>input_sequence_37777
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---------------------------------------------------ATGTTCATACTGCTGGTTCTGATAAAAAG
ATGCTTGGTTCCAGCCAGGACTTGTTCTCGGAAGAATATGTCTTGCTTTGGATGCTGTGGTGATGAAGATACTCAAAGAG
CACCAGACAACAGGAATCAATACCCAGGAAACCATCCAGCAAGTAATAACTTCGAATTCTTTTTTATTACAATTCTATCA
TCTGCAACCCTATTTCTCGTACAACATTCTACTTCTGTTGCCTGATAATATTCATCTAATGAACTGCAACTGATCTGCAG
GGAATGATGCATATCGCACTGCCGATCCAACTCCCAAAGGTCCTCAACCTGTGAAAGTGCAACCCATTGCAGTTCCCACC
ATTCCTATGGATGAAATTAGGGAGGTTACTAAGGGTTTTGGTGATGAAGCTTTGATTGGTGAGGGTTCCTTTGGCAGAGT
ATATTTTGGTACTCTAAGAAATGGTAGAGGTGCAGCAATCAAAAAGCTGGATTCCAGTAAGCAGCCAGACCAAGAATTGC
TGGCACAGGTTCGTATTTCTCCCTGTTTAGGAATTCTGCATTTACTATGGTCTTCTATCTCACAACTTACATTCACAGGT
ATCTATGGTATCAAGGCTTAAGCATGAAAATGTTGTGGAGTTGCTTGGTTACTGTCTTGACGGGAACACCCGTGTCCTTG
CTTATGAGTTTGCCACTATGGGCTCTCTTCATGATATGCTTCATGGTATGGTTTTGTACAATTTGAAGTCTTGAACATT-
CGTGTAATGTTTTTTTATTCATCTATTGGTGCAGTTAAGTTCTTATGTTTGATATAAACCTTTACTTTAAATGTTTACAG
GAAGGAAAGGTGTTAAAGGGGCTCAGCCAGGTCCGGTCTTATCATGGATACAACGGGTGAAGATAGCTGTTGGTGCAGCG
AAAGGCCTAGAGTATCTTCATGAGAAAGCACAGCCTCACGTCATACACAGGGACATCAAGTCCAGCAACGTTCTTCTCTT
TGATGATGATGTAGCTAAAATAGCCGACTTCGATTTGTCAAACCAAGCTCCTGACATGGCAGCCCGGCTTCACTCAACTA
GGGTTCTGGGAACATTTGGATACCATGCACCTGAGTATGTTCTTGTTTTCTTTCAGTTGCTCATTTGCTCCATGAAGCTT
TGG-ATCATTCAACTTAAGCTTGTTTAAACTTTTTGATCAGGTATGCAATGACTGGTCAACTTAGCTCTAAGAGCGATGT
GTACAGTTTTGGAGTTGTTCTTCTGGAGCTATTGACTGGGAGGAAACCTGTCGACCATACATTACCGAGGGGGCAGCAGA
GCCTTGTCACATGGGTAATTTTTGTAC--------CCAATACTGCACAAGTGATCTCCTTTGG---------------TG
GATGGAATTCTAACAGTTGTTTGTTATACACTGGCAGGCCACCCCAAGACTGAGTGAAGATAAGGTTAGGCAATGTGTTG
ACTCTAGACTTGGAGGGGACTATCCTCCTAAGGCTGTTGCAAAGGTATCATAAATAGCCTCTCTTGGTTTCGAAACACTG
CATGGGTTAAGCAGTCTG--TCAGTTATCAGTATTTTATAAAGTATAAAGACGAGGAAAACAAAATACTGATTTTGCTGG
AACTTACTAAGCTTGCCATTTTTGTTTTGAATGGATGAGTAATACTCCCTCCGTCCGGAATTACTTGACGCTCAATCGGA
TGTATCTAGCACTAACGCCAGGAATTACTTGACGCTCAAACGGATGTATCTAGCACTAACGCCTGTTCGAGCATGTCA--
---------------------AAGTAATTCCGCACGGAGGGAGTACTAGCTAAGAATTTAATTTCCAGAAACTGTGTTTG
TTGTGGCATAG---GTAAAAGTATTTCT------------------ATAAAATATGTCCTACTACTGTGATTAACATCAT
TCTCGGAGCATGCT-------ATATGTCATAACCAAGTCGAGGTATTCTTAGGTGAAGCCACTTGTAACACCATTTCCTC
TTCTGCGTGTTGTTTGAAACAGTTTGCAGCCGTCGCGGCATTGTGCGTCCAATATGAAGCCGACTTCCGGCCAAACATGA
GCATCGTCGTCAAGGCGCTCCAGCCCCTGCTGAATGCGCGAGCAGCCCACCCCGGGGCTGAGCATGCCGGACGCTAA---
--------------------------------------------------------------------------------
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---------------------------------
>chr1A_1_TraesCS1A01G079700
