>input_sequence_37591
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---------------------------------------------------------------------ATGGTGCCCAG
GGACATGGTGAATGCCCCCGCCGAGAGGCTGCACGACCAAGGGTGAGTTCTGGGGCCTGTAAATTTTT---TTTTCAGTC
TCGGGGAGAGGAACAAGAAAATGAACTGGCCCGCAGATGGAATTCCAGAGCAAAAGGAATTCTAGAGCGATTTTTACCCT
GTAGAATTGGTTCGAGCACCATCT-TTTTCAATAAAGTCTTGGCGAGTG-ATATGGAAATACTGAAACCCACATGACTTC
ATATTCAACCTTGAAGTAGAGGAACCAAGCACTGGATTTTTGCCCTGAACAATCATTGTTTCTGAGATTATAAACTGCTT
GCAAGTTGTAGCATCCATTCCATTGGTAATCACGTGGCCGCGGAAGAAGTAATTC-GGTGTGGCTTCTTGTGTTTCTGAT
TTCGTGAGCTACAAATTTGATGT-GTGCAATAGCGCTCACCGTGGTTGGTGCCTTATGATCCTGAAAACTCCTACCACTT
CATGGTGAACCACCGCAAAGATAAAACTGCCCCGTACAATTCTGATACCACCTGACT-GTGTTCTTCCACTGATGTTTGA
ATATTGTGCAGGTCTGTCGTGAACAGGAAGTGTGAGA---AG---GTGCCAAAGAAAATCCATAAGTCGGAGAGGGAGAA
ACGGAAGCGAGGCACGCAGAATGACCTCTTTAATGAGCTGGGAGCCATGCTAGGTATGTGTATATA-TATCTTACTAGTA
CAAAGCAGCAAGCTGCAACAACATGATTTCTGGTGCCACTACCGCGTTTGGAAGTTTCTTTATATGAGCTTGTGGGGTGG
TTATCTCTATGTAAAACTTAGCATGCTGGTAGAGCTCTTGGGTCATCCAAATGCTAGGCTGATTTTATTAGGATAATAAA
GCAAGATCACAGATTCAACATCTAGCAAATAGCTTGTATTCACACAATAGCCTGAGTTTTGACCTTTCACTATGCAAGGC
AAATTTACATCTGAGTGCATATATGTCACGACTTTCTCCCCATGTGTCTGATTAGTTTGTATCAAATCTACAGCCCCATC
CTTTTGGATATGCATTAATACTTTCTAAAACAATGCAAACATCT-CCTTTTCAGAACCAGACAGGCAGAACAACGGGAAG
GCATGTGTATTGGGTGACACTACACGGATACTGAAGGATTTAGTTTCACAAGTGGAATCTCTTCGGAAGGAGAATAGCAC
ACTGAAGAATGAATCTCATTATGTAAGACCTTTTGAATAGAGCAACTCTATTCAGCAATTTGATGATTTGTGTCTATTAT
ATCATGGATATGAAAATGTTAGTACATATTCTTGTGCTGAGATTCCTTTAGAATAGGAAACCAATCCCATCCTTTAACAT
TTATGGCTTCATGCCCAGTAACATTATTTATGAACAAATAAGAACTACTCCCTCTGTTCCTAAATATAAGCCTTTTTAGA
GATTCCAACACGGACTATGTATACGGAGCAAAATGAGTGAATCTACACTCTAAAATACGTCTATATATATACGTACATAG
TCTGTATTGAAATTCTAAAAAGGCTTATATTTAGAAATGGAGGGAGTAATTTACACTATTATCACTGCTCAGATAATACA
CTTCCTCAGCACTTCATCACTGATGCATTTCCTACTTTCCTCATGATATGAAACAGGTTGTGTTGGAGAGAAATGAACTG
CGTGATGACAACAGCATGCTTCGCAATGAAATCCTGGAGCTTCAGAACAAGCTTAGAATGCGTCTGCAGAGCAACCCTAT
TTGGAGCCAGGATACTACTACAAGATCAGCCGTTGCAGTACCTTATCCCACAAGCGGAGTGTTCCCAGTACAGCATTCGC
CACATTCACCAGTCATCACCTCGACAGCACTTTCTCTGCATCCCGTAATCACTGAGCAATGCTATGCTGCCCCACCACGA
GAGCTGCAGCTCTTCCCGGAAGCTTCATCTGCATCCACTGAAGACAGCGAACTGTCACAAGACCAGGGGATTTCCAATAG
TGTGACGCCGCCCCAGGCACGGTACCCAACACCAGCGGTGATGTCACCAGTAAACGAATTCCCAATCCTTCCAAGGATGG
GAGAGGAGCAACAATATAGTAGTGGCACTAGTGAGGA---------------GGTTTAA---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------
>chr2A_1_TraesCS2A01G157800
