>input_sequence_37616
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----------------------------ATGTTCCGGCCCAGAAGCCCGGCGCAAGGCGAAGAAGACTTCGTCAGAAACG
TCGACAGTGTGCTACGC--------CAGCTCAGTCCCACCGACCCCAGGGACAAGTTCGCGCTCGAGTTCAGGTTCATTC
AATCCAAAGTGGAGTGCCATGTCGACCAATGGGTCGCCTTCTGCGCGGCGTCGACGGCGAAGGACATTGTGTTCGATTTT
AATCCGGGGTCATGGGGCACCTACTGGTTCAGCTTCCCACTGAAGCATTTCAGAAATGGTTCTCCTGCCATCAGGTCTCT
ACACCTCATGTCTGTCGACCTGTACCCGCCGGTGGTGCCGCCTGATTTCCGCGGCTTCACAAACCTAAGAGAGCTCAAGC
TCGACTCCGTGCTAGGAGATATCCATTGCCTGCTGCTGCCGGCCTTCTCTGTCCTCGAGTGGCTAAGCATCACACGCTGC
ACCCTCCACAGCTTCAGTACATCCCAGCCGCTGGGTCGGCTGCGTTACATGTGTGTCCAGTACTGTCATATGCACGAGCT
TGAGGTGCAAGCTCCGAACCTTGCTAAGTTCGAGTTTGCCAGCTTTGAGGTCCATCCGGTGTTTGTGCTCGATGAATGCC
TAGACATACAAGAGGTGACTGTCACGGTGCTAACAGAGGAGGATGTTTTCGACTACGCCTTTGCAAAGCTTCCTGCTGGC
GGTATGTCGTATGCACGGAAGCTCTCGATGCGAATTGCTATTGATACCCAGGTGTGTTTGTTCAGTGCTGATTGAAGTTG
ATACCC---------------------CTGTTGTTGTGTTCTACTTCACTGTTGTTTGGCCTCTAAACATTTTCATTCCA
CCTTTATTGCCATTGTTGTCATCCCAGAATATTTCTCATGTCATTGTTGCACGATGTATCAGGTGCTTCAATTTGCAGGA
TGCCCCAGCAGCTTCATCAACCTGAAGCATCTTATATTGACCATGCATGTCCGTGTACGTTATGACTCTACCAGTGGCAT
CCTTCGTTTGGCTTCCCTTTTGGAGTTGGCCCCTGTTCTGGAACAACTGGAACTGCATGTAGGTTTCTCTCATTTCTCTC
TTTTGCATTTACTTGGCCTTTTCTACTGTCATATGCATTTCTCCACCAAGTTAGAAATAGAGATAATATTATAATTCATT
TTAATTTAATTCACTCCCTGTGTGTAGTTAGATGGAGTTTCAGCCACATACACTAGAATTAGGAAAGCTGCTTCCCTCAT
AGTGATTCCTTTTAACTGACGAGTTAGAATAAGGTAACCCATTCAATTAGTTAAGAGTATGATAGGAAAAGTCGTGAAGT
TTTCATTGAATTTGTAAATGTCGTGTATTCTCACACAGTTAAGAAAGTCTAAAATAGTGGCATCTACTCTTAATGGAAGA
CTCTTTACCTGGACATAATTATTTGAATTATAATATGGCAATTATCTCAACAACAATGAATTAGTGTTTCTCTGTACTAA
CCTGGCTATCTAACCATGCTTCTTGGTTACTGACTGAAAATCATAAATACACCCTTGAGAACAACATGGCAATGGGCCAA
GCTCCTTCCAAGCCGACGCTGTGCATTTGTCTTGCACGGGTGCACCGTTTCTGTGACTATGTAGCTATGTAGCCACATCG
AGTGAAGTTTATTGTTTGACATTTTTTGGCATGGTGGTTATGTTTGTTTTAGTCTTTATTGTATTTATAAGTTTGTCTGC
TGCTTTTTGTAGTAAAGATAAATATGACAAATTTACTTCTATTTTAGTTACCCTAGTACAAGTTAGTTGCCTTGGTGAAG
AAATAGAAATGGATGAGTTGGTATATTTTACAATGCAGATGGAATGTCAGTACAGTGAGGGGGTGGAGAACATGTGGCTG
AAGGAGTGGCCCCTGCCCATTCAGCCACACGATCATCTGAAGACGGTCCACATGAGCGGAGTCTACGGCAACATCGACCT
ACTCAATCTGGCGCTGCACTTTGCTCGATGCGCCATGGTGCTGGAGCGCATGGTGATTGGCCCGATGGTGAAGAAGAACT
ACGTGATGACTCGTGACTCACTGGAGGAGGGCCAACAAATGGCCAGGGAGCACCTTAGGGGAAAGGGGTTTGACGGCATT
CTCACCTTCTTGTGA-----------------------------------------------------------------
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--------------------------------------------
