>input_sequence_37342
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----------------------------------------------------------------------------ATGG
CGCTGACGCTGCGGTCCTCGACGTCCTTCCTCGCGCCGCTCGACCCCTGCTCCAAGCTCCTCCACAAGCCCGAGGACGCG
CCGCCCTCCTGCGTCGCTGTCCCGCAGGCGCCCGCCCGGCTCCGCGCCCTCAGGGCGGCCGCGCAGGCCCCGCCGGCGCC
GATGGAG------GCCCCGGCTCAGT------CCGAGCTGCTGCACGGCCAGGTCCAGCAGGCGAATGCGGGGGGCGGCC
GGCCGAGCAGGGGCGGGGTGCCGGTGTTCGTGATGCTGCCGCTTGACACGGTGGGGCCCGGCGGCCAGGTGTCGCGCGGG
CGCGCGCTGGCGGTGAGTCTGATGGCGCTGCGGAGCGCCGGGGTGGAGGGGGTCATGGTGGACGTGTGGTGGGGCGTGGT
GGAGCGCGAGGGCCCCGGGCGCTACGACTGGGAGGGCTACGCCGAGCTGGTGCGCATGGTGGAGCGCGCCGGCCTACGGC
TCCAGATGGTCATGTCCTTCCATCAGTGCGGCGGCAACGTCGGCGACTCCTGCAAGTAAGCAACACCTCGCCTTGCCAAT
CATCCATTTCATTTAACTCGCCAGCATCATGGGCTACCATAGTCTACCATATACAAATATATGCCTATATACTCTAACAG
GGTGCAATAGAATCAATCAACCATATAGCGCCAGTAAAAAATCGAAGTTAAATTGGTTTAATTCGGTTAGGTTT-CCTCT
AGAATTTGGGA-AAATTTGTCGGTTCAGTATGCCCTGGTTGTGCAAGTGCTCTGTTGTTGAGTAACAACTTGTTCAGTTA
-TGCTACATGGCGTTTTATTACAGGCTCACTTTGTCATTCCTTGCACGTTTGGCAAGGATATGCAGTTCCACTTGGACAA
GCAATCCAAAGTGGCAAGTGAAGCATCAAAAAATAGTTCTCTATTTTAATAGGGTTAGCTGATTAGGTTATTGTTTGCGT
GTGCCAGATTAGTTGCATGATTAGCGAATGAGAAT---TGGGGACAAATGGCTGACTGAAATTGTTGTTTGCAGCATCCC
GTTGCCGCCATGGGTTCTGGAGGAGTTGAACGCCGACCCGGACATCGTGTACACGGACAGGTCCGGCCGCCGCAACCCCG
AGTACATCTCCCTCGGCTGCGACACGCTGCCGGTGCTCAAGGGCCGGACCCCCGTCCAGGTCTACTCCGACTACATGCGC
AGCTTCCGCGACAGGTTCGCCGGCTACCTCGGCACCGTCATCGCCGAGGTCCAGGTTGGCCTGGGCCCCTGCGGCGAGCT
GAGGTATCCTTCCTACCCGGAGGCCAACGGGACATGGAGTTTCCCGGGCATCGGCGAGTTCCAGTGCTACGACAAGTACA
TGCGGGCGTCGCTGCAGGCGGCGGCCGTGGCGGCGGGGCACGAGAACTGGGGGACAAGTGGGCCGCACGACGCCGGTGAG
TACAAGCAGTTCCCGGAGGAGACGGGCTTCTTCCGCCGGGACGGCACG---TGGAGCACCGAGTACGGCCACTTCTTCCT
CAAGTGGTACTCCGGGATGCTCCTGGAGCACGGCGACCGCGTGCTGGCCGCTGCCGAGGCCATCTTCGGCGGCACTGGCG
TCACGCTGTCTGC---CAAGGTCGCCGGCATCCACTGGCACTACCGCACCCGCTCCCACGCCGCCGAGCTCACCGCGGGG
TACTACAACACGCGGCACCACGACGGGTACGAGCCCATTGCGCAGATGCTGGCCAGGCACGGCACCGTGCTCAATTTCAC
GTGCATGGAGATGAAGGACGAGCAGCAGCCCGGCCACGCCGGCTGCTCGCCGGAGCTCCTGGTGCAGCAGGTCAGGGCCG
CGGCG---CGGGCGGCGCGCGTGGAGCTCGCCGGCGAGAACGCGCTGGAGCGGTACGACGAGCAGGCGTTCGCGCAGGTG
