>input_sequence_37385
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----------------------------------------------------------ATGACGGTGGGGATGATCAACG
CGAACCCGGTGGTGCACGAGCGGCCGGAGCGCGCCGCCCACCCCGCGCACGCGGCGCTCGACGCGCTCGACGTCTTCGGT
AACGGAAGCG-------------CCCGGATCCCCTACTCGGTTTCCTCTTTCGTTTTCTCCTCCCTCC----ATTGATTG
GATTGG---------------CTTCACCGACCGAC---GGGGAGCTGACTGATTTGGGTG----CGTGCAGATACGGTGC
GGGACATCAAGGACCCGGAGCACCCCTACTCGCTGGAGCAGCTCAGC---GTGCTCTCCCAGGAGTCCGTCTCCGTCGAC
GACAAGCTCGG--------CCACATCCAGTACGTATGCCTGCAAGAATGTGCTGCTCAAGTTTCCTTCTGATTGTCAGGG
TACCAAATTGC--------CAAATTAGCAGGGGCTGGGACTAGGAGGTG---GTAGTACTTGGTGTTAATTTCCGA----
--------TAATTTCCAATGTTCATTGCTAC--TCCTGCAGTG-------------TCCTGCACCCGTTCCCCCATC---
--------------------AGCCCCTTCCAGTATTAGAAGCCAGAATCATTGTGGTTTTGT--------AGTGGAAATG
TAGAACC---CGTGCCCGGTTCACGCAGTCCGGCTAGCCAGATTTGGATTTACGCCCGTGACAAGATGATTATTATCACA
GATGATGAGCTACCATATATGATCCTTTCTCGTTTAT-------------------------ATCTCAGTGGAGATTCAG
AGCGTGATCTTGAAAGCACGCTGCATACACAAGTGCAGCGCTCACTGCTTTT-ATCAAAAACAAATTAAAATAAAAAAAA
GTATGCCTC---TGCTTGCTGCTTGGGATTTGGTTTCCCATTAGGTTGCTCATCCTTGTATATTA---TCTTCACTCTGT
ATACGGGATCTGCGAGCTTCAGAATGCACTTACTTGTTGCAAACGAAGCATC----------CTCATTGTACAGTAGAGT
A--CAGTCTGTTCATACAAAATCTGTTTTGGTTTCATGCAAGCAGTCAAGAGCTAGCATCCTGCTTAAACTTTTGGGGGT
CCCTGTTCACACCTTGCAATTGCTT-GCAGGATAACCTTCACCCCAACTGTGCAACACTGCACTATGGCCACAGTGATTG
GCCTGTGCCTCAGGCTTAAGTTGATGCAAAACTTTCCTCCGCATTTCAAGGTGCTTAGCATGTTTCTATATGGATCCCTT
TCTATATTCATCGGGTTCTGATTAAGTTAACTAGTTGAGATGCTTTATAAATTACATTATGTTTTATGTAGCTTACGTGC
CATCAGCAGCCATTATCCAATGTTTTAGAGTTTACATGCATGTTCAATTTAGCAATACTTTTCTTTTCCTCTGTCTCTGT
TCGGTGAAATATGGGATAGATGGAATGTCACGACGTTAACTATTACAAACGTATTG-TTTGTTCATCCATCAAGACACTT
GCCACACATA---TACACATGCGCATGTTTGCAAATTCGTAAACATTGTGTGTATCAAGAGAAGCAGACAGGCAGCACAA
GCCATACACTGTAAATTGTGTGCATGTAGAAGCTCCTACAAT------CTATAAGAGTGTTAATAAACCTACTGAACCAT
TTATGATGGGGTTTTTTATCTGCCTCAGAGGAACCATAAATCATCTC-GATTCTTTTAAACTTTTATTTTCTGTGGAATA
CTATTCATGGATCTACAAGTTATCTACTCAGATGGTTTGTCTTCAGTAGCACTGTT-AAGATTTCGAGCTAGCTATAATG
CAAACGAACTCCACCAAAAGAAAATGCC------------------CCTCTTTCATGATGATTCTTATGGAATTATTTTA
---------------TTCAGTAGTACTATGACTCCTTTCTTTCTTG---TGTATGAATGTGCAGATTGACATAAAAGTTG
CTCCAGGATCTCTTGCTAATGAAGAATCAGGTGCGTAAGATGACAGA---TATTCTAACTCATGGCTAA-----------
---------------------------CTCATCATGGGGCAGTATTATCCGTGAAAATATCCAATGCACCCCTTTTACTT
TGTACCTGCTGAACTCGGCAAAACGAGAACGGCAGCTCTATAGCACAATTGCGTTTGAACAGTGGTA--------TGTAT
GACG----TTAACATGCTGAATTGACAGTAAACAAACAGCTGAACGACAAGGAGAGAGTCGCGGCGGCCTTGGAGAACCC
CAACCTCCGGCAGTTGGTGGACGATTGCCTCTGCTCAGATCATCCATCCTCATATTAG----------------------
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>chr5D_1_TraesCS5D01G418800
CGCGTTCCATGAGACGATGGTCCGGTCCGGCATGCTCTCGAACAAGGACAAAGCAAGGTCCATCCTCCCCAGACGCGCGT
CGAGCGACACCATGGCGTTCCAGCTCGACACGCTCCGCGCCGGCATCTGTTCGAACACGGCCCTCGCCGTCTCGGCGTCC
CCGCACTTGCCGTACATGTTGAGCACCGAGTTAGCCACAGGCACGCAGCCGCCCAGGCCGAGCTTGACGACGAAGGAGTG
