>input_sequence_37415
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-------------------------------------------ATGCTTCGTCGTCAACCAGTCGAGTCTCTCCAACCCC
ATCTCCTCTTCAACTCCTCAAACCCTCACACCGCAACTCACAGGCTCAACCAAGAAACCAACCACTTTGCATCGAGAGGA
TCGTTGCCAGTTCTTCCGTCTCTTGCTCTTGCATTGAGCGGTCCATCTTCGATTACCGCGGAGG-----TCGTGTCACCG
ATGGCTTCACCAAAGACGTGGAGGTCTATGTTCTGCTGCGTCGGAGGAGCAGGGGCGGGGGCTGCCGCCGATGCCGACGA
CGAAGGGCCGTCGCCGTCTTCCACGCCGAGGAGGAGAAGAGGGGACAGAAGGGCGCTGCTGCCGTCGTCGTCCGCGTCGA
CGGCGTCCAGGGTCTCCCTGTCCAGCCTGGGGTCGACGGGCACGCTGACGCCGGAGGACCTCTCGCTGACGCTGTCGGGT
TCCAACCTGCACGCCTTCACCTACGCCGAGCTCAGGGCGGCCACCGCCGGCTTCTCCCGCTCCAGGTACCTCGGCTGCGG
CGGCTTCGGGCCCGTGTATAAGGGCCAGCTCGCCGCCGAGCTCCGGCCGGGCCTGGAGGCGCAGACGGTCGCCGTCAAGT
ACCTTGACCTCGACTCCAGCTCGCAGGGCCATAACGAGTGGCTGGTAAGTCGACCTACTGACTCCACCATTGTTGCACTT
GCACGCACGGATGCATGAGCTGTCAAATAACT--CCTCCATTATTGCGCCAACTAACTTCTCCAT-----GATTGATTC-
TGCAGGCGGAGGTGTTCTTCCTTGGGCAACTGAGGCACAAGAACCTGGTGAAGCTCGTCGGGTACTGCTACGAGGAGGAG
CACCGCATGCTGGCGTACGAGTTCATGGGGACCGGCAGCCTGGAGAAGCACCTGTTCAGAAGCATCGACGGCCCCATGCC
GTGGATGACGAGGATGAAGATCGCCGTCGGCGCCGCCAAGGGCCTCGCCTTCCTCCACGGCGCCGACACGCCGGTCATCT
TCCGCGACCTCAAGGCGTCCAACATCTTGCTCGACTCGGTGAGTCAACTCAACTGCCCGATTAATCCAATCATCTCACCA
TTTTTGAGACTTGACCACGAGTTGGCAATAGAGCAACTTGTGGACGGATGAATGTCAAAGTCTGACACCCGTTTCAAACA
GCTGGCC-------------------------------------------------------------------------
-------------TCGCTGGAAAAGCCAGCGGCGCCATGATTAGGACTTGGAATTGGAAGGTTCCTGGATGCCCATTTCT
CACATAAATCCTACC---CACAATCAATAAATCTGTACCCACAATCA------------ATTATGTCAGTATCAAAGCAA
CAGCCTGACAGATACAGCTTAGCACGATAGGAACGTTGTCATGTTAAGTACATGCATATATCACTCCAGTTGTGTTTGTC
ACAAGTTATCTTTGCCTAACCTAATCTGCTTCTTGCATTTCAGGACTATACCGCCAAGCTGTCAGACTTCGGCCTCGCCA
AGGACGGGCCCAACGGCGACGCCACTCATGTCACGACACGTATCATGGGGACACATGGATATGCCGCACCAGAGTACATC
ATGACGGGGCACCTGACCGCCAAGAGCGACGTCTATAGCTTCGGCGTGGTGCTCCTCGAGCTATTATCGGGTCGGCGGTC
CATTGACCGTGCTCGACGTTTCAGGGAGCAAAGCTTGGTCGACTATGCCAGGCCATACCTCAAGAAGCAGGACAAGCTGC
ACCGGGTCATGGATCCGGCTTTGGAATGCCAGTACTCGTGCCAGGGGGCCGAACTGGCCGCACGAGTGGCGTACAAATGC
TTGAGCCAAAACTCAAAGTTGAGGCCCACCATGAAAGAGGTCGTTCAGGCCCTAGAGCCCATACTCAAGATGGACGACTA
CCTACAAGTGGGTCCATTCGTGTTCACAGTCGTAGTGGAAAATACCGAGAAAAACGTTGGGAGCAAAGGAAAGCTTATTG
GTGACGAGTGGAAGGCTGACATGAAGGTTGAGAAGATTGTAGAGGACAAGCAGCAGAGCCACCAAGATCGGCACCGGCAA
AAGTTCCCAAACTCAACGATACACGCCGACATTTTGCTGCAACGGGATGGTGCCATCGGGCCTTATACCACCGCGCTACA
ACGTCACCGAAGAGCATCAAGTTACACCGAGGAAAGGGGTGCATAG----------------------------------
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>chr1B_1_TraesCS1B01G109400
GCAAAACTGCAATGTTATGATAACCATGTTGCTAAGTTTCTTGGAAGGCGCCCAGGGGTGGGGCTGTCACAGACAAACAT
CATAATGCAATAATGCAAGTGCCTCCGAAGCACAGGCAACACAAGTTGCTCGCGACTCCTTGACCTGTAAAATTGTACTC
GTAGAAAAGAGTATTGTGCACGTACGGCCGATCAGCACAGAGCGTGCAACGCATCTCAGCATCCAACCTGTCGATCATCT
GGTCACTCAATATTCTCCGATCTCCTCCACACGTGTCATTATTCATGCAAGGATCAACA-------------GAAAAACG
ACGAGCGCATAAACACGAGAACCGGCCGGAAGTTGCACCCGCTCTGCTGTGGGTGGGAGGCGAGATTTGCTGGAACCAGA
TTCTGCTTGATGCTGCATGCTCTACCAGCTTCAGGTAGCACCTCGCGGCTTCCTTACC------AGCTTCCACTGTCACC
CAGCGCTGCTG-----------GCTG------------------------------------------------------
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---------------------------------------AAAACCATTTTACTAGCAGAAGAACATGGACCTAGCTAGAA
