>input_sequence_37523
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---------------------------------------------------------------------------ATGGG
CGGACGGGTGGATCACGAGTACTCCTACCTGTTCAAGATGGTGCTCATCGGGGATAGCGGCGTCGGCAAGTCCAACATAC
TCTCCCGATTCACCCGCAACCACTTCTCCCTCGACTCCAAGTCCACCATCGGCGTGGAGTTCGCCACCAAGTCCTTGCAG
GTCCGCATTCTCTCCCCTCGCATTTCTGCTATATCAAATCGGAAGATGTTCGACACGCGTGCGTGCGTTTTTGGTATGGC
CTCGGACCGATGATGACACACCGGATCATGGTCCTCTTGATCCTGTTGTGGCGAATGGGGAAAGTTATCTCGGTGACGGC
GTTTGTTGCCACCATCAAACTTGCTCGTTTCTCACGAGTTTTTGGTTCTCGGACGGAAGGATGGCTCGCTCGATTGAGAC
TTCAGAATGTTCTATCAAATCTTCTTAGGTGGATCATTAGGAACAAACTCTGCTTCACAAATAGCAAACGCATTGAATTA
CTGTAGTTGCCATTTGTCTTCCCTTATTCATCAGACTAGTTGTTAGACGTTGTTCTAACCTCGAGTCTGTCCATTACGTT
TAAGAGTTCTTTTTTGCATGCTAGATTCGCCTGGTTCCCCTTGGATCACATCATTAGGATTTTTATGGACTGATTGTTAG
GTTGATTGCGAGCTACAACCACTTTTTTTTTAATGTGGCATCCTGTCTGTTCTGTCTTCCAGG-----------------
--------------------GTTAGGTGAAACAAACCTGTCATCTCTATTGTCTTCGTTATGCATCGCCATTATTATTAT
TGTTATTCTCACCACGCCGCAGGTGTGGTGAGCAATCTTCAAATAATTCAAATTGTTGTTGTTGTTGTTGTTGTTATCCC
TCCATTTAGTACTTATACAAGGCCACTATGGAATATACATTTTGCATCTATATAAGGCCATCAACAGTAATCGAGGGCAA
AATTAATGATATTTTCTTGTACTAGTAACTTAATTAATACTTGCATGCATGCAGTCATAAAATAACACACAACTATTCTT
TCTTTGCATGCATGTGGCGTATAAACTATCCCAGTAGACAAAAAGAAAAGTTGACTTGCAAAGGACATATTAAATTTTAT
CTTGGTAAATGTAATATGAGTTTGTGACCTTATACTACCTGCGTCTCGGTGAATAAGTCATTCGCGTAGTTCTTGGTCGA
CGATTTAACTATCTAAATATGTATTATATGTGACAAAAAATATATATTTAGAAACTACATCCGTGTAGAAATCTAGTGAT
ATACTCCCTCCGTAAACTAATATAAGAGTGTTTAGATCACTACTTTAGTAATCTAAACGCTCTTATATTAGTTTACAGAG
GGAGTACTTTTCATGACAACACATATTTAATTCCTCAAATCGATGACCTAAAACTACACAAATGACTTATTCACCTAGAT
GGAGGTAGTATATAAAAATGAAGGGAGTACAATTATTGTTATAATTGTGGCATTTAACAGCCTCCTTTTTAGTGCAACAG
CAGTGCCACTTTTCCTGTGGATTTAGCTCATCACCTACTC--AATTTATTATCTTTCTTCTACTTCAGAAGATAGTTTGT
GTTGGAAGCCATGGACTTACTGGTCCAGCTATTTTTTGACGTCTGATTGTGAATGGTGTTGTTAACAGATGGAGGGAAAA
ACAATAAAGGCTCAGATCTGGGACACTGCTGGCCAGGAGAGGTACCGTGCAATTACAAGCGCATATTACCGGGGCGCTGT
AGGGGCTCTCCTTGTATATGACATCACAAAGAAGCAGAGCTTTGACAATGTTAATAGGTGGCTGCGTGAGCTTCGTGATC
ATGCTGACTCCAGCATTGTCATCATGATGGTCGGTAACAAGTCTGACCTGACACAACTAAGAGCTGTCTCTGAAGATCAA
GGCAAGGCACTGGCTGAAAAGGAGGGCCTGTTTTTCCTTGAGACATCAGCTATGGAGGCTGTAAATGTGGTAGAAGCCTT
TCAGACTATCATCACAGAGGTCTATGGTATTGTCAACAAGAAAGCACTGGCCGCCAAAGAAGCAGCAGCAGCAGCTGTTC
CATTGCCTTCCCAGGGTAAAACCATCAGCATTGACAGTACTGCCGGGAACTCAAAGAGGGCATGCTGCAATACTTGA---
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-----------
>chr1B_1_TraesCS1B01G150900
AAGGAGGACAAACATGACTTGTCCGACGCTCCCCGCGCGTCATCGTGCTTTTGCTGCCAACCACTATCGTGCAACAGCAA