CACCCTCCGCCCGGCCCCGCCGGCCTCCGCGGCCGCGCACGACGAGAGCACGTTGGTGAGCGTGAACTGCGTCGGCGCCA
GCCCGTCCCCGACCATGTCCAGGAACGCCTCGACGGCCTCCCCGAAGCGGCGGGCGCGGTTGAGCCCCACGACCATGACG
GTCCACGACACGGCGTCGCGCTCGGGCATTTCCGCGAACACGGCGCGCGCGTCGGCCAGGCGGCCCGACTTGGCGTAGGT
CGACAGCAGCGAGTTCCAGGTGAACACGTTCCGCTGCGCCGCGGGGACCTCGTCGAACAGGCGCCGCGCCTCCCGGAGGC
CGCCGG------------CGGCGGCGGCGTAGTAGGAGAGGAGGTTGTTGCAGAGGTAGGCGCTGGCGAGGAGGCCGGCC
TTGACGGCGCGCGCGTGGACGGCGCGCCCGGCGCCCGGGTTGGCGGCCGCGCCGCACAGCCGCAGGAGGCGCGCGCAGTG
GTCGGCGGCGGCGGCCAGCGCCGTCCGCGGCGCCCCGGCGTGGA---GCTCCAGTGCGGCGGCATCTCGCATGTCGCGGG
AAAGTCA-GCGGGCTCCCGCGTGCGTGCCAGCGGGCCGCGGCCCACCGGATTAGCAAAA-CCGGCTCGCTCGCTCGCCCC
ACTTTTTCCCCAAACCGAAACTGCTAGCTCGCCAACAGTTTTGTCCTCTTGTCGCGCTCTCTCTCTCTCTCGGCCGACGA
CCGAAGTCGCACGGCAGAGCACCGCCGCGCCGCGCCGAGGAGGGGGAAG-GGGAGGAGATGACGGTGGGGATGATCAACG
CGAACCCGGTGGTGCACGAGCGGCCGGAGCGCGCCGCCCACCCCGCGCACGCGGCGCTCGACGCGCTCGACGTCTTCGGT
AACGGAAGCG-------------CCCGGATCCCCTACTCGGTTTCCTCTTTCGTTTTCTCCTCCCTCC----ATTGATTG
GATTGG---------------CTTCACCGACCGAC---GGGGAGCTGACTGATTTGGGTG----CGTGCAGATACGGTGC
GGGACATCAAGGACCCGGAGCACCCCTACTCGCTGGAGCAGCTCAGC---GTGCTCTCCCAGGAGTCCGTCTCCGTCGAC
GACAAGCTCGG--------CCACATCCAGTACGTATGCCTGCAAGAATGTGCTGCTCAAGTTTCCTTCTGATTGTCAGGG
TACCAAATTGC--------CAAATTAGCAGGGGCTGGGACTAGGAGGTG---GTAGTACTTGGTGTTAATTTCCGA----
--------TAATTTCCAATGTTCATTGCTAC--TCCTGCAGTG-------------TCCTGCACCCGTTCCCCCATC---
--------------------AGCCCCTTCCAGTATTAGAAGCCAGAATCATTGTGGTTTTGT--------AGTGGAAATG
TAGAACC---CGTGCCCGGTTCACGCAGTCCGGCTAGCCAGATTTGGATTTACGCCCGTGACAAGATGATTATTATCACA
GATGATGAGCTACCATATATGATCCTTTCTCGTTTAT-------------------------ATCTCAGTGGAGATTCAG
AGCGTGATCTTGAAAGCACGCTGCATACACAAGTGCAGCGCTCACTGCTTTT-ATCAAAAACAAATTAAAATAAAAAAAA
GTATGCCTC---TGCTTGCTGCTTGGGATTTGGTTTCCCATTAGGTTGCTCATCCTTGTATATTA---TCTTCACTCTGT
ATACGGGATCTGCGAGCTTCAGAATGCACTTACTTGTTGCAAACGAAGCATC----------CTCATTGTACAGTAGAGT
A--CAGTCTGTTCATACAAAATCTGTTTTGGTTTCATGCAAGCAGTCAAGAGCTAGCATCCTGCTTAAACTTTTGGGGGT
CCCTGTTCACACCTTGCAATTGCTT-GCAGGATAACCTTCACCCCAACTGTGCAACACTGCACTATGGCCACAGTGATTG
GCCTGTGCCTCAGGCTTAAGTTGATGCAAAACTTTCCTCCGCATTTCAAGGTGCTTAGCATGTTTCTATATGGATCCCTT
TCTATATTCATCGGGTTCTGATTAAGTTAACTAGTTGAGATGCTTTATAAATTACATTATGTTTTATGTAGCTTACGTGC
CATCAGCAGCCATTATCCAATGTTTTAGAGTTTACATGCATGTTCAATTTAGCAATACTTTTCTTTTCCTCTGTCTCTGT
TCGGTGAAATATGGGATAGATGGAATGTCACGACGTTAACTATTACAAACGTATTG-TTTGTTCATCCATCAAGACACTT
GCCACACATA---TACACATGCGCATGTTTGCAAATTCGTAAACATTGTGTGTATCAAGAGAAGCAGACAGGCAGCACAA
GCCATACACTGTAAATTGTGTGCATGTAGAAGCTCCTACAAT------CTATAAGAGTGTTAATAAACCTACTGAACCAT
TTATGATGGGGTTTTTTATCTGCCTCAGAGGAACCATAAATCATCTC-GATTCTTTTAAACTTTTATTTTCTGTGGAATA
CTATTCATGGATCTACAAGTTATCTACTCAGATGGTTTGTCTTCAGTAGCACTGTT-AAGATTTCGAGCTAGCTATAATG
CAAACGAACTCCACCAAAAGAAAATGCC------------------CCTCTTTCATGATGATTCTTATGGAATTATTTTA
---------------TTCAGTAGTACTATGACTCCTTTCTTTCTTG---TGTATGAATGTGCAGATTGACATAAAAGTTG
CTCCAGGATCTCTTGCTAATGAAGAATCAGGTGCGTAAGATGACAGA---TATTCTAACTCATGGCTAA-----------