GAGGCAAGTATCCTCTCTCGTACTA---AAACATTCAGCTGTCTGCCT----GATCGGCATATGTTGAGTTTTCACGTGG
CCTGACATCTGTCACTAGTTAATTTGCATCGCCGATCGGTCAATCACGGCCAGCATCGACACGGAGCGC----------C
CCGCTTCAAGCAACCTCACGTTTTCCACCCGTTCCGTCGCGCGCCGGGTCAGCGTCACGCACGTAAAGCGGTGTGACGCG
CCCACGCACCAGATTCCAGATTACCGGTCTCCCGTGGCATCTCCCTCCC-CGCCCGTTCCGTACGAGGG-AAAGGAGAGG
AAGGTGTGAATAGTCAAGCCCGGGAA-GCTCAACG----ACTCGTCTGCTGC------TTTTTGTTCGCTACTGCTCGCA
GGCCCGCGCGTCGCGGCTTCTTCGTGCCCCGCGACAGGGTCAAGGCAAGCCAACACCGCGCACGATTCCGTTCCCTCCCG
TGCCCGCCAT----------TATATACCCGCCGTCGCCCACCGATGCTTCGTCGTCAACCAGTCGAGTCTCTCCAACCCC
ATCTCCTCTTCAACTCCTCAAACCCTCACACCGCAACTCACAGGCTCAACCAAGAAACCAACCACTTTGCATCGAGAGGA
TCGTTGCCAGTTCTTCCGTCTCTTGCTCTTGCATTGAGCGGTCCATCTTCGATTACCGCGGAGG-----TCGTGTCACCG
ATGGCTTCACCAAAGACGTGGAGGTCTATGTTCTGCTGCGTCGGAGGAGCAGGGGCGGGGGCTGCCGCCGATGCCGACGA
CGAAGGGCCGTCGCCGTCTTCCACGCCGAGGAGGAGAAGAGGGGACAGAAGGGCGCTGCTGCCGTCGTCGTCCGCGTCGA
CGGCGTCCAGGGTCTCCCTGTCCAGCCTGGGGTCGACGGGCACGCTGACGCCGGAGGACCTCTCGCTGACGCTGTCGGGT
TCCAACCTGCACGCCTTCACCTACGCCGAGCTCAGGGCGGCCACCGCCGGCTTCTCCCGCTCCAGGTACCTCGGCTGCGG
CGGCTTCGGGCCCGTGTATAAGGGCCAGCTCGCCGCCGAGCTCCGGCCGGGCCTGGAGGCGCAGACGGTCGCCGTCAAGT
ACCTTGACCTCGACTCCAGCTCGCAGGGCCATAACGAGTGGCTGGTAAGTCGACCTACTGACTCCACCATTGTTGCACTT
GCACGCACGGATGCATGAGCTGTCAAATAACT--CCTCCATTATTGCGCCAACTAACTTCTCCAT-----GATTGATTC-
TGCAGGCGGAGGTGTTCTTCCTTGGGCAACTGAGGCACAAGAACCTGGTGAAGCTCGTCGGGTACTGCTACGAGGAGGAG
CACCGCATGCTGGCGTACGAGTTCATGGGGACCGGCAGCCTGGAGAAGCACCTGTTCAGAAGCATCGACGGCCCCATGCC
GTGGATGACGAGGATGAAGATCGCCGTCGGCGCCGCCAAGGGCCTCGCCTTCCTCCACGGCGCCGACACGCCGGTCATCT
TCCGCGACCTCAAGGCGTCCAACATCTTGCTCGACTCGGTGAGTCAACTCAACTGCCCGATTAATCCAATCATCTCACCA
TTTTTGAGACTTGACCACGAGTTGGCAATAGAGCAACTTGTGGACGGATGAATGTCAAAGTCTGACACCCGTTTCAAACA
GCTGGCC-------------------------------------------------------------------------
-------------TCGCTGGAAAAGCCAGCGGCGCCATGATTAGGACTTGGAATTGGAAGGTTCCTGGATGCCCATTTCT
CACATAAATCCTACC---CACAATCAATAAATCTGTACCCACAATCA------------ATTATGTCAGTATCAAAGCAA
CAGCCTGACAGATACAGCTTAGCACGATAGGAACGTTGTCATGTTAAGTACATGCATATATCACTCCAGTTGTGTTTGTC
ACAAGTTATCTTTGCCTAACCTAATCTGCTTCTTGCATTTCAGGACTATACCGCCAAGCTGTCAGACTTCGGCCTCGCCA
AGGACGGGCCCAACGGCGACGCCACTCATGTCACGACACGTATCATGGGGACACATGGATATGCCGCACCAGAGTACATC
ATGACGGGGCACCTGACCGCCAAGAGCGACGTCTATAGCTTCGGCGTGGTGCTCCTCGAGCTATTATCGGGTCGGCGGTC
CATTGACCGTGCTCGACGTTTCAGGGAGCAAAGCTTGGTCGACTATGCCAGGCCATACCTCAAGAAGCAGGACAAGCTGC
ACCGGGTCATGGATCCGGCTTTGGAATGCCAGTACTCGTGCCAGGGGGCCGAACTGGCCGCACGAGTGGCGTACAAATGC
TTGAGCCAAAACTCAAAGTTGAGGCCCACCATGAAAGAGGTCGTTCAGGCCCTAGAGCCCATACTCAAGATGGACGACTA
CCTACAAGTGGGTCCATTCGTGTTCACAGTCGTAGTGGAAAATACCGAGAAAAACGTTGGGAGCAAAGGAAAGCTTATTG
GTGACGAGTGGAAGGCTGACATGAAGGTTGAGAAGATTGTAGAGGACAAGCAGCAGAGCCACCAAGATCGGCACCGGCAA
AAGTTCCCAAACTCAACGATACACGCCGACATTTTGCTGCAACGGGATGGTGCCATCGGGCCTTATACCACCGCGCTACA
ACGTCACCGAAGAGCATCAAGTTACACCGAGGAAAGGGGTGCATAGTGTTGATCATCACAGAGCTTAGTTAGGACCGCTG
TAAAGGAGTAAGAGTAGCAAAATGGAAGATTGTACATATTTGAACTAGATCCTGTAGGGGTGTAACACAAGTCACGGATA
GTGAAGCTGGGTGTAAATGCCAAAAGTTTTATTCTTTTATGTTTTTTTTTGCGATCTATTATTCTTTTATGTTGAGAGAG
AATTTTTTAGA-AAAAAATATAGATGTACTATTCTTTTATGAGAAATCTTGATAGTGAAGCTGGGTGTAAATGCCAAAAG
TTTTGCGAGAAGTCCGGTTAATGT--TGGATTAATCACATAAGTGTCAAAGTATATAAATAGCAAGCGAGAGCGATAAAT