GGCAAGAGTGAGTGAAGAACTGAGTTGGCGCGCCTGCCAGACCGCCAAGGTTGTTTGCGCGCT----ATTTCCCTCGCGC
AATTTCAGTTTAATTGCATGCAAATTTAGAAGTAGTTATCGTTGAGCTCAAAGCTGTGGACCAGGCAGTAATGTACTCCC
ACCCTCTCATTTATCATAGCTACCTTGTGGCGGTTGCACTTGTTTAC---TAGCAAAAGGAAGCACATAATTTGCAAGTG
TTCATCTGGTGCGGTGGGCCAGCCACTGATAGCTGGATGAATAATCTAAGACGTTTCCAGCCGCTATGCGTCATTGGGTC
TGGATCAATGTGGTATGAAACCTGTAGGATATTGACAAGTATCAAGCATGTTGATGCAGAATGAGCTGTCTTTTGGTCAG
CTATAATAGCTAGTAGTGGTTGTTAGTTTCTGCCTTCCATGTGGATTCCAATCCTACCTGGGAAGATAATAATAAGAAAT
AATAAAGCACAGAGGAATGGCTCCATATTTTAGGTTTTCCTTGGCAGAGAATGTTTGCACATGAACTTGGTGTGCACATG
AGATTGTTTTGCTTGATAGAAAATATATGTGTGATTTCTGTAGCTCCCTTGCTGCATGTACCATAGAAGAATATGCTGCA
CCTGCAAGCAGGTCATGGTTCACTTATGGGC-TTGGTTTTTCCATTTGAGATAGATACAGAGGAGAGA--GTGAGACAAA
GGGAAGCAAAGTAGTGGGATAAAATGAATGGAGAGGGGAAATTTAGCTGTACATCTTAAGCATTCCT-TCACTTGTTTCC
TAAAAATTCAACTTCTATTTCCCCATTGGGGCCATTACGCTATATACAGAATGAAGTATGAATCGAAACTAAGTCACCTT
CCATTTCTCTCCACTAGTCCTGTGGCACGTGCTATTAGTATTTGTCAGATATATGGCCACAAAACTACAGTTACAGTTCC
GTTTATGTTCCCAACCGAGTGCTCGCTTGTTTGTTTTTGTATGAGCTATCTATGTTCATACTGCTGGTTCTGATAAAAAG
ATGCTTGGTTCCAGCCAGGACTTGTTCTCGGAAGAATATGTCTTGCTTTGGATGCTGTGGTGATGAAGATACTCAAAGAG
CACCAGACAACAGGAATCAATACCCAGGAAACCATCCAGCAAGTAATAACTTCGAATTCTTTTTTATTACAATTCTATCA
TCTGCAACCCTATTTCTCGTACAACATTCTACTTCTGTTGCCTGATAATATTCATCTAATGAACTGCAACTGATCTGCAG
GGAATGATGCATATCGCACTGCCGATCCAACTCCCAAAGGTCCTCAACCTGTGAAAGTGCAACCCATTGCAGTTCCCACC
ATTCCTATGGATGAAATTAGGGAGGTTACTAAGGGTTTTGGTGATGAAGCTTTGATTGGTGAGGGTTCCTTTGGCAGAGT
ATATTTTGGTACTCTAAGAAATGGTAGAGGTGCAGCAATCAAAAAGCTGGATTCCAGTAAGCAGCCAGACCAAGAATTGC
TGGCACAGGTTCGTATTTCTCCCTGTTTAGGAATTCTGCATTTACTATGGTCTTCTATCTCACAACTTACATTCACAGGT
ATCTATGGTATCAAGGCTTAAGCATGAAAATGTTGTGGAGTTGCTTGGTTACTGTCTTGACGGGAACACCCGTGTCCTTG
CTTATGAGTTTGCCACTATGGGCTCTCTTCATGATATGCTTCATGGTATGGTTTTGTACAATTTGAAGTCTTGAACATT-
CGTGTAATGTTTTTTTATTCATCTATTGGTGCAGTTAAGTTCTTATGTTTGATATAAACCTTTACTTTAAATGTTTACAG
GAAGGAAAGGTGTTAAAGGGGCTCAGCCAGGTCCGGTCTTATCATGGATACAACGGGTGAAGATAGCTGTTGGTGCAGCG
AAAGGCCTAGAGTATCTTCATGAGAAAGCACAGCCTCACGTCATACACAGGGACATCAAGTCCAGCAACGTTCTTCTCTT
TGATGATGATGTAGCTAAAATAGCCGACTTCGATTTGTCAAACCAAGCTCCTGACATGGCAGCCCGGCTTCACTCAACTA
GGGTTCTGGGAACATTTGGATACCATGCACCTGAGTATGTTCTTGTTTTCTTTCAGTTGCTCATTTGCTCCATGAAGCTT
TGG-ATCATTCAACTTAAGCTTGTTTAAACTTTTTGATCAGGTATGCAATGACTGGTCAACTTAGCTCTAAGAGCGATGT
GTACAGTTTTGGAGTTGTTCTTCTGGAGCTATTGACTGGGAGGAAACCTGTCGACCATACATTACCGAGGGGGCAGCAGA
GCCTTGTCACATGGGTAATTTTTGTAC--------CCAATACTGCACAAGTGATCTCCTTTGG---------------TG
GATGGAATTCTAACAGTTGTTTGTTATACACTGGCAGGCCACCCCAAGACTGAGTGAAGATAAGGTTAGGCAATGTGTTG