---------------------------CTCATCATGGGGCAGTATTATCCGTGAAAATATCCAATGCACCCCTTTTACTT
TGTACCTGCTGAACTCGGCAAAACGAGAACGGCAGCTCTATAGCACAATTGCGTTTGAACAGTGGTA--------TGTAT
GACG----TTAACATGCTGAATTGACAGTAAACAAACAGCTGAACGACAAGGAGAGAGTCGCGGCGGCCTTGGAGAACCC
CAACCTCCGGCAGTTGGTGGACGATTGCCTCTGCTCAGATCATCCATCCTCATATTAGCTCGTCCCTGATGCCTCACAAC
C-------TGTCTGTTGTACAGCAATAATAAGCAGGCATTTTTTGTGT----TTTGCCCAATACTGTACCTGAAATTCGA
GA-AAAGGCACTATAGCTGGTCATGTATGTGCCATTCTTTTGTGTTAGGTGTACGCTGCTACTCCCTGGAATATCAGCAA
TGCTTTTTCTTCTTTCCCGCCAAAAAAAAGCAATGTTTTTTCTTCATGCCTGCATATG-ACCAGTCCTTCAAAGTAGGAG
GGGAA-----------TTGTTTGTTGCAGCAT----GATTTGGTCCTATTTTACTGGTTCTATGTTGATTATCACTAAGT
ATTGTTGTTGGCTATTGCCGTCAGGG-TTTACAAGTGGAATGTGATGTGCAGTTAAGTCGTGCC---TGCCGCGCTTTAG
TTGTGATTACTGATTAGTCTCTCCCTTATCTG---CTGTCATGTTTCTCTTC----TAGACGCATCAT------TTGCTG
GTTATCAACTCTG---AGAAGGGGAGCCGTGTGGTGCTC--------TCTATGTAATG------TACATAGTCTTGGCGA
TGTCAAAA-TGAGGCAAAGTTC-----------TGATGTAATAACGTGTGCGGCTTTGCTT-----GCTGTCCACATGTT
GTATATGCAGCTCTGTCCTTCCGATGAATTTTGTCTGCGCCATGTCGATCAAAACATGACTCGGATGTTTTATCACCTGT
GAACCGGAAGGAACTTGTCCCCGTTGACCCCCGCGTGCCGGTGCCGCCACGACGAGCCCCTCTGGTTGCCTGATGGTTTG
AAT-TTTTTTGCATCACACGA-----CAGGTTGCGTGCGATTTGGTTGCACCACATGGTGTA------------------
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------------------------------TTGTGCTCGACAGCGTGTGCACTCCAGA-ATAGCAGTCGGATGCAATCTG
CTCCGTC-------------------------------------------------------------------------
-----------------------------------------------------------------TTTCATTTTGCTTGC
GGACGAGGCAACTCACGAGTTCAAACAAGATAATGGAATGAATGGTCCTATACCTATGCCTTGCTTGTACTTTCTCCGTT
TCAAGATGTTTGAAGTTCTATGTTTGTGCTAAGCCAAACTTCTTTAAGTT
>chr5A_1
CGCGTTCCATGAGACAATGGTCCGGTCCGGCATGCTCTCGAACAAGGACAAAGCAAGGTCCATCCTCCCCAGACGGGCGT
CGAGCGACACCATGGCGTTCCAGCTCGACACGCTCCGCGCCGGCATCCTCTCAAACACAGCCCTCGCTGTCTCGGCGTCC
CCGCACTTGCCGTACATGTTGAGCACCGAGTTGGCCACGGGCACGCAGCCGCCCAGCCCGAGCTTGACGGCGAAGGAGTG
CACCCTCCTCCCGGCCCCGCCGGCCTCCGCGGCCGCGCACGACGAGAGCACGTTTGTGAGCGTGAACTGCGTCGGCGCCA
GCCTGTCCCCAACCATGTCCAGGAACGCCTCGACGGCCTCCCCGAAGCGGCGGGCGCGGTTGAGCCCCACGACCATGACG
GTCCACGACACGGCGTCGCGCTCGGGCATTTCCGCGAACAGGGCGCGCGCGTCGGCCAGTTGGCCCGACTTGGCGTAGCT
CGACAGCAGCGAGTTCCAGGTGAACACGTTCCGCTGCGCCGCGGGGACCTCGTCGAACAGGCGCCGCGCCTCCCGGAGGC
CGAGGGCGCCGCCTCCTCCGGCGGCGGCGTAGTAGGAGAGGAGGTTGTTGCAGAGGTAGGCGCTGGCGAGGAGGCCGGCC
TTGACGGCGCGCGCGTGGACGGCGCGCCCGGCGCCCGGGTTGGCGGCCGCGCCGCACTGCCGCAGGAGGCGCGCGCAGTG
GTCGGCGGCGGCGGCGAGCGCCGTCCGCGGCGCCCCGGCGTGGA---GCTCCAGGGCGGCGGCATCTCGCATGTCGCGGG
AAAGTTA-GC----------------------GGGCCGCGGCCCACCGGATTAGCAAAA-CCGGCTCGCTCGCCCGAC--
---TTTTCCCCAAACCGAAACTGCTAGCTCGCCAACAGTTTTGTCCTCTTGTCGCTCTGTCTCTCGCTCTCGGCCGACGA
CCGAAGTCGCACGGCAGAGCACCGCCGCGCCGCGCCGGGGAAGAGGGGGA-GGGGGAGATGACGGTGGGGATGATCAACG
CGAACCCGGTGGTGCACGAGCGGCCGGAGCGCGCCGCCCACCCCGCGCACGCGGCGCTCGACGCGCTCGACGTCTTCGGT
AACGGAAGCG-------------CCCGGATCCCCTACTCGGTTTCCTCTTTCGTTTTTTCCTCCCTCCATTGATTGATTG
GATTGG---------------CTTCACCGACGGCGACGGGGGAACTGACTGACTTGGGCGCGTGCGTGCAGATACGGTGC