ATTTCCTGAAATGGTAATTTTGTTACCTTCATGTTAGAAAAAGTTGCTCCCATAATTCGGTTTCTGCGCTTCATCCTCAT
GTCATTTTTTTTGACGTAACCTCATGTCATTTTGGTGGTATTGTGAGCCTCTAGTATACCATCCTTTTCATTAAGAAGTC
TATGGATAAAGCCAGAAACCTAAAAGGGATTCTTTCCTGTTTGGAAAGCCTTTATGGTATGAAAACCAGCTTCCATAAAA
GTGACATATTGACTATTAATGTGGATGCTGAGCAGGCAAACTTCTATGCTCATTTTTTTCTGCTGTAAAATGGTTCATTT
CCTTTCAAAAATTTGGGGGTTCCCCTACATTTTAACAAGCTGAAAATAGAGGATCTGCAGCATGTCATGGACAGATTCAT
TAAGAATATATCTAGATGACTAGGTTAAAAATATGTCTTATAGGGGCAAACCCACC-TTTCTACGATCATGTATCACCAG
TATACCTGCTTACTTGATATGTCTATGCTTAAATTTCCAAAATGGGTTATCAATTCTATTACTCCCAAATGTATCGC---
--TTGCGGTAATATAGGTGACTCCCGTCAATACCATTTGG-----TGGGGTTTGGTTTCTAGGAATAAATTGTTTGGTAG
CTTACGGTTTCCTAATCTTA
>chr1D_1
GCTAAACTGCAATGTTATGATAACCAGCCTGCTAAGTTTCTTCGAAGGCGCGCGGGGCTGGGGCTGTCACAGACAAACAT
CATATTGCAATAATGCAAGTGCCTCTGAAGCACACG----ACAAGTTGCTCGCCACTCCTTGACCTGTAAAATTGTATTC
GTAGAGAAGAGTATTGTGCACGTACGGCCGATCAGAACAGAGCGTGCAACGCATCTCTGCATCCAACCTGTCGATCATCT
GGCCGCGCAACATTCTCCGATCTCTAGCGCACGTGTCATTATTGATGGAAGTAGTAGTATCAACAGAAGCCAGAAGGACC
---AGCGCATAAACACGAGAACCGCCCGGAAGTTGCACCCGCTGTGCT----GCC-GATGCGAGATTTGCTGGAATCAGA
TCGCGTTTGATGCTGCATGCTCTACCAGCTTCAGGTAGCAGCTCGCGGCTTCCTTACC------AGCTTCCACTGTCACC
CGGCGCTGCTGGCCAAGGCCTGGCTG------------------------------------------------------
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---------------------------------------AAAACCATTTTACTAGCAGAAGAACATGGACCTAGCCAGAA
GAGGCAAGTATCTTCTCTCGTAGTA---AAACATTCAACTGGCTGCCCTGCCGATCGGCATATGTTGGATTTTCACGTGG
CCTGACATCTGCCACTAGTTAATTTGCATCGCCCATCGGTCAATCACGGCCAGCATCCACACGGAGCGC----------C
CTGCTTCAAGGAACCTCACGTTTTCCACCCGTCCCGTCGCGCGCCGGGTCAGCGTCACGCACGTAAAGCGGTGCGATGCG
CCCGCGCACCAGATTCCAGATTACCGGTCTCCCGTGGCATCTCGCTCGCTCGCCCGTTCCGTACGAGGGGAAAGGAGAGG
AAGGTGTGAATAGTCAAGCGCGGGGA-GCTCAACGACCAACTCGTCTGCTGCCTTTTGTTTTTGTTCGCTACTGCCCGCA
GGCCCGCGCGTCGCGG---CTTCGTGCCCCGCGACAGGGTCAAGGCAAGCCAACACCACGCACGATTCCGTTCCCTCCCG
TGCCCGCCAT----------TATATGCCCGCCGTCGCCCACCGATGCTTCGTCGTCAACCAGTC-----TCTCCTCCCCC
ATCTCTTCTTCAACTCCCCTGACCCTCACACCGGAATTCACAGGCTCAACCAAGAAAGCAACCAGTCTGCATCGAGAGGA
TCGTTGCCAGTTCTTCCGATTCTTGCTCTTGCATTGCGCAGTCCATCTTCGATCGCCGCGGAGC-----TGGTGTCACCG
ATGGCTTCAGCACAGCCGTGGAAGTCTATGTTCTGCTGCGTCGGAGCGGGGGCGGCCGTG---------------GACGA
AGAAGGGCCGTCGCCGTCTTCCACGCCGAGGCGGAGGAGAGGGGAGCGGAGGACGCTGCTGCCGTCGTCGTCCGCGTCGA
CGGCGTCCCGGGTCTCCCTGTCCAGCCTGGGGTCGACGGGCACGCTGACGCCGGAGGACCTCTCGCTGACGCTGTCCGGC
TCCAACCTGCACGCCTTCACCTACGCCGAGCTCAAGGCGGCCACCGCCGGCTTCTCCCGCTCCAGGTACCTCGGCTGCGG
CGGCTTCGGGCCCGTGTACAAGGGCCAGCTCGCCGCCGAGCTCCGGCCGGGCCTGGAGGCGCAGACGGTCGCCGTCAAGT
ACCTCGACCTCGACTCCAGCTCGCAGGGCCATAACGAGTGGCTGGTAAGTCGACCCACTGACTCCACCATTGTTG---TT
GCACGTACGGATGCATGATCTGTCAAATAAAATACCTCCATTATTGCGCCAACTAACTTCTCGATCC---GATTGGTTC-
TGCAGGCGGAGGTGTTCTTCCTTGGGCAACTGAGGCACAGGAACCTGGTGAAGCTGGTCGGCTACTGCTATGAGGAGGAG
CACCGGATGCTGGCGTACGAATTCATGGGCACCGGCAGCCTGGAGAAGCACCTCTTCAGAAGCATCGACGGCCCCATGCC
GTGGATGACGAGGATGAAGATCGCCGTCGGCGCCGCCAAGGGCCTCGCCTTCCTCCACGGCGCCGACACGCCGGTCATCT
TCCGCGACCTCAAGGCGTCCAACATCTTGCTCGACTCGGTGAGTCAACTCAACTGCCCGATTAATCCAATTATCTCATCA
TTTTTGAGACTTGACCACGAGTTGGCGATAGAGCAACTTGTGGACGGATGAATGTCAAAGTCTGGCACCCGTTTTTTTTT
TGACGAAAAACAGCATTGTGCTGATTTCATTCATTAAGATAGGATGAGACACCCCAAGAAATACAGGTCAAGGTTTGCTA