>chr4A_1_TraesCS4A01G462700
CAGATCTCCACTCCCACGACATGTATTTCCCATGTAGGATAACCCTCTCGTCAGACTGCCGGTAGTCCTGGAGGGATATG
CTTCAGCGAGAGAGGAAGAATAGCCTCCCTCCGCTTCCGTGAAGCACGAATTAGAGTTAGTTTTTGGGTAGGGCAAGACG
GTTGCCGTGGTCTACGCCCCCGCTCACCGGTCAAGACACGGGCTATGTAACCCGGCGGCGCGGTGGCGGTGGCCTTCGTA
GGACCCAAGCGGCGGCGGCCTCCCATGATCCACTTGTCTTGGCTGTCCACATGGCCGAGGACTTGTCGGCCTCCGCCGAC
ATGGCTTCTATCCCCACCTGCTTGACGTGTAGCCGCCATGGCTTTTATAGTAGGTCTCGGCACACGCACCGGTTTTATGG
AGGTAGGCGGGCAGACGGATGAGTGCACAGTGGGCGGCGCTCTCGGCCGACCTGCCGCTTCAATGCCGGTGGGAGAGGGT
CGGCGTTGGTGACGCCCGGTGCTAGGGCTTGCGGATCGTCGTCGCCGCCGGCCAGGAGAACGAT-GACACCGTGGTTTGG
GTCTGTGGATCCCCGAATCGGAGGTAGGCCGAGCCCCTCCCCTCTCTTCTATCTCTT-CTCCGACCTCAGCGCCGTAGTC
TGGCGCGGCCAGAGCACTAGCAGATCGTTCTCTAATTATTTGCTTCCAGCAACCGAATCCATCGTTCCATTCCTGTCCGT
ATAATCTGATCCAATCCGCACAGTTCAGAGACCGGATTTGGCTTTGATTTGTTGTTTTCTCAATAGATTGCCAGCTGAAC
TTGCCAAAATCAAAAGAAATTGCGGGAGGGGACTGCTTCCGTGATGTCGCGGA---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------CGTAAACTGAACCTTACTTAT-------TACTTATTCCTTGTCTGCACTTGTCGAC-----------------
--------GGGGTTCGCGGACGCCGCGCGCACGAGCGTGCTGTCGAGCAGGTGGAGACAGCTCTGGAGTGCTTGCGACAG
AAGGGCCCTGGTCTTCACCAGAGAGACAATGTTCCGGCCCAGAAGCCCGGCGCAAGGCGAAGAAGACTTCGTCAGAAACG
TCGACAGTGTGCTACGC--------CAGCTCAGTCCCACCGACCCCAGGGACAAGTTCGCGCTCGAGTTCAGGTTCATTC
AATCCAAAGTGGAGTGCCATGTCGACCAATGGGTCGCCTTCTGCGCGGCGTCGACGGCGAAGGACATTGTGTTCGATTTT
AATCCGGGGTCATGGGGCACCTACTGGTTCAGCTTCCCACTGAAGCATTTCAGAAATGGTTCTCCTGCCATCAGGTCTCT
ACACCTCATGTCTGTCGACCTGTACCCGCCGGTGGTGCCGCCTGATTTCCGCGGCTTCACAAACCTAAGAGAGCTCAAGC
TCGACTCCGTGCTAGGAGATATCCATTGCCTGCTGCTGCCGGCCTTCTCTGTCCTCGAGTGGCTAAGCATCACACGCTGC
ACCCTCCACAGCTTCAGTACATCCCAGCCGCTGGGTCGGCTGCGTTACATGTGTGTCCAGTACTGTCATATGCACGAGCT
TGAGGTGCAAGCTCCGAACCTTGCTAAGTTCGAGTTTGCCAGCTTTGAGGTCCATCCGGTGTTTGTGCTCGATGAATGCC
TAGACATACAAGAGGTGACTGTCACGGTGCTAACAGAGGAGGATGTTTTCGACTACGCCTTTGCAAAGCTTCCTGCTGGC
GGTATGTCGTATGCACGGAAGCTCTCGATGCGAATTGCTATTGATACCCAGGTGTGTTTGTTCAGTGCTGATTGAAGTTG
ATACCC---------------------CTGTTGTTGTGTTCTACTTCACTGTTGTTTGGCCTCTAAACATTTTCATTCCA
CCTTTATTGCCATTGTTGTCATCCCAGAATATTTCTCATGTCATTGTTGCACGATGTATCAGGTGCTTCAATTTGCAGGA
TGCCCCAGCAGCTTCATCAACCTGAAGCATCTTATATTGACCATGCATGTCCGTGTACGTTATGACTCTACCAGTGGCAT
CCTTCGTTTGGCTTCCCTTTTGGAGTTGGCCCCTGTTCTGGAACAACTGGAACTGCATGTAGGTTTCTCTCATTTCTCTC
TTTTGCATTTACTTGGCCTTTTCTACTGTCATATGCATTTCTCCACCAAGTTAGAAATAGAGATAATATTATAATTCATT
TTAATTTAATTCACTCCCTGTGTGTAGTTAGATGGAGTTTCAGCCACATACACTAGAATTAGGAAAGCTGCTTCCCTCAT