GGGACATCAAGGACCCGGAGCACCCCTACTCGCTGGAGCAGCTCAGC---GTGCTCTCCCAGGAGTCCGTCTCCGTCGAC
GAGAAGCTCGG--------CCACATCCAGTACGTACGCCTGCAAGACTGTGCTGCTCAAGTTTTCTTCTGATTGTCAGGG
TACCAAATTGC--------CAAATTAGTAGGGGCTGGGACTAGGAGGTACTAGTAGCACTCAGTGTTAATTTCCAA----
--------TAATTTCCAATGTTCATTGCTAC--TCTTGCAGTG-------------TCCTGTAGTACTAGTT--------
-------------------------------GTATTAGCAGCCAGAATCATTGTGGGTTTGT--------AGTGGAAATG
TAGAACC---CGTGCCCGGTTCACGCAGTCCGGCTAGCCAGATTTGGATTTACACCCGTGACAAGATGATTATTATCACA
GATAAT-AGCTACCATATATGATCCTTTCTCGTTTAT-------------------------ATCTCAGTGGAGATTCAG
AGCGTGATCTTGAAAGCACGCTGCATACACAAGTGCAGCGCTCACTGCTTTTTATCAAAAATAAATTAAAGTAAAAAAAA
GTATGCCTC---TCCTTGCTGCTTGGGATTTGGTTTCCCACTAGGTTGCTCATCCTTATATATCA---TCTTCACTCTGT
ATACGGGATCTGCGAGCTTCAGAATGCATTTACGTATTGCAAATGAAACATC----------CTCGTTGTAC-----AGT
A--CAATCTGTTCGTACAAAATCTGTTTTGTTT-CACGCAAGAAGTCAAGAACTATCATCCTGCTTAAACTTTTGGGGAT
CACTGTTCACACCTTACAATTGCTT-GCAGGATAACCTTCACCCCAACTGTGCAACACTGCAGTATGGCCACAGTGATTG
GTCTGTGCCTCAGGCTTAAATTGATGCAAAACTTTCCTCCGCATTACAAGGTGCTTAGCATGTTTCTATATGGATCCCTT
TCTGTGTTCATCAGGTTCTGATTAAGTCAACTAATTGAGATGCTTTATAGATTACATTATGTTTTACGTAGCATACGTGC
CATCAGCAGCCATTATCCAGTGTTTTAGAGTTTACATGCATGCTCAATTAGGCAATATTTTTCTTTTCCTCTGTCTCTGT
TCGGTGAAATATGGGATAGATGGAATGTCACAGAGTTAACTATTACAAACGTATTG-TTTGTTCGTCCATCAAGACACTT
GCCACACATATACTACACATGTGCATGTTTGCAAATTCGTAAACATTGTGTGTATCAAGAGAAGCAGACAGGCAGCACAA
GCCATACACTGTAAATTGTGTGCATGTAGAAACTCCTACAAT------CTATAAGAGCGCTCATAAACCTACTGAACCAT
TTATGATGGGGGG-TTTATCTGCCTCAGAGGAACTATAAATCATCT-TGATTCTTTTGAACTTTTATTTACTGTATAATA
CTATTCATGGATCTACAAGTTATCTGCTCAGATGGTCTGTCTTCAGTAGCACTGTT-AAGATTTCGAGCTAGCTATAATG
CAAACGAACTCCACCAAAAGAAAATGCC------------------CCTCTTTCATAATGATTCTTGTTGAATTATTTTA
---------------TTCAGTAGTACTATGACTCCTTTCTTTCTTG---TGTATGCATGTGCAGATTGACATAAAAGTTG
CTCCAGGATCTCTTGCTAATGAAGAATCAGGTGCGTAAGATGACAGAAGATA-TCTAACTCATGGCTAAGCTTGTGTCTG
TCAATCTGAT----------ATTATAGCTCATCACAGGGCAGTATTATCTGTAAAAATATCCAATGCATCCCTTTTACTT
TGCACCTGCTGAACTCGGCAAAACGAGAACGGCAGCTGTATAGCACAATTGTGTTTGAACAGTGGTACTTTGGTATGTAC
GACG----TTAACATGCTGAATTGGCAGTAAACAAGCAGCTGAACGACAAGGAGAGAGTCGCGGCGGCCTTGGAGAACCC
CAACCTCCGGCAGTTGGTGGACGATTGCCTCTGCTCAGATCACTCATCCTCATATTAGCTCGTCCCTGATGCCTCACAAC
C-------TGTCTGTTGTACAGCAATAATAAGCAGGCATTTT--GTGT----TTTGCCCAATACTGTACCTGATTTTCGA
GAGAAAGACACTATACCTGGTCATGTATGTGCCATTCTTTTCTGCTAGTTGTATGCTACCACTCCCTGGAATATCTGCAA
TGCC--------------------------------TTTTTCTTCATGCCTGCGTATG-ACTAGTCCTTCAAAGTAGGAG
GGGAA-----------TAGTTTGTCGCAGCAT----GATTTGGTCCTATTTTACTGGTTCTCCGTTGATTATCAGTATAT
AA--TTGTTGGCTATTGCCGTCAGGA-TTTACAAGTGGAATGTGATGCGCGGTTAAGTCGTGCCGCCTGCCGTGCTTTGG
TTGTGATTACTGATTAGCCTCTCCCTTATCTGGTGCTGTCATGTTTCTCCTTTGGATAGACGCATCGT------TTGCTG
GTTACCAG-TTTGAGAAGAAGTGGAGCCGTGTGGTGCTC--------TCTCTAATCTACAGTATTATATAGTCTTGGCAA
TGTCAAAAATGAGGCAAAGTTG-----------TGATGTAATGGCGTGTGGGATTTTGCTTGCCGTCCA-----------
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>chr5B_1