GGGTTTGCTGGCTTCGCTGGAAAAGCCAGCGGCGCCATGATTAGGACTTGGAATTGGAAGGTTCCTGGATGCCCATTTCT
CACATAAATCCTACTACTCACAATCAATAAATCTGTACCCACCCGTGCCATAATGTATGATTATGTCAGTATCAAAGCAA
CAGCCTGACAGATACAGCTTAGCACGATAGAAACGTTGTCAGGTTA----CATGGATATATC--------TGTGTTTGTC
ACATGTTATCTTTGCCTAACCTAATTTGCTTCTTGCATTTCAGGACTATACCGCCAAGCTGTCCGACTTCGGCCTCGCCA
AGGATGGCCCCAACGGCGACGCCACCCATGTCACGACACGTATCATGGGTACACATGGATATGCCGCACCAGAGTACATC
ATGACGGGGCATCTGACCGCTAAGAGCGACGTTTATAGCTTCGGCGTGGTGCTCCTCGAGCTATTATCGGGTCGGCGGTC
CATTGACCGTGCTCGGCGTTCCAGGGAGCAAAGCTTGGTTGACTATGCCAGACCATACCTCAAGAAGCAGGACAAGCTGC
ACCGGGTCATGGATCCGGCTTTGGAATGCCAATACTCGTCTCAGGGGGCTGAACTGGCTGCACGAGTAGCGTACAAATGC
TTGAGCCAAAACTCAAAGTTGAGGCCCACCATGAAAGAGGTCGTTCAGGCCCTAGAGCCCATACTCAAGATGGACGACTA
CCTACAAGTGGGTACATTCGTGTTCACAGTCGTAGTGGAAAATACTGATAAAAGCGTCGAGAACAAAGGAAAGCTTATTG
ATGACGAGTGGAAGGCTGACATGAAGGTTGAGAAGATTGTAGAGGACAAGCACCAGAGCCACCAAGATCGACACCGGCAA
AAGTTCCCAAACTCAACGATACACGCTGACATTTTGCTGCAACGGGATGGTGCCATCGGGCCGTATACCACTGCGCTACA
ACGTCACCGAAGAGCATCAAGTTACACTGAGGAAAGGGGTGCATAGTGTTGATCATCACAGAGCTTAGTTAGGACCGTTG
TTAAGGAGTAAGAGTATCAAAATGGAAGATTGTACATATTTGAACTAGATCCTGTAGGTGTGTAACACAAGTCACGGATC
ACCAAATTGGTTTG--------------------------------------------------------GTTGAGAGAG
AATTTTTTAGA-AAAAAATATAGATGTATTATTCTTTTATGAGAAATCTTGATAGTGAAGTTGGGTGTAAATGCCAAAAG
TTTTGTGAGAAGTCCGGTTAATGTATTGGATTAATCAGATAAGTGTCAAAGTATATAAATAGCAAGCGAGAATGATAAAT
GTTTTCTGAAATGGTAATTTTGTTACCTTCATGTTAGAAAAAGTTGCTCCCATAATCCGGTTTCTGCGCTTTGTCCTCAT
GTCATTTTTTTTGACGTAACCTCATGTCATTTTGGTGGTATTGTGAGCCTCTAGTATACCATCCTTTTCATTGAGAAGTC
TATGGATAAAGCCAGAAACCTAAAAGGGATTCTTTCCTGTTTGGAAAGCCTTTATGGTATGAAAATCAGTTTCCATAAAA
GTGACATATTGACTATTAATGTGGATGCTGAGCAGGCAAACTTCTATGCTCATTTTTTTCTGCTGTAAAATGGTTCATTT
CCTTTCAAGAATTTGGGGGTTCCCCTACATTTTAACAAGCTGAAAATAGAGGATCTGCAGCATGTCATGGACAGATTCAT
TAAGAATATATCTAGATGACTAGGTTAAAAATATGTCTTATAGGGGCAAATCCACC-TTTCTTCGATCATGTATCACCAG
TATATCTGCTTACTT-----------------------------------------------------------------
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--------------------
>chr1A_128
GCTGCGA-------------------------------------------------------------------------
--------------------------------------------------------TCCTTGACCTGTAATAAGA---TC
CTGGAAAAGAGTATTGTGCACGTACGGCGGATCGGACG-GAGCGTGCAACGCATCTCTGCATCCAACCTGTCGCTCATCT
GGCCGCTCAACATTCTCCGATCTCTAGCGCACGTGTCATTATTCATGGAAGGATTAACC-------------GAACGACC
---AGCGCATAAGCACGAGAACCCGCCGGAAGTTGCACCCGCTGTGCT----GTGGGAGGCGAGATTTGCTGGGATCAGA
TCGCGTTTGATGCTGCATGCTCTACCAGCTTCAGGTAGCACCTCGTGGCTTTGCAAGTGGGAGTAGCTTCCACTATCACC
CAGCGCTCCGTTTCGAAAAAAACTATCACCCAGCGTTGCTTTTTTTTTTTCAGGCTAATAGAGAGCTTTATTGATTAAAG
GTATTCGCTGGGCAGTCCGCCAACAGGGCACTGACCAGGAAACCGGGAGTATTATCGAGCCAACTATCGGTCCTGTCAAT
CGTGCAAGCATGCTTAGCACAGATGTGAGCAGGCTCATTAGCTGATCTTACAACATGACAAATATCAAAAGATGAAAAAC
AAGTGGTAAGCTCTCCAATATCTAACAAAATAGGAGCCACGACCGAACGGGAGTCGTGTCGAGTAGCCCAGAGGTTTACA
ACCTCCAGAGAGTCCGTCTCCATGATGACGTTTGAGAAGCCCCTTAGTTTAGCGAAGATCACGCCGCCCCTCACCGCCAA
AGCTTCAGCTATGAGAGGATCTGTTACCCCAGGATAGGGCTTGCTCCACGCTCCTTGAAAGGCGGTCGGGGAGCGAGCGA
CGCCTCCTGCACCACCCTTGCCGCCATCAAGATGTATGGCTGCGTCTGTGTTGATCTTGACGAATCCGGGGTCTGGAGGG
CGCCAACCGTGTCCCGGCAACATTAGCGCCTGCTGCCGGGGAATGTCCAGGAGTGCTAGTGTCTCCCTCGTGCGGCAGAC
GAGGTCGCCGGATCAAGCTTGTCCTCGCCATGAGTCAGCTTGTTCCTTGAGTGCCATATAGACCACATCATCGAGACTAG