GCCACGAATAGACGCAACAACGCAGACTCCACCACCACC---------------------ACCTCTCCAAAACAATGCTT
CCAACGAAATAAGGCTGCCAAGGCCGCCCCATTGGCCATTCGACGAGGCAGATCTAGGTTTTCACCCAGAAAATGGATCC
CAAATGGCAAAAGGGTGAAAAATCTCCTCGGTGATGCCTTCAAGGAAAACAACATCCACAGATGTTGCCATCACCTGCAT
TCTGC---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------GTCGAGCAAGACTTTGGTCCGGCGAGTCTACACCTAACGCCGCACCGCCATTAGCAGACCACACACCATCAC
ATGTCGCTCAACTCCAGCACATCATGCACCGGCACCTCAAGCTGCACCAAAAGCAACCCAGGCACCCAACGCAGCCGGGA
CGCGACCAGATCTGGCCCGCCCACCTGCTCGCAGTCGTCGCTGCCTCCTCGCCCGAGGCCAGGT----------------
--------------------------------------------------------------------------------
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-----------------------------------------------------AACGCCCTGCCGCCGCTATCATCGGAG
CCGGCCAGGCTTCGCCGATGAGCCCCTGAGGTGACGGCGAGGGGAGGAGGGGAGAAGGAGGTGGGACGGCGGTGGATCTG
AGTTTCCAAAGG--GGGCGACGTGGGAGTCGAGTGTGTGATGGAAACTGATACATTTACATGTGTCATAGCTACGACCGC
ATATCAACCCCGTGACAGCAAGTACACATCGAAATAGAACGGAAATTCCTTGATGGTGGGCT------------------
-----------------------------------------------------------------------------GTG
AATCGACTTTCGTTGGGTTAGTTGAGCGAGTGCTCTCCCACCCACCAGGCCAGCCACCCCAGTCAGGCCACCACTCCTCC
CTACTTTTCTC-CTTTTCTTCATTCGCCACCCT---ATATCTCCTTCGTCT-TCTCTCCTCCTCCCCACCAACAAGGGGA
TCCACGCTCGCTTGATTTTCATTTCGGAAGAATAAATTTAATTTTTGGTCTCAGAGTAGAAGGTGAGGAGAAGAGATGGG
CGGACGGGTGGATCACGAGTACTCCTACCTGTTCAAGATGGTGCTCATCGGGGATAGCGGCGTCGGCAAGTCCAACATAC
TCTCCCGATTCACCCGCAACCACTTCTCCCTCGACTCCAAGTCCACCATCGGCGTGGAGTTCGCCACCAAGTCCTTGCAG
GTCCGCATTCTCTCCCCTCGCATTTCTGCTATATCAAATCGGAAGATGTTCGACACGCGTGCGTGCGTTTTTGGTATGGC
CTCGGACCGATGATGACACACCGGATCATGGTCCTCTTGATCCTGTTGTGGCGAATGGGGAAAGTTATCTCGGTGACGGC
GTTTGTTGCCACCATCAAACTTGCTCGTTTCTCACGAGTTTTTGGTTCTCGGACGGAAGGATGGCTCGCTCGATTGAGAC
TTCAGAATGTTCTATCAAATCTTCTTAGGTGGATCATTAGGAACAAACTCTGCTTCACAAATAGCAAACGCATTGAATTA
CTGTAGTTGCCATTTGTCTTCCCTTATTCATCAGACTAGTTGTTAGACGTTGTTCTAACCTCGAGTCTGTCCATTACGTT
TAAGAGTTCTTTTTTGCATGCTAGATTCGCCTGGTTCCCCTTGGATCACATCATTAGGATTTTTATGGACTGATTGTTAG
GTTGATTGCGAGCTACAACCACTTTTTTTTTAATGTGGCATCCTGTCTGTTCTGTCTTCCAGG-----------------
--------------------GTTAGGTGAAACAAACCTGTCATCTCTATTGTCTTCGTTATGCATCGCCATTATTATTAT
TGTTATTCTCACCACGCCGCAGGTGTGGTGAGCAATCTTCAAATAATTCAAATTGTTGTTGTTGTTGTTGTTGTTATCCC
TCCATTTAGTACTTATACAAGGCCACTATGGAATATACATTTTGCATCTATATAAGGCCATCAACAGTAATCGAGGGCAA
AATTAATGATATTTTCTTGTACTAGTAACTTAATTAATACTTGCATGCATGCAGTCATAAAATAACACACAACTATTCTT
TCTTTGCATGCATGTGGCGTATAAACTATCCCAGTAGACAAAAAGAAAAGTTGACTTGCAAAGGACATATTAAATTTTAT
CTTGGTAAATGTAATATGAGTTTGTGACCTTATACTACCTGCGTCTCGGTGAATAAGTCATTCGCGTAGTTCTTGGTCGA