AAGGGAGAACATGGAGTTTCTTAGCTCGGGTTCAGTA-----------------------AAAAAAACATTAAAAAATAT
TTCAAGTGCTTGCAAAGCTTTATCATGGAATTACATCCGCGGAAGTCATGGCAAAAAATAAAATAATTGATGCTCCGAAG
ATGCTATTTTCAAAAGCATTTTGAAGCACTGATTTTATCTTTTTTGTCGGGACTTCCACAAATGTGATATGCCGATGAAA
ATTTGCAAGCACTCGAAACATTTATTGATGTTTGCCCACAAAAAAAAAATCA----------------------------
-----GAATTGTATTTTTTTGATTTTACTGTTCATGCCAAGAGCATTTGAGCGTAGATTAGGACTTTCGTAGTA---ATT
CCTTTCTGTTTTCTTTCTTTA-ACCTTCGGTATATAAAATTCGCACGGGATCACGAGGCCGGATGCCACCGGGCACGCGC
GAGCACGTGGCGGGATCCAGGTCGGACCGGATAAACTAGGCGCGGGGCCAGCGGCGCCACGCCGCCCACCCGCCGCTGGG
TCCGGAGGCTCGTGCCCACCACGGCACCGCGCCCTCGCCCTCGCCCGCCACGGCGCCAAGGTGCGAAGTCCACGCAGCAG
CACGCGCGGCCGAACGGTGCCGTCCACGCGCCCCGCCCCATCGCCATCCTCCTTTCCCCGCCCCACGGTTCGGCTACGCT
ACACGACGTCCCCAATCACACGGCGGGTCGCTTTCTCCCTCCGCCCCCGGCTTCTCCCCCCCGTTGGACGATCCGCCCGT
CGTCCTCCCCCTACTTAGCTTCCCCTCCCCGTCTCTCCCCCTCTTCCTCCC--CCTTTCACCTCGAGCGATCACGGAGAG
GAGAACCACAGGTAGACGAGCCCCTCGCGCCCCCAAAT-------------------CCTCGG--CCCTTCCCCGCTTCA
ATTGGAGGTAATCGTCGTGATTGATCGTT--------------------TTGGCGCTGGGTCGGGCCGT-----GTGGAG
GAACTGACGGAGCTCGTGCTTGGTTTTACAGTCGCAGGGGAGG-TACCGGATCGAGCTTCCCGGTCGGCATGGTGCCCAG
GGACATGGTGAATGCCCCCGCCGAGAGGCTGCACGACCAAGGGTGAGTTCTGGGGCCTGTAAATTTTT---TTTTCAGTC
TCGGGGAGAGGAACAAGAAAATGAACTGGCCCGCAGATGGAATTCCAGAGCAAAAGGAATTCTAGAGCGATTTTTACCCT
GTAGAATTGGTTCGAGCACCATCT-TTTTCAATAAAGTCTTGGCGAGTG-ATATGGAAATACTGAAACCCACATGACTTC
ATATTCAACCTTGAAGTAGAGGAACCAAGCACTGGATTTTTGCCCTGAACAATCATTGTTTCTGAGATTATAAACTGCTT
GCAAGTTGTAGCATCCATTCCATTGGTAATCACGTGGCCGCGGAAGAAGTAATTC-GGTGTGGCTTCTTGTGTTTCTGAT
TTCGTGAGCTACAAATTTGATGT-GTGCAATAGCGCTCACCGTGGTTGGTGCCTTATGATCCTGAAAACTCCTACCACTT
CATGGTGAACCACCGCAAAGATAAAACTGCCCCGTACAATTCTGATACCACCTGACT-GTGTTCTTCCACTGATGTTTGA
ATATTGTGCAGGTCTGTCGTGAACAGGAAGTGTGAGA---AG---GTGCCAAAGAAAATCCATAAGTCGGAGAGGGAGAA
ACGGAAGCGAGGCACGCAGAATGACCTCTTTAATGAGCTGGGAGCCATGCTAGGTATGTGTATATA-TATCTTACTAGTA
CAAAGCAGCAAGCTGCAACAACATGATTTCTGGTGCCACTACCGCGTTTGGAAGTTTCTTTATATGAGCTTGTGGGGTGG
TTATCTCTATGTAAAACTTAGCATGCTGGTAGAGCTCTTGGGTCATCCAAATGCTAGGCTGATTTTATTAGGATAATAAA
GCAAGATCACAGATTCAACATCTAGCAAATAGCTTGTATTCACACAATAGCCTGAGTTTTGACCTTTCACTATGCAAGGC
AAATTTACATCTGAGTGCATATATGTCACGACTTTCTCCCCATGTGTCTGATTAGTTTGTATCAAATCTACAGCCCCATC
CTTTTGGATATGCATTAATACTTTCTAAAACAATGCAAACATCT-CCTTTTCAGAACCAGACAGGCAGAACAACGGGAAG
GCATGTGTATTGGGTGACACTACACGGATACTGAAGGATTTAGTTTCACAAGTGGAATCTCTTCGGAAGGAGAATAGCAC