AGTGATTCCTTTTAACTGACGAGTTAGAATAAGGTAACCCATTCAATTAGTTAAGAGTATGATAGGAAAAGTCGTGAAGT
TTTCATTGAATTTGTAAATGTCGTGTATTCTCACACAGTTAAGAAAGTCTAAAATAGTGGCATCTACTCTTAATGGAAGA
CTCTTTACCTGGACATAATTATTTGAATTATAATATGGCAATTATCTCAACAACAATGAATTAGTGTTTCTCTGTACTAA
CCTGGCTATCTAACCATGCTTCTTGGTTACTGACTGAAAATCATAAATACACCCTTGAGAACAACATGGCAATGGGCCAA
GCTCCTTCCAAGCCGACGCTGTGCATTTGTCTTGCACGGGTGCACCGTTTCTGTGACTATGTAGCTATGTAGCCACATCG
AGTGAAGTTTATTGTTTGACATTTTTTGGCATGGTGGTTATGTTTGTTTTAGTCTTTATTGTATTTATAAGTTTGTCTGC
TGCTTTTTGTAGTAAAGATAAATATGACAAATTTACTTCTATTTTAGTTACCCTAGTACAAGTTAGTTGCCTTGGTGAAG
AAATAGAAATGGATGAGTTGGTATATTTTACAATGCAGATGGAATGTCAGTACAGTGAGGGGGTGGAGAACATGTGGCTG
AAGGAGTGGCCCCTGCCCATTCAGCCACACGATCATCTGAAGACGGTCCACATGAGCGGAGTCTACGGCAACATCGACCT
ACTCAATCTGGCGCTGCACTTTGCTCGATGCGCCATGGTGCTGGAGCGCATGGTGATTGGCCCGATGGTGAAGAAGAACT
ACGTGATGACTCGTGACTCACTGGAGGAGGGCCAACAAATGGCCAGGGAGCACCTTAGGGGAAAGGGGTTTGACGGCATT
CTCACCTTCTTGTGAAGCTCCAAAACGGCTGCTGGCAAGCTTCAGGGTAAATGTTACACAGGTTGAAAGAAAGAACTGCG
TTGCTCAGAATAGCTGGTAGACTGGCCAACATTGCCAAGTGCCAATAGAACAAAAA-GTTGTATGGTTGCGGGCAGAGCT
TGAAGCCAAGCCGTCTCTACTCCAACCTTAATTTTATTTGTAGCATCTTTCTGAAGAGGTGGGAATTGATAACTTTGTGT
ACTGTACAGTGCAGATACAATATTTGTACATATTTGTAGGGTTGCAAGCAGAGCTTGAAGCTCTTTTTTTTCTGTTTTGT
TTTTATTTTCT------------------------------------TTTTTTGTTTAT-GTTTCTTTTTCTTTTCTTCT
TTTTTGTTTTCATTTTTAAAATTTTTTATCTTTTCTATTTTTCAAAAAATGTTCACTTTTTAAAAAAATGTTT-------
------------AATTTTCAAAAATGTGTTCGTGTTTTCAAATTTTGTTCCGGAGTTTCAGAATTTTTTTTGCGTTTTCA
ATTTTTGGTCGGTTGTTTCAAAAAATGTTTCCGATTTCAAGAAAG--AATCACATATTCAAAAAATGTTCACTTTTTAAA
AAT-TTGTTTGTGTTCTAAAATTTGGTTCGGGAGTTTCAAAAAATGTTCGGGTTTTCAAATTTTGTTCAGAATTTCAAAA
AATGTTCCTGCATTCAAATTTTGTTCATAGATCCAAAAAA-TGTTGGTGCTTTTTAATTTTGCTCGGAGTTTCAAAAAAT
ATTCATGTTTTCAAAATTTCAAAAATGTTCCCACTTTTTAATTT-TTTTTGAAAGATTCAAAATTTCATGGTTTAAAAAA
ATGTTCGCAAATTTGAAGAACTATTTGCGTTTTAAA---AAAAGGTCTCTT--AAAAAAAGAGGG-TGGTATAGTGGACC
GAGAGCGCTACAGTACAGTCTTGCTGCAGTAGCCCGGGTTGCTACAGTG-CCGCTGCCTCGCTACAGGCTTTCTTTTAGT
TCGATCGCTCGCTACAGGCGACGATCCTGTGCGCTAGTGAGCCG
>chr7D_489
GTGGCGG-------------------------------------------------------------------------
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---------------CCGGTGCTAGGGCTTGCGGATCGTCGTCGCCGCCGGCCAGGAGAACACGCGGCAGGGCGATTTGG
GTCTCGGGACACCCGAATCGGAGGTAGGCCGAGCCCCTCCCCTCTCTTCTATCCTCCGCTCCGACTCCAGCGCCGTAGTC
CGGCGCGGCCAGAGCACTAGCAGATTCTTCTCTAACTATTTGCTTCGAGCAATCGAATGTTCATTTCTTTCCGAG-----
ATAATATGATCCAATCCACACAGTTCTGAGACCGGATTTGGTTTTGATTTC-TGGTTTCTCAACAGATTGGCAGCTGAAC