CGATTTAACTATCTAAATATGTATTATATGTGACAAAAAATATATATTTAGAAACTACATCCGTGTAGAAATCTAGTGAT
ATACTCCCTCCGTAAACTAATATAAGAGTGTTTAGATCACTACTTTAGTAATCTAAACGCTCTTATATTAGTTTACAGAG
GGAGTACTTTTCATGACAACACATATTTAATTCCTCAAATCGATGACCTAAAACTACACAAATGACTTATTCACCTAGAT
GGAGGTAGTATATAAAAATGAAGGGAGTACAATTATTGTTATAATTGTGGCATTTAACAGCCTCCTTTTTAGTGCAACAG
CAGTGCCACTTTTCCTGTGGATTTAGCTCATCACCTACTC--AATTTATTATCTTTCTTCTACTTCAGAAGATAGTTTGT
GTTGGAAGCCATGGACTTACTGGTCCAGCTATTTTTTGACGTCTGATTGTGAATGGTGTTGTTAACAGATGGAGGGAAAA
ACAATAAAGGCTCAGATCTGGGACACTGCTGGCCAGGAGAGGTACCGTGCAATTACAAGCGCATATTACCGGGGCGCTGT
AGGGGCTCTCCTTGTATATGACATCACAAAGAAGCAGAGCTTTGACAATGTTAATAGGTGGCTGCGTGAGCTTCGTGATC
ATGCTGACTCCAGCATTGTCATCATGATGGTCGGTAACAAGTCTGACCTGACACAACTAAGAGCTGTCTCTGAAGATCAA
GGCAAGGCACTGGCTGAAAAGGAGGGCCTGTTTTTCCTTGAGACATCAGCTATGGAGGCTGTAAATGTGGTAGAAGCCTT
TCAGACTATCATCACAGAGGTCTATGGTATTGTCAACAAGAAAGCACTGGCCGCCAAAGAAGCAGCAGCAGCAGCTGTTC
CATTGCCTTCCCAGGGTAAAACCATCAGCATTGACAGTACTGCCGGGAACTCAAAGAGGGCATGCTGCAATACTTGAAAT
GTAGACATCATACCGTAGAGAATCGGGAGCGGGAATCATCAGCAGAGCAGCTTAGTTGAACTGGTGCGAAGGCATTTCTA
CTCTTTTTGTTTCTCTGTTGTGCGAACATCCTGGAGTACACTGCCGTAGGGGCAGTTTGTTCAGCATTTCTGGAAGTTAG
ATGTGTGTATTAGGATTCTGTTCCATTTTCCACTATGAAAGTTACATTATAC----------------------------
-------------------------------------------------------TACAATGTATGTCGGATTATACATC
ATACCTGATAGGACCCAAAACAAGTTTCGTTAAACCCTTCTTGGTCTATATTTTTTATTTGCTGCCTTTTTGGTTTGCTA
ACTAGTTATGCTACTTCTGTCTTTGGAGAAGTATTACGTATTGGTGGGTCCTATGAGTTGTTGGCGCATTATACAACCTT
TGTTGGAAATTTATGTGTATTGTGGT------------------------------------------------------
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------------------------------------------------------------------------ATGAATTG
AATTAGTAATATGAGGCGTGGTTTCAGTATTACAAGGCAGCTGACA-GCGGTAGCTTAGAAGGACACCTAAGATATTTGG
TTTCAATGTTGC--ATGGATGGTGATATCGATGAAGATGCAAGGGTCAGATCAAAGCTCGACAGATGAATGGCGCCAAAC
TTTCG-CGTTATCTGTGACAAGAGAGTGCCTCAAATGTTAAAAGGCAGGTTGATGTACGGTAGAACCCTAGATGGCCTAA
TCTTTCATAACTTGGAGGGGATTCGAGGTGAACACACAAATCACCAAGGGGAACACTCCAAGACAAGTTCAATCACACAT
CCACTAAAATAACATATGAGATCCACAATAATACAAGGTCGACAAGAGGAAAAGAGTAGTAAGGGTTGTTCTTTCCAAAT
CCGAAGGAGATGGGGGCTTGATTATCTATCGGAGAGGAATGTTATATCCTCAATTGGTGTAAATGCCTAAGGCATATTCT
TTTTTTTTTAAGAATTTAAGGGGGGAGCCATATGTTTCAAGATTTAGGGGGAGAAGCACTCATTCTTGCTTCAGCTTTA-
CTGGTTTTCTC
>chr1D_2
-AGGAGGACAAACACGACTTGTCCAACGCTCCCTGCATGTCATCGTGCTTCTGCTGCTCACCACCGTCGTGCAACGGCAA
GCCATGAACAGACGTAGCAACGCAGATTCCACCACCACCAACCGGGTGCATCGACCGAGAACCTCTCAAAAACAATACTT
TCAACGAAGTAAGGCTGCCAAGGCCGCCCCATTGCCAATCCGACGAGGCGGATCTAGGCTTTCACCCAGAAAATGGATCC
