCCTCTTCAGCCCGAGGTCACCCAAACCGGTCTCGTGCATTGCTCACTATATATCGT----GAGGATCGCTCAAG
GGACCGATGTAAGGTTTGCCTCTACCAATCAGTTCACGGCGACGATGGCCAAGAGTTGTTCATCGAGCTGCCTTATGCTC
GCAACGACAATGGCGCTGGGCGTAGTCGTCCTGCTGTCGACGCCG---TCTGAGTGCGCGCGCGCCTTCTTCGTGTTCGG
CGACTCCCTGGTGGACAACGGCAACAACAACTACCTGATGAGCACGGCGCGCGCCGACTCGCCGCCGTACGGGATTGACT
ACCCCACGCACCAGGCCACCGGCCGCTTCTCCAACGGCCTCAACATCCCGGACATCATCAGTACGTACGCGACAACCACC
GCTAGCAAGCTGCCATTAATTA--GCTAGCGCATGCATGCGCTCGCAATTAATGTAGATGTCCATCGGGT----C----G
CGTCTCAGGTGAGCATCTCGGAGCTGAGCCCACGCTGCCGTACTTATCTCCGGAGCTCCATGGCGAGAAGCTGCTCGTGG
GCGCCAACTTCGCGTCGGCGGGCGTCGGCATCCTCAACGACACGGGCATCCAGTTTGTACGCA-------------TCTC
CAACTTGATCA------------ATCCCACGAGCAGCTT-----CTCTCGTCGGAGAGTA--------------------
-----------------CTCAATTAACTCATGAACAATCGGATC-----------TAC----ACAGATGGAGATGGTGAG
GATGAGCAGGCAGCTGCAGTGCTTCCATGAGTACCAGGGGAAGCTGCGCGCTCAAGTGGGAGCGTCCCAGGCGACGCAGA
TCGTGAACCAGGCGCTGGTGCTCATCACCCTCGGCGGCAACGACTTCGTCAACAACTACTACCTCATCCCCTTCTCCCTC
CGCTCCCTCCAGTTCTCCCTCCCCGACTACGTCCACTACCTCATCTCCGAGTACAAGAAAATCCTCATGGTAACAGTCCT
TGTATACACAATAATCGAATAGTCGCAGTCTACTAAGACTT---------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------CATTATGTATCAGAAAATGCTAT
ATTCGTGTGATCTTATATTAAAATCCATGCTT------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------TTTTTTAGTTTTGTTCTTTTATGATTCTTACATGTATAA
TTAAATCTCATTCGACTAAGACCTAGCCACACCC--------------------CTAAAGCTTATATGCGGTGTAAAAAG
C--------------------------------------------AACGAAGGAA-----------------------GT
ACTAACAAGGT--AGACAAGCACCACCTAATACGTACATATGCTGGA--ATGT-ATGCAGAGGCTACACGATATGGGCGC
GCGGCGTGTGCTGGTGACAGGGACGGGTCCACTGGGTTGCGCGCCAGCGCAGCTCGC---CCGGAGCCGTGGTGGGAAGT
GCGACGCCGACCTGATGCGCGCCGCGGAGCTGTTCAACCCGCAGCTGACCCGGATCCTGGAGGAGCTCAACGCACGCTAC
GGCGATGGAACGTTCATCGCCGCCAACACCTTCCGCATCCACTTCGACTTCATCAGCGACCCGGCGGCGTACGGGTTCCG
GATGGCCACCGAGGCGTGCTGTGGGCAGGGGCCGCACAACGGGATCGGCTTGTGCACCGCGCTGTCCAACGTCTGCACCG
ACCGGGACCAGTACGTGTTCTGGGACGCCTACCACCCCACGGAGCGCGCCAACCGGATCATCGTCAGCCAGTTCATGACC
GGCTCGCTCGACTACATCAGCCCGCTCAACCTCGGCACTGCCCTTCACATAGACGCCAGCCTCAAGGACTGATATA----
--------------------------------------------------------------------------------
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--
>chr1B_1039
--------------------------------------------------------------------------------
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--GGCGATCATGGCGCTGGGCGTCGTCCTCCTGG---CGTCGCCG---TCGGAGTGCGCGCGCGCCTTCTTCGTGTTCGG
CGACTCCCTGGTGGACAACGGCAACAACAACTACCTGATGACCACCGCGCGCGCCGACTCGCCGCCGTACGGGATCGACT
ACCCCACGCACCAGGCCACCGGGCGCTTCTCCAACGGCCTCAACATCCCGGACATCATCAGTACGTGGCG----ACCCCT
CCTAGGAATCTGCCATTGATTTTGATTAGCCAGTGCATGCTCGCGTAATGTGTGTACATGTTGGATCACGTGCGC----G
CGTCTCAGGTGAGCAGATCGGCGCGGAGCCCACGCTGCCGTACCTGTCCCCGGAGCTCCACGGCGCGAAGCTGCTCGTCG
GCGCCAACTTCGCGTCGGCGGGCGTCGGCATCCTCAACGACACCGGCATCCAATTTGTACGCGCGACACGAATTGACATC
TTCAGTTTCGCTAATAACTATAGATTAGACAAGCTTCCCCGTACCAAAAATGAGC-------------------------
---------ACTTG--CTAGTTATA---ATATGCATGCGTTTGGACGGTGGTG----------CAGGTGAACATCGTGAG
GGTGAGCCGGCAGCTGCACTACTTCGGCGAGTACCAGGGGAAGCTGCGCGCGCTGGTGGGCGCGTCCCAGGCGACGCAGA
TCGTGAACCGGGCGCTGGTGCTCATCACCCTCGGCGGCAACGACTTCGTCAACAACTACTACCTCATCCCCTTCTCCCTC
CGCTCCCGCCAGTTCTCCCTCCCCGACTACGTCCGCTACCTCATCGCCGAGTACAAGAAGATCCTCATGGTATGGTAA--
--CAC--------------------------CTCTGCACC----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
TTCTTCCGGCAACACCA-----CTAACCAGGTAGACCGACGAC-------------------------------------
--------------------------------------------------------------------------------
--------------GACGAGCACCGGCTGACACGTACTCCCGTTGGATGCATGCATGCAGAGGCTGTACGAGATGGGCGC