ACTCTAGACTTGGAGGGGACTATCCTCCTAAGGCTGTTGCAAAGGTATCATAAATAGCCTCTCTTGGTTTCGAAACACTG
CATGGGTTAAGCAGTCTG--TCAGTTATCAGTATTTTATAAAGTATAAAGACGAGGAAAACAAAATACTGATTTTGCTGG
AACTTACTAAGCTTGCCATTTTTGTTTTGAATGGATGAGTAATACTCCCTCCGTCCGGAATTACTTGACGCTCAATCGGA
TGTATCTAGCACTAACGCCAGGAATTACTTGACGCTCAAACGGATGTATCTAGCACTAACGCCTGTTCGAGCATGTCA--
---------------------AAGTAATTCCGCACGGAGGGAGTACTAGCTAAGAATTTAATTTCCAGAAACTGTGTTTG
TTGTGGCATAG---GTAAAAGTATTTCT------------------ATAAAATATGTCCTACTACTGTGATTAACATCAT
TCTCGGAGCATGCT-------ATATGTCATAACCAAGTCGAGGTATTCTTAGGTGAAGCCACTTGTAACACCATTTCCTC
TTCTGCGTGTTGTTTGAAACAGTTTGCAGCCGTCGCGGCATTGTGCGTCCAATATGAAGCCGACTTCCGGCCAAACATGA
GCATCGTCGTCAAGGCGCTCCAGCCCCTGCTGAATGCGCGAGCAGCCCACCCCGGGGCTGAGCATGCCGGACGCTAAGCA
CCACTCCGGCCTTTTGTATGAT---ATAGATAAGGAAAAATGAGCCATCAATTGTTGTTCTTGCGGGGCGCGTGGCAGGC
GGTTTTTGTACATTTGTGATTATTCTTCCCAAGTTGTAACCCTCGAGATTCTAGTACCAGAAATATTTGATTCTTTGTAT
CGGTTGCAAGGTCAGCAAGTATCTAGTACCTAGAACACTTGTCATCGGACAGAGAGAAAAAGGAAGATAATAAACACTGC
TGCGTGAGCTTATGCCATCTGCTTCCAAGTCCAGATTCCAGA----------------------ACAAATTTCTCATTTT
GTGTTGGATTTTTCTTTGTATAGCCTTGTTTGGAACAGGAATCTTGCTAAGATTTTACTGGAATCTCAAACAGAAACAGA
AGGGAAAAGGAGTCGCATAATGGACTGAAGAAGCAGGAATTAGCCATGTACTTTAATGATCTAAAACATATTACATGTAC
TTTAGTGATCTAA---------------------------------AATGTCTTATATTAGTTTACAGAGGAAGTGGTAG
ATGCTGAAGAGTACTAAACCTCTTAAATTAGAGGAAT-------------------------------------AGTAGA
TGCTAAAGAGT--------------------------------------------------AGTACTAAACATCATAGGA
TAAGTACAGGATTACAGTTAACTACCACACATGAACTAGCAGCTGAGCTACACTGCTACGGTCTAGAGGACTAAACCTGG
ACGTCGACGAATTCTGGTCTCTGAACATCTGACCATGCAGCATGTCCAGGCCTAAACCTAATTTTACAACGCTACTCCAG
TACATGACTGGCTTCTTAAAACTACAGAGCGAGCTAGTTGCTCACCTAACAT-----------AACTTCTCTACACAAGA
TGACGCTGTTCTCAGCGCTTTGCGAGGACCATCACGACCAGCATCGACATGCCGGCGACAAACTTGAACGTATCATTCTC
CCAGAAGGGCTTCTTGCCTTCGTCGCGGCGAGGGCCGTCGGGCTGCTTCATGGCCATCTGATCCTTGAGCTCCTTGAGTT
GCTTGTCCCTCTTCTCCCCCAACTGCAGAGGCA
>chr1B_1
GGCAAGAGTGAGTGAAGAACTGGT-------GCCCGCCAGCCCGCCAAGATTGTTTGCGCGCCAGCCATTTCCCTCGCGC
AATTTCAGTTTAATTGCATGCAAATTTAGAGGTAGTTATCTTTAAGCTCAAAGTTGTGGACCAGGCAGTAATGTACTCCC
ACCCTCTCATTTATCGTAGCTACCTTGTGGCGGTTGCACTTGTTTAC---TAAAAGGAAGCG---CATGATTTGCAAGTG
TTCATCTGGTGCGGTGGGCCAGCAGCTGATAGCTGGATGAATAATCTAACATGTTTCCAACCGCTATGCGTCATTGGGTC
TGGATCAATGTGGTATGAAACCTGTAGGATATTGACAAGTATCAAGGATGTTGATGCAGAATGAGCTGTCTTCTGGTCAG
CTATAATAGCTAGTAGTGGTTGTTAGTTTCTGCCTTCCATGTGGATTCCAATCCTACCTGGGAAG---ATAATAAGAAAT
AATAAAGCACAGAGGAATGGCTCCATATTTTAGGTTTTCCTTGACAGAGAATGTTTGCACATGAACTTGGTGTGCACATG
AGATTGTTTTCCTTGATAGAATATATATGCGTGATTTCTGTAGTTCCCTTACTGCATGTACCGTAGAA---CATGCTGCA