TATCGATCGATCCCTGTTGGTGAGTGTGTCGCTGTAGATGACATCCTTTGCCCAGGTGAGGGGTTGGAGTGTTAGCATGT
CGAAGTCGAACAGCTGCTCGGCCTCTTCCCAAAACTGCTTTGCACGGCTGCACCTAAGTAGAGCGTGTTCCAAGTCCTCA
TCATAAGCCAATCAAAGCTTGCAAGTTCCTTGTTCTCGCAGGTGTCGATGTAGCAAAGTGCATTCATCAGGTAAAATGCC
TCTCAGCACCCGCCAAAAAAAAACCCTGACCTTGGGCAGCACCTTCAGTTTCCACAGCTTGTCCCATACCTGTTGCTCAT
TGATTGGAGTTTCGGTATCCTGCCCTTCCTCTTGAGCTTGACGCTCGTTGCGAGTCACTAGAGCTCGGTACGCCAATTTA
ACGGTATAGTTGCCTGAAACATCATGTGCCCATGCTAAAAAGTCCTTGCCACCGCCGGTTCTCAAAGGGATGTTCAATAT
TGCTGCCGCATCGGATGGCTGGAATGACTCTTGAATAAGATCCCGCTGCCATGTCCAGTTGTCCGTATCAATAAGATCAC
TGACCTTTGACACCAAATCTGCTATCCTGAGAGTGGGAATAAAGTTGGCTATGCCGGGCACCCATGGGTCAGACCACGCA
GATATAGAAGATCCGTCGCCGACCCGCATAATGAGCCCCATTCGCAGCGCTTCCCGCCCGGCGATAATCGCCCTCCAAGT
CGACGAGGAGGAGCCCAGTGTTGAAGCCTGCATGAAATCAGAATTGGGGAAATATTTTCCTTTCAAAACTCGGTCACGCA
GGGTGTTAGGATTTGTCATAAGCCGCCAGCCTTGTTTGCCAAGCATTGCTAAGTTGAAAAGATGGAGGTCCCGAAAACCC
ATTCCTCCTTTGCACTTAGGTGTTGCAAGCTTCTTCCATGATATCCAGTGTAAAGCACGTTTGTCAATGGAGCTACTCCA
TCAGAACTTGGCCATGCAAGTCGTTAAGCTCTTGCATACTTTCTTTGTCAGCAGAAACACACTCATGCTAAATGTGGGGA
TGGCTTGCGCGATGGATTTAATCAGAGTTTCCCTTCCCGCACACGCAAACAATCTCTCTGACCATCCCTGCATGCAACTT
CTTGATCTTTCCCTTATATGTTCGAATGTGCCGCTGGTGATCCTGCCCACGGCTGTTGGGAGACCAAGGTAATGCTCGCT
AAAAGTTTCAGCATGTACATCAAGGGTGGTTTTGATAAGCTGTCGTTGATCAAGTGGGGTGTTTGGACTGAAGAAGATGG
CACTCTTCTCTCTATTGACACACTGACCAGAGGCACTACCATAGATGCGCAAAATCGCATTCAATCTGTTCGCACTCTCA
GCATCAGCCTTTCTGAACATGAGGCTATCATCTGCGAAGAGCAGATGGTTTACCCAAGGGGCGTGATAGTTGACTCGAAT
CCCTCTATCCACTGTGCCATAATGTTTGAGCAAGGAAGAAAATCCTTCTGCACAGAGTAGAAAAAGAAATGGCGACATCG
GGCAGCCCTGCCGCAAACCCCGAGATGGGTTGAAGAAAGGCAATAGTTCTCCATTAACTCGTACTGAGAAACACACTGAT
GTTACACACTTCATAACAAGTCTGACAAGGTCTGCGCCAAAACCAATCTTGGATAGTATAGCTTCCAAATAACTCCATTC
AACTCGGTCGTAAGTTTTCATCATATCAAGTTTGATTGCGCAAGAGTAATTCTTCCCCTTCCTCCTTCGCCGCCTGGCAT
GAATGCTTTCGAACGCAACCAAAACATTGTCAGTAATGAGGCGTCCGAGGACGAAAGCGCTTTGCTCCTCGTTAATGAGC
TCATCCATGAAATCCCGCATCCTATTGATGATGACCTTGACAGCCAATTTGTACAGAACCAGGCATAACGAGATAGGTCG
ATAATGTGAGATGGTTTGTGGGTTACGCACCTTAGGGAAAAAACCATTTTACTAGCAGAAGAACATGGACGTAGCCAGAA
GAGGCAATTATCTTCTCTCGTACTACTAAAACATTCAACCGGCTGCCT----GATCGGCATATGTTGGGTTTTCACGTGG
TCTGACACCTGCCACTAGTTAATTTGCATCGCCAATCGGTCAATCACGGCCAGCATCGACACGGAGCGCGCATATGGCCC
CTGCTTCAAGCAACCTCACGTTTTCCACCCGTCCCGTCGCGCGCCGGGTCAGCGTCACGCACGTAAAGCGGTGTGATGCG
CCCTCGCACCAGATTCCAGATTACCGGTCTCCCGTGGCATCTCCCTTGCTCGCCCGTTCCGTACGAGGGGAAGAGGAAGG
AAGGCGGGAATAGTCAAGCCCCCGGAAGCTCAACG----ACTCGTCTGC---------TTCTTGTTTGCTACTGCCCGCG
CGCC--------GCGG---CTTCGTGCCCCGCGACAGGGTCAAGGCAAGCCAACAC----CACGATTCCGTTCCGTTCCG
TTCCACCACCACGGCCATTATATATACCCGCCGTCGCCCACCGATGCTTCGTCGTCAACCAGTC-----TCTTCTCTCCC
ATCTCCTCTTCAACTCCCCAGCCCCTCACAGCTCG-------------ACCAAGAAACCAACCAATCTGCATCGCCAAGA
TCGTTGTCAGCTCTTCGAT-------TCTTGCATTGCGCGGTCCATCTTCGATCGCCGCGGAGCAGGTATCGTATCACCG
ATGGCTTCAGCGCAGCCGTGGAGGTCTATGTTCTGCTGCGTCGGAGGCGCGGCGGCGGGGGCGGCCA------CCGACGA
CGAAGGGCCGTCGCCGTCTTCCACGCCGAGGCGGAGGAGAGGGGAGCGGAGGACGCTGCTGCCGTCGTCGTCCGCGTCGA
CGGCGTCCCGGCTCTCCCTGTCCAGCCTGGGGTCGACGGGCACGCTGACGCCGGAGGACCTCTCGCTGACGCTCTCCGGC
TCCAACCTGCACGCCTTCACCTACGCCGAGCTCAGGGCGGCCACCGCCGGCTTCTCCCGCTCCAGGTACCTCGGCTGCGG
CGGCTTCGGGCCCGTGTATAAGGGCCAGCTCGCCGCTGAGCTCCGGCCGGGCCTGGAGGCGCAGACGGTCGCCGTCAAGT
