>input_sequence_37343
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-------------------------------------ATGTCCACGAAGGAAACAAGGTACTATTAATCTATTATCACTT
ACCAGAATTTTCTGAACTATCGATTTGTGCATTCGCCATTCTGTTTAATCACATATGAAACTCTACGAAACTGTTCAATC
ACATATGGAGTTCTACAGTCACTCAACTTAGTTATGGGGTATTCAAGTTTAGACCCGATCTTGAGCTCAGTGGTGTTTAA
TCTGCTTGATTAGAATGAAGATCTTAAAGCAGTGTACATAGTACATACTCCCTCTATCCAAAAATTAGTGTCGCCGTTTA
GTTCAAATTTGAACTAAAACCACGACACTTATTTTGGGATGGAAGGACGGAGTACTATTGTTTTCTCCTGTGCTTCTATT
CACAGATTCTGAAGGGGAGCCTTGGCGCGGTGGTAAAGCTGCTGCCTTCTGACCATGAGGTCACAGGTTCAAGTCCTGGA
AACAGCCTCTTACAGAGATGTAGGGAAAGGCTGCGTACAATAGACCCAAAGTGGTCGGACCCTTCCCCGGACCCTGCGCA
AGCGGGAGCTACATGCACCGGGCTGCCCCCTTTCTATTCACAGATTCCGACTTGACCATGTTTATCCATGAGCTGGTATT
TTAATCAGCATATTGAACTGAACTGTAATATTATCTTATCAAGCAACATTCGATCCTTACCAACATTCTCTGATTGATCT
GCTTCCCGTCACTGCTATTTCATGTTAGCTGCTCTCTGGTGAATGGTCTTTGTGAATAGCTGGATAGTTGTTTTCATAAA
ACTAACCTTTAGGGTATCGTCTAACTTGTTACATTAAGGTTTTCCTTATTGAACTTGGGTTTTCTTATTTACTCCCCTTT
CCATTTATCAAATCCCAAAATTAAATGAGCTTAAATGGATGTATGTACTGATGCTATCTGTACATATCAGAAACTGTTAT
TTGACTTGGACATGGCTTGAATGCCTTCGTTGTGAAACTATTTGAACGCTTCCACAAAGATGTAGCAAGAATTTGGTGTC
TTTATTAGCATTTGTGTCATGATTCATGAAGTACACTGATACAGACAAGTTCTTTTTTTCAGGCTTAAAGAAGTTAATTC
TGTTGGGATGAAAGATTGGGCTAATATTCAGACTGATATTGTTGGTCTAATTATAAAGAAGCTTGGCATTCCTGACTACA
TCAGATTCCGTGCTGTATGCACGTCATGGAACCATATCTGCAAGGAAGTATCCAACCATCCACGGGTGGACCCATGGCTG
ATGCTCCCCACAAAGGCGCTTGAAGGTGCTAAATTTTTTAGGTTACCTGAAAAAAAGAGTCAAACCATCCATATCCCGAG
TGTTGCCACGATCTTTGGATCCATGTGGACTCCGGTTGGTTCATCCCATGGCTGGCTTATCTTCTTTAGCCCGCCACAGG
GAACCATCCAGCTGGTTAATCCCATCAGCAGCACATCGTTCCAACTCCCCTCAATCGGAAGGAAGCACCTGTCCAAGGCC
ATGTTGCTTGACATGAGTGAGAGCAACTTCACTGTTGCTGTCATCCATCGCGACCAAAAAGGATACCAAGTGACACGCAA
AGGAAGTAAAAGCTGGTCGTTTGTCGATTCAAAACACATTTTGGTGGATGTCTTCAAGCACCGAAGGCAACTTTACACCA
TTGATGTATATGGCACGGTCGAGGTGTGGGCAGAGCCTCCCCGTTCATGGCCAGATGATGACTTCCCCCAGGTGGAACCG
CATATGCACAACCTCGTCCACTACCAACACCAGAAGTTCAACTGTCTGGTGGAGACCCCGTCCGGACACCTCATAAGGGT
CAAGCGCCAGTCGCAGAACAAGTTTGCGCTGTGGGTCCTCGACAGGGAGACCTCTTCCTTCGAGCGGACCAGCGACATTG
GGGAATTCGGGCTGTTCGTCAGCCACTACAGCTCGTTCTGTTTCCCGGCCAAGGACCATCCGTACCTGAAGGCAAACTGC
GTCTACTTCATCGACGGCTACAACAACATGTGCGCGTTCAACCTTGAGCATGGGACCAAGGAGCTCGTAGAAGCCCTCGA
AACCGCTGCCCCTGCTCAGAGTCAGCAAGACTTTTACGGGCGCCAGCCTCGAGCAGAGCCGTTCCTATGGTTAATCCCTT
CTCTGAAGTGA---------------------------------------------------------------------
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------------------
>chr3A_1_TraesCS3A01G113600
GCCGTCTAGTTCTGGTCGGCGATTTTGTTGGTGGGTGT-GGGGACGCGTTGATTTGGGGGGTTTTGGTAGGGTTTGGGGG