CCTGCAAGCAAGTCATGGTTTACTTATGCGCTTTGGTTTTTCCATTTGAGATAGATACAGAGGAGAGAAAGCAAGACAAA
GGGAAGCAAAGTAGTGTGATAAAATGAATGAAGAGGAGAAATTTAGCTGTACATCTTAAGCATTCCTCTCACTTGTTTCC
T-AAAATTCAACTTCTATTTCCC-ATTGGGGCCATTACGCTCTCTATAGAATGAAGTA------GAACCTAAGTCACCTT
CCATTTCTCTCCACTAGTCCTGCGCCACATGCTATTAGTATTTGTCTGATATATGACCACAAAATTACAGTTACAGTTCC
GTTTATGTTCCCAACCGAGTGCTTGCTTGTTTGTTTTTGTATGAGCTATCTATGTTCATACTGCTGGTTCTGATAAAAAG
ATGCTTGGTTCTAGCCAGGACTTGTTCTCGGAAGAATATGTCTTGCTTTGGATGCTGTGGTGATGAAGATACTCAAAGAG
CACCAGACAACAGGAATCAATACCCAGGAAGCCATCCAGCAAGTAATAACTTTGAATTTTTTTT-GTTACAATTCTATCA
TATGCAACCCCATTTCTCGTACTGCATTTTGCTTCTGTTGCCTAATAATATTTATCTAATGAACTGCAACTGATCTGCAG
GGAATGATGCATATCGCACTGCCGATCCAACTCCCAAAGGTCCTCAACCTGTGAAAGTGCAACCCATTGCAGTTCCCACC
ATTCCTATGGATGAAATTAGGGAGGTTACTAAGGGTTTTGGTGATGAAGCTTTGATTGGTGAGGGTTCCTTTGGCAGAGT
ATATTTTGGTACTCTAAGAAATGGTAGAGGTGCAGCAATCAAAAAGCTGGATTCCAGTAAGCAGCCAGACCAAGAATTGC
TGGCACAGGTTCGTGTTTGTGCCTGTTTAGGAATTCTGCATTTACTATGGTATTCTATCTCACAAATTACATTCACAGGT
ATCTATGGTGTCAAGGCTTAAGCATGAAAATGTTGTTGAGTTGCTTGGTTACTGTCTTGATGGGAACACCCGTGTCCTTG
CTTATGAGTTTGCCACTATGGGCTCTCTTCATGATATGCTTCATGGTATGGTTTTGTACAATTTGAAGTCTTGAACATT-
CTTGTAATGTTTTTTTATTCATCTATTGGTGCAGTTAAATTCTTATGTTAA--ATAAACCTTTACTTTAAATGTTTACAG
GAAGGAAAGGTGTTAAAGGGGCTCAGCCAGGACCAGTCTTATCATGGATACAACGGGTGAAGATAGCTGTTGGTGCAGCG
AAAGGCCTAGAGTATCTTCATGAGAAAGCACAGCCTCACGTCATACACAGGGACATCAAGTCCAGCAACGTTCTTCTCTT
TGATGATGACGTGGCTAAAATAGCCGACTTTGATTTGTCAAACCAAGCTCCTGACATGGCAGCCCGGCTTCACTCAACTA
GGGTTCTGGGAACATTTGGATACCATGCACCTGAGTATGTTCTTGTTTTCTTTCAGTTGCTCATTTGCTCCATGAAGCTT
TGGAATCATTCAACTTAAGCTTGTTTAAACTTTTTGATCAGGTATGCAATGACTGGTCAACTTAGCTCTAAGAGCGATGT
GTACAGTTTCGGAGTTGTTCTTCTGGAGCTATTGACTGGGAGGAAACCTGTCGACCATACATTACCGAGGGGGCAGCAGA
GCCTTGTCACATGGGTAATTTTTGTACCCAATAGGCCAATACTGCACAAGTGATCTCCTTTGGAGCTGTTCTGTTTGGTG
GATGGAATTCTAACAATTGTTTGGTAAACACTGGCAGGCCACCCCAAGACTGAGTGAAGATAAGGTTAGGCAATGTGTTG
ACTCAAGACTTGGAGGGGACTATCCTCCTAAGGCTGTTGCAAAGGTATCATAAATAGCCTCTCTTGGTTTCGAAACAATG
CATGAGTTAAGCAGTCTGTGTTAGTTATCAGTATTTTATAAAGTATAAAGATGTGGAAAGCAAAATACTGATTTTACTGG
AACTTACAAAGCTTGCCTTTTTTGTTTTGAATGGATGAGTAATACTCCGTCTGTCCAGAAT-------------------
-------------------------TACTTGACGCTCAAACGGATGTATCTAACACTATTTTAGTGCTTGATACATCCGT
TTGAGCATCAAGTAATTCATCAAGTAATTCGGGACAGAGGGAGTACTAGCTAAGAATATCATTTCCAGAAATTGTGTTTG
TTGTCACATATATAGTAAAAATATTTCTACAGCCAGTTTTATGCTCATAAAATATGTCCCACTACTGTGATTAACATCAT
TCTTGGGGCATGCTTGGTTCCATCTGTCATAACTAAGTCGAGGTACTCTTCGGCAAAGCCACTTGTAACACCATTTCTTC
TTCTGTGTGTTGTTTGAAACAGTTTGCAGCCGTCGCTGCATTGTGCGTCCAATACGAAGCCGACTTCCGGCCAAACATGA