CAAATGGCAAAAGGGTGACAAATCTCCTCGGTGATGCCTTCAAGGAAAACTACATCCACAAATGTTGCCATCACCTGCAT
GGTTTTAAATAGCGGATAGCGGGCTGGTAGCTGATTGGGGTCCCTGTAGCGGAATGTGGATAGCGGGCGATATTGCAGAC
CCTATGCCCACCTAGCGGATTTGTAAAAACACTAGATTGTTGTTTATATTTCTAGATCATTAACAAAAAGTGATGACATT
TTATTTGAGAAATAGTGAATGCTATTGCGCTAGCGCTATTGCGGACACAATAGCGGATGCTATCTCCGCTATTTGAAACT
ATGCCTGTGTCGAGCAAGACTTTCGTTCGGCCAATCTGCACCTAACACCGCACCACCACCAGCAGACCACACACCATCAC
ACGTCGCTCAACTCCAGCACATCTTGCACCGGCACCTCAAGCCGCACCAAAGGCAACCCAGGCACCCAACGTAGCCGGGA
CGCGACCAGATCTGGCCCACCCGCCTGCTCGCAGTCGTCGTTGCCTCCTCGCCCGAGGCCACGCAAAGCCCCCTAACTCG
CACCACACAGCTGGCCTGACGAGGAGCCCTCGCTAGAGTCACCTTAGCCCGCCATCGGTACAGAATGGGCCAGATCTCTC
TCCCTTTGTGTATAAATATTTCACATTTCGGATGCAAGTTTGAAAGATTGCCCTGCTTTTTATTTTCCTACACAAAAGAG
CCCCCTCCTGATTCACTAATTTGTAGGAAGGTACTGAACGTTTGGATTTGAAAAAAGTTTCAGAGGATATATCTAATGTA
GATGGTGATTGATAGAGCAATTCTTGCTCATAAGTTCCTGTATATGAGTACTCTCCTGCCGGCAACTTCCATCGCGCGCC
CACGGACGTGGCCACCGCAGCCGCCAGCCCCAACAGCCCACCTCCAACACTGCTCTCAGCTGTAACCAGCCCGAGACCCG
GCCGCAAGCCGACGACCGAGGCTATGCCTCCGGGAGCCGCCCCAGGCCAGGAGAACGCCCCGCCGCCGCCATCCTCGGAG
CCGGCCAGGCTTCGCCGGTGAGCCCCTCAGGTGACGGCGAGGGGAGGAGGGGAGAAGGAGGTAGGACGGCGGTGGATATG
GGGTCTCCAGAGGAGGGCGACGCGGGGGTCGAGTGTGTGATGGAAACTGGTACATCTACATGTGTCATAGCCACGACCGT
ATATCAACCCTTGACTTTTTTTGAACATCAGTACAGACGCACACACGCACATGCGTCTCCTCTCACTAAAAGTGCATCGC
CGAAAATTCTGAAATAAATTCAAGAATAATGCAAACACCATGACTTGAAGCCTGGTGGGTTGGGATACCACCGTCGCGTG
AATCGACTTTCGTTGGGTTAGTTGAGCGAGTGCTCTCCCACCCACCAGGCCAGCCACCCCGGTCAGGCCACCACTCCTCC
CTACTTTCTCCTCTTTCCTTCATTCGCCGTTCTCTAATATCTCCTTCGTCTTTCTCTCCTCCTCCCCACCAAGAAGGGGA
TCCACGCTCGCTTGATTTTCATTTGGGAAGAAGAAATTTAGTTTTTGGTCTCAGAGTAGAAGGTGAGGAGAAGAGATGGG
CGGACGGGTGGATCACGAGTACTCCTACCTGTTCAAGATGGTGCTCATCGGGGATAGCGGCGTCGGCAAGTCCAACATAC
TCTCCCGATTCACCCGCAACCACTTCTCCCTCGATTCCAAGTCTACCATCGGCGTGGAGTTCGCCACCAAGTCCTTGCAG
GTCCGCATTCTCTCCCCTCGCATTTCTGCTATATCTAATCGGAAGATGTTCGACACGCGTGCGTGCGTTTTTTGTATGGC
TTCGGACCGATGATGACACACCGGATCATGGTCCTCTTGATCCTGTTGTGGCGAATGGGGAAAGTTATCTCGGTGACGGC
GTTTGTTGCCACCATCAAACTTGCTCGTTTCTCACGAGTTTTTGGTTCTCGGACGGAAGGATGGCTGGCTCGTTTGAGAC
TTCAGAATGTTCTATCAAATCTTCATAGGTGGATCATTAGGAACAAACTCTGCTTCACAAATAGCAAACGCATTGAATTA
CTGTAGTTGCCATTCGTCTTCCCTTATTCATCAGACTAGTTGTTAGACGTTGTTCTAACCTCGAGTCTGTCCATTACGTT
TAAGAGTTCTTTTTTGCATGCTAGATTCGCCTGGTTCCCTTTGGATCACATCATTAGGATGTTGATGGACTGATTGTTAG
GTTGATTGCGAGCTACAGCCAC-TTTTTTTTAATGTGGCATCCTGTCTGTTCTGTCTTCCAGGGTTAGGTGAAACAAACC
TGTCTGTTCTGTCTTCCAGGGTTAGGTGAAACAAACCTGTCATCTCTATTGTCTTCCTTATGCATCGCCATTATCATTGT
TGTTATTCTCACCACGCTGCAGGTGTCGTGAGCAATCTTCAAATCATTCAAATTGTTGTTGTTGTTGCC------ATCCC