ACTGAAGAATGAATCTCATTATGTAAGACCTTTTGAATAGAGCAACTCTATTCAGCAATTTGATGATTTGTGTCTATTAT
ATCATGGATATGAAAATGTTAGTACATATTCTTGTGCTGAGATTCCTTTAGAATAGGAAACCAATCCCATCCTTTAACAT
TTATGGCTTCATGCCCAGTAACATTATTTATGAACAAATAAGAACTACTCCCTCTGTTCCTAAATATAAGCCTTTTTAGA
GATTCCAACACGGACTATGTATACGGAGCAAAATGAGTGAATCTACACTCTAAAATACGTCTATATATATACGTACATAG
TCTGTATTGAAATTCTAAAAAGGCTTATATTTAGAAATGGAGGGAGTAATTTACACTATTATCACTGCTCAGATAATACA
CTTCCTCAGCACTTCATCACTGATGCATTTCCTACTTTCCTCATGATATGAAACAGGTTGTGTTGGAGAGAAATGAACTG
CGTGATGACAACAGCATGCTTCGCAATGAAATCCTGGAGCTTCAGAACAAGCTTAGAATGCGTCTGCAGAGCAACCCTAT
TTGGAGCCAGGATACTACTACAAGATCAGCCGTTGCAGTACCTTATCCCACAAGCGGAGTGTTCCCAGTACAGCATTCGC
CACATTCACCAGTCATCACCTCGACAGCACTTTCTCTGCATCCCGTAATCACTGAGCAATGCTATGCTGCCCCACCACGA
GAGCTGCAGCTCTTCCCGGAAGCTTCATCTGCATCCACTGAAGACAGCGAACTGTCACAAGACCAGGGGATTTCCAATAG
TGTGACGCCGCCCCAGGCACGGTACCCAACACCAGCGGTGATGTCACCAGTAAACGAATTCCCAATCCTTCCAAGGATGG
GAGAGGAGCAACAATATAGTAGTGGCACTAGTGAGGA---------------GGTTTAAGTACATAACACAATTTGCTTC
ACCGTTTGTGAAGTTTCTGTAGTGTGAGTGGAGTGTGTTTCTGTGCAACAGATACATACGCAGATGTGCATGTAAACTCC
AATCTGTCTCCGAATCTTTATCTTAACGGGTTAAATAGGTGATAATAAAAACTGCTTTACCCCTGAATCTTGTATCTGAT
AACTGCACATGTATGGATTGCTCT------TCAGCAAAAATCAGTCGAGATGATGATACCGTTGTTAGTCACCTGTGCAT
AAGTATATTTTCGAATCGACAGTCCGACCTTGTGATCAATTGGTGGTCGCTGCTTCAGTTCAGCAAGGTTAGATATCTTA
GGAAGACACATCAATGGAGCTGCAGCCCGCTTCTTTCCTGTCCGTGACCATTTTCTGCCCTTGTGAATCCCTGATCTGTG
CTATTTCATCCCAACGGCCTTCCATTGCGTATGCGTTCGACAGCAGAATGGTATCAGACGGATGGTAATTGCCCATGGCG
TCCAACCGTGCCTGCACCATCCTCCCCAGCTCGACATTGCCATGAACTCTGCAGGCTGCAAGTAAAGTTCTCCATCCCAT
AGCGTCGCCATGGGACGACAAACTTCTTATAAGCTCATACGCTTCATCCAATCGCCCCGCCTTTCCGAGGAGATCGATGA
TGCAGCCATAGTGTTCGGTGTGGGGAGACATACCATATTTCCGGACCATGCTCTCGAGGTGCTTCTTCCCTTCAAACACT
AACCCGCCATGGCTACAAGCATTGAGCACCGCAAGAAAGGTAACCTCGTTAGGAGTGACACCGACTTGCTGCATCGAGTG
AAACAGGGATATCGCGGCATCTGACTGCCCATTAACCCCCAACCCCATGATCATCGCAGTCCATGCCATCACATCCCTGT
CGCGCATTGCATAAAAGACTGCAATCGCCTCCTTGGGGTACCCACACTTGAAGTACATATCCACGAGCGATGTTCCTAGT
GCAGTGTCAAGCTCAAGGCCAAGCT
>chr2B_1
AAGGGAGAACATGGAGTTTCTTAGCTCGGGTTCAAATGAATCCGGATGAAAAGTAAAAATAAATAAACATCAAAAAATAT
TTTGAGTGCTTGCAAAGCTTTATCACGGAATTACATCCGTGAAAGTCATGGCAAAAAAATAAATAATTGATGCTCCGAAG
ATGCTACTTTTAAAAGCATTTTGAAGCATTGATTTTATCTTTTTTGTCAGGACTTCCACAAATGTGATATGGCGATGAAA
ATTTGCAAGCACTCGAAACATGATCCCCTGGAGCACGTTCATGAAAAATTACATCCGGTGCCATGAAAAAAGTTCAGTAT
TGTTTGATTTTTACTTTTGCGAGTTTACTGTTCTGGTCATGCTC----GAGCGCAGATTAGGACTTCCGTAGTACTAATT
CCTTTCTAGAAGTATTTTCTTTACCTTCCGTATATAAAATTCGCAATGGATCACGCGGCCGGACGCCACCAGGCACGCGC