CGCGTTCCACGAGACGATGGTCCGGTCCGGCATGCTCTCGAACAAGGACAAAGCAAGGTCCATCCTCCCCAGACGGGCGT
CGAGCGACACCATGGCGTTCCAGCTCGACACGCTCCGTGCCGGCATCCTCTCAAACACGGCCCTCGCTGTCTCGGCGTCC
CCGCACTTGCCGTACATGTTGAGCACCGAGTTGGCCACGGGCACGCAGCCGCCCAGGCCGAGCTTGACCGCGAAGGAGTG
CACCTTCCGCCCGGCCCCGCCGGCCTCCGCGGCCGCGCACGACGAGAGCACGTTGGTGAGCGTGAACTGCGTCGGCGCCA
GCCCGTCCCCGACCATGTCCAGGAACGCCTCGACGGCCTCCCCGAAGCGGCGGGCGCGGTTGAGCCCCACGACCATGACG
GTCCACGACACGGCGTCGCGCTCGGGCATTTCCGCGAACACGGCGCGCACGTCGGCCAGGCGGCTGGACTTGGAGTAGGC
CGACAGCAGCGAGTTCCACGTGAACACGTTCCGCCGCGCCGCGGGGACCTCGTCGAACAGGCGCCGCGCCTCCCGGAGGC
---------CGCCTCCTCCGGCGGCGGCGTAGTAGGAGAGGAGGTTGTTGCAGAGGTAGGCGCTGGCGAGGAGGCCGGCC
TTGACGGCGCGCGCGTGGACGGCGCGCCCGGCGCCCGGGTTGGCGGCCGCGCCGCACAGCCGCAGAAGGCGCGCGCAGTG
GTCGGCG------------GCCGTCCGCGGCGCCCCGGCGGCGTGGGGCTCCAGGGCGGCGGCATCTCGCATGTCGCGGG
AAAGTTAGGC----------------------GGGCCGCGGCCCACCGGATTAGCAAAAACCGGCTCGCTCGCTCGCCCC
ACTTTTTCCCCAAACCGAAACTGCTAGCTCGCCAACACTTTTGTCCTCTTGTCGCTCTCT------CTCTCGGCCGACGA
CCGAAGTCGCACGGCAGAGCACCGCCGC----CGCCGGGGAGGAGGGGGAGGGGGGAGATGACGGTGGGGATGATCAACG
CGAACCCGGTGGTGCACGAGCGGCCGGAGCGCGCCGCCCACCCCGCGCACGCGGCGCTCGACGCGCTCGACGTCTTCGGT
AACGGAAGCACAAACTTCCCCTCCCCGGATCCC----TCGGGTTCCC--------TTTTT---CCTCCATTGATTGATTG
GATTGGATTGGATTGGATTGCCTTCACCGACGGCGACGGGGGGACTGACTGATTTGGGCG----CGTGCAGATACGGTGC
GGGACATCAAGGACCCGGAGCACCCCTACTCGCTGGAGCAGCTCAGC---GTGCTCTCCCAGGAGTCCGTCTCCGTCGAC
GAGAAGCTCGG--------CCACATCCAGTACGTATGCCTGCAAGAATGTGCTCAGC------TTTTCCGATGAGTAGGG
TACCAAGTTATCAGATATTCAGATTAGTAGGGGCTGGGACTGGGAGGC--------------------------------
---AGTGTTAATTTCCAATGGTAATTGCTTTGTTCCAGGCGTG-------------TCATGCACTCATGCCCCTACC---
--------------------ATCCCCTTCCAATCTTAGAAGCCAGAATCATTGAGGGTTCCTACTACTTCAGTCGAAATG
TGGAACGCGGCGTGCGCGGTTCGTACAGTCCGGCTAGCTAGATTTACATTCGTGACA----------------------A
GATAGT-TGCTACCATAAACGATCTACCAAGTCAATTTGACCATTCATATTATACTCCCTACATCTCAGTGGAGATTCAG
AGTATGATCTTGAAGGCACGTTGCGTACAGAAATGGAGGGTTGATTGCTTTT-CTA-------GAATTAAATAGACGAAT
GTCTCATAGGATTGCTTGCTGCTTGGGATGTGATATCCCACTAGCTTTGCCGATCCTTATAGATTATGTCTTTATTCTGT
ATACGGACTCTGCGACCTTCAGGGTGCATTTGCTTACTGCGGGCAAAGCATCCTCTGTTACTCTCGTTGTAC-----AGT
A--CAGTATGCTCGTACAAAATATGTTTTGTTT-CATGCAAGAAATTGACAAGCATCATTCAGCTTCAGTTTGTTGGGAT
CACTGTTCACACCTTAAAATTGCTT-GCAGGATAACCTTCACCCCAACTGTGCAACACTGCAGTATGGCCACAGTGATTG
GTCTGTGCCTCAGGCTTAAGTTGATGCAAAACTTCCCTCCGCATTTCAAGGTGCTTATTACTATG-------------TT
TCTGTATTCATGGTGTTCTGATTAAGTCAACTGGTTGAGACTTGAGATGCTTTACATTATGTTTTATGTAGCATATGTGC
CATCAGCAGCCATTATCCAAACTTTTAGAGTTTTCACGCATGTTCATTTTAGGCACTTCTGTTATCTTT--TGTCTCTGT
GCAGTGAAATATGGGATAGTTGGAATGTCACAAATTTAACCATTAGTTGATATTGTTTTTTTTCATCCCTCAAGACACTT
GCCACATATGTAC-ACAGATGTGCATGTTTGCAAATTCGTAAACATTGTGTAGATCAAGAGAAGCAGACAGGCATCACAA
GCCATACACCGTAAATTGTGTGCACACATAAAAGCTAGCTCCTATAACCTATAAGAATGTTAATAAACCTACTGAACCAT
TTATGATGGT-TTTTTTATCTGCCTCAGAGGAACCATAAATCATCTCTGAGTCTTTTAAACTTATATTTTCTGTAGAATA
CTATTCATGGATCTGCAAGTTATGTAGTCAGGTGC-TTGTCTTCAGTAGCACTGTTTAAGATTTGGAGCTAGGTATAATG
CAAACGATCTCCAAAAAAAAAGTATATCATAATATTTTGAACAAAACCCCCTTCATAATAATTCCTGATGAATATATTAT
