>input_sequence_37730
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---------------------------------------------------------------------ATGAGAAATCC
AACGGCGGCCGATGCCGTCAGCGAGTTGGCGGAGCTGGTCCTCCCGTGGCTGCCGCCGCCCGACCTTGCCGCCGCGGCTT
CCGCCAGCCGCGCCATGCGAGCGGCCGCGTCTGCCGTCACCGCCCGCCGCGCCGCCGACTCGGCTCGCGGCCTGGAGGCC
TTCCCTGCCCCCTTCGTCAACCCCATCGACTCCCAGCCCTACTCCTACTTCATCTACACGCCCTTCTCCCTCATACCTTC
CGCGGCCTCCTTCCACGCGCAGCCGTGGGGCTGCGCATGGTCCCGGACTCCGGGTCCTACCTGGCCCCGCCCCGACCTAG
GCCTCCCCTTGGCCGGCTGCTCGTGCGCCCGGGGGGAGTGC--GGCGGCGCGGCGTGCGCGTGCGCCGACGCGGAGGCCG
AGGCGGCGGATGCGTCGGGGGC-GGGTATGGCGAGCCTCAGCGAGTGCGGCGACGGGTGCGCGTGCGGGCCCTCGTGCGA
GAACCGGCGGACGCAGCGCGGCGTCACGGTGCGGCTGCGCGTCCTG----CGCCAACTGAAGAAAGGGTGGGCGCTGCAC
GCCGCCGAGGTCATTCACCGCGGCCAGTTCGTCTGCGAGTATGCCGGTA------------CGATTCTAGAATACACCCC
TCCCTAGTTCCGATGACGCTGCTGAATCCTTGT-CAAAATTGTCGATCAATGAATGCTAGA---TTGATGATTTATGAAT
TTACACTAGAGTATGCAAAGTCATGA--------TTT-CCCTTACATATTTGTCAAACGATGATGCTTG----GATGCAG
AT-AAGTTCACCTGCAGATGTGCCTCACAACTGATCCCCGTGGTCAGTTTTGGTCTCAGTATGGTGTATTAGTTGTGACT
CTCGTGTTTGTTTCGGTTTACACTGAATTGCGTCAAGGCTTCAAAGAAAATCAACGGACTTGATAATTAGTTGCTTAGAG
GGCAAGAACTTGCTACTGTATCGTGGTTCATGTCAAAAGCATTTTCAG----GTAGGATAGAGGGTCCCTTGAAAATATC
TGAAAGAATCATGCACTTCGAGTGTAAGGTGTGGTTT---------GGGATAGGTATCTGTATGCAGTAATGATGTGCTA
ATCTTGATAAATATTTGAAGGAGGTTTGGAATATGGAAGCCCAATCTCCAGTTTTATCTGAACAGAATCAT-AGAGTTTA
GAGTGCACACCAGCAATGCAAATGCCTACTTTGTGGGTGGCTAGAAAATTATTGTTCTGCATTAGAGCATTGTTGTTTGA
AAAAACTGAACTTCATATACCAATGACTGGGATCACTGAAAATTCATGTGAGCCCTCATCATCTTTACCTGGCATCATCT
ATGAGCTACTCAAGTTTTGGGTACTTCCCAAATACCGTTTGTTGTTGG---CCTACTCCATTGGTTTGTTAGGCTGCATT
TATTGTTAAATCCCTTTTGAATTGTGAAGGGCTGCATATAAAGTTCTTTTTGGCTCGGCGGTCGGGTGTGCTTATGTTTT
GG--------------------------TGACTAGATTACTTCGTATTCTGAATGGCAGACTGAGCTTACCATTTTCCAG
TTTTTAATCTGAAAGACAAATATAAGGGCTGTAGCCTGTGGGAATTAGAGGGCTGATTGGAAAATCCCTTTCGTAATCTT
CACATAACTTTCTTTAGGTCAGCTTTAGCTTACATTGGTTTATTAATTGCGGGTTATGTTCCTGCCAACATTGACTTTAA
CTATGCTATATTTATGTTTGAATTATTATAGGTGAGTTCTTGACAACAGAAGAAGCCCGGAGGAGGCATAGGCTGTATGA
CGAGCTTGCCTCGGTTGGTAAGCTCTCTCCTGCACTCCTGGTCATACGAGAGCATCTTCCTTCTGGGAGAGTATGCATGC
GAGTTAACATTGATGCAACAAAAGTGGGAAACGTGGCTCGTTTCATCAACCATTCATGTGACGGAGGCAACCTGCGCCCT
ATCTTAGTGAGGAGCTCTGGCTCGTTGCTCCCAAGGCTCTGCCTTTTTGCTGCCAGAGATATAGTGGACGGGGAAGAGCT
CGCCTTCAGTTACGGGGATGCTAAACCCAATCCTAAGGGCTTACCGTGCTTCTGTGAAAGCTCGTGTTGCCCTGGTGTAT
TACCTGCAGAAGAAACCTAA------------------------------------------------------------
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>chr3D_1_TraesCS3D01G307900
TCATGGAAGTGGTCATAGTTCTTACGCCTCTTCGGGGCGTTGCGAGCTCCACCATCACCTTGCCCTTCTTGTCAAATAAA
ACATTCTTGCCCTTTGAGGAGTTCCCTGAAGCTGCATTGTTGAGGACGAGCTTGTCATTCTGCATTGAACGTATGAACAA
CAGGTCAATGAATG--------------------TACCTTGATCAGTGAGCATGCATACTATTCCTAGTAGGCACTCTTA
TTCCTACTCTGGTCATAAGCACAAAGCATGGAAGCACGCAATATGGATTAACCCGATTAGAGGGGAATCAAATCGAATCG
GATCGAAGC-AAAAAAAAACTGATCAGATGCGCTTCGTTCGGTCTCAAATCGAAGCATGCAACAACTGATGCCTAAATCG
A--------------------------------AGCCTACAGCTACAATTGATGCCTAGATCGACGAATACAACTACAAT
CGATGCCTAAATCGAAGCTTACAACTACAATCGATGCAAATCAAAGGGTACAACTACAATCATGTAAAATGGGGAGATGG
CTAACTGCCATTGCCGGACGTGTGAAGGAGAGGTGACGTTGCCCTTT---------GTCCCGATCTTGCCACCGATGCTC