TTCCCAAAATCAAAAGAAATTGAGGGAGCGGACTGGTTCGATTGGTGCCCCGATGGCGAAGATCTGCAGCGGCGGTGCTT
CCTCCGGGAGGAGGGTGGGGAAGAGGATGAAGAAGAGGAAGGCTGCGCAGCTTCACGATCTGCCAGATGTGAGTGGGCGC
AGGCAGCAGTGCACACTTTCACTGTTCATTCCTGGTTTCAGATTTTACTTTTAGCAGCCCACTCATTCAGCATAAGTAAA
TTGGTTCCGCAAACTGAATCGTACTTACTCATTAGTACTTATTACTCGTCTGCACGCAGGATATTCTTGTCGACGTGCTG
TCGCATTTGGGGTTCGCGGACGCCGCACGCACGAGCGTACTGTCGAGCAGGTGGAGGCGGCTCTGGCGACTGTGCAACAG
AAGGAACCTGGTCTTCACCAGGGAGACAATGTTCCGGCCCAGAAGCCCGGCGCAAGGCGAAGAAGACTTCGTCAGAAACG
TCGACAGTGTGCTACGCGCCTACGCCAGCTCAGTCCCACCGACCCCAGGGACAAGTTCGTGCTCGAGTTCAGGTTCATTC
AATCCAACGTGGAGTGCTATGTCGACCTATGGGTCGCCTTCTGCGCGGCGTCCACGGCGAAGGACATTGTGTTCGATTTT
AATCCGGGATCATGGGGCACCTACTGGCTCAGCTTCCCACTGAAGCATTTCAGAAATGGCTCTCCTGCCATCAGGTCTCT
ACACCTCATGTCTGTCGACCTGTACCCGCCGGCGGTGCCGCCTGATTTCTGCGGCTTCACAAACCTAAGGGAGCTCAAGC
TCGACTCCGTGCTAGGAGATATCCATTGCCTGCTGCTGCCGGCCTTCTCTGTCCTCGAGTGGCTAAGCGTCACACGCTGC
ACCCTCCACAGCTTCAGTACATCCCAGCCGCCGGGTCGGCTGCGTTACATGTGTGTCCAGTACTGTCACATGCACGAGCT
TGAGGTGCAAGCTCCGAAACTTGCCAAGTTCGAGTTTGCCAGCTTTGAGGTCCATCCGGTATTTGTGTTGATGAGTGCG-
TAGACATACAAGAGGTGACTGTCACGGTGCTAACAGAGGAGGATGTTTTCGACTACGTCTTTGCAAAGCTTCCTGCTGGC
AGTATGTCGTATGCACGGAAGCTCTCGATGCAAATTGCTCTTGATACCCAGGTGTGTTTGTTCAGTGCTGATTGAAGTTG
ATACCCTTGTTGTTGTGTTCTACTTCACTGTTGTTGTGTTCTACTTCACTGTTGTTTGGCTTCTAAACGTTTTC------
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>chr7D_1878
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------------------------------------------------------TGTATCAGGTGCTTCAATTTGCAGGA
TGCCCCAGCAGCTTCATCAATCTGAACCATCTTATATTGACCATGCATGTCCGTGTACGTTATGACTCTACAAGTGGCAT
CCTTCGTTTGGCTTCCCTTTTGGAGTTGGCCCCTGTTTTGGAACAACTGGAACTGCATGTAGGTTTCTCTCATTTCTCTC
TTTCGCATTTACTTGGCCTTTTCTACTGTCATATGCATTTCTCCAACAAGTTAGAAATAGAGATCATATTAGAATTCATT
TTAATTTAATTCAATCCCTGTGTTCAGTTACATGGAGTTTTAGCCATATACACTAGAATTAGGAAAGCTGCTTCCCTCAT
AATGATTCCTTTAACTGGT-GAGTTAGAGTAAGGTAACCCATTCAATTAGTTAAGGGCATGACAGGAAAAGTCATGAATT
TTTTCTTGAATTTGTAAATGCCTTGTATTCTCAAACAGTTAAGAAAGTCTAAAATAGTGCCATCTACTCTTAATGGAAGA
CTCTTTACCTGGACATAATTATTTGAATTATAATATGGCAATTATCTCAACAACAATGAATTAGTGTTTGTCTGTACTAA
CCTGGCTATCTAACCATGCTTCTTGGTTACGGACTGAAAACCATAAATACACCCTTGAG---AACATGGCAATGGGCCAA
GCTCCTTCCAAGCCGACACTGTGCATTTGTCTTGCACAGGTGCACCGTGTCTATGACTACA--------TAGCCACATCG
AGTGGAGTTTATTGTTTGACATTTTTTGGCATGGTGGTTATGTTTGTTTTAGTCTTTATTGTATTTACAAGTTGGTCTGC
TGCTTTTTGTAGTAAAGATAAAGATGACAAATTTACTTCTATTTTAGTTACCCTAGTTCAAGTTAGTTGCCTTGGTGAAG