TCAGCTATTAAGCATTTCAGTGGGAATATGATTCCTTTTTTTGGGGGGTTGTATGAATGTGCAGATTGACATTAAGGTTG
CTCCAGGATCTCTTGCTAATGAAGAATCAGGTGCGTAAGATGACAAA---TA-CCTAACTCATGGCTAAGCTTGTAGCTT
TCAGTCTAATACGATTGGGCATTATAACTCATGACAGGGCAGCATTATCGATGGAACTACACAATTAATTCATTTTACTC
TGTACCTGCTGAACTCTGCAAAACGAGAACGGCAGTTGTATAGCACAATTGTGTTTGAACAGCGCTACTTTAGTATGGTA
TGTCGTTATTAACATGCTGGATTGACAGTAAACAAACAGCTGAACGACAAGGAGAGGGTCGCGGCGGCGTTGGAGAACCC
CAACCTCCGGCAGCTGGTGGACGACTGCCTCTGTTCGGATCATCCGTCGTCGTACTAGCTCGCCCCCTGCTGGTGCCCCC
GCAACCCGTGCCTGCCGTACATCAATAATAAGCAGGCGTGGCATGTTGTGTGTTTGCCCTATACTGCACCTGATCATGCA
TGGGCCAAT-------------------------TTTTTCTCTGTTAGTTGTATGCTACTACGTGGACTGGAATATCGTC
----------------------------AGCAATATGCATTTTTCATGCCTGCTTATGCACCAATCCTTCAGAGTAATAG
GGAATAAAGAATGTTGTAGTTTGTTGCGGCATGATCGATTTGGTCCTATCTTACCGCTTCTCTGTCGATTGTTGGTTGGT
GGCTTG--------TTGCCGTCAGGTTTTTGCAAATGGAATGTGATGTGCATTTAAGCCG------------TGCTTTAG
TTGCGATTACTGATTAGTCTCTCCCTTATCTGT---TGTCATGTTTCTCTTT----TAGACGCATCATCATCGTTTGCTG
GTTATCGACTTTGGGAAGAAGGGGAGCCGTGTGGTGCTCCCCTTCTCTCTATGTAATG------TACATAGTCTTGGCAA
TGTCAAAA-TGACTAAATGAGGCAAAGTTCTGATGATGTAATAACGTGTGCGGCTTTGCTTTGCTTGCTGTCCATATGTT
GTATATGCAGCAGCTCGATGAATTTGTCTATCTCCAGTCAGAAG--------AACATGACTCGGATGTTTTATCACCTGT
GAACTGGAAGGAACTTGTCCCGTTGACTGC----------------CCACGACGAGCCCCTCTGATTGCCTCATGGATTG
AAACTTTTTTGCATCACATGAATTGTCAGGTTGCGTGCGATTTGGTTATGTTGTATTTGTTTTTTTTTTTGCATGATAAT
ACGTGTCTCATTTATATAGAATAAAGATCAAGTTACAAGGCACGTAAGCACCGATCATACATGACTGAAAAGATAGGAAG
ATCCTATGCAAAATACCAGCGCCTGTCCCTTTCCTTCGACACCACCGAAGCGGCCACTAAAGGGTAAAAAGACAGATCAC
CTCTTTGCCCAAGCTCGACGCTGCTCCATCGCTGATCAGCAGCTTTACGGACCTCCAAAGTAGTTTGCCAAAAGCAAAAC
CATAGCCGTTGAAAGAATCAGACCGGGGCAACATGTCCCCGGACACGCCATCGAACTTCAGAACTGACACCCTCGTATGA
CGACGACGTCGGAGAAGGAAACCAGAACTGCCCGCCTTCGACCACAGACCCAACACAAGATACTCCATCTTTCAGCTGTC
ACTTGCGTAGACAACCGTCTGCGCGTACTCCTGAACGACAAGACCTCCCTGCTCCACCATGACGTCGGAGACAACGCCAC
AGCAACGGGGACAGAGCAGAAGGAGAGACACACCTGATGGAGTCGCCGCCGCCGCCTCGTCAACACCATCCATGAACCCT
AACGCTGTCGATCTGAGGAATCGACAGAGACACGATGCCATCAACTCCGAGACGCCACCATGAAGGACACCGCCGGTGTG
AGAGTGGGGTTGAGGCAGATTTATTCGTCCGGGCGCCGCTCCCACCACCCCAACGACGCACCACGACCTACAAATCCAAA
ATCTAACTACAGAGCGGAGGAATGGGGTCCCCCCTCCCTCCTGCCGTCGGAGCAGCAGCCGAAGGGAGAGGGGGGCAGCG
CACCGGCCGGTGGAGATCGGAGGAAAAAGTGCCTCGCCCTAGTCGCCTGGTGGCGGCGGCGGCTAGGGTAGGAAATGAAG
GCCGGCCTGTTTCACGCGGTTATGTTGTATTTGTGCTGGACCGCGTGTGCACCCCAGAAATAGCAGTCGGACGTACTCTA
GTACGTACTCCCTCCGTCTGGAAATACTTGTTATCAATAAATCAATAAAATGGGATGTATCTAGATGTATATTAGTTCTA
GATACATCCCTTTTTTATCCATTTTGATGACAAGTATTTTCGGACGGATGGAGTACTTTAGTAGTTTTCATTTTGCTTGC
GGACGAGGCAACTGATAAGTTCAGACAAG---------------------------------------------------
--------------------------------------------------
>chr4D_1035
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------------TGCACGAGCGGCCGGAGCACATAGTCCACCCCGCGCATGCGGCGCTCGACGCGCTCGACGTCTTCGGT
AATGGAAGCG-------------CCCGGATCCC----TCGGTTTCCTTCTTTGGTTTTTT---CCTCC----ATTGATTG