GCTGTCGGTGCTCAGTCG-----------------------TCGATGAGAGTGTGAAGAGAGGAGAGAGTGAGCCATGGG
AGAAGGGTGCGCGGATTTATGGCGCCGCTTCCGGAAACAACACGACGTCTCCCGCGTGTCCCCACGCGTACATCCGCATC
CACCACACATGCGTTGTGTTGCATCGCTCAGACCTAGCTCTTAAAAAAACTGCCGATTCAAGCGTTTTTCGGAAGCCATG
TTGAGAAATGCTTTAAGTTTCACATGGATCGAGAATAGAAGTCCAAACAGGCTATAACTACGGGTCTAGTTGAGGTATAT
GCACGCTACCAGCAGACGCTCCCTTGCTAAAAACAA--------------------------------------------
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--------------------------------------------------AACTAAACAGACGTCCCCCCGCTGTAGGAA
AAATAATCTTTCTCAGGGACTGTCAAAAAAAAA----------TCACGCTCCACCGGCCCCTGCCCGGGATGAGAAATCC
AACGGCGGCCGATGCCGTCAGCGAGTTGGCGGAGCTGGTCCTCCCGTGGCTGCCGCCGCCCGACCTTGCCGCCGCGGCTT
CCGCCAGCCGCGCCATGCGAGCGGCCGCGTCTGCCGTCACCGCCCGCCGCGCCGCCGACTCGGCTCGCGGCCTGGAGGCC
TTCCCTGCCCCCTTCGTCAACCCCATCGACTCCCAGCCCTACTCCTACTTCATCTACACGCCCTTCTCCCTCATACCTTC
CGCGGCCTCCTTCCACGCGCAGCCGTGGGGCTGCGCATGGTCCCGGACTCCGGGTCCTACCTGGCCCCGCCCCGACCTAG
GCCTCCCCTTGGCCGGCTGCTCGTGCGCCCGGGGGGAGTGC--GGCGGCGCGGCGTGCGCGTGCGCCGACGCGGAGGCCG
AGGCGGCGGATGCGTCGGGGGC-GGGTATGGCGAGCCTCAGCGAGTGCGGCGACGGGTGCGCGTGCGGGCCCTCGTGCGA
GAACCGGCGGACGCAGCGCGGCGTCACGGTGCGGCTGCGCGTCCTG----CGCCAACTGAAGAAAGGGTGGGCGCTGCAC
GCCGCCGAGGTCATTCACCGCGGCCAGTTCGTCTGCGAGTATGCCGGTA------------CGATTCTAGAATACACCCC
TCCCTAGTTCCGATGACGCTGCTGAATCCTTGT-CAAAATTGTCGATCAATGAATGCTAGA---TTGATGATTTATGAAT
TTACACTAGAGTATGCAAAGTCATGA--------TTT-CCCTTACATATTTGTCAAACGATGATGCTTG----GATGCAG
AT-AAGTTCACCTGCAGATGTGCCTCACAACTGATCCCCGTGGTCAGTTTTGGTCTCAGTATGGTGTATTAGTTGTGACT
CTCGTGTTTGTTTCGGTTTACACTGAATTGCGTCAAGGCTTCAAAGAAAATCAACGGACTTGATAATTAGTTGCTTAGAG
GGCAAGAACTTGCTACTGTATCGTGGTTCATGTCAAAAGCATTTTCAG----GTAGGATAGAGGGTCCCTTGAAAATATC
TGAAAGAATCATGCACTTCGAGTGTAAGGTGTGGTTT---------GGGATAGGTATCTGTATGCAGTAATGATGTGCTA
ATCTTGATAAATATTTGAAGGAGGTTTGGAATATGGAAGCCCAATCTCCAGTTTTATCTGAACAGAATCAT-AGAGTTTA
GAGTGCACACCAGCAATGCAAATGCCTACTTTGTGGGTGGCTAGAAAATTATTGTTCTGCATTAGAGCATTGTTGTTTGA
AAAAACTGAACTTCATATACCAATGACTGGGATCACTGAAAATTCATGTGAGCCCTCATCATCTTTACCTGGCATCATCT
ATGAGCTACTCAAGTTTTGGGTACTTCCCAAATACCGTTTGTTGTTGG---CCTACTCCATTGGTTTGTTAGGCTGCATT
TATTGTTAAATCCCTTTTGAATTGTGAAGGGCTGCATATAAAGTTCTTTTTGGCTCGGCGGTCGGGTGTGCTTATGTTTT
GG--------------------------TGACTAGATTACTTCGTATTCTGAATGGCAGACTGAGCTTACCATTTTCCAG
TTTTTAATCTGAAAGACAAATATAAGGGCTGTAGCCTGTGGGAATTAGAGGGCTGATTGGAAAATCCCTTTCGTAATCTT
CACATAACTTTCTTTAGGTCAGCTTTAGCTTACATTGGTTTATTAATTGCGGGTTATGTTCCTGCCAACATTGACTTTAA
CTATGCTATATTTATGTTTGAATTATTATAGGTGAGTTCTTGACAACAGAAGAAGCCCGGAGGAGGCATAGGCTGTATGA
CGAGCTTGCCTCGGTTGGTAAGCTCTCTCCTGCACTCCTGGTCATACGAGAGCATCTTCCTTCTGGGAGAGTATGCATGC
GAGTTAACATTGATGCAACAAAAGTGGGAAACGTGGCTCGTTTCATCAACCATTCATGTGACGGAGGCAACCTGCGCCCT
ATCTTAGTGAGGAGCTCTGGCTCGTTGCTCCCAAGGCTCTGCCTTTTTGCTGCCAGAGATATAGTGGACGGGGAAGAGCT
CGCCTTCAGTTACGGGGATGCTAAACCCAATCCTAAGGGCTTACCGTGCTTCTGTGAAAGCTCGTGTTGCCCTGGTGTAT
TACCTGCAGAAGAAACCTAAGTTCGTCTCATCGGTTGTAATTCCTTCCAAGCAAATTTTGTTATGCGCTGTTTGTACTTT
ACAAGAATGTTGGCTAGCTTCTGGATGAGTTATTATTCCTTCATTTCATCAGTTGTAATTCGTTCCTAACAAATTTCATG
TATTCCTTTTAATATGACATCAATTGTAACTGCCGACTTTGTAACAAATTGGATAATGTACTCTTTCTTAACAAGAGATT
TGCTGCAAGGGAAGTAAACTTGCACAACAGATCGATTCGCCACGAGAATGAGGCTTGTTTCTTACTAAAACCTGCATTGT