GAGCCCGTGGAGGGATCCAGGTCGGACTGGATAAACTAGGCGCTGGGCCAGCGACGCCACG-CGCCCACCCGCCGCTGGG
TCCAGAGGCTCGTGCCCACCATGGCA------------CCGCGCCCGCCACGGCGCCGAGGTGGGAAGTCCACGCAGCAG
CACGCGCGGCCGAACGGTGCCGCCCACGCGCCCCGCCCCATCGCCATCCCCCTCTCCCCGCCCCACGGTTCGGCTACGCT
ACACGACGTCCCCAATCACACGGCGGGTCGCTTTCTCCCTCCGCCCCCGGCTTCT---CCCCGTTGGACGATCCGTCCGT
CGTCCTCCCCCTACTTAGCTTCCCCCTCCCGTCTCTCCCCCCTTCCCTCCCACCCCTTTACCTCGTGCGATCACTGAGA-
----ACCATAGGTAGAAGAAACCCTCGAAGAGCAGCTCTTAGGCTCGCACTCTCGAATCCTAGCCCCCTTGTCCGCTTCA
ATTGGAGGTAATCCTCCTGATTTAT-TTGTTTCTTCATGTTCTTTCGTCTTGTTGCTGGGCGGGCCGGGGAGGCG--GAG
GAACTGATGGAC------CTTGGTTTTAGTCGCAG-GGTGAGGGTACCGGGTCGAGCTTCTGGGCCAGCATGGTGCCCAG
GGACATGGTGAATGCCCCCGCCGAAAGGCTGCACGTCCAAGGGTGAGTTCTGGGGCCTGCAATTGATTTATTTTTCAGTC
TTGGGAAGAGGAGCAAGAAAATGAACTGGCCCGCAGATTGAATTCCGC-----------------AGCGATTTTCACCCT
GTAGAATTAGTTCGAGCATGATCTTTTTTCAATAAAATCATCGCGGGTGTATATGGAAATACTGAAACCCATATGACTTC
GTACTCAGCCTTGAAGTAAAGGAACCAACCAGAGTTTTTTAGCCCTAAACAACCATTGTTTCTGAAATTTTAAACTGCTT
GCAAGTCGTAGCATCCATTCCATCGGTAATCTTGTCGCTGTGGAAGAGGTAATTC-GGTGTGGCTTCTCGTC-TTCTGAT
TTCATGCGCTACAAATTTAAATTCGTGCAATAGTGTTCACCC----TGGTGTCTTATGATCCTGGGAACTCCTGCC----
-----------------AAGATAAAACTGTCTCATACAATTCTGATATCATCTGACT-GA-TTCTTACACTGATGTTTGA
ACATTGTGCAGGTCTGTCGTGAACAAGAAGTGTGAGACGAAG---GTGCCAAATAAAATCCACAAGTCGGAGAGGGAGAA
GCGGAAGCGAGGCACGCAGAATGACCTCTTTAATGAGCTGGGAGCCATGCTAGGTTTGTGTATATCTTATCTTACTAGTA
CAAAGCAGCAAGCTGCAACAACATGATTTCTGGTGCCATTACCGCATTTGGAAGTTCCGTTATATGAGCTTGCCGAGTGG
TTATCTCTATGTAAAATTTAGCATGCTGGTAGAGCTATTGGGTCATCGAAATGCTAGGCTGGTTTTATTAGGATAATAAA
GCAAGATCACAGATTCAACATCTAGCAAATAGCTTGTATTCACACAATAGCCTGAGTTTTGACCTTTCACTATGCAAGGC
AAATTTACAT-TGAGTGCATATATGTCATGACCTTCTCCCCATGTGTCTGATTAGTTTGTATCAAATCTACAGCCCCATC
CTTTTGGATATGCATTTATACTTTCTAAATCAATGCAAACATCT-CCTTTTCAGAACCAGACAGGCAGAACAACGGGAAG
GCATGTGTATTGGGTGACACTACACGGATACTGAAGGATTTAGTTTCACAAGTGGAATCTCTTCGGAAGGAGAATAGCAC
ACTGAAGAATGAATCTCACTATGTAAGACCTTTTGAATAGAGCAACTCTATTCAGTAATTTGATGATTTGTGTCTATTAT
ATCATGGATATGAAAATGT-AGTACATATTCTTGTGCCGAGATTCCTTTAGAATAGGAAACCAATCCCATCCGTTAACAT
TTATGGCTTCATGCCAAGTA----TATTTATGAACAAATAGGAACTATTCCAAGTAATTTATGCCA--------------
--------------------------------------------------------------------------------
--------------------------------------------AGTAATTTACACTATTATCACTGCCCAGATAATACA
CTTCCCCAGCACTTCATCACTGATGCATTTCCTACTTTCCTCATGATATGAAACAGGTTGTGTTGGAGAGAAATGAACTG