GCTTAG---------------CTTCACTGACTGAC---GGGGA----ACTGATTTGGGCG----TTTGCAGATACGGTGC
AGGACATCAAGGACCCGGAGCACCCCTACTCACTGGAGCAGATACGGTGTGTGCTCTCCCAGGAGTCTGCCTCCGTCTCC
CAGTAGTCCGTCTCCGTCTCCATATCTGGTACGTATACTTGCAAGAATGTGCTGCTCAAGGTTTCT--------------
------------AGTGATTATTAGGAGTTCGGTTTGGGACTAGAAGGTGCTGCTCAAGGTTTCTAGTCCGTCTCAAGGTT
TCTAGTGTTAATTTTCAATGTCAATTGCTTAGTTGCAGGCGTTCTCTCCTGCAGCATCTTGCACTCATCCACCTATGAGC
CCTCCAATCTCTTCTCTATGATCCCCTTCCATTATAAGAAGCCAGAATCATTGTGGGTTTGT--------GGTGGAAATG
CAT--------------------------------------ATTTACATTCATGATA----------------------A
GATAAT-TAG---CACAAATGGCCATTTCTCATCGAT-------------------------ATCACAGTAGAGATTCGG
AGTGTGATCTTGAAAGCACGGTGCATACAGAAACACAATGTTGAGTGCCTTT-ATT-------AAATAGATTAAAAATAA
GTCGCGCGAGTTTGCTTTCTTGTTGGGATTATATTTCCCCGTAGCTTGCTGATCCTACA----TA---ACTTCATTCTGT
ATAC-GGATCTGCGACCTTCAGGATGCATTTACTTATTGCGAGCAAAGCATCCTATATTATTCTCATTGCAC-----TGT
ACACAGTCTGCTCGCACGAAATCTATTTTGTTT-CATGCAAGAAGTCAAGAACTATCATCCAACTTGAACTTTTGGGGAT
CACTGTTCACACCTTACAATTGCTTTGCAGGATAACCTTCACCCCGACTGTGCAGCACTGCAGTATGGCTACGGTGATTG
GCCTGTGCCTCAGGCTTAAGTTGATGCAAAAC------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------
>SNPs
---------------------------------------------------------------------------S----
-----------------------------------------------SSS--S--------------S------------
--------------------------------S-----S------------------------------S----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--SS----------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------S--------------------------------------S-------------------------
-----S----SSSSSSSSSSSSSSSSSSSSSS------------------------------------------------
-------------------------------------------------------S---------S--------------
-------------------------------------S-----S--SS-----S--------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------S----------------------
-------------------------------S-----------S--------------S---------------------
--------------------------------------------------------------------------------
--S------------------------------------------------------------S----------------
---------------------------S----------------------------S----S------------S-----
----------------------------------------------------------------S-S-S----S------
---------------------S----------------------------------S-----------------------
--------------------------------------------------------------------------------
---S--S-------------------------------------------------------------------------
-------------------------------------------------------------S------------------
----------------------------------------S----------------S----------------------
----------------------------S------S------------------------------------SSSSS---
-------------S----------------S--S--------S--------S---S----------------------S-
-S-------------S----------------------------------------------S-----------------