CTCTTAAATATGTTGACAATGGAGTCTGTGTTGTCAGTTGGGCACACATTCCCTTCCTCTGTTCCGTTGTCTCTTCTCTG
GTTTATGTTTCTACTTTCAATTTTAGAAATATTTCAGCAACAATCGAAATCACCAA----------AATTCAGTGTTCTT
GGTTTGCATTTTGGCTAAAGGGCTGAAACATTCACTAGAATTCAACCAAACATTTGATTTTTTTTTGAAAAATATTTAAA
TATCGTGTATTACTGAAAGTGC--AAC-GTTTTGACTGAAAGGCAAATATTTTAGTGTCCAA------------------
TGAAATCACTGAATTTTATTGAAATCTCATTGAAAGTGAAAACCATACACTGTGCCATTTGCATCAAATGTGCGATTCCG
TGAATCTTTCACGAGAAAATTGATACTCCCTCCGTCCCATAATGTAAGAACGTTCTTACATTATGGGACGGAGGGAGTAG
ATCCGAGAGAAGTTGAGCTTGGTGTGGTTTCTAGCTTCACGGCAACAAGGC-AAACAGCTCCCGAGCTAACCACACTACC
GTTGTCTTCCGTGAGCGTGATATCCGCGGCCCCGCGCGGCACGGACCTCATAAATCTTGCATGGACACCACCGGGGTTCC
GGCGAGCGAGGACCCACCCACCAGCTGCCACCCCTTTTAAAACTCGCCGCCCGGCTCACGCCACGCGCGCTGCCGTGGCG
CACGCGCATGTA
>chr3A_1
TCATGGAAATGGTCATAGTTCTTACGCCTCTTCGGGGCAGTGCGAGCTCCACCATCGCCTTGCCCTTCTTGTCAAACAAA
ACCTTCTTGCCCTTTGAGGAGTTCCCTGAAGCTGCATTGTCGAGGACAAGCTTGTCATTCTGCATTGAACATATGAACAA
CAGGAAGGAACCTTGATCTATGCTCAAAATGTACTACCTTGACCGGTGAGCATGCATACCATTCCTAGTAGGCACTTTTA
TTCCTACTCTAGTCATAATCACAAAGCATGGAAGCACGCAGTATGGATTAAGCCGATTAGAGGTGAATCAAATCGGGTCA
GATTGAAGCAAAAAAAAACCTGATCAGATGCACTTTGTTCAGTCTCAAATCGAAGCCTACAGTAACTGATGCCTAAATCG
ACCACTACAACTACAATTGATGCCCAAAGTCGAAGCCTACAACTACAATTGATGCCTAGATCAGCGACTACAACTACAAT
TGATGCCTAAATCGAAGCCTACAACTACAATAGATGCAAATCAAAGGGTACAACTACAATCATGTAAAATGGGTAGATAG
CTAACCGCCATTGCCGGACCCGTAAAGGAGAGGTGATGAGACCGTCGTTGCCTTCCGTCCAGATCTTGCCACTGATGCTC
GTGGTCGATGCTCCTCATCTAGATCTTTGTGGTCTCCGCCTTCGATGAGAGTGGAAAGAGAGGAGAGAGTGAGCAATGAG
AGAAGCGTGCGGGGATTTATGGCGCCGCCTCCAGAAACAACACGACGTCTCCAGCATGTCCCCACGTGTACATCCGCCTC
CACCACACATGTGTTGTGTTGCATGACCTAACTCTTGAA---AAAAGAATTGCCGATTCAAGAGTTTCTTCATAGCCATG
TCCAGAAATGTTTTAAGTTTCACATGTG-------------------------------------------------TAT
GCACGCTATGAAAAGATG-TCCCTTGCTAAAAACAACTAGCTAATTGCCCGTGCGTTGCAACGGGGCCACACTAACTTTA
AGAGTTAAATATTAACCATGTTAATAATACATTTAGTATACATATCAAATGACATTGGCGACCTTTTTTACCATCAAATC
CTCACACACACTCTCTCTCCCTCTCTCTAGCCCTCTCCCTCCCTCTCTCTCCCTCTCTCTCTCTCACACACACACATCCA
TTTTTATTGGGTGTGGGACCATAATCCATTTATGCTATTTCCTACCTAGTGCAACCGAATTCTCAAGACCCTTCTGTTCC
TTGCATCAATTAATTTGAGACCCAATTATACAAATACTAATTGTCAGAATTTGCTCTTTTTTAGATTGACACTTTCTCAT
ATTTGACATCCACCTTATTCACACTAATGTATAACAATATGGATGATGGGTATTATATTTGCCACTACAATGAAGGGATT
TAATTTCATGTAAATCGGCTAGCCACAACTCCATGACAAACAATATATCTAAATTATACATAAGATGCATTATTTATACT
ATTTATTGAATGTGTTCAAACTATTACTTGAACTTGCTACCACCAAATGATAGCAATTAGCCAATGACCTATGTGTTTCG
GTGCACCTTTGTAAAATATAGAAACTGCTCGTGTGACAAAAAGAAGATACTGAGTGAACATATGGAAAGGCCTTGTGTGT
AGTAGAAATGAATTAATAAAATCAGAAGACTACAAGTAGTATATTTATTTTTACCCCACAAAAAGTACTACCCCTGTATA
TTTGTTTACAGAGGGAGTAGTATATTTATTCTTCACAGGAGCAACATATGAAAAGAGATGATGTTCCATCCATGTATGTA
TGAACAAATTATACAGACTGTTTGTTATAGAAGTTTCATCTTAAAAATACTATCATATAAATACAAAGACCTACTAAATA
TCGCAAGCATGCGACTGAATATTATAGGACCAACTTTTACCAAGTACTATACTGTTACTTTTGGTGTCCACAAAATGCGG
TGAAGTAATTTTGAGGAAAAAATGCAGAGTTGTCCAAAACAATTAACCACTATACTTGATGTAGAAGATGATGAAAGTAT
AAACTTGTTGACGGCAATGCCAAATGAAACTTAAAGAACACCACCCGTACAAGGATTAAAATCTACAATCATACAAACTC
AGCTTCAACATGATGACATGTTGAATGTAGACGTCCTCTTGCCTGCCTTCTCAATCCTCATGGTATCCTCTCCCACCTTA
ATTGCCTTCTCTAATCTTCATCTTACCCATGTGTTGCGGCTCGTTCCAGAAAGAAATAAAACATGAGCTGCCGTGACTTG
CAAGGAGCATGTATGACCAATTTTCTTAGTATTAGTTCATAGCGGAAATCAAGGAATATCAAAGCAATTGTTCAATCACC