TCCATTTAGTACTTATACAAGGCCACTATGGAATATATATTTTGCATCTATACAAGGCCACCAACAGTA-----GGCCAA
AATTAATGACATTTCCTCGTACTAGTAACTTATTTAATACTTGTATGCATGCAGTCATAA--TAACACACAACTATTCCT
TCTTTGCATGCATGCGGCGTATTAATTATCCCAGTAAACAAAAAGAAAAGTTGACTTGCAAAGCACATATTAAATTTTAC
CTTGGTACATGTAATATGAGTTTGTGATCTT-------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------GTATATAAAATTGGAGGGAGTACAATTATTGTTATAATTGTGGCATTTAACAGCCTCCTTCTTAGTGCAACAG
CAGTGCCACTTTTCCTGTGGATTTAGCTCATCAGCTACTCTCAATCTATTATCTTTCTTCTACTTCAGAAGATAGTTTGT
GTTGGAAGCCATGAACTCACTGGTCCAGCTACTTTTTGACGTCTGATTGTGAATGGTGTTGTTAACAGATGGAGGGAAAA
ACAATAAAGGCTCAGATCTGGGACACAGCTGGTCAGGAGAGGTACCGTGCAATTACAAGCGCATATTACCGGGGCGCTGT
AGGGGCTCTCCTTGTATATGACATCACAAAGAAGCAGAGCTTTGACAATGTTAATAGGTGGCTGCGTGAGCTCCGTGATC
ACGCTGACTCTAGCATTGTCATCATGATGGTCGGTAACAAGTCTGACCTGACACATCTAAGAGCTGTCTCTGAAGATCAA
GGCAAGGCACTGGCTGAAAAGGAGGGCCTGTTTTTCCTTGAGACATCAGCTATGGAGGCTGTAAATGTGGTAGAAGCCTT
TCAGACTATCATCACAGAGGTCTATGGTATTGTTAACAAGAAAGCACTGGCCGCCAAAGCAGCAGCAGCAGCAGCTGTTC
CATTGCCTTCCCAGGGTAAAACCATCAGCATTGACAGTACTGCCGGGAACTCAAAGAAGGCATGCTGCAATACTTGAAAT
GTAGACATCATACCGTAGAGAATCGGGAGCGGGAATCATCAGCAGAGCAGCTTAGTTGAACTGGTGCGAAGGCATTTCTA
CTCTTTTTGTTTCTCTGTTGCGCGAACATCCTGGAGTACACTGCCGTAGGG-CAGTTTGTTCAGCATTTCTGGAAGTTAG
ATGTGTGTATTAGGATTATGTTCCATTTTCCGCTATGAAAATTACATTATACTACCTCTGTAAACAAATATAGGAGCGCT
TATATCACTACTTTAATGATCTAAACACTCTTATATTTCTTTACGGAGGAAGTACTACAATATATGTTGGATTATACGTC
ATACTTTATAGGACCCAAAACAAGTTTCGTTAAACCCTTCTTGGTCTATATTTTTTATTTGCTGCCTTTTTGGTTTGCTA
ACTAGTTATGCTACTTCTGTCTTTGAAGAAGTA-----------------------------------------------
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>chr1D_3476
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--------------------------------ATTACGTACTGGTGGGTCCTATGAGTTGTTGGCGCATTATATAACCTT
CGTTGGAAATTTCTGAATATTGTGGATGATTTGAATGAAATTGCCTGGGAGCACTCGGCGACTACCCCCCCTGGAATCTG
TTCCATCAATTCCCCTCGAGATCCGAAATCACTATATTAGCTGTTTTGTATCCAGACATTCTTCCTCACGTATTCATCAT
GCACTGCAGTGTATGTCCGTACTAAAGTTCACGCGTTTCTGTTCCTAGACAGAGAAACTTCCGTCCAAACGCGGGACCGC
CCACATGCACCATATCCCCAACCACCATCATCCCAACTACCAAACACTGTTAAATGCACCCGCTCCTCCAACGGCTCTTA
GACAATTCACACGCAACGGTCATCTTCTTCCTTGGTCATGCTCATATTAAAGTTCATCTTCCTCACATCTCCCATGTCCT
GCCTTTTCATTCACCTCATACATAGATGGTTCTGATAAGCAGATCAAGCTCAACACTTCCAATGTCAAGCTCTTCGTCCC
CCCCTTCTTCCACTCGATGAGCAGCCCCCCTCTCCCCGTTTTGCAACAACGGGATGGTTCAGTGCTGGGTTTCTCACACC
AAAACCAATCCAGGGAAGAACTTTTACTGTTTGTGAGCACGAGTGGTTATGTCCAAATATGGTTCCCTTGTTTTATGGTG
TATCATTTTATTTCCTTACTAATTCCTACAGTTTTTTGCTATTTTTTAGTCCCGCAAATGCAACTTCTGGAAATGTGAAG
AAAACTACATCAATGTCATATGCGCCAAGTGGCCAAGGCTGTTCACTGTTCCATCTCGCGAAGACCGCAAATTCCACCGC