--------------------------------------------------------------------------------
---S-----------------------S---------------------S----------------------S-------
---------------------------------------------------------S----------------------
-------------------------------S-S----------------------------------------------
---------------------S----------------------------------------------------------
-------------------------------S------------------------------------------------
--------------------------------------------------------------------------S-----
--------------------------------------------------------------------------------
--------------------------------------------------------S---------S-S-----------
--------------------------------------------------------------------------------
----------------------------------------------------S---------------------------
----------------------------------SS-------------S------------------S-----------
-------------------------------------S-------------S---------------------------S
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------S------------------------------SS-----
-------S-------S-------------------------S------S----S---S-----------------S----
---SSSSSSSSSSSSSSSSSSSSSSSSS------S------------------S--------------------------
-----------------S-------------------------------------------S------------S--S--
-SSS---------------------S----------------------------------------------S-------
---------------------------------------------------S----------------------------
----------S-------------------------------------------------------------------S-
---------------------S----------------------------------------------------S-----
-----------SSSSSSS-SSSSS--SS-S-SSS-S-SSSS-S-SSSSSSSS----------------------------
----S----------------SS-SSSSS-SSSSSSSSSSSSSSSS------------------S------S----S---
--S---------------S----------------------------SSSSSSS--SSSS-S------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------S---S----------S------------------S-S-S---S
S-S---S-------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------S-SS------S-----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_946
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------TCTTGTCGCGCTCTCTCTCT--------------
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--------------------------------------------------
>reverse_2159
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------------------------------------------------------GT
CCCTGTTCACACCTTGCA--------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------
>forward_2029
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------CTGCGAGCTTCAGAATGCAC---------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------
>reverse_4116
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------TGCGCCATGTCGATCAAAAC-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------