GCATCGTCGTCAAGGCGCTCCAGCCCCTGCTGAACGCGCGAGCAGCCCACCCCGGGGCTGAACACGCTGGACGCTAAGCT
GCACTCCGGCCTTTTGTATGATATAATAGATAAGGAAAAATGAGCCATCAATTGTTGTTCTTGCGGGGCATGTGGCAGGC
GGTTTTTGTACATTTGTGATTATTCTTCCCAAGTTGTAACCCTCGAGATTCTAGTACCAGAAATATTTGATTCTTTGTAT
CGGTTGCAAGGTCAGCAAGTATCTAGTACCTAGAACACTTGTCATCAGACAG--AGAAAAAGGAAGAAAATAAACACTGC
TGCGTGAGCTTATGCCATTTGCTTCCAAGTTCAGATTCCAGATTGGTTACATATCATTCAATCAACAAATTTCTCTTTCT
GTTTTTTGTTTCTTTGTAAGAATCTTGGA-------------------AAGGTTTTACTGGACTCTTAAACAGAAACAGA
AGGGGACAA-AGTCGCATAATGCTTGTACTAAATCAGTGACACTTATTTTAG----------------------------
---------------------------------------------------------------TACTGAGGAAGT---AG
ATGCTAAGGAGTACTCCTTCGTAAAGAAATATAAGAGCTTAGATCACTAAATGCACTTATTTTAGTATGGAGGAAGTAGA
TGCTAAGGAGTACTCCTTCTGTAAAGAAATATAAGAGCTTAGATCACTACGTTTAGTAGGGAGTACTAAACATGATAAGA
TAAGTACAGGATTACAGTTA-CTACCATACATGAACTAGCAGATGAACTACATTGCTACGGTCTAGAGGACTAAACTTGG
ATGTCGGCGAATTCTGGTCTCTGAACAT-TGACCATGCAGCATGTCCAGGCCTAAACCTAATTTTACAACGCTACTCCAG
TACATGGCTGGCTTCTAAAAACTACAGAGCGAGCTAGCTGCTCACCTAACTT-----------AACTTCTCTACACAAGA
TGACGCTGTTCTCAGCGCTTTGCGAGGACCATCACGACCAGCATTGACATGCCGGCGACGAACTTGAACGTGTCATTCTC
CCAGAAGGGCTTCTTGCCTTCGTCGCGGCGAGGGCCCTTGGGCTGCTTCATGGCCATCTGATCCTTGAGCTCCTTGAGCT
GCTTGTCCCTCTTCTCCCCCATCTGCAGAGGCA
>chr1D_1
GGCAAGAGCGAGTGAAGAACTGAGCTGGCGCGCCCGCCAGCCCGCCAAGATTGTTTGCGCGC------------------
AATTTCAGTTTAATTGCATGCAAATTTAGAAGTAGTTATCGTTAAGTTCAAAGCTGTGGACCAGGTAGCAATGTACTCCC
ACCCTCTCATTTATCATAGCTACCTTGTGGCGGTTGCACTTGTTTACTAGTAAAAGGAAGCG---CATAATTTGCGAGTG
TTCATCTGGTGCGGTGGGCCAGCCGCTGCTAGCTGGATGAATAATCTAACACGTTTCCAACCGCTATGCGTCATTGGGTC
TGGATCAATGTGGTATGAAACCTGTAGGATATTGAGAAGTATCAAGGATGTTGATGCAGAATGAGCTGTCTTTTGGTCAG
CTATAATAGCTGGTAGTGGTTGTTAGTTTCCGCCCTCCATTTAGATTCCAATCCTACCTGGGAAG------ATAAGAAAT
AATAAAGCACAGAGGAATGGCTCCATATTTTAGGTTTTCCTTGACAGAGAATGTTTGCACATGAACTTGGTGTGCACATG
AGATTGTTTTCCTTGATAGAAAATATATGCGTGATTTCTGTAGTTCCCTTACTGCATGTACCGTAAAA---TATGCTGCA
CCTGCAAGCAAGTCATGGTTCACTTATGGGC-TTGGTTTTTCCATTTGAGATAGATACAGAGGAGAGAAAGTAAGACGAA
GGGAAGCAAAGTAGTGGGATAAAATGAACGAAGAGGAGAAATTTAGCTGTACATCTCAAGCATTCAT-TCACTTGTTTCC
T-AAAATTCAACTTCTGTTTCCCCATTGGGGCCATTACGCTATCTACAGAATGAAGTATGAATCGAAACTAAGTCACCTT
CC------------------------------------------------------------------------------
GTTTATGTTCCCAACCGAGTACTCCCTTGTTTGTTTCTGTATGAGCTATCTACGTTCATACTGCTGATTCTGATAAAAAG
ATTCTTGGTTCCAGCCAGGACTTGTTTTCAGAAGAATATGTCTTGCTTTGGATGCTGTGGTGATGAAGATACTCAAAGAG
CACCAGACAACAGGAATCAATACCCAGGAAGCCATCCAGCAAGTAATAACTTTGACTTCTTTTTTGTTACCATTCTATCA
TA-------CCATTTCTCATACTGCATTTTACTTCTGTTGCCTGATAATATTTATCTAATGAACTGCAACTGATCTGCAG