CGTGATGACAACAGCATGCTTCGCAATGAAATCCAGGAGCTTCAGAACAAGCTGAGAATGCGTCTGCAAAGCAACCCTAT
TTGGAGCCAGGATACTACTACAAGATCAGCCGTTGCAGTACCTTATCCCACAAGCGGAGTGTTCCCAGTACAGCATTCAC
CACATTCACCAGTCATCACCTCGACGGCACTTTCTCTGCAACCTGTAATCACTGAGCAATGCTATGCTGCCCCACTACGA
GAGCTGCAGCTCTTCCCAGAAGTTTCACCTACATCCACTGAAGATAGCGAACTGTCACAAGACCAGTGGATTTCCAATAG
TGTAACAAGGCCCCAGGCACGGTACCCAACACCAGCGGCGATGTCGCCAGTAAATGAGTTCCCAATCCTTCCAAGGATGG
GAGAGGAGCAACAATATAGTAGTGGCACTAGTGAGGAAGACGGTCCACACAGGGTTTAAGTACATAACACAATTTGCTTC
ACCGTTTGAGAAGTTTCTGTAGTGTGAGTGGAGTGTGTTTCTCTGCAACAGATACATATGCAGACGTGCATGTAAACTCC
AATCTGTCTCCGAATCTTGATCTTAACTGGTTAAATAGGTGATAATAAAAAATGCTTTACACCTGAATCTTGTATCTGAT
AACTGCACATGTATGGATAATGGATTGCTCTCAGCAAAAATCAGTATAGATGATGATACTGCTGTTAGTCACCTGGGCAC
AAGTACATTTTCGCATCGACAGTCCAACCTTGCGATCAGTTGGTGGTCGTTGCTTCAGTTCAGCAAGGTTAGATA--TTA
GGAAGACACTTCAATGGAGCTGCAGCCCGCTTCTTTCCTGTCCATGTCCATTTTCTGCCCTTGTGAATCCCTGACCTGTG
CTATTTCATCCCAACGGCCTTCCAATGCATATGCGTTCGACAGAAGAATGGTATCTGATGGATGGTAATTGCCCATGGCA
TCCAATCGTGCCTGCACCGTCCTCCCCAGCTCGACATTGCCATGAACTCTGCAGGCTGCAAGTAAAGTTCTCCACCCCAC
AGCATCGCCATGGGACGACAAACTTCTTATAAGCTCATACGCTTCATCCAATCGCCCTGCCTTTCCGAGGAGATCGATGA
TGCAGCCATAGTGTTCGGTGTGAGGAGATAGGCCATATTTCCGGACCATGCACTCGAAGTGCCTCTTCCCTTCAAACACT
AACCCGCCATGGCTACAAGCATTCAGCACCGCAAGAAACGTAACCTCGTTAGGAGTGACACTGTCTTGTTGCATTGAGCG
GAACAAGGATATCGCGGCATCAGACTGTCCATTAACCCCCAACCCCATGATCATCGCAGTCCATGCCATCACATCCCTGT
CGCACATTGCGTAAAAGACTGCAATTGCCTCCTTTGGGTACCCACACTTGAAGTACATATCCACGAGCGATGTTCCTAGT
GCAGTGTCAAGCTCAAGACCAAGCT
>chr2D_378
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------AATTCGCAGGGGATCACGAGGCCGGATGCCACCGGGCACGCGC
GAGCCCGTGGAGGGATCCAGGTCGGACTGGATAAACTAGGCGCTGGGCCAGCGGCGCCACGCCGCCCACCCGCCGCTGGG
TCCAGAGGCTCGTGCCCACCACGGCACCACGC-----------CCCGCCACGGCGCCGAGGTGGGAAGTCCACGCAGCAG
CACGCGCGGCCGAACGGTGCCGCCCACGCGCCCCGCCCCATCGCCATCCCCCTCTCCCCGCCCCACGGTTCGGCTACGCT
ACACGACGTCCCCAATCACACGGCGGGTCGCTTTCTCCCTCCGCCCCCGGCTTCTCCCCCCCCGTTGGACTC---CCCGT
CATCCTCCCCCTACTTAGCTTCCCATCCCCGTCTCTCCCTCCCTCC------CCCCTTCCCCTCGAGCGATCACGGAGAG
GAGAACCACAGGTAGACCAAACCCTCGAAGAGCAGCTCTTAGGCTCGCGCTCCATAGCCTCAG--CCCTTCCCCGCTTCA
ATTGGAGGTAATCGTCGTGGTTTATTTTCTCTCTCGATGTTCTTTGGAATTTGTGCTGGGTCGGGGCGT-----G--GAG
GGACTGATGGAC------CTTGGTTTTACTCGCAG-GGTGAGG-TACCGGATCGAGCTTCTCGGTCAGCATGGTGCCCAG
GGACATGGTGAATGCCCCCGCCGAGAGGCTGCACGTCCAGGGGTGAGCTCTGGGGCCTGTGATTTATTTATTTTTCAGTC
TTGGGAAGACGAACAAGAAAATGAACTGGCCTGCAGATGGAATTCCAGAGCAAAAGGAATTCTAGAGCGATTTTTACCCT