TTTGAGTCTTTAACATCTGATTAGAATGTGGTGCCTGTGTAGGCGAGGTGGAGCCGTAGAGGATATGGCAACCTAGCCAC
TTTGATAGTAGAGAAAACCACAGACAGAACCTCCTCTTCGCACTCATCTTCCCATGGGAGTGGACGTATACGTCCCTCTC
CCTCGCTCCGAGCTCTACTGATACAAGCCACACATGCTAGCTAGCAATGGCCGTTTTTTTATGCACGCTGAAGCTGGATG
ACCTCCCCACGTTATTGTCGCGTGAGATCCTAGCGAACATAGGCATCGCAGCCCTGCAACATTAGGGCTCAGACACACAT
GTCGTCTGTCGATCGCCTCCCCACCACCTCGGCACACCGGCCTGTGCGCTGCCCCCTACAGCATAAAGGTCGACCGACCT
CAAGCAAGCACGTCCTTCGACCACCGCCGCTGCCGCGCCAATTCAGCACACCACGCACGTCGATGCCGTGTTCTGCGTTC
ATGCGTCGTCGCCGCGGGGCACAGTTGTGGGCCCCATGCAACTCGACGAGGCACTCCGCGTTCATGTGTCGTTGCCGCCG
AGCGCCATTCCAAGAGAGATGGCCAAGAGGAGAGAGATGACGTAGGCTTAGGAAGAGAGGATGAATGGGTACTTCATGTC
TGGCCTCTGATGCACCATAAGAACGTCGCGTTGCTGTCCCGGCGCCGCTCAACCTGTCACGCCGCCACAGGAGAATACAC
GAGATGGGGGAGGGGATAGGGTTTCTCCGGTTGGATCGTGGATCGGGAGTCGGATCGCTCGACCGTGGGCGAAACAAAAT
GGGCGCTCAGGACGGCGTGGTGTTGTGACATGATCCCAACATCACGTCATAGGGATCTAGACCAACACCATGTCGCGTAG
GTGATATATGCCTAGTATGAATTTGGCATTGGCAAGAGGTAAACGACGGTGATGTAGAGGTTAATTGTTTCCTTTGTTTG
GAGATTGGTTACCGCCCGTGAGCTAAGCTACGCTACTAAAGAAGAATCTGATTGTGATACGTGAATTGATTTTTGTTGCC
TTGTATCGTTTAGTTTTGGTATTTGAAGATTGATTACCATCCGTCAGTTAACCTGGGTTACCAAAGAAGAAATCAATCAC
CATAGAATTCATTGTGTTACCAAATAAATGTGGGGTTTGTCTGACCATATTACCAAATAGAGGTTGTTTTTGTCTTGCCA
GATGAGAAAACCAGCTAAAACCGGTGAAGGGAGGCCGAAAAATCGGTGAAGGGGTAACGGTCATACGAGGAGGGGCTTGA
CTAAAGATGTGACGACGTAAGAGGGGGGAGAGGGAACCTTATGTTTCTTTTAGGTAGTAGAGATTAATGTGATTGAGCGT
TTTTTCTTAAAATCAATTATTTTGTTTTCTAATTAATGTGATTGAGCGATTTAAGGTAATATTAATTAATTTAAATTTGG
TCTTTAGAGATTGATCGTGATTGATTCTACATTAATAAATAATTTGCGTCAGTATGAAAAATTCTGATATGTTCATATTT
CTTTCATTGTGTAAGAGGATGACGCGAAAATAAACCGATGAAATGGAGGAGGGGATGAAAAAAACCTAAAAAAACCTACG
AAAAATACTAGCGAAAGTGGAAGGTGGTATAGCTAGCCAAACGGGTCGGCCCGGCCCGGCACGGCACGGCCCATCCTAAT
CGTGCCTGGCACGACCCGGCCCGCGAAGGCACGATTATTATACGGGCCGTGCCGTGCCGGCCCGCGTGCTGCAGCCTGCA
GCCCAGGCACGGCTCGTATGCTAATCGGGCCGGCCCACCGGCACGCTAGGCCCGCTAATCTGCCTCCTATTTTACGCACT
GGGTGTTTTTTAGTTTATTTTTACATGTTGGGCCACATTAAGATACATAAAACAATAAAAAAAGATAATTGGATCGTGCC
GTGCTGGCCCACGTGCTCGGCCTTCAGGCCCAAGCATAGTCCTTGACATGCCGCGTGCCGGGCCTGGCCCATTTAGCACG
TGTCGTGCCGTGCCGTGCCGGCCATGCTACCGGGCCGGCCCAGCTATCCTGGCCCGTTTGGCCACCTATAGAAAGTGGGA
CGAAAAAGATTCGAAACGGAGGCTACCAACTGCTCATTAGGAGTAGAGAAAACTAAACGGACGTCCCCT-GCTGTAGGAA
TAATAATCTTTCTCACGCTCCAGTTTATCAAAAAAAATATTTCTCACGCTCCACTGGCCCCTGCTCGGGATGAGAAATCC
AACGGCGGCCGGTGCCGTCAGCGAGTTGGCGGAGCTGGTCCTCCCGTGGCTGCCGCCGCCCGACCTTGCCGCCGCGGCTT
CCGCCAGCCGCGCCATGCGAGCGGCCGCGTCTGCCGTCACCGCCCGCCGCGCCGCCGACTCGGCTCGCGGCCTGGAGGCC
TTCCCTGCCCCCTTCGTCAACCCCATCGACTCCCAGCCCTACTCCTACTTCATCTACACGCCCTTCTCCCTCATTCCTTC
CGCGGCCTCCTTCAACGCCCAGCCGTGGGGCTGCGCATCGTCCCGGACGCCGGGCCCCACCTGGCCCCGCCCCGACCTAG
GCCTCCCCTTGTGCGGGTGCTCGTGCGCCCGGGGGCAGTGC--GGCGGCGCGGGGTGCGCGTGCGCCGATGCGGAGGCCG
AGGCGGCGGATGCGTCGGGGGC-GGGTATGGCGAGCCTCAGCGAGTGCGGCGACGGGTGCGCGTGCGGGCCCTCGTGCGA
GAACCGGCGGACGCAGCGTGGCGTCACGGTGCGGCTGCGCGTCCTG----CGCCAACTGAAGAAAGGGTGGGCGCTGCAC
GCCGCCGAGGTCATTCACCGCGGCCAGTTCGTCTGCGAGTATGCCGGTA------------CGATACTAGAATACACCCC
TCCCTAGTTCCGATGACGTTGCTGAATCCTTGT-CAAAATTGTCGATCAATGGATGCTAGA---TTGATGTTTTATGAAT
TTACACTAGAGTATGCAAAGTCATGA--------TTT-CCCTTACATTTTTGTCAAACGATGATGCTTG----GATGCGG
AT-AAGTTCACCTTCAGATGTGCCTCACAACTGATCCCCGTGGTCAGTTTTGGTCTCAATATGGTGTATTAGTTGTGACT