TGCATCATCGCTCTTCTAATACTCATTCTGTTTTCAGTGATGTTCATCTGCTGCAAAGTCGCTTGAAGCTGCCCAATCCT
GCACCCATGAGACCGTGCAGTGGGGCGGCAAGGTGGAGGATGCCGTGATCTTTAATTTAGTCCTTCGTCTTGCAGATAAT
AAATCAGTAATCATTGAGTCCTAAAGCACTGTCTGCCCCCATGAGACGGACTATGTAATTCCAATTACCATGTAATTTAT
TTAATATTTCATGTTCCGCATTTACTCGTTTCCAATATAATATCATTTTCACTTTAGCAAATCTTTATTTATTTCCTTTT
CTCTCCATCACTCTGCTACACTCCCCTCGAATTATTAAAATCAAATTGCCTGTACTCATCTGCTAGGACTTATTTGTTAC
ACAAATTGATTTTCCTTAAACCTCAAATTAAAGGTATGTCTGTACTGTCATATAACTTACCGACGTAACAAACTTTATCA
CACACAGCTCAAATATCTCATTTCGTCCCGTGCACAACATGCATCCAGGCCTTTGCTCACAACTACCATGCAAACATCAA
ATGACTGCAGAAATTACACGCCAATTCAATGTGCCATGTCCCACCACGCCGACCAGCCAGCACTCCATCGCTTTACCACA
ATAAAAGCAGTTTCAACAATCTTTTTAGTGAGCGGATTGTGCAGTAAGAATATGAATGATTTTCTTTAAAAACAAGCTAG
TTTACCTTCCATGGAAGCCGTTTTCCGGATCGACCTGGGGATCTGGCAACGGAATCATATCTTTTCTCCAAGATCTATAA
CTCCTCGGACTTGTACCAAAACAATATCTCTTGTCTGGTGAAAGAAAAGGGATAGTAGATCGTTGTGGAAGAAGAACAGT
ATGTTCGCTGAGAGCTTTCTTCCCTCTCCTCAGATCTAGCAATGCAGTCTTCCTAGGGTTGGCCTTAACTCGTGAAGGTA
TGTGCAGGAGGTTCGAATTGATTATGGTGGCCGAACTGTACAGTGCTCTAATGGGCCCCTATGCAGTTACAGTTAATGCC
GATGGACAGGTACAAACTGTTCAAGCATACGCTACAGGTCGTGTATAGCCAGGGAAAACTATTTTACAATTATGTTGCAC
ACATCCCGAGACAGTGCAGCAGCGGATGTGATTTCGATGGGTGGAGTCGCCGAGTGCTCTTAGTTCGCGTCCATGATTTG
AATTAGTAATATGAGGTGTGGTTTCAGTATTAGAAGGCAGCCGACAAGCGGTATCTTAGAAGGACACCAAAGATATTTGG
TTTGAATTTTGCAAATGGATGGTGATATCGATGAAGATGCAAGGGTCAGATCAAAGCTCGATAGACGAATGGCGCCAAAC
CTCCGGCGTTCTCTGTGATAAGAGAGTGCCTCAAAAGTTAAAAGGCAGGTTGATGTACGGTAGAACCATAGGTGGCCTCA
TCTTTCATAACTTGGAGGGGATTCAAGGTGAACACACAAATCACCAAGGGAAACACTCCAAGATAAGTTCAATCACACAT
CCACTAGAATAACATATGAGATCCACAAGAATACAAGGTCGACAAGAGGAAAAGAGTAGTAAGGGTTGTTCTTTCCAAAT
CCTAAGGAGATGGGGGCTTGATTATCTATTGGAGAGGAATGTTATATCCTCAATTGGTGTAAATGCCTAAGGCATATTTT
TTTGTAAAGAGGAATTTAAGGGGGGAGCCATATGTTTCAAGATTTAGGGG-AGAAGCACTCATTCTTGCTTCAGTTTTTT
CTGGTTTTCTC
>SNPs
S-------------S---------S--------S--SS------------S------SS-----SS---------S----
----S---S-----S-S---------S----------------------------------------S--------S---
S-------S-------------------------S-S--S---------S--------S---------------------
------------------S-------------------------------S---------S-------------------
SS-SS---------------------------------------------------------------------------
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-----------------------S--S----S-S---S--------S-------S---SS--------------------
-S---------------------S------------------S--------S-------------------S--------
------------------S---S-----------------S--------------------S-S----------------