TTATAGA-TTTTTTAATCGGATTTGCTATTGCTCCTCTAGATGAGAATTAACAAAGCTACATCTAACCCCTACATCATTT
GATTAGTCAAACAAGAAAAAGAAAAGAGAAA-ATTCCCATGAATCTCCGTGTAAAACCAAATGGTGTAGGAGTTAGATGT
CACTTTGTTAGTTTTATATCTTTGATTAATTGATCGAGCTTTGGTGTGATTCCGTGGCCCTTCCAAACGGTTCGTTTGGT
ATGTAAGAAGGATTGTGTATTTGTGTTGTTTAATAGAACATACTGTGGTCGGTCCACGG-------TCCAGGGGATGTGC
ATAAACATCTGTTCATTTAGACGTTCCAATGATAAGCACAGTTTAAACATCAAAGGAGCAGTGTGCCCTATTTTCCTATT
ATAGTTTCCATCTTATCATGTAATTGTACTGGTGTAGGGCTTGTCCAATGGTACATGTGTTGGACTTGTACATCCCTTGT
AACAAACTCCTCTAAACCCCCCAAATATCAATGA----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------AAATG--CTGGAGATCTGGTAACTGAGGTTGCTGATATTTAATGCCGCTGTTAATGCGGCA
GTCGTACTTGCATATATGTACATATGGATTTGTTTCAATTGTAATTTCCATGAAATGTAGTACATGTAGGTCATCTGTGG
TTGGTGATCTGAGTTTACGTGCTGCCGTGCAGCAGCGTAAGTTTATATGTAGAGTGAAGGTTTTCCTTACATTAGAGCTT
CCGTGATAAAAAATTCAAAAGGCACTCCTCCCTGACTCCCTCCTGTCTATTCATGTTGTATCTTATGTCTTAACTTGTGC
GACACTGCACCAGGATATGTTGTTTCCTCTTCCGCCCATTTAATTCAGTTTATGATGTTGTGATGTCACTGCAGTTGAGT
TTGGATCCTCTACATCAGCTGAAGTTATTGTAGTAGCATGTCCACGAAGGAAACAAGGTACTATTAATCTATTATCACTT
ACCAGAATTTTCTGAACTATCGATTTGTGCATTCGCCATTCTGTTTAATCACATATGAAACTCTACGAAACTGTTCAATC
ACATATGGAGTTCTACAGTCACTCAACTTAGTTATGGGGTATTCAAGTTTAGACCCGATCTTGAGCTCAGTGGTGTTTAA
TCTGCTTGATTAGAATGAAGATCTTAAAGCAGTGTACATAGTACATACTCCCTCTATCCAAAAATTAGTGTCGCCGTTTA
GTTCAAATTTGAACTAAAACCACGACACTTATTTTGGGATGGAAGGACGGAGTACTATTGTTTTCTCCTGTGCTTCTATT
CACAGATTCTGAAGGGGAGCCTTGGCGCGGTGGTAAAGCTGCTGCCTTCTGACCATGAGGTCACAGGTTCAAGTCCTGGA
AACAGCCTCTTACAGAGATGTAGGGAAAGGCTGCGTACAATAGACCCAAAGTGGTCGGACCCTTCCCCGGACCCTGCGCA
AGCGGGAGCTACATGCACCGGGCTGCCCCCTTTCTATTCACAGATTCCGACTTGACCATGTTTATCCATGAGCTGGTATT
TTAATCAGCATATTGAACTGAACTGTAATATTATCTTATCAAGCAACATTCGATCCTTACCAACATTCTCTGATTGATCT
GCTTCCCGTCACTGCTATTTCATGTTAGCTGCTCTCTGGTGAATGGTCTTTGTGAATAGCTGGATAGTTGTTTTCATAAA
ACTAACCTTTAGGGTATCGTCTAACTTGTTACATTAAGGTTTTCCTTATTGAACTTGGGTTTTCTTATTTACTCCCCTTT
CCATTTATCAAATCCCAAAATTAAATGAGCTTAAATGGATGTATGTACTGATGCTATCTGTACATATCAGAAACTGTTAT
TTGACTTGGACATGGCTTGAATGCCTTCGTTGTGAAACTATTTGAACGCTTCCACAAAGATGTAGCAAGAATTTGGTGTC
TTTATTAGCATTTGTGTCATGATTCATGAAGTACACTGATACAGACAAGTTCTTTTTTTCAGGCTTAAAGAAGTTAATTC
TGTTGGGATGAAAGATTGGGCTAATATTCAGACTGATATTGTTGGTCTAATTATAAAGAAGCTTGGCATTCCTGACTACA
TCAGATTCCGTGCTGTATGCACGTCATGGAACCATATCTGCAAGGAAGTATCCAACCATCCACGGGTGGACCCATGGCTG
ATGCTCCCCACAAAGGCGCTTGAAGGTGCTAAATTTTTTAGGTTACCTGAAAAAAAGAGTCAAACCATCCATATCCCGAG
TGTTGCCACGATCTTTGGATCCATGTGGACTCCGGTTGGTTCATCCCATGGCTGGCTTATCTTCTTTAGCCCGCCACAGG
GAACCATCCAGCTGGTTAATCCCATCAGCAGCACATCGTTCCAACTCCCCTCAATCGGAAGGAAGCACCTGTCCAAGGCC