GCCGCCACCGCCGAGGCCGCCGGGCTGAGCGCGTTCACGTACCTGCGCATGAACCGGAACCTGTTCGACGGCGACAACTG
GCGGCGGTTCGTCGCGTTCGTGAAGACCATGGCCGACGGTGGCGCGAGGACGACGCTGCCGAGGTGCGACACTGGGCACT
CGGATCTGTACGTGGGGTTCGTTGACGCCGCCAAGGAGCAGAGGGCGCCGGAGTCCGAGGCCGCCGCGGCATTGTAG---
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>chr1D_1_TraesCS1D01G218000
TTAACCGCGACTGCGGCGGAAGCATGACATATACTACCTTTAAATTCGTATTTAAAAGAACTTTTTAAAGATATAATTTT
CCAGTAAAATATTTTATGTATTATTGATCTAATTTATGATCAAAGTTGAATCTGAAAAAGCATGGGCTAACTACATTATG
AAATGAAGGGACTATTGGCAATGCCAAATGTCGTTCGCCAGGCTCAGGCGTGTAGGATGTCTGGGTTAACAGGATCACTC
GAACTGCACGCCTTAAGCCAA-TCCAGTCGACCGATCACGTTACGCATCTCGTCGATTATCCGAAAACACTCCAGTTGCA
AAGGACGCAATGCATTTAGCTTAGTCACCGATAAGTGATGCTCGTCACCCGACTTCTTAGCATTAGCATCCCGCCACACG
CCGTCGAGAGATAATCTTCGCTTCCCGGTTCCCATGAGGCCAGGCCATGACGTAGTACGTCTAGTAGGCCCTTGGCCCAA
CCGATCTCACTCACTCACCTACACGTGTCCACGTGTGGTGCTAATTAGTCAT---GAAACTAACACAGGTGTCGACCTCC
CAACTAATCTCCCCTGAGAAACAAATTGAATCCTTGCAAATGGATAAACTTCTCCTCAAAAGCGCAAATGGAAAAGATAT
AG---TAGCGCTAGGAGACTACTGGTAGAATGGAGTAGCGTGGCTCTAGCCGTGCATGCAGGGGAGAGGAAAAGTGTCAA
CCCGAGGTATCCACTCCACTCCAC---------------------AGCGATAAGCACTCGCCAGTCGTCACCGCCACACG
CTTCCTCCACCGCCCGCAGAAGAAAATTGAAAATTCGCCTATATATACCGCGCCCCACAGCCCACCTC-CCACAACACCG
AGCTCCATTCATTCCGTTCCGTTCGCCCAACCGATAGAAAAGTCTCGTCATCTTCACAGGAC-------CCAAGCCAAGC
AATCCCCTCTCCTCTTCGCTTCCTCCGACGACTCTCTTCTCGCCGAGCGTCTCCTCCGAGCACGCGTAGCGGATCCATGG
CGCTGACGCTGCGGTCCTCGACGTCCTTCCTCGCGCCGCTCGACCCCTGCTCCAAGCTCCTCCACAAGCCCGAGGACGCG
CCGCCCTCCTGCGTCGCTGTCCCGCAGGCGCCCGCCCGGCTCCGCGCCCTCAGGGCGGCCGCGCAGGCCCCGCCGGCGCC
GATGGAG------GCCCCGGCTCAGT------CCGAGCTGCTGCACGGCCAGGTCCAGCAGGCGAATGCGGGGGGCGGCC
GGCCGAGCAGGGGCGGGGTGCCGGTGTTCGTGATGCTGCCGCTTGACACGGTGGGGCCCGGCGGCCAGGTGTCGCGCGGG
CGCGCGCTGGCGGTGAGTCTGATGGCGCTGCGGAGCGCCGGGGTGGAGGGGGTCATGGTGGACGTGTGGTGGGGCGTGGT
GGAGCGCGAGGGCCCCGGGCGCTACGACTGGGAGGGCTACGCCGAGCTGGTGCGCATGGTGGAGCGCGCCGGCCTACGGC
TCCAGATGGTCATGTCCTTCCATCAGTGCGGCGGCAACGTCGGCGACTCCTGCAAGTAAGCAACACCTCGCCTTGCCAAT
CATCCATTTCATTTAACTCGCCAGCATCATGGGCTACCATAGTCTACCATATACAAATATATGCCTATATACTCTAACAG