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------------------------------------------------------------S--------S---S------
-----------------S---------S----------------------------------S--------------S--
S-S-SS-S-SS-----------S---S----------------------S-----S---------------S-------S
----------SSSSSSSSSSSSS-SSSSSS-S-SSSSSS-SS-S-SS-SSSSSS-SSSSSSS------------------
--------------------------------------------------------------------------------
------------------------------------------------------------S-------------------
-------SSS------S-----------SSS-----------------------------------------S-------
------------------------S-------S-------S---------------------------------------
--------------------------------------------------------------------------------
----------------------------------S--------S------------------------------------
-----------------------------------S------------------------------------S-------
S-------------------------------------------------------------------------------
------------------------------------------------------------------S-----S-------
------------------------S-------------------------------------------------------
--------------S-----------------------------------------------------------------
---------------------------------------S--------------------S--S----------------
-----------------S----S---------------------------------------------------------
--------------------------------------------------------S-----------------S---S-
-----------------S--------S-----------------S----------------------SSSSSSSS-----
-------------------------------------S--------------S-------S--------SSSSS--S---
---------S----S--S--------------S----------S----------------SS----------------S-
--------------S-------S--S----------S--------------------------S---------------S
-------S-------------------S---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSS----------S--S----------------------------------------------S------------
---------------------------------S-----------S----------------------------------
-------------S---S-------------S------------------------------------------------
--------------------------S-----S-----------------------------------------------
------------------------------------------------------------------------S-------
-S--------S--------------------------------------------S------------------------
--------------------------------------------------------------------------------
---------------------------------S-------------------------S--------------------