CTG-----TGTTTCGGTCTACATTGAATTGCGTCAAAGCTTCAAAGAAAATCAACGGACAAGATAATTAGTTGCTTAGAG
GGCAAGAACTTGCTGCTGTATCGTGGGTCATGTCAAAAGCATTTTCAGTCAGGTAGGATAGAGGATCCCATGAAAATAAC
TGAAAGAATCATGCACTTCGGGTGTCAAAAGCATTTTCAGTCAGGTAGGATAGGTATCTGCAGGCAGTAATAATGTGCCA
ACATTGATAAATATTTGAAGGAGGTCTGAC-TATCGAAGCCCAATCACCAGAACAT---------AATCATAAGAGTTTC
AAGTGCAC-CCAGCAATGCAAATGC-TACTTTGTGGGCGGCTAGAAAATTCTTGTACTGCATT--TA-------------
-------GAACTTAATACACCAACGACTGGTATCACCTACAATTCATGTGAGCCCTCATCATCTTTACCCTGCATCGTCT
CTGAGCTACACAAGTTTTGGGTACTTCCCAAATAGCGGTTGTTGTTGCTGTCCTGCTCCATTGGTTTGTTAGGTTGCATT
TACTTTTAAATCCCTTTTGAACT---------TGCATATAAAGTTATTTTTGGCTCGGTGGTCAGGTGTGCTTATGTTTG
GTGGTTGTAGCAGGAGCATGGTGACTACTGACTAGATCAGTTCGTATTCTGAATGGCAGACTGATCTTACCATTTTCCAT
TTGTTAATCTGAAAGATAAATGTAAGGG-------TCGTAGGAACTAGAGGGCTGATTGGAATTTTTCTTTTGTCATCTT
CACATAACGTTCTTTAGGCCAGCTTTAGTTTACATCGGTTTATTATTTATGAGTTATGTCCATGCTGACATTGACTCGGA
CTATGCTATTTATGTTTGG-----ATTATAGGTGAGTTCTTGACGACAGAAGAAGCCCGGAGGAGGCATAGGCTGTATGA
CGAGCTTGCCTCGGTTGGTAAGCTCTCTCCTGCACTCCTCGTCATACGAGAGCACCTTCCTTCTGGGAGAGTATGCATGC
GAGTTAACATCGATGCAACAAAAGTGGGAAACGTGGCTCGTTTCATCAACCATTCATGTGACGGAGGCAACCTGCGCCCT
ATCTTAGTGAGGAGCTCCGGCTCGTTGCTCCCAAGGCTCTGCCTTTTTGCTGCCAGAGATATAGTGGACGGGGAAGAGCT
CGCCTTCAGTTACGGGGATGCCAAACCCAATCCTAAGGGCTTACCGTGCTTCTGTGAAAGCTCGTGTTGCCCTGGTGTAT
TACCTGCAGAAGAAACCTAAGTTCGTCTCATCGGTTGTAATTCCTTCCAAGCAAATTTTGTTGTGCGCTGTTTGTACTTT
ACAAGAATGTTGGCTAGCTTCAGGATGAGTTATTATTCCTTCATTTCATCAGTTGTAATTCGTTCCTAACAAATTTCATG
TATTCCTTTTAATATGACATCAATTGTAACTGCCGACTTTGTAACAAATTGGATAATGTACTCTTTCTTAACAAGAGATT
TGCTGCAAGGGAAGTAAACTTGCACAACAGATCGATTCGCCATGAGAATGAGGCTTGTTTCTTACTAAAACCTGCATTGT
CTCTTAAATATGTTGACAATGGAGTTTGTGTTGTCAGTTGGGCACACATTCCCTTCCTCTGTTCTGTTGTCTCTTCTCTG
GTTTATGTTTCTACTTTCAATTTTAGAAATATTTCAGCAACAATCGAAATCACCAA----------ATTTCAGTGTTCTC
GGTTTGCATTTTGGTTAAAGGGCTGAAACATTTACTAGAATTCAACCAAATATTTGATTTTTTGAAGAA--------AAA
AATCGTGTACTACTGAAAGTGTTAAAATGTTTTGACCGCAAGGCAAATATTTCAGTGTCTAC------------------
TGAAAT-------------------CTCACTGAAAAGGAAAACCATACACGATGCCATTTGCATCAAATGCGCGATTCGG
TGAATCTTTCATGAGAAAATTGATT------------------------------------------------------G
ATCCGAGAGAAGTTGAGCTTGGCGTGGTTTCTAGCTTGACGGCAACGAGGC-AAACAGCTCCCGAGCTAAC---ACTACC
GTTGTCTTCCGTGAGCGTGAGATCCGCGGCCCCGCGCGGCACGGACCTCATAAATCTTGCATGGACACCACCGGGGCTCC
GGCGAGCGAGGACCCACCCACCAGCTACCACCCCTTTTAAAACTCGCCGCCCGGCTCACGCCACGCGCGCTGCCGTGGCG
CACGCGGATGTA
>chr3B_975
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-------------------------------------------TCACGCTCCACCGGCCCCTGCCCGGGATGAGAAATCC
AACGGCGGCCGGTGCCGTCAGCGAGTTGGCGGAGCTGGTCCTCCCGTGGCTGCCGCCGCCCGACCTTGCCGCCGCGGCTT
CCGCCAGCCACGCCATGCGAGCGGCCGCGTCTGCTGTCACCGCCGCCCGCGCCGCCGACTCGGCTCGCGGCCTGGAGGCC
TTCCCTGCCCCCTTCGTCAACCCCATCGACTCCCAGCCCTACTCCTACTTCATCTACACGCCCTTCTCCCTCATTCCTTC
CGCGGCCTCCTTCAACGCCCAGCCGTGGGGCTGCGCATGGTCCCGGACGCTGGGTCCCACCTGGCCCCGCCCCGACCTAG
GCCTCCCCTTGGCCGGGTGCTCGTGCGCCCGGGGGGAGTGC--GGCGGCGCGGGGTGCGCGTGCGCCGACGCGGAGGCCG
AGGCGGCGGATGCGTCGGGGGC-GGGTATGGCGAGCCTCAGCGAGTGCGGCGACGGGTGCGCGTGCGGGCCCTCGTGCGA
GAACCGGCGGACGCAGCGCGGCGTCACGGTGCGGCTCCGCGTCGTG----CGCCAACTGAAGAAAGGGTGGGCGCTGCAC
GCCGCCGAGGCCATTCATCGCGGCCAGTTCGTCTGCGAGTATGCCGGTA------------CGATACTAGAATACACCCC