AAATAGAAATGAATGAGTTGGTATATTTTACAATGCAGATGGAATGTCAGTACAGTGAGGGGGTGGAGAACATGTGGCTG
AAGGAGTGGCCCCTGCCCATTCAGCCACACGATCATCTGAAGACGGTCCACATGAGCGGAGTCTACGGCAACATCGACCT
ACTCAATCTGGCCCTGCACTTTGCTCGATGCGCCATTGTGCTGGAGCTCATGGTGATCGGCCCGATGGTGAAGAAGAACT
ACGTGATGACTCGTGGCTCGCTGAAGGAGGGCCGGCGAATGGCCAGGGAGCACCTTAGGGGAAAGGGGTTTGACGACATC
CTCACCATCTTGTGAAGCTCCAAAATGGCTGCTTGCAAGCTTCAAGTAAATA-TTACACAGGTTGAAAGAAAGAACTGCA
TTGCTCAGAATCACTAGTAGACTGGCCAACATTGCCAAGTGCCAACAGAAAAAAAAAGTTGTAGGGATGCACGCAGACCT
TGAAGCCAACCCCTCTCTACTCCAACCTTAATTTTATTTGTAGCACCTTTCTGAAGAGGTGGGAATTGATAACTTTGTGT
AGTGTACAGTACAGATAGAAT-----------------------------------------------------------
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>chr2A_3403
CTTTTTC-------------------------------------------------------------------------
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------------------------------------------------------------------TTTTTCTGTTTCGT
TTTTCTTTCCT------------------------------------TTTTTTGTTTATTGTTTATTTTTCTCTCTTTCT
TTTTTGTTTCC---------------------------TTTTTAAAAAATGTTCTCTTTTTCAAAAAATGTACATATTTT
CAAAAAATGTTCAATTTACAAAAATGTGTTCGTGTTTTCAAATTTTGTTTCGGAGTTTCAGAAAATTGTTTGTGTTTTCA
ATTTTTGGTCGGTTGTTTCAAAAAATGTTTCCAATTTCAAGAAAAAAAATCACATATTCAAAAAATGTTCACTTTT-AAA
AAA-TTGTTCGTGTTTTGAAGTTTTGTTCGGGAGTA-CAAAAAATGTTCGTTTTTTCAAAAAAAA--CAGAATTTC-AAA
AATGTCCCCGTATTCATATTTTGTTCATAGATCCAAAAAA-TGTTCGTTCTTTTGAATTGTGTTCGGAGTTTAAAAAAAT
GTTCATGTTTCCATAATTTCAAAAATGTTCCCATTTT---AAAAATTGTTGAAAGATTCAAATTTCAA-GGTTTCCAAAA
ATGTTTGCAAATTCGAAGAACTGTTTGCGTTTTTAAAAAAAAATAGTCACTTAAAAAAAAGAGTG-TGGTACAGTGGACT
GAGAGCGCTACAGTACCGTCTTGCTGCAGTAGCCCGGGTTTCTACAGTGCCCGCTGCCTCGCTACAGGCTTTCTTTTAGT
T-------------------------------------------
>chr3A_3421
G-------------------------------------------------------------------------------
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-------------------------------------------------------------------------------T
TATTTATTTTCATTTCTTTTTCATTTTCTGTTTCATTTTTTCTTTTATTTTTTGATTATTGTTTCTTTTT----------
-----TTTTCC---------------------------TTTTTCAAAAATGTTCTCTTTTTCAAAAAATGTTT-------
------------GATTTTCAAAATTTTGTTCGTGTTTTCAAATTTTGTTCCAGAGTTTCAAAAAATGGTTTGTGTTTTCA
ATTTTCGGTCGGTTGTTTAAAAAAAT---TCCGATTTCAAGAAAAAT--TCACATATTTAAAAAATGTTCACTTTT-AAA
AAAATTGTTCTTGTTTTGAAATTTTGTTCGGGAGTTTCAAAAAATGTTCGGGTTTTCAAATTTTGTTCAGAATTTCAAAA
AATGTTCCTGTATTCAAATTTTGTTCATAGATCCAAAAAAATGTTCGTGCTTTTCAATGTTTTCCGAGTTTCAA--AAAT