---------------------------------------------------------S----------------------
--------------------------------------------------------------------------------
--------------------S------------------------------S----------------------------
-----------------S-------------S--------S---------------------------------------
-------------------------------------------------------------S-----S---------S--
----S-S-------------------------------------------------------------------------
-------------------------S--------------S--------------------------------S------
S-----------S--SS--------S------------------------------------------------------
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----------------------------------------------------------------------------S---
----------------S---------------S--------S-----------S--------------S-----------
---S---S-----------------------------------------------------S---S--------------
S-S-------S-------S----------------S-------------------------------S---S------S-
------------------------S-------------------------S------------S----------------
------S---------------------S---------------------------------------------------
--S--------------------------S------------------------------------------------S-
---S-SSSS-S---------------------------------------S-----------------------S---S-
-----------
>forward_1368
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--------------------------------------------------------------------GCGGTGGATCTG
AGTTTCCA------------------------------------------------------------------------
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>reverse_2993
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--------------------------------TACTACCTGCGTCTCGGTGA----------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------
>forward_1440
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------TGTGTCATAGCTACGACCGC
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------
>reverse_3022
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------------------TCGCGTAGTTCTTGGTCGA
C-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------
>forward_3012
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------TACTACCTGCGTCTCGGTGA----------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------
>reverse_6626
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------------------------------TGAATGGCGCCAAAC
TTTCG---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------