GTAGAATTGGTTCGAGCACCATCT-TTTTCAATAGAGTCTTGGCGAGTG-ATATGGAAATACTGAAACCCACATGACTTC
ATATTCAACCTTGAAGTAGAGGAACCAAGCACTGGATTTTTGCCCTGAACAATCATTGTTTCTGAAATTATAAACTGCTT
GCAAGTTGTAGCATCCATTCCATTGGTAATCTTGTGGTTGTGGAAGAGGTAACTCTGGCGTGGCTTCTCGTG-TTCTGAT
TTCGTGCGCTACAAATTTAGTGT-GTGCAATAGTGTTCACCA----TGGTGTCTTATGATCCTGGAAACTCGTACCACTT
CATGATGAACCACCGCAAAGATAAAACTCTCCCGTACAATTCTGGCATCACCTGACTGGA-TTCTTCCGCTGATGCTTGA
ACATTGTGCAGGTCTGTCGTGAACAGGAAGTGCGAGA---AGAAGGTGCCAAAGAAAATCCATAAGTCGGAGAGGGAGAA
ACGGAAGCGAGGCACACAGAATGACCTCTTTAATGAGTTGGGAGCCATGCTAGGTATGTGTATATA-TATCTTACTAGTA
CAAAGCAGCAAGCTGCAACAACATGATTTCTGGTGCCACTACCGCGTTAGGAAGTTTCTTTATATGAGCTTGTGGGGTGG
TTATCTCTATGTAAAACTTAGCATGCTGGTAGAGCTCTTGGGTCATCCAAATGCTAGGCTGATTTTATTAGGATAATAAA
GCAAGATCACAGATTCAACATCTAGCAAATAGCTTGTATTCACACAATAGCCTGAGTTTTGACCTTTCACTATGCAAGGC
AAATTTACAT-CGATTGCATATATGTTATGACCTTATCCCCA-GTGTCTGATTAGTTTGTATCAAATCTACAGTCCCATC
GTTTTGGATATGCATTTATACTTTCTAAAACAATGCAAACATCTCCCTTTTCAGAACCAGACAGGCAGAACAACGGGAAG
GCATGTGTATTGGGTGACACTACACGGATACTGAAGGATTTAGTTTCACAAGTGGAATCTCTTCGGAAGGAGAATAGCAC
ACTGAAGAATGAATCTCACTATGTAAGACCTTTTGAGTAGAGCAACTCTATTCAGCAATTTGATGATCTGTGTCTATTAT
ATCATGGATATGAAAATGTTAGTACATATTCTTGTGCCGAGATTCCTTTAGAATAGGAAACCAATCCCATCCGTTAACAT
TTATGGCTTCATGCCAAGTAACATTATTTATGAACAAATAGGAACTACAGTAATGTACT---------------------
--------------------------------------------------------------------------------
-------------------------------------------------------CTATTATCACTGCTCAGATAATACA
CTTCCTCAGCACTTCATCACTGATGCATTTCCTACTTTCCTCATGATATGAAACAGGTTGTGTTGGAGAGAAATGAACTG
CGTGATGACAACAGCATGCTTCGCAATGAAATCCTGGAGCTTCAGAACAAGCTTAGAGTGCGTCTGCAAAGCAACCCTAT
TTGGAGCCAGGATACTAC---AAGATCAGCCGTTGCAGTACCTTATCCCACAAGCGGAATGTTCCCAGTACAACATTCGC
CACACTCACCAGTCATCACCTCGACGGCACTTTCACTGCAACCTGTAATCACTGAGCAATGCTATGCCGCCCCACCACGA
GAGCTGCAGCTCTTCCCGGAAGCTTCATCTGCATCCACTGAAGACAGCGAACTGTCACAAGACCAGGGGATTTCCAATAA
TGTGACACGGCCCCAGGCACGGTACCCAACACCAGCGGTGATGTCGCCAGTAAACGAATTCCCAATCCTTCCAAGGATGG
GGGAGGAGCAACAATATAGTAGTGGCACTAGCGAGGAAGACGGTGTGCACAGGGTTTAAGTACATAACACAATTTGCTTC
ACCGTCTGAAAAGTTTCT-TAGTGTGAGTGGAGTGA------CTGCAACAGATACATATGTAGCTGTGTATGTAAACTCC
AACCTGTCTCCCAATCTTGGTCTTAACGGGTTAAATAGGTGATAATAAAAACTGCTTTACCCCCGAATCTTGTATCTGAT
AACTGCACATGTATGGATTGCTCTTC----------------------------------------AGTCACCTGTGCAG
AAGTATATTTCCGCATCGACAGTCCAA------GATCAGTTAGTGGTCGTTGCTTCAATTCAGCACGGTTAGATATCTGA
GGAAGACACCTCAATGGCGCTGCAACCCGCTTCTTTCCTGTCCATGACCATTTTCTGCCCTTGCGAATCCCTGGCCTGTG