GTTCATGTTTTCAAAATTTAGAAAAAATTCCCATTTTTAAAAAAATTGTTGAAAGATTCAAAATTTCATGGCTTAAAAAA
ATGTTCACAAATTTGAAGAACTGTTTGCGTTTTCAA---AAAATGATCACTTACAAAAAAGAGGG-TGGTACAGTAGACT
GAGAGCGCTACAGTTCCGTCTTGCTGCAGTAGCCCGGGTTGCTACAGTGTCCGCTGCCTCGCTACAGGCTTTCGTTTAGT
TCGATCG-------------------------------------
>chr2A_3422
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-------------------------------------------------------------------------------T
TTTTATTTTTCATTTTTTTTCTGTTTCC--------TTTTTCTTTTCTTTTTTGTTTGTTGTTTATTTTTTTTC------
-TTTTTTTTCC---------------------------TTTTTC-AAAACGTTCTCTTTTTCAAAAAATGTTA-------
------------GATTTTCAAAAGTTTGTTCGTGTTTTCAAATTTTGTTTCAGAGTTTCAGAAAATTGTTTGTGTTTTCA
ATTTTTCGTTGGTTGTTTCAAAAAATATTTCCGTTTTCAAGAAAAAT--TCACATATTCAAAAAATGTTCACTTTTTTAA
AAAAAAA-TCGTGTTTTGAAATTTTGTTCGGGAGTTTCAAAAAATGTTCGGCTTTTCAAATTTTGTTTGGAATTTCAAAA
AATGTTTCTGTATTCAAATTTTGTTCATAGATCCAAAAAA-TGTTCGTGCTTTTGAATTTTGTCCGGACTTTCAAGAAAT
GTTCATGTTTGCAAAATTTCAAAAATGTTCCCATTTCT-AAAAAATTGTTGAATGATTTAAAATTTCATTGTTTCAAAAA
ATGTTCTCAAATTTGAAGAACTGTTTGTGTTTTCAA---AAAATGGTCACTT---AAAAAAAAGGATGGTACAGTAGACC
GAGAGCGCTACAGTACCGTCTTGCTGCAGTATCGCGGGTTGCTA------------------------------------
--------------------------------------------
>chr2D_3523
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---------------------------------------------------------TTTTCAAAAAACGTTT-------
------------GATTTTCAAAATTTTGTTCGTGTTTTCAAATTTTGTTCCGGATTTTCAGAAAATTGTTTGTGTTTTCA
ATTTTTGGTCGGTTGTTTCAAAAAATGTTTCCAATTTCAAGAAAAAT--TCACATATTCAAAAAATGTTCAGTTTTTTAA
AAAAATGTTTGCGTTTTGAAATTTTGTTCGGGAGTTTCAAAAAATGTTTGGGTTTTC-AATTTTGTTTGGAATTTCAAAA
AATGTTCCCGTATTCAAATTTTGTTCATAGATCCAAAAAA-TCTTCGTTATTTTGAATT-TGTTCGGAGTTTCAAAAAAT
GTTCATGTTTTCATAATTTCAAAAATGATCCCATTTTA-TAAAAAGTATTGAAAGATTCAAAATTTCATGGTTTCAAAAA
ATGTTCGCAAATTTGAAGAACTGTTTGCGTTTTCAA---AAAAGGGTCACTT---AAAAAAAAGG-TGGTACAGTGGACC
GAGAGCGCTACAGTACCGTCTTGCTGCAGTAGCTCGGGTTTCTACAGTGCCCGCTGCCTCGCTACAGGCTTTCTTTTAGT
TCGATCGCTCGCTACAGGCGACGATCTTGTGCGCTAGTGGGCCG
>SNPs
-S-S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSS----------------------------------------------SSS--S--SS-S-S-----
----SS---SS------------------------------------------SSSS--------SS-------------
S------------------------SS--------S----------S-----S-----SSSSSS---SS-S-SS-SSSSS
-----S-----------S--------S--------------S--------SS--S--------S------S---------
--S-------------------S-----S------S---SS-SSSSS-S-S-----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------S--------S-S------S---------------S--S--------SSSSSSSS-----------------