ACCTCGACCTCGACTCCAGCTCGCAGGGCCATAACGAGTGGCTGGTAAGTCGACCCACTGACTCCACCATTGTTG---TT
GCACGTACGGATGCATGAGCTGTCGAATAAAATACCTCCATTATTGCGCCAACTAACTTCTCCAT-----GATTGATTC-
TGCAGGCGGAGGTGTTCTTCCTTGGGCAACTGAGGCACAGGAACCTGGTGAAGCTCGTCGGGTACTGCTACGAGGAGGAG
CACCGGATGCTGGCCTACGAGTACATGGGCACCGCCAGCCTGGAGAAGCACCTCTTCAGAAGCATCGACGGCCCCATGCC
GTGGATGACGAGGATGAAGATCGCCGTCGGCGCCGCCAAGGGCCTCGCCTTCCTCCACGGCGCCGACACGCCGGTCATCT
TCCGCGACCTCAAGGCGTCCAACATCTTGCTCGACTCGGTGAGTCAACT-----GCACGATCAATCGAACCATCTCACCA
TTTTCTAGCCTTGACCACGAGTTGTCGATAGATCCACCTGTGGACGGCTGAATGTCAAAGTCTGGCACCCGTTTCAAACA
T-------------------------------------------------------------------------------
--GTTTGCTGGCTTCGCTGGAAAAGCCAGCGGCGCCATGATTGGGACTTGGAATAGGAAGGTTCCTGGATGCCCATTTGT
CACATAAATCCTACTACTCACAATCAATAAATCTGTACCCACCCGTGCCATAATGTATGATTATGTCAGTATCAGAGCAA
CAGCCTGACAGATACAGCTTAGCACGATAGAAACGTTGTCATGTTA----CACGGATATATC--------TGTGTTTGTC
ACAGGTTATCTTTGCCTAACCTAATTTGCTTCTTGCATTTCAGGACTATACCGCCAAGCTGTCCGACTTCGGCCTGGCCA
AGGATGGGCCCAACGGCGACGCCACCCATGTCACGACACGTATCATGGGGACACATGGATATGCCGCACCAGAGTACATC
ATGACGGGGCATCTAACCGCTAAGAGCGACGTTTATAGCTTCGGCGTGGTGCTCCTTGAGCTGTTATCGGGTCGGCGGTC
CATTGACCGTGCTCGACGTTCCAGGGAGCAAAGCTTGGTTGACTATGCCAGACCTTACCTCAAGAAGCAGGACAAGCTGC
ATCGGGTCATGGATCCGGCTTTGGAATGCCAGTACTCGTGTCAGGGGGCCGAACTGGCTGCACGTGTAGCGTACAAATGC
TTGAGCCAAAACTCAAAGTTGAGGCCCACCATGAAAGAGGTCGTTCAGGCCCTAGAGCCCATACTGAAGATGGATGACTA
CCTACAAGTGGGTCCATTCGTGTTCACAGTCGTAGTGGAAAATACCGATAGAAACGTTGAGAAGAAAGAAAAGCTTATTG
ATGATGAGTGGAAGGCTGACATGAAGGTTGAGAAGATTGTAGAGGACAAGCACCAGAGCCACCAAGATCGACACCGGCAA
AAGTTCCCAAACTCAATGATACACGCCGACATTTTGCTGCAACGGGATGGTGCCATCGGGCCGTATACCACTGCGCTACA
ACGTCACCGAAGAGCATCAAGTTACACCGAGGAAAGGGGTGCATAGTGTTGATCATCACAGAGCTTAGTTAGGACTGTTG
TAAAGGAGTAAGAGTAGCAAAATGGAAGATTGTACATATTTGAGCTAGATCCAATAGGGGCGTAACACAAGTCACAGATC
ACCAAATTGGTTTG--------------------------------------------------------GTTGAGAGAG
ATTTTTTTTTTGAAAAAATATAGATGTATTATTCTTTTATGAGAAATCTTGATAGTGAAGCTTGGTGTAAATGCCAAAAG
TTTTGCGAGAAGTCCGGTTAATGTATTGGATTAAT-ACATAAGTGTCAAAGTATATAAATAGCAAGCGAGAATGATAAAT
GTATTCTGAAATGGTGTTTTTGTTACCTTCATGTTAGAAAAGGTTGCTCCCATAATCCAGTTTCTGCGCTTTGCTCTCAT
GTC-TTTTTTTTGACGCAACCTCATGTCATTTTGGTGGCATTGTGAGCTTCTAGTATACCATCCATTTCATTGAGAAGTC
TATGGATAAAGCCACAAACCTAAAAGGGATTCTTTCCTATTTGGAAAGCCTTTATGGTATGAAAATCAGCTTCCATAAAA
GTGACATATTGACTATTAATGTGGATGTTGAGGAGGCAAACTTCTATGCTCATTTTTTTTTGCTATAAAATGGTTAATTA
CCTTTCAAGAATTTGGGGGTTCCACTACATTTTAACAAGCTGAAAATAGAGGATCTCCAGCATGTCATGGACAGATTCAT
TAAGAATATATCTAGATGACTAGGTTAAAAATATGTATTATAGGGGCAAACACACCTTTTTTTCGATCATGTATCACCAG
TATACCTGCTTACTTGATATGTCTATGCTTAAATTTCCAAAATGGGTTATCAATTCCATTAGTCCCAAATGTATCATTTC
TTTTGGGGTAATATAGGTGTCTCCCGTCAATACCATTTGGCTGACTGGGGTTTGGTTTCTAGGAATAAATTGTTTGGTAG
CTTAGGGTTTCCTAAGCTTA
>chr5D_1376
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-----------------------AGCCTGAGCTCGTCGGGGACGCTGTCCCCGGAGGACCTGTCGATCACGCTGTCCGGG
TCCAACCTGCACGCCTTCACCTACGCCGAGCTCCGCGCCGCGACCGGGAGCTTCTCGCGCACCCACTACCTCGGCTGCGG
CGGCTTCGGCCCGGTCTACAAGGGCGCCGTCGACGACAAGCTCCGCCCCGGGCTGGCCGCGCAGCCCGTCGCCGTCAAGT
ACCTCGACCTGGACTGCGGCACGCAGGGCCACAAGGAGTGGCTGGTGAGTGCCCAACAGAGTGCAA-------TGCACTC
TCAAGCACGATCAGATGCTTGGCAGATCAATTTCGAAGC-CTGGTCGATGAACAGCTAGCTCATTATGTGGGTTGTTCT-