ATGTTGCTTGACATGAGTGAGAGCAACTTCACTGTTGCTGTCATCCATCGCGACCAAAAAGGATACCAAGTGACACGCAA
AGGAAGTAAAAGCTGGTCGTTTGTCGATTCAAAACACATTTTGGTGGATGTCTTCAAGCACCGAAGGCAACTTTACACCA
TTGATGTATATGGCACGGTCGAGGTGTGGGCAGAGCCTCCCCGTTCATGGCCAGATGATGACTTCCCCCAGGTGGAACCG
CATATGCACAACCTCGTCCACTACCAACACCAGAAGTTCAACTGTCTGGTGGAGACCCCGTCCGGACACCTCATAAGGGT
CAAGCGCCAGTCGCAGAACAAGTTTGCGCTGTGGGTCCTCGACAGGGAGACCTCTTCCTTCGAGCGGACCAGCGACATTG
GGGAATTCGGGCTGTTCGTCAGCCACTACAGCTCGTTCTGTTTCCCGGCCAAGGACCATCCGTACCTGAAGGCAAACTGC
GTCTACTTCATCGACGGCTACAACAACATGTGCGCGTTCAACCTTGAGCATGGGACCAAGGAGCTCGTAGAAGCCCTCGA
AACCGCTGCCCCTGCTCAGAGTCAGCAAGACTTTTACGGGCGCCAGCCTCGAGCAGAGCCGTTCCTATGGTTAATCCCTT
CTCTGAAGTGATTCAACGTGTGCGAAGCTGAAACTGGCGTGTACCTATATCCTAGAAACCGGTACTCTGAACCACTTACG
TATAACTAGTATAAGTATTGGACGTATTCCTGGTACTTTTGTGGCAAAAACCATATGGCTGAAGTTTGAATTGAG-CAGC
CGGTCGTTGCGTGTGTTTGTT--TTGTATATATAATATATGCAACTGGCTTGTGTTTTTGGACAAAGTT---GTATTACT
AGTCCTGGGTTTGGCATTCTCCCTCCTTGTCCCAGGTGCCAGTGACACATG--CAGAATATCTGGTCG-CATATCTGTGT
GGCAGTGACATG--AGCAGTGCATTTCCACGAAAAAAGTCTGTACTCTCCCAGGAGTAATTTGGTTTCTTGCGAATTTGG
AAGTAACTTCCACTCGGTCAGGAATTCAGAAGCCGGAAGTGTTGCCGTGAGCACCC----AACGCGGTTGCCGATTATCC
CCGCTTCTTTCCCCGCGTTTTCCGAGCAGGTGCAGCCGCTCTGTCCAATATAAGCCAACCGCATCTCATCCCGTGTCGAG
ATC------AACCCAACGCGTCAAACACGTGCGTCGCCATTCCCCACTTTCTCAGGCCA--CAGCGGCGGCACCAGCTCG
ATCTCGCC------------CGCGACCACCGCGC---------CATGGAGCCGGCCGCGACGTCCTACCCGGTGGCGCGG
GACCCGCCGCCGCGGCCGGCGCCGCAGACGGCGCAGCTGGGCGGCGGTCCGGCGGCG---CCGCAGCCCGGCGGGTGGGC
GCGCTGGGCGCTGTGGGCCGTCGTGTCCCTCGTCCTCGCCGCCAGCTTCGCGTGGGGCGTGTACCAGGCGCGGCACCGGC
CGCGGAGCCTCGCCTACGTCGTCGTCACCTACTATCTCCTCGCCGTGCTCTACTGCTGCCTCGGGAAGCTGAGCCTGCTG
CGGCGCGACGACCCGGCGGCGGCGCCCGAGCGGCGCCGGGTCCGGCTCGCCGTGTGGGTCGTCTCCGTGGCGTTCGCCAA
CGTCATCGCCGCGCGCGT
>chr3D_1
GCCGTCTAGTTCTGATCGGCGATTTTGTTGGCGGGGA-CGGGGACGCGTTGATTTGGGGGGTTTTGGTAGGGGTTGGGGG
TTATAGATTTTTTTAATCGGATCTGCTAATGCTCGTCTAGATGAGAATTAACAAAGTCACATCTAACTCCCACATCATTT
GATTAATCAAACAAGAAAAAGAAAAGAGAAAAATCCCCACGAATCTCTGTGTAAAATCAAATGGTGTAGGAATTAGATGT
GACTTTGTTAGTTTTATATCTTTGATTGATTGATCGAGCGTTGGTGCGATTCCGTGGCCCTTCCAAACGCTTCACTTGGT
ATGTAACAAGGATTATGTATTTGTGTTGTTTAATAGAACATCCTGTGGTCGGTCCACGGTCCACCTTCCAGGGGATGTGC
ATAAACATCTGTTCATTTAGACGCTCCAATGATAAGCACAGTTTAAACATCAAAAGAGCAGCGTGCCATATTTTCCTATT
ATAGTTTCCATCTTGTCTGGTGAAGAGTGTATATTTGGATTTAAAATTTGTCCACAAAAGAGTGTACTTCTATCTTCCCA
ATGCACTTTAAAGTTAAAAAAAATGTTCCTCTCTCATCACATGGTAATCAAGACCAATAACATTCTACACACGGTCTTCT
TAATTTCTACATGCACTTAGCTCATTGGGGGTTGGGTAATTAAAGAGGAGAGATGGTGGCTTGCACCTATCCAATGCATT
TTTTACCCCACTTCATAATTTGTCCTAAAATTTCTATATGTACACTTTTCACCGGACGGAGGGAGTACAAATTTGAACTA