GGAATGATGCATACCGCACTGCCGATCCAATTCCCAAAGGTCCTCAACCTGTGAAAGTGCAACCCATTGCAGTTCCCACC
ATTCCTATGGATGAAATTAGGGAGGTTACAAAGGGTTTTGGTGATGAGGCTTTGATTGGTGAGGGTTCCTTTGGCAGAGT
ATATTTTGGTACTCTAAGAAATGGTAGAGGTGCAGCAATCAAAAAGCTGGACTCCAGTAAGCAGCCAGACCAAGAATTGC
TGGCACAGGTTCGTGTTTGTCCCTGTTTAGGAATTCTGCATTTACTATGGTCTTCTATCTCACAAATTACATTCACAGGT
ATCTATGGTGTCAAGGCTTAAGCATGAAAATGTTGTTGAGTTGCTTGGTTACTGTCTTGATGGGAACACCCGTGTCCTTG
CTTATGAGTTTGCCACTATGGGCTCTCTTCATGATATGCTTCATGGTATGGTTTTGTGCAATTTGAAGTCTTGAACATTT
CGTGTAATGTTATTTTATTCATCTATTGGCGCAGTTAAGTTCTTATGTTAA--ATAAACCTTTACTTTAAATGTTTACAG
GAAGGAAAGGTGTTAAAGGGGCTCAGCCAGGTCCGGTCTTATCATGGATACAACGGGTGAAGATAGCTGTTGGTGCCGCG
AAAGGCCTAGAGTATCTTCATGAGAAAGCACAGCCTCACGTCATACACAGGGACATCAAGTCCAGCAACGTTCTTCTCTT
TGATGATGATGTAGCTAAAATAGCTGACTTCGATTTGTCAAACCAAGCTCCTGACATGGCAGCCCGGCTTCACTCAACTA
GGGTTCTGGGAACATTTGGATACCATGCACCTGAGTATGTTCTTGTTTTCTTTCAGTTGTTCATTTGCTCCATGAAGCTT
TGGAGTCATTCAACTTAAGCTTGTTTAAACTTTTTGATCAGGTATGCGATGACTGGTCAACTTAGCTCTAAGAGCGATGT
GTACAGTTTTGGAGTTGTTCTTCTGGAGCTATTGACTGGGAGGAAACCTGTCGACCATACATTACCGAGGGGGCAGCAGA
GCCTTGTCACATGGGTAATTTTTGTGC--------CCAATACTGCACAAGTGATCTCCTTTGGAGCTGTTCTGTTTGGTG
GATGGAATTCTAACAATTGTTTGGTAAACACTGGCAGGCCACCCCAAGACTGAGTGAAGATAAGGTTAGGCAATGTGTTG
ACTCAAGACTTGGAGGGGACTATCCTCCTAAGGCTGTTGCAAAGGTATCATAAATAGCCTCTCTTGGTTTCGAAACAATG
CATGAGTTAAGCAGTCTGTGTCAGTTATCAGTATTTTATAAAGTATAAAGATGTGGAAAATAAAATACTGATCTTACTGG
AACTTACCAAGCTTGCCATTTTTGTTTTGAATGGATGAGTAATACTCCCTCCGTCCGGAATTACGT--------------
-------------------------------ACGCTCAAACGGATGTATGTAACATTATTTTAGTGCTAGATACATCCAT
TTGAGCGTC------------AAGTAATTTTGGACGGAGGGAGTACTAGCTAAGAATTTCATTTCCAGAAACTGTGTTTG
TTGTCACATATAGTA-AAAAGTATTTCTGCAGCTGCTTTTATGCTCATAAAATATGTCCCGCTACTGAAATTAACATCAT
TCTTGGAGCATGCTTGGTTCCATCTGTCATAACTAAGTCGAGGTACTCTTCGGCAAAGCCACTTGTGACACCATTTCTTT
TTCTGCTTGTTGTTTCAAACAGTTTGCAGCCGTCGCGGCATTGTGCGTCCAATACGAAGCCGACTTCCGGCCAAACATGA
GCATCGTCGTCAAGGCGCTCCAGCCCCTGCTGAATGCGCGAGCAGCCCACCCTGGGGCTGAGCATGCCGGACGCTAAGCT
CCACTCC------TTGTATGATATAATAGATAAGGAAAAATGAGCCATCAATTGTTGTTCTTGCGGGGCGCGTGGCAGGC
GGTTTTTGTACATTTGTGATTATTCTTCCCAAGTTGTAACCCTCGAGATTCTAGTACCAGAAATATTTGATTCTTTGTAT
CGGTTGCAAGGTCAGCAAGTATCTAGTACCTAGAACACTTGTCATCAGAC----AGAAAAAGGAAGAAAATAAACACTGC
TGCGTGAGCTTATGTCATTTGCTTCCAAGTCCAGATTCCAGA----------------------ACAAATTTCTCATTTT
GTGTTGGATTTATCTCTGTATAGCCTTGTTTGGAACAGGAATCTTGCTAAGATTTTACTGGAATCTCAAACAGAAACAGA
AGGGGAAAAGAATCGCATAATGGACTCAAGAAGCAAGAATTAACAATGTACTTTGGTGATCTCAAACATCTTATATGTAC
TTTGGTGATCTAAAACGTATTATATTAGTTTACAGAGGAACAGTAGAATGTCTTATATTAGTTTACAGAGGAAGT---AG