TCCTTATTCCATATGACGTTGCTGAATCCTTGT-CAAAATTGTCGATCAATGATTGCTAGA---TTGATGATTTATGAAT
TTACACTAGTG--TGCAAAGTCATGA--------TTT-CCCTTGCATTTTTGTCAAACGGTGATGCTTG----GATGCAG
AT-AAGTTCACCTGCAGATGTGCCTCACAACTGATCCCCGTAGTCAGTTTTGGTCTCAATATGGTGTATTAGTTGTGACT
CTCGTGTTTGTTTCGGTTTACACTGAATTGCATTAAAGCTTCAAAGAAAATCAACAGACTTGATAATTAGTTGCTTAGAG
GGCAAGAACTTGCTACTGTATCGTGGTTCATGTCAAAAGCATTTTCAGTCAGGTAGGATAGAGGATCCCATGAAAATAAC
TGAAAGAATCATGCACTTCGGGTGTAAGGTGTGATTC---------AGGATAGGTATCTGTAGGCAGTAATAATGTGCCA
ACATTGATAAATATTTGAAGGAGGTCTGAC-TATCGAAGCCCAATCACCAGAACAT---------AATCAT-AGAGTCTC
GAGTGCACACCAGCAATGCAAATGC-TACTATGTGGGCGGCTAGAAAATTCTTGTACTGCATTATTA-------------
-------GAACTTAATATACCAACGATTGGTATCACCGACAATTCATGTGAACCCTCATCATCTTTACCTTGCATCATCT
CTGAGCTACTCAAGTTTTGGGTACTTCCCAAATAGCGGTTGTTGTTATTGTCCTACTCCATTGGTTTGTTAGGTTGCATT
TATTTTTAAATCCCTTTTGAACT---------TGCATATAAAGTTATTTT-GGCTCGGTGGTCAGGTGTGCTTATGTTTG
GTGGTCGTAGCAGGAGCATGGTGACTACTGACTAGATCAGTTCATATTCTGAATGGCAGACTGAGCTTACCATTTTCCAT
TTGTTAATCTGAAAGATAAATGTAAGGG-------CTGTAGGAACTAGAGGGCTGATTGGAATTTTTCTTTTGTCATCTT
CACATAACATTCTTTAGGTCAGCTTTAGTTTACGTCGGTTTATTATTTGTGGGCTATGTCCATGCTGACATTTACTTTTA
CTATGCTATTTATGCTTGG-----ATTATAGGCGAGTTCTTGACGACAGAAGAAGCCCGGAGGAGGCATAGGCTGTATGA
CGAGCTTGCCTCGGTTGGTAAGCTCTCTCCTGCACTCCTTGTCATACGAGAGCACCTTCCTTCTGGGAGAGTATGCATGC
GAGTTAACATCGATGCAACAAAAGTGGGAAACGTGGCTCGTTTCATCAACCATTCATGTGATGGAGGCAACCTGCGCCCT
ATCTTAGTGAGGAGCTCCGGCTCGTTGCTCCCAAGGCTCTGCCTTTTTGCTGCCAGAGATATAGTGGACGGGGAAGAGCT
CGCCTTCAGTTACGGGGATGCTAAACCCAATCCTAAGGGCTTACCGTGCTTCTGTGAAAGCTCGTGTTGCCCTGGTGTAT
TACCTGCAGAAGAAACCTAAGTTCGTGTCATCGGTTGTAATTCCTTCCGGGCAAATTTGGTTATGCGCTGTTTGTAGTTG
ACAAGAATGTTGGCTAGCTTCAGGATGAGTTATTATTCCTTCATTTCATCGGTTGTAATTCGTTCCTAACAAATTTCATG
TATAACTTTCAATATGACATCAATTGTAACTGCCGACTTTGTAACAAATTGGATAATGTACTCTTTCTTAACAGGAGATT
TGCTGCAAGGGAATTTAACTTGCACAACAGATCGATTTGCCACGAGAATGGGGCTTGTTTCTTACTAAAACCTGCATTGT
CTCTTAAAGATGTCGACAATGCAGTTTGTGTTGGCAGTTGGGCACGCATTCCCTTC------------------------
--------------------------------------------------------------------------------
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>chr6D_1221
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-------------------------------------------------TCATCTACACATCCTTCTCCTTCATTCTTTC
CATGTCCTCCTTCCATGCTCAGCCATGGGGCTACGCA-GGTCCCGGGCG----------CCGGGCCCCGCCGCGACCTAG
GCCTTCCCTTGACTGAGTGCTCTTGCGCCCGGGGGTGTGCGGTGGCAGCGCAGGGTGCGCGTGTGCCAACGCCGAGGTCG
AGGCGGGGGATGCCTC-GGGGC-GAGGATGGGGAGCCTCAGCGAGTGCGGAGACGGGTGCGCGTGTTGGCCCTCGTGCGA
GAACCGGCGGACACAGCGTGGGGTCACGGTGCGGCTGCGCATCGTGCACTCGCCAACGGAAGAAAGGGTGGGCGCTGCAC
GCCGCCGAGGCCAGTCACCACGGGCAGTTCGTCTGCGCCGATATATCCTTTTTAAAGTTGTCGATGATTGAATGCATCCC
TCCATAGTTCGGATAT---------ATCCTTTT-TAAAGTTGTCGATGATTGAATGCTTGA---TAGGTGATTTATGAAC
TTACACTGGAGTACGCAAAGTTGTGA--------TTTACCTTTACATTTATGTCA-------------------------
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------------
>chr7A_1257
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-----CCTCCTTCCGCGCACAGCCGTGGGGCTGCACACGGTCCCGAACG----------CTTGGCCCCGCCCCGACCTAG
GTCTCCCCTTGGCTGGGTTGCGCACATC----GGGTGTGCGGCAGCAGCGAGGGGTGCGTGTGTGCCAACTCCGTTGTCG
AGGCGGCGGATGCCTC-GGGGCAGAGGATGG-------------GTGCGGTGACGGGTTCGCGCGTTGAACCTCGTGCGA