AACACTGAAGCTCTTGCTTAAATG--CCAGAGATCTGGTAATTGAGGTTGCTGATATTTAATACCTCTGTTAATGTGGCG
GTCGTATTTGCATATAGGCACATATGCATTTGTTTCAATTGTAATTTCCAGGAAATGTAGTACATGTAGGTCATCTGTGG
TTGGTGATCTGAGTTTATGTGCTGCTGTGCAGCAGCGTAAGTTTATATGTAGAGTGAAGGTTTTCCTTACATTAGAGCTT
CCGTGATAAACAATTCAAAAGGCACTCCTCCCTGACTCCCTCCTGTCTATTCATTTTGTATCTTATGTCTTTACTTGTGC
TACAGTACACCAGGATATGTTGTTTCCTCTTCCGCCCCTTTAATTCAGTTTATGATGTTGTGATGTCACTGCAGTTGAGT
TTGGATC-TCTACATCAGCTGAAGTTATTGTAGTAGCATGTCCACGAAGGAAACAAGGTACTATTAATCTATTATCACTT
ACCAGAATTTTCTGAACTATCGATTTGTGCATTCGCCATTCTGTTTAATCACATATGAAACTCTACGAAACTGTTCAATC
ACATATGGAGTTCCACAGTCACTCAACTTAGTTAT-GGGTATTCAAGTTTAGACCCGATCTTGAGCTCAGTGGTGTTTAA
TCTGCTTGATCAGAATGAAGGTCTTAAAGCAGTGTACATAGTACATACTCCCTCCATCCAAAAATAAATGTTGCCATTTA
GTTCAAATTTGAACTAAAACTACGACACTTATTTTGGGACGGAGGGACGGAGTACTGTTGTTTTCTTCTGTGCTTCTACT
CACATATTCTGAAGGGGAGCCTTGGCGCAGTGGTAAAGCTGCTGCCTTGTGACCATGAGGTCACGGTTTCAAGTCCTGGA
AACAGCCTCTTACAAAAATGTAGGGAAAGGCTGCGTACAATAGACCCAAAGTGGTCGGACCCTTC------------GCA
AGCAGGAGCTACATGCACCGGGCTGCCCCCTTTCTATTCACAGATTCTGACTTGACCATGTTTATCCATGAGCTGGTATT
TTAATCAGCATATTGAACTGAACTGTAATATTATCTTATCAAGCAGCATTCGATCCTTGCCAACATTCTCTGATTGATCT
GCTTCCCGTCACTGCTATTTCATGTTAGCTACTCTCTGGTGAATGGTCTTTGTGAATAGCTGGATAGTTGTTTTCATAAA
ACTAACCTTTAGGGTATCGTCTAACTTGTCACATTAAGGTTTTCGTTATTGAACTTGG-TTTTCTTATTTACTCCCCTTT
CCATTTATCAAAACCCAAA-TTAAATGAGCTTAAATGGATGTATGTACTGATGCTATCTGTACATATCAGAAACTGTTAT
TTGACTTGGACATGGCTTGAATGCCTTCGTTTTAAAACTATTTGAACGCTTCCACAAAGATGTAGCAAGAATTTTGTGCC
TATATTAGCATTTGTGTCATGATTCATGAAGTACACTGATATGCACCAGTTCTTTTTTTCAGGCTTAAGGAAGTTAATTC
TGTTGGGATGAAAGATTGGGCTAATATTCAGACTGATATTGTTGGTCTAATTATAAAGAAGCTTGGCATTCCTGACTACA
TCAGATTCCGTGCTGTATGCACGTCATGGAACCATATCTGCAAGGAAGTATCCAACCATCCAAGGGTGGACCCATGGCTG
ATGCTCCCCACAAAGCCGCTTGATGGTGCTAAGTTTTTTAGCTTACCTGAAAAAAAGACTCAAACCATCCATATCCCGAG
TGTTGCCACGATATTTGGATCCATGTGGACTCCGGTTGGTTCATCCCATGGTTGGCTTATCTTCTTTAGCCCGCCACAGG
GAACCATCCAGCTGGTTAATCCCATCAGCAGCACATCGTTCCAACTCCCCTCAATCGGAAGGAGGCACATGTCCAAGGCC
ATGTTGCTTGACATGAGTGAGAGCAACTTCACTGTTGCTGTCATCCATCGCGACCAAAAAGGATACCAAGTGACACGCAA
AGGAAGCAAAAGCTGGTCGTTTGTCGATTCGAAACACATTTTGGTGGATGTCTTCAAGCACAGAAGGCAACTTTACACCA
TTGATGTATATGGTACGGTGGAGGTGTGGGCAGAGCCTCCCCGTTCATGGCCAGATGATGACTTCCCCCAGGTGGAACCG
CATATGCACAACCTCGTCCACTACCAGCACCAGAAGTTCAATTGTCTGGTGGAGACCCCGTCTGGCGATCTCATAAGGGT
CAAGCGCCAGTCGCAGAACAAGTTTGCGCTGTGGGTCCTCGACAGGGAGACCTCTTCCTTCGAGCGGACCAGCGACATCG
GGGAATTCGGGCTGTTCGTCAGCCACTACAGCTCGTTCTGTTTCCCGGCCAAGGACCATCCGTACCTGAAGGCGAACTGC
GTCTACTTCATCGACGGCTACAACAACATGTGCGCGTTCAACCTCGAGCACGGGACCAAGGAGCTCGTGGAAGCCCTCGA