TGCAGGCTGAGGTATTCTTTCTTGGGCAACTGAGGCACAAGAACCTGGTGAAATTGATCGGGTACTGCTACGAGGACGAG
CACCGGATGCTCGTGTACGAGTTCATGAACGCCGGGAGCCTGGAGACGCACCTCTTCAAAAG------------------
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>chr5B_1376
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-----------------------AGCCTGAGCTCGTCGGGGACGCTGTCGCCGGAGGACCTGTCCATCACGCTGTCCGGG
TCCAACCTGTACGCCTTCACCTACGCCGAGCTCCGCGCCGCGACCGGGAGCTTCTCGCGCGCCAACTACCTCGGCTGCGG
CGGCTTCGGACCGGTCTACAAGGGCGCGGTCGACGACAAGCTCCGCCCCGGGCTGGCCGCGCAGCCCGTCGCCGTCAAGT
ACCTCGACCTGGACTGCGGCACGCAGGGACACAAGGAGTGGCTGGTGAGGGCGGATCAGAGTGCAA-------TGCACGC
CCCAGCACGCTCAGATGCTCGCGTGATTAATT--CGGTGTCTGCTCGATGAACACCTAGCTTATCATGTGGGTTGTTCTT
TGTAGGCTGAGGTTTTCTTCCTTGGGCAACTGAGGCACAAGAACCTGGTGAAACTGATCGGCTACTGCTACGAGGACGAG
CACCGGATGCTGGTCTACGAGTTCATGAGCGGCGAGAGCCTGGAGAAGCACCTCTTCA----------------------
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--------------------
>SNPs
--S-----------------------SSS-------------S--------S-S---S----------------------
----S--------------------S--------S-SSSS-------------S-----------------------S--
-----------------------------------S---------------------S----------------------
--S-S-----S-------------SSS-S------------------S------S--------------------SS--S
SSS----------------------------------------S----SSSS-----------------------S----
-SSS-S--------------------------------------------------------------------------
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---------------------------------------------------------------------------S----
------------S------------------------S---S-------------------------S------------
-----------S---------------------S----------------------------------------------
-S------------------------------S-------------------------------------------S---
---S-------------------------------------------S--------------------------------
------------------------S--------------------------------------------------S----
----------------SSS--------------------------------------S----------------------
----------------------------------------------------------------SSSSS-----SS----
-----------------S--S---------------S---------------------------S-S-------------
-------------------S----------------S----------------SS--------S----------------
---------S--S--S-------------------------------S--S-S---------S---SSSSSSS-------
-------------------------------S----S--------SS-S---S---------------------------
--------S-------------------------------------------------------------------S--S
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----S---------------------------------------------------------------------------
------------------------------S-------------------------------------------------
--------------------------------------------------------------------------------
-----S-----------------------S-----------------------S--------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------S-------------------------------------S---------------
SSSS-SS-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------S---------------------------SSSSS---------------------------------
------------------------------S---------------SSSS----S-------SSSSSSSS----------