GAACCAGCGGACATAGCGCGGCGTCAGAATACGGTTGCGCGTTGTG----CACCAACGGAAGAAAGGGTGGGCGCTGCAC
GCCGCCGAGGCCATTCACGACGGGCAGTTCGTCTGCGAGTATGCCG--------------------CCACAATGAATCCC
TCCTTAGTTCTGATTA---------ATGTTTTTCCAAAGTTGTCGATGAATGAATTCTTGGTGGTAGGTGATTTATGAAC
TTATACTGCAGTACGCAAAGTCATGCTATATGTTTTCATTTTTCATTTTTTGTCAAACGATGATGCTTGCTTGGATGCAG
ATAAAGTTCACCTTCAGATGTGCCTCACAACTGATCCCCGGGGCCAGTA---GTCTCAACATGTTGCATTAGTTGTGACT
CTTGTATTTGTTTCGGTTTACACTCAATTGCGTCAAAGCTTCAAAGAAAATCAACTGACTTGATAA--------------
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------------
>chr3B_3466
TCT-----------------------------------------------------------------------------
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---------------------------------------------------------TCTGTTGTGTTGTCTCTTCTCTG
GTTTATGTTTCTACTTTCAGTTTTAGAAATATTCCAGCAACAACCGAAATCACCAATACCCAGTAAATTCCAGTGTTTTC
GGTTTGCATTCTAATGAAATCACC--AACATTCATTAGAAATCAACCAAATATATGATTTTTTTTTGAAAATAG------
----------------AAGTGC--AATTTTGTTTACTGAAAGGCAAATATTTCGTGTCTACCAAAACCACTGGATTTCAT
TGAAAT-------------------CTCACTGAAAATGAAAACCATG-ACGACGCCATTTGCGTCAAATGCGCGATTCCG
TGAATCTTTCATGAGAAAATTGATT------------------------------------------------------G
ATCCGAGAGAAGTTGAGCTTGGTGTGTTTTCTAGCTTGACGGCAACAAGGCAAAACAGCTCCCGAGCTAAC---ACTACC
GTTGTCTTCCGTGAGCGTGAGATCCGCTGCCCCGCGCGGCACGGACCTCATATATCTTGCATGGACACCAGCGGGGCTCC
GGAGAGCGAGGACCCACCCACCAGCTACCACCCCTTTTAAAACTCGCCGCCCGGCTCACGCCACGCGCGCTGCCGTGGCG
CACGCGCATGTA
>SNPs
--------S-----------------------------SS----------------S-------------------S---
--S-------------------------------------S------S----------------------S---------
----SSSSSSSS-S----------------------------S-S--------------S----------------S---
----------S-------S---------------------S----------S-----------S-----------SS--S
---S--------------S------------S---S----S---------------S-S--SS-----------------
-----------------------------------------S--------------------SS---S------------
S-----------------S------------S-----------------------------------------S----S-
-----S-------------SS--S------------S-SSS--S-SS-------------S-----------S-------
-SS----S-----SSSSS-----------------------------------SS-------------------S---S-
-----S-----S----------------S---S-------------------S--S----------S----------S--
-----------S------------SS-SS-SSS--S-SSSSS----S--S------------S----S-SSSS-------
-SS-------S---------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---
--------SS-SS---S-S-------------------------------------------------------------
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----------------------------------------------------------S---------SS----------
S--------------S-SS-SSSSSS-SS---------------------------------------------------
-----------S--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------S-----
------------------S-----------------------------S--------S----------------------
----------------S------------------------------------S--------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------S--------------
------------------S-------------------------------------------------------------