AGCCGCTGCCCCTGCCCAGAGTCAGCAAGACTTTTACGGGCGCCAGCCTCGAGCAGAGCCGTTCCTATGGTTAATCCCTT
CTCTTAAGTGATCAAACGTGTGCGAAGCTGAAACTGGCGTGTACCTATATCCTAG-AACTGGTACTCTGAACTCCCTAAC
TAGTAC---TATAAGTATTGGACGTATTCCTGGTACTTTTGTGGCAAAAACCATATGGCTGAAGTTTGAATTGAG-CAGC
CGGTCGTTGCATGTGTTTGTTTTGTATATATATA--ATTTGCAACTGGCTTGTGTTTTTGGACAAAGTT---GTATTACA
GGTTCTGTGTTTGCCATTCTCCCTCCTTGTCCCAGGTGCCAGTGACACATGAGCAGTTTATTTGGTTGACATATCTGTGT
GGCAGTGACACATCAGCAGTGTATTTCCGCGAAAAAATA-TGTAATTTCCCAGGAGTAATTTGGTTTCTTGCGAATTTGG
AACTAACTTCCACTCGGTCAGGAATTCAGAAGTCGAAAGTGTAGTCGTGTCCATCGAACGAACGCGGTTGCCGATTATCC
CCGCTTCTTCT-CCGCGTTTTCCGAGCAGGTGCAGCCACTCTGTCGAATATAAGCTAACCGCATCTCATCCCGTGTCGAG
ATC------AACCCAACGCGTCTAACACGTGCGTAGCCATTCCCCACTTTCTCAGGCTAG--AGCGGCAGCACCAGCTCG
ATCTCGCA------------CGCGACCAACGCCGGAGC----GCATGGAGGCGGCCGCGACGTCCTACCCGGTGGCGCGG
GACCCGCCGCCGCGGCCGGCGCCGCAGACGGCGCAGCTGGGCGGCGGCCCGG---CGGCGCCGCAGCGCGGCGGGTGGGC
GCGCTGGGCGCTGTGGGCCGTCGTCTCCCTCGTCCTCGCCGCCAGCTTCGCGTGGGGCGTGTACCAGGCGCGGCACCGGC
CGCGGAGCCTCGCCTTCGTCATCGTCACCTACTACCTCCTCGCCGTGCTCTACTGCTGCCTCGGGAAGCTGAGCCTTCTG
CGCCGCGACGACCCGGCGGCGGCGCCCGAGCGGCGCCGGGTCCGGCTCGCCGTGTGGGTCGTCTCCGTGGCGTTCGCCAA
CGTCATCGCGGCGCGCGT
>chr3B_1
GCCGTCTAGTTCTGATCGGCGATTTTGTTGGTGGGGGGCGGGGACGCGTTGATTTGGGGGGTTTTGGTAGGGTTTGGGGG
TTATAG--TTTTTTAATCGGATTTGCTAATGCTCGTCTAGATGAGAATTAACAAAGTCACATATAACTCCTACATCATTT
GATTAATCAAACAAGAAAAAGAAAAGAGAAA-ATCCCCACGAATCTCCGTGTAAAACCAAATGGTGTAGGAGTCAGATGT
GACTTTGTTAGTTTTATATCTTTGATCAATTGATCGAGCGTTGGTGTGATTCCATGGCCCTTCCAAACGCTTCGTTTGGT
ATGTAACAAGGATTATGTATTTGTGTTGTTTAATAGCACATCCTGTGGTTGGTCCACGG-------TCCAGGGGATGTGC
ATAAACATCTGTTCATTTAGACGTTCCAATGATACGCACAGTTTAAACATCAAAGGAGCAGTGTGCCATATTTTCCTATT
ATAGTTTCCATCTTAGC---------------------------------------------------------------
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-----------------------------------------------------------------TACAAATTTGAACTA
AACACTAAAACTCTTGCTTAAAAATACTGGAGATCTGGTAACTGAGGTTGCTGATATTTAATGCTGCTGTTAATGCGGCG
GTCGTACTTGCGTATATGTACATATGCATTTGTTTCAATTATAATTTCCAGGAAATGTAGTACATGTAGGTCATCTGTGG
TTGGTGATCTGAGTTTACATGCTGCTGTGCAGCAGCATTTGTTTATATGTAGAGTGAAAGTTTTCC-TACATTAGAGTTT
CCGTGATAAAAAATTCAAAAGGCACTCCTTCCTGACTCCCTCCTGTCTATTTATTTTGTATCTTATGTCTTTACTTGTGC
CACAGTGCACCAGGATATGTTGCTTCTTCTTCCGCCCATTTAATTCAGTTTATGATGTTGTGATGTCACTGCAGTTGAGT
TTGGATC-TCTACATCAGCTGAAGTTATTGTAGTAGCATGTCCACGAAGGAAACAAGGTACTATTAATCTATTATCACTT
ACCAGAATTTTCTGAACTATCGGTTTGTGCATTCGCCATTCTGTTAAATCACATATGAAACTCTAAGAAACTGTTCAATC
ACATATGGAGTTCTACAGTCACTCAACGTAGTTATGGGGTATTCAAGTTTAGACCCGATCTTGAGCTTAGTGGTGTTTAA