--------------------------S-----------S-----------------S-S-------S-SSSS---S----
----SS---------------S----------------------------------------------------------
-----------------------------------------------------------S--------------------
-------S---------S---------S------------------------S---------------------------
--------S------------------S-------------------------------S--------------------
--------------------------------S----------------S-------------------S----------
--------------------------------------------------------------------S-----------
-------------------------------S------------------------------------S-----------
------------------S-----S-----------------------------------S------S-SSSSSSSSSSS
---------------------------------------------------------S----------------------
S------------------------------S-------S----------------------------------------
------------------------------------------------------------S-------S-----SSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------------------
--------------------S-----S--------------------------------------------S--------
-------------------------------------S------------------------------------------
---S-----------------------------------------S------------------S------S--------
-------------S---------SS-----S---------S-----S---------------------------------
-S----------S-SSS-SS--------S--------------------------S-S----S----------S----S-
---SS---------------S-S----------S-------------------------S--------------------
---------------------------------------------------------------------S----------
------------------------------S---------S------------------SSS------------------
-----------------S-------------------S----------S---S------SSSSSSSSSS-----------
----S--------------------------------------------------------------S-----S------
----------------------S----------------------------------S----------------------
-----------S--------------------------------------------------------------------
--------------------------------------------------------------------------------
------------S-----------------------S----------S---------S----------------------
---------------S---S---S---------SS-S--------------------------------------S---S
------S------------------S-------S----------S-SS--SSS--------------------------S