CTATTTCATCCCAACGGTCTCCCAGTGCATATGCGTTCGACAGCAGAATGGTATCTGACGGATGGTAATTGCCCATGGCG
TCCAGCCTTGCCTGCACCGTCCTCCCCAGTTCGACATTGCCATGAACTCTGCAGGCTGCAAGTAAAGTTCTCCATCCCAT
AGCATCGCCATGGGACGACAAACTTCTTATAAGCTCATACGCTTCATCCAATCGCCCTGCCTTTCCGAGGAGATCGATGA
TGCAGCCATAGTGTTCGGTGTGAGGAGACATACCATATTTCCGGACCATGCTCTCGAGGTGCTTCTTCCCTTCAAACACT
AACCCGCCATGGCTACAAGCATTCAGCACAGCAAGAAAGGTAACCTCGTTAGGAGTGACACCGTCTTGCTGCATTGAGTG
AAACAGTGATATTGCGGCATCTGACTGCCCATTAACCCCCAACCCCATGATCATCGCAGTCCATGCCATCACATCCCTGT
CGCGCATTGCATAAAAAACTGCAATTGCCTCCTTTGGGTACCCACACTTGAAGTACATATCCACGAGCGATGTTCCTAGT
GCAGTGTCAAGCTCAAGACCAA---
>SNPs
----------------------------------SSS--------------------------S------S---------
--SS---------------------S-------------S-S----------------SS--------------------
------S---S-----------------S-------------------S----------------------S--------
---------------------SSSSSSS--SSSSS-SSSS-SS-----S-SS----------------------------
-------S--S--S----SS--S----------SS-S--S-SS-SSSS-----S------------S-------------
-------SSSSSSS--S-S-S-------S----------------S----------------------------------
----S-----S----------------S---------------S------------------------------------
---S------------------------S---SSSSSS--S----------------S-----S----------------
----------------------S--------------------------S---S--------------------------
--------------------------------------------------------------------------------
-----------------------------------------S--S----------S------------------------
-------------------SS------SSSSS-SSSSS-----------------------S------------------
----------------------S--SS-S------------------------S---------------------SS---
-------S---SSSSSSS-----------SSS-SSS--S---------------------S-----S-------------
-----------------------------------S--------------------------S--S--------------
-S---S--------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------S--------------
-------------------------------SS-----S-S------S--------------------S---S-------
------S-----------S--------------S-S-----SSSSS-----S------------S---------------
----S------------------------S-----------------S-----------SS-------------------
-S------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------S-----------------S---S-----------------------------------------------
----------------S---------------------------------------------------------------