GGTGCAATAGAATCAATCAACCATATAGCGCCAGTAAAAAATCGAAGTTAAATTGGTTTAATTCGGTTAGGTTT-CCTCT
AGAATTTGGGA-AAATTTGTCGGTTCAGTATGCCCTGGTTGTGCAAGTGCTCTGTTGTTGAGTAACAACTTGTTCAGTTA
-TGCTACATGGCGTTTTATTACAGGCTCACTTTGTCATTCCTTGCACGTTTGGCAAGGATATGCAGTTCCACTTGGACAA
GCAATCCAAAGTGGCAAGTGAAGCATCAAAAAATAGTTCTCTATTTTAATAGGGTTAGCTGATTAGGTTATTGTTTGCGT
GTGCCAGATTAGTTGCATGATTAGCGAATGAGAAT---TGGGGACAAATGGCTGACTGAAATTGTTGTTTGCAGCATCCC
GTTGCCGCCATGGGTTCTGGAGGAGTTGAACGCCGACCCGGACATCGTGTACACGGACAGGTCCGGCCGCCGCAACCCCG
AGTACATCTCCCTCGGCTGCGACACGCTGCCGGTGCTCAAGGGCCGGACCCCCGTCCAGGTCTACTCCGACTACATGCGC
AGCTTCCGCGACAGGTTCGCCGGCTACCTCGGCACCGTCATCGCCGAGGTCCAGGTTGGCCTGGGCCCCTGCGGCGAGCT
GAGGTATCCTTCCTACCCGGAGGCCAACGGGACATGGAGTTTCCCGGGCATCGGCGAGTTCCAGTGCTACGACAAGTACA
TGCGGGCGTCGCTGCAGGCGGCGGCCGTGGCGGCGGGGCACGAGAACTGGGGGACAAGTGGGCCGCACGACGCCGGTGAG
TACAAGCAGTTCCCGGAGGAGACGGGCTTCTTCCGCCGGGACGGCACG---TGGAGCACCGAGTACGGCCACTTCTTCCT
CAAGTGGTACTCCGGGATGCTCCTGGAGCACGGCGACCGCGTGCTGGCCGCTGCCGAGGCCATCTTCGGCGGCACTGGCG
TCACGCTGTCTGC---CAAGGTCGCCGGCATCCACTGGCACTACCGCACCCGCTCCCACGCCGCCGAGCTCACCGCGGGG
TACTACAACACGCGGCACCACGACGGGTACGAGCCCATTGCGCAGATGCTGGCCAGGCACGGCACCGTGCTCAATTTCAC
GTGCATGGAGATGAAGGACGAGCAGCAGCCCGGCCACGCCGGCTGCTCGCCGGAGCTCCTGGTGCAGCAGGTCAGGGCCG
CGGCG---CGGGCGGCGCGCGTGGAGCTCGCCGGCGAGAACGCGCTGGAGCGGTACGACGAGCAGGCGTTCGCGCAGGTG
GCCGCCACCGCCGAGGCCGCCGGGCTGAGCGCGTTCACGTACCTGCGCATGAACCGGAACCTGTTCGACGGCGACAACTG
GCGGCGGTTCGTCGCGTTCGTGAAGACCATGGCCGACGGTGGCGCGAGGACGACGCTGCCGAGGTGCGACACTGGGCACT
CGGATCTGTACGTGGGGTTCGTTGACGCCGCCAAGGAGCAGAGGGCGCCGGAGTCCGAGGCCGCCGCGGCATTGTAGGGA
GCTTACGTTTGTGTACACATATCACATCCCCTTGTGTATATGCTCGACGTGGTAACGTGCGCCGGGAAGGGGGCTGTATA
TTATGATTTGTGCGTGCAGGTTACAGGATTTTATGGCTGTAATCGAGCATTTGTGCTTAGGCCACCTCACTTTTTTTTTC
TATTCCATTCGAGAATGTTGGAATTTCGGAGAAGATGTAATCGCATTAAAC-----------------------------
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--------------------------------------------------------------------AAAAAAGACCTC
CTTCAAGGACTCAAA-CAATTACTTTTTTGAACAATCACCCGGGGAGAGGCTCCCCTCTCAAATGCGTTAATCACAGCGT
CGAGAAGGCGAGTTTACAGTGTT----GGGCTATCGAGCGAAGGGAGGTATTGATGCC-------ATGGCGCCGACCTTC