ATGCTAAAGAGTACCAAATGTCTTATATTAGAAGAAT-------------------------------------AGATGC
TTAA--------------------------------------------------------GAGTACTAAACATCATA---
-AAGTACAGGATTACAGTTAACTACCATACATGAACTAGCAGCTGAGCTACACTGCTACGGTCTAGAGGACTAAACCTGG
ATGTCGACGAATTCTGGTCTCTGAACATCTGACCATGCAGCATGCCCAGGCCTAAACCTAATTTTACAACGCTACTCCAG
CACATGGCTGGCTTCTTAAAGCTACAGAGCGAGCTAGTTGCTCACCTAAAGTCTAGAGTCTCCAACTTCTCTACACAAGA
TCACGCTGTTCTCAACGCTTTGCGAGGACCATCACGACCAGCATTGACATGCCGGCGACGAACTTGAACGTATCATTCTC
CCAGAAGGGCTTCTTGCCTTCGTCATGGCGAGGGCCGTTGGGCTGCTTCATGGCCATCTGATCCTTGAGCTCTTTGAGCT
GCTTGTCCCTCTTCTCCCCCAACTGCAG-----
>SNPs
------------------------S---------S-----S--------S------------S-----------------
-------------------------------------------S------------------------------------
----------------------------------------------------SS-SS-S-SSSSS---------------
------------------------S------------------------S---------S--------------------
----------------------------------------------S---------------------------------
-----------------------------------------------------------------SSS------------
-------------------------------------------S------------------------------------
----------S------------------S-------------S------S-----------S-----SSS---------
----------S-------------------------------------------------------------S-------
------------------------------S-----S-------------------------------------------
-S-----------------------------------------S------------------------------------
----------------------S-S---S-----------------S--------S--------S---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------S---------------------S------------S--------------
-S--------S-----------SS----S-----------------------S---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------S---S----------------------------------------------S--------------
---------S--------------------------S-----------------------S-------------------
--------------------------------------------------------------------------------
-------------------------------------------------SSSS---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------S-------S--S-----------------------------------------------------
----S------------------------------------------------------------------------S--
----S----------------------------------------------S-S---------------------S----
-------S--------------------------------------------------------S-SSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSS---------------------------S-----SSSSSSSSSSSSSS-SS--S--