--------------------------------------------------------------------------------
------------------S-------------------------------------------------------------
-------------------------------------S----------------------------------S-------
---------------S------------------------S----------SSS-SS-SSSSSSS-SSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------S-----------
--------------------------------------------------------------------------------
-------------------------S--------------S--S------------------------------------
--------------------------------------------------------------------------------
------S-S------------------------------------S----------------------------------
--------------------------------------------------------------------------------
--------S---------------------------------S---------------S---------------------
------------------S-------------------------------------------------------------
---------------------------------------------SS------------S-S-----------------S
-------------S-----------S------S-----S----------S------------------------------
---------S---------------------------------S------------------------------S-----
------------------------S---S--------------------------S------------------------
------------------S-------------------------------------------------------------
---S-----------------------------------------------------S----------------------
----------------------S---------------------------------------------------------
-----------------------S---------------------------------------S----------S-----
--------------------------------------------------------------------------------
-------------------------S--------S---------------------------------------------
-----------------S-------
>forward_1052
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------GTGTGGAG
GAACTGACGGAG--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------
>reverse_2986
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------AGCACTTTCTCTGCATCCCG-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------
>forward_1513
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------TTCGGTGTGGCTTCTTGTGT-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------
>reverse_3534
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------AATCGACAGTCCGACCTTGT-----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------