TCTGCTTGATCAGAATGAAGGTCTTAAAGCAGTGTACATAGTACATACTCCCTCCGTCCAAAAATAAGTGTCGCGGTTTA
GTTCAAATTTGAACTAGAACCACGACACTTATTTTG----GGATGGAGGGAGTACTATTGTTTTCTTCTGTGC-------
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-------------------------------TTCTATTCACAGATTCTGACTTGACCATGTTTATCCATCAGCTGGTATT
TTAATCAGCATATTGAACTGAACTGCAATATTATCTTATCAAGCAGCATTCGATCCTTACCAACATTCTCTGATTGATCT
GCTTCCCGTCACTGCTATTTCATGTTAGCTACTCTCTGGTGAACAGTTTTTCTGAATAGGTGGATAGTTGTTTTCATAAA
ACTAACCTGTATGGTATCGTCTAACTTGTTACATTAAGGTTT-CCTTATTGAACTTGG-TTGTCTTATTTACTCCCCTTT
CCATTTATCAAAACCCAAAATTAAATGAGCTTAAATGGATGTATGTACTGATGCTATCTGTACATATCAGAAACTGTTAT
TTGACTTGGACATGGCTTGAATGCCTTCGTTGTGAAACTATTTGAATGCTTCCACAAAGATGCAGCAAGAATTTGGTGTC
TTTATTAGCATTTGTGTCATGATTCATGAAGTACACTGATATGCACAAGTTTTTATTT-CAGGCTTAAAGAAGTTAATTC
TGTTGGGATGAAAGATTGGGCTAATATTCAGACTGATATAGTTGGTCTAATTATAAAGAAGCTTGGCATTCCTGACTACA
TCAGATTCCGTGCTGTATGCACCTCATGGAACCATATCTGCAAGGAAGTATCCAACCATCCAAGGGTGGACCCATGGCTG
ATGCTCCCCACAAAGCCGCTTGATGGTGCTAAATTTTTTAGCTTACCTGAAAAAAAGACTCAAACCATCCATATCCCGAG
CGTTGCCACGATCTTTGGATCCATGTGGACTCCGGTTGGTTCATCCCATGGTTGGCTTATCTTCTTTAGCCCGCCGCAGG
GAACCATCCAGCTGGTTAATCCCATCAGCAGCACATCGTTCCAACTCCCCTCAATCGGAAGGAGGCACCTGTCCAAGGCC
ATGTTGCTTGACATGAGTGAGAGCAACTTCACTGTTGCTGTCATCCATCGCGACCAGAAAGGATACCAAGTGACACGCAA
AGGAAGCAAAAGCTGGTCGTTTGTCGATTCAAAACACATTTTGGTGGATGTCTTCAAGCACAGAAGGCAACTTTACACCA
TTGATGTATATGGTACGGTTGAGGTGTGGGCAGAGCCTCCCCGTTCATGGCCAGATGATGACTTCCCCCAGGTGGAACCG
CATATGCACAACCTCGTCCACTACCAACACCAGAAGTTCAATTGCCTGGTGGAGACCCCGTCCGGCGATCTCATAAGGGT
CAAGCGCCAATCGCAGAACAAGTTTGCGCTGTGGGTCCTCGACAGGGAGACCTCTTCCTTCGAGCGGACCAGCGACATTG
GGGAATTCGGGCTGTTCGTCAGCCATTACAGCTCGTTCTGTTTTCCGGCCAAGGACCATTCGTACCTGAAGGCAAACTGC
GTCTACTTCATCGACGGCTACAACAACATGTGCGCGTTCAACCTCGAGCACGGGACCAAGGAGCTCGTAGAAGCCCTTGA
AAGTCCTGCCCCTTCCCACAGCCAGCAAGACTTCTACGGGCGCCAGCCACGAGCAGAACCATTCCTATGGTTAATACCTT
CTCTGAAGTGATTAAACGTGTGCGAAGCTGAAACTGGCGTGTACCTATATCCTAG-AACCGGTACTCTGAACTCCCTAAC
TAGTATACAAT----TATTGGACGTATTCCTGGTACTTTTGTGGCAAAAACGATGTGGCTGAAGTTTGAGTTGAACCAGC
CGGTCGTTGCGTGTGTTTGTT--GTATATATATA--ATATGCAACTGGCTTGTGTTTTTGGACAAAGTTGTAGTATTACA
GGTTCTGGGTTTGCCATTCTCCCTCCTTGTCCCAGGTGCCAGTGACACATGTCCAGAATATTTGGTCG-CATATCTGTGT
GGCAGTGACATG--AGCAGTGCATTTCCGCGAAAAAAGTCTGTACTCTCCCAGGAGTAATTTGATTTCTTGCGAATTTGG
AACTAACTTCCACTCGGTCAGGAATTCAGAAGTCGGAAGTGTAGGCGTGTCCATCG----AACGCGGTTGCCGGTTATCC
CCGCTTCTTCT-CCGCGTTTTCCGAGCAGGTGCAGCCACTCTGTCCAATATAAGCCAACCGCATCTCATCTTATCTCGTG
TCGGGATCAAACCCAACGCGTC-AACACGTGTGTACCCATTCCCCACTTTCTCAGGCAGAGCAGCAGCAGCACCAGCTCG
ATCTCGCGACAGCCTCGTCCCGCGCCCAACGCCGGCGCCTGCGCATGGAGACGACCGCGACGTCCTACCCGGTGGCGCGG