GCGGCGCGTGCTGGTGACAGGGACGGGCCCGCTGGGCTGCGCGCCGGCGGAGCTCGCGCTCCGGAGCCGCGACGGGGAGT
GCGACAGGGACCTGATGCGCGCGGCGGAGCTGTTCAACCCGCAGCTGTCCCAGGCCCTGGAGGAGCTCAACGCGCGCTAC
GGCGACGGGACCTTCATCGCCGCCAACTCCTTCCGCGTCCACTTCGACTTCATCAGCGACCCGGCGGCGTACGGGTTCCG
GACGGCCAAGGAGGCGTGCTGCGGGCAGGGGCCGCACAACGGCGTTGGCCTCTGCACGGCGGTGTCCCACCTCTGCGCCG
ACAGGGACCAGTACGTGTTCTGGGACTCGTACCACCCCACGGAGCGCGCCAACCGGATCATCGTCAGCCAGTTCATGACC
GGCTCGCTCGACTACGTCAGCCCGCTCAACCTCAGCACCGCCCTCCACATCGACGCCAGCCTCATGGACTGATGATA---
--------------------------------------------------------------------------------
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--
>chr1A_1039
--------------------------------------------------------------------------------
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--GGCGATCATGGCGCTGGGCGTGGTCCTCCTGG---CGGCGCCG---TCGGAGTGCGCGCGCGCCTTCTTCGTGTTCGG
CGACTCCCTGGTGGACAACGGCAACAACAACTACCTGATGACGACGGCGCGCGCCGACTCGCCGCCGTACGGGATCGACT
ACCCCACGCACCAGGCCACCGGGCGCTTCTCCAACGGCCTCAACATCCCGGACATCATCAGTACGTGGCG----ACCACC
CCTAGCAATCTGCCATTGATTTTGGTTAGCCAGTGCATGCTCGCGCAATGTGTGTACATGTTGGATCACGTGCGTGCGTG
CGTCTCAGGTGAGCAGCTCGGCGCGGAGCCGACGCTGCCGTACCTGTCCCCGGAGCTCCACGGCGCGAAGCTGCTCGTGG
GCGCCAACTTCGCGTCGGCGGGCGTCGGCATCCTCAACGACACCGGCATCCAATTCGTACGCGCGGCACGAACTCATCCC
CAGCTCGGTTGATA------------------------------------------------------------------
-------------ATACTAGTTGGTACTATATGCATGCATTTGGACGGTGGTG----------CAGGTGAACATCGTGAG
GGTGAGCAGGCAGCTGCAGTACTTCGGCGAGTACCAGGGGAAGCTGCGCGCGCTGGTGGGCGCGTCCCAGGCGACGCAGA
TCGTGAACCGGGCGCTGGTGCTCATCACCCTCGGCGGCAACGACTTCGTCAACAACTACTACCTCATCCCCTTCTCCCTC
CGCTCCCGCCAGTTCTCCCTCCCCGACTACGTCCGCTACCTCATCTCCGAGTACAAGAAGATCCTCACGGTATGGTAACA
CACAC--------------------------CTCTGCAC-----------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--CTTCCGGCAACACCA-----CTAGCCACAGGTAAGCA-----------------------------------------
--------------------------------------------------------------------------------
------------GAGACGAGCACCGGCTGACGCGTAC----GTTGGATGCATGCATGCAGAGGCTGTACGACATGGGCGC
GCGGCGCGTGCTGGTGACGGGGACGGGCCCGCTGGGCTGCGCGCCGGCGGAGCTCGCGCTCCGGAGCCGCGACGGGGAGT
GCGACAGGGACCTGATGCGCGCGGCGGAGCTGTTCAACCCGCAGCTGTCCCAGGCCCTGGAGGAGCTCAACGCGCGCTAC
GGCGACGGGACCTTCATCGCCGCCAACTCCTTCCGCGTCCACTTCGACTTCATCAGCGACCCGGCGGCGTACGGCTTCCG
GACGGCCAAGGAGGCGTGCTGCGGGCAGGGGCCGCACAACGGCATCGGCCTCTGCACGGCGGTGTCCCACCTGTGCGCGA
ACAGGGACCAGTACGTGTTCTGGGACTCGTACCACCCCACGGAGCGCGCCAACCGGATCATCGTCAGCCAGTTCATGACC
GGCTCGCTCGACTACGTCAGCCCGCTCAACCTCAGCACCGCCCTCCACATCGACGCCAGCCTCATGGACTGATGATA---
--------------------------------------------------------------------------------
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--
>SNPs
SS--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
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SS
>forward_938
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------CGTGCATTGCCCACTACATG----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--
>reverse_2091
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------GACGGATTTGTCATGCTCGC--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--
>forward_2009
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---------------------------------------------------------------------AGCCATGGCAA
ATCTGACGT-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--
>reverse_3769
--------------------------------------------------------------------------------
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--------TGCGGCAGCTCATTTCTGTA----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--