---S---------------------S-------------------------------------S----------------
----S--------------------S------------------------------------------------------
-----------S--------S-----------S-----------------------------------------------
--------------------S------------------S-----------S----------------------------
----------------------------------------S-----------------S--------S------------
--------------------------------------------------------------------------------
------------------------------------------------S----------S--S-----------------
S---------------------------------------------------S-----------------S---------
--------------------------------------------------------------S--------S--------
-----------------------------------------------------------------------------S--
-------------------------------------------------------------------------------S
SSS--SS---S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------
----------------------------S---------------------------------------------------
-----------------------------------------------------------------------SS-------
S---S---------------------------------------------------S--------------SS-------
------------------------------------------------------------------------S-------
-----------------------------------------------------------------S--------------
--------------------------------------------------------------------------------
--------S-----------------------------------------------------------------------
--------------------------------------------------------------S-----------------
--------------------------------------------------------S----S-------------SS---
-----S-------------S------------------------------------------------------------
----S----------S----
>forward_3545
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-----GTGAATAGTCAAGCCCGGGA-------------------------------------------------------
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>reverse_5588
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-------------------------------------------------------------------GGCGTACAAATGC
TTGAGCC-------------------------------------------------------------------------
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>forward_3746
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----------------------------------------------CTTCGTCGTCAACCAGTCGA--------------
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>reverse_5761
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GTGACGAGTGGAAGGCTGAC------------------------------------------------------------
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>forward_5372
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------------------------------------------------------------------------AGTACATC
ATGACGGGGCAC--------------------------------------------------------------------
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>reverse_6862
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-------------------------------------------------------------CTCCCAAATGTATCGCTTG
CG------------------------------------------------------------------------------
--------------------