GACCCGCCGCCGCGGCCAGTGCCGCAGACGGCGCAGCTGGGCGGCGGCCCGG---CG---CCGCAGCGCGGCGGGTGGGC
GGGCTGGGCGCTGTGGGCGGTCGTGTTCCTGGTCCTCGCCGCCAGCTTCGCGTGGGGCGTGTACCAGTCGCGGCACCGGC
CGCGGAGCCTCGCCTTCGTCATCGTCACCTACTACCTCCTCGCCGTGCTCTACTGCTGCCTCGGGAAGCTGAGCCTCCTG
CGCCGCGACGACCCGGCGGCGGCGCCCGAGCGCCAGCGGGTCAGGCTCGCCGTGTGGGTCGTCTCCGTGGCGTTCGCCAA
CGTCATCGCGGCGCGCGT
>SNPs
--------------S--------------------S-S------------------------------------------
----------------------------S-----S---------------------SS---------S------------
-----S----------------------------S----S----------------------------------------
S--------------------------------------S-----------------------------S----------
------S-------S--------------------------S--------------------------------------
-------------------------------------------------------------------S------------
-----------------SS--S-SSSSSS-SSSS-S--SS--SSSSSS--SSSSSSSSSSS-SSSSSS-SS---SSSSSS
-SSS-SS-SSSSSSS-SSSSSS-SS-SS-SS-SS----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------S
--------------------------S-----------------------S-----------------------------
-------------------------S------------------------------------------------------
------------------------------------------------------S----------------S--------
S---S---------------------------------------------------------------------------
-------S------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------S---------S---------------------------------S----------S--------------
---------------------------------------S---S----------------------S-----------S-
----S-----------------------S-------------------S---------------S-S-------------
--------------S-S------------------------------------------------SSSSSSSSSSSS---
---S-------------------------------------------S--------------------------------
---------------------------------------------S----------------------------------
------------------------------S-------------------------------------------------
----------------------------------------------------------S---------------------
------------S-------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------SSS------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------S-----------------
---------------S-------S-----------------S----------------S---------------------
---------------------------------------------------S----------------------------
---------------------------------------------------------------S----------------
--------------------------------------------------------------------------------