------------------------------S-S--------------------------S--------------------
----SS----S------------------------------------------------S--------------------
---S-------------------S---------S-----------S----S--SS----------------------S--
------------------------------------------------------S-------------------------
-------------------------------------------------------------------------------S
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------S-----SS-------------S------------
------------------S-------------------------------------------------------------
-----------S---S----------------------------------------------------------------
----S---S-----------------S--------S------S-S---------SS------S------S---S------
---S-----------------------------------------------------------------------SSS--
-----S------------S------S------S-----------------------------------------------
------S----------------------------------------------------------------------S--
---------------------------S----------------------------------------------------
-S------------------------------------------------------------------------------
------S-------------------------------------------S-----------------------------
--------------------------------------------S--------------S--------------------
--------------------------------------S---------------------------------------S-
---------------------------------
>forward_623
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-------------------------------------------CTCCCTTGCTGCATGTACCA-----------------
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>reverse_2636
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---------------------------------------------------------------------------GCTGG
AACTTACTAAGCTTGCC---------------------------------------------------------------
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>forward_909
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----------CCACTAGTCCTGTGGCACG---------------------------------------------------
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---------------------------------
>reverse_2736
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------CGCCAGGAATTACTTGACGC---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------
>forward_2705
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------TCCCTCCGTCCGGAATTACT---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------
>reverse_4319
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------TT
GCTTGTCCCTCTTCTCCC---------------