-----------SS--S-----------------------------S----S------------S--S---SS-----S--
---------S--S--------------------------------S----------------------------------
-S--------S------S---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------S--
--------------------------------------------------------------------------SS----
---------S-SSSSSSSSSSSSSSSSSSSSSSSSSSS----S-----------S------S------------------
---------------------------------------------------------------SS--S----S-------
--------------------------------------------S-----------------------------------
--S------------S-S------S-------------------------------------------------------
----------S----------------------------------S--------S-------S-----------------
S--------------------------------S----S--SSS---S--------------------------------
----------------------S----------S-----------SSSSS---------------------S--------
----------------S---------------------------------------------------------------
--------------------------S------------S----
>forward_114
--------------------------------------------------------------------------------
--------------GAAGAATAGCCTCCCTCCGC----------------------------------------------
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>reverse_1570
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-------------------------------------------------CGCGGCTTCACAAACCTAAG-----------
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>forward_117
--------------------------------------------------------------------------------
-----------------GAATAGCCTCCCTCCGCTTC-------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------
>reverse_2232
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------CAGTGGCAT
CCTTCGTTTGG---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------
>forward_335
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------CCGAC
ATGGCTTCTATCCCC-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------
>reverse_2278
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------CTGGAACAACTGGAACTGCA-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------
>forward_1833
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------ATCCGGTGTTTGTGCTCGAT-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------
>reverse_3453
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------GCTGGTAGACTGGCCAACAT------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------