------S------------------------------------------------------S------------------
-------------S-----S------------------------------------------------------------
-----------------------------------------S-----------------------SS-S-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------S-----S-----------------------------
---------------S----------------------------------------------------------------
-------------S-----------------------------------------S----------------SS-S--SS
--SS--SSS-----------------------------------------------------------------------
-----------------------S-S--------SS-------------------------------------------S
S--S---------S-----------------------------------------------S------------------
----------------------------S---------------------------------------------------
--S-----------------------------S---------S-S----SS--S-S------------------------
---------SSS-------------------------S------------------------------------------
----------------------S-----------S----------------------S----------S-----------
-------S--------------------S---SS----------------S-----------------------------
-----------------------------------------------S----SSS------------S------------
--------------------------------------------------------------------------------
---------------S----S-------------S-----------------------------------------S---
--S-----------------------------------------------------------------------------
---------S--------
>forward_38
------------------GCGATTTTGTTGGTGGGTGT------------------------------------------
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>reverse_1697
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----------------GATGTAGGGAAAGGCTGCGT--------------------------------------------
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>forward_528
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----------------------------CTGGTGTAGGGCTTGTCCAA--------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------
>reverse_1757
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------CGCA
AGCGGGAGCTACAT------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------
>forward_1649
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------GTGGTAAAGCTGCTGCCTTC-------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------
>reverse_3374
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------CAACGTGTGCGAAGCTGAAA-----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------