-----------------------------------------------S--------------------------------
----------------------------------------------------------S---------------------
------------------------------------S-------------------------------------------
----------------------------------------------------------------S----S--------S-
--------------------S------------S------------S---------------S--------S------S-
-SS----------------------S--SSS---S-----------S----SSSSSSSSSSSSSS--------------S
-------------------------S-----------S------------S----S--------SSSSSSSSSSSSSSSS
SSSSSSS------S---------S------S-----S--S------------------------------S---------
S---------------------------------S--S---------S-------------------------S------
----S----------------S-SSSSSSSSS-------------S------------S----S---------------S
-S-----------------------------------S-S---------------------------------------S
--S-------------S----S------SSSSSSS----S----S-----------------SS-SS----S--S-----
--------S-------------------S------S---------S---S---------S-S---SS-----------S-
---------S-S-S-S-SSSSSSS--------------------S-----------------------------------
---------------------------------------S--------------S-------------------------
----------S---------------------------------------------------------------------
-----------------S--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------S----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------S--------------------------------------S---------------
-------------------------------------------------------------------S-----------S
--------------S-----------------------------------S--------------------SSSSSS---
S--------S----------------S-------------------------S------S-S------------------
------SSSSSSSSSSSSSSSSSSS----S-----S--------------SS------------------S---------
-----------S------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-
-------------------------------------S---------------------------------SSS------
--------------------S-------------------------------------------------------S---
--------------------------S-----------------------------------------------------
------------
>forward_838
--------------------------------------------------------------------------------
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------------------TTGCATCGCTCAGACCTAGC------------------------------------------
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------------
>reverse_6274
--------------------------------------------------------------------------------
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---------------------------------GCCTGTGGGAATTAGAGGGC---------------------------
--------------------------------------------------------------------------------
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------------
>forward_5299
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------------C
TCCCTAGTTCCGATGACGC-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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------------
>reverse_7146
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------CTGTGTTGTCAGTTGGGCAC-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------