TAAAGTGTACTCCTAAATCTAGAAGTCAAAAGAC-AAAGTCATGAACAATAATTTTA-----------------------
------------------------ATGTTTAGCGGTCAAACCATTTAGATCATCAGAATCCTAGACTTCAAAACTTGATC
TTATTTGTCCCATTAAGGAGAAAATAGAGAATGGTGATAGGATCGTATCACCATTAACTTTCGACACAATCTTTTGGGCA
ACCGTCCTTGGCTCTGTTGTTCTTTATGACCCACTACTCGATCGTAAGATGGTCCATACC---AGGATTCTAACTTTCAG
AGTTGGTTTATGTTGAGAGGGTCCCTCTTAACTCTTGATTTCACCCAGAAAAATATCCGCAACAACTAGTACTTGAAGCG
TGGGTAAGTAGCCATCTTGG-----ATGGTCGGAAAAGTGTGTTGTAGGAGTCATTTATTGATCTCCTGCCTTCTTCCTC
CCACCTCTAATCATATGTTGCGTGAGCTATATCTTGTGCGCTTTGAGAGAGGGGTTGATCTAAGTTGCTTGGTTGCATTG
ATTACATCGACTTGAACACTCTGCATCAATTGGTTTGAATGAGATGCTGAAAGCTAGCGGAGGCCATCACTTTATAGATG
GCTTGATAG-CGTTAGCTCGGTGATCTCTTTGAGAAGTTAAAG
>chr1A_9
--------GACAGCGGCGGGAGCATGATAGATAC---CTTTGAATTTGTATTTGAAACAAGTTTCCAAAGATATAAATTT
TCAATAGAATGATTTATGTGCTATTGATCTAATTTATGGTCAAAATTGAATCTGAAGAAACATGAATGTATTAAATTATG
GAACGAAGGAAGTATTGGCAATGCCAAATGTCGTTTGCCAGGCTCAGGCGTGTGGGACGT-TGGGTTAAGAGGATCACTC
GAACGGCACGCCTTAAGCCGA-TCTAGTCGACCAATCACGCTACGCATCTCGTCGATTATCCGAAAACACTC--------
-----------------AGCTTAGTCACCGATAAGTGATGCTCGTCACCCGACTTCCTC------GCATCCCGCCACGCG
CCGGCCAGAGATAATCTTCGCCTCCCGGTTCTCATGAGGCCAGGCCATGACATAGTACGTCTAGCAGGCCCTTGGCCCAA
CCGATCCCACTCACTCACCTACACGTGTTAACGTGCGGTGCTAATTAGTCAT---GAAACCAGTACAGGTGTCGACCTCC
CAACTAATCTCCCC-GAGAAGCAAATTGAATCCTTGCAAATGGATAAACTCCTTCTCAAAAGTGCAAATGGAAAAGATAT
TACT-------------ACTAGTACTAGAATGGAGTTCTGT-GCTCTAGGAGTGCATGCATGGGAGAGGAAAAGTGTCGA
CCCGAAGTATCCACTCCACTCCACTCCACCGTGGCCAATTAGTTTAGCGATAAGCACTCGCCACG-------------CG
CCTCCTCCGCCCCCCGCGGAAGAAAATCGAAAATTCGCCTATATATACCGCGCCCCACAGCCCACCTCCCCACAACACCG
AGCTCCATTCATTCCGTTCCGTTCGTTCAGCCGATAGAAAAGTCTCGTCGTACTCTCACAGGACCCAAGCCAAGCCAAGC
AATCCCCTCTCCTACTCTCTTCCTCCGACGACTCTCTTCTCGCCGAGCGTCTCCTCCCAGCACGCGTAGCGGAT-CATGG
CGCTGACGCTGCGGTCCTCGACGTCCTTCCTCGCGCCGCTCGACCCTTGCTCCAAGCTCCTTCACAGGCCCGAGGACGCG
CCGCCCTCCTCCGTCGCCGTCCCGCAGGCGCCCGCCCGGCTCCGCGCCCTCAGGGCGGCCGCGCAGGCCCCGCCGGCGCC
GATGGAG------GCTCCCGCTCCGATCCCGGCCGAGCTGCTGCACGGCCAGGTCCAGCAGGCGAACGCGGGCGGCGGCC
GGCCGAGCAGGGGCGGGGTGCCGGTGTTCGTGATGCTGCCGCTTGACACGGTGGGCCCCCGGGGCCAGGTGTCGCGCGCG
CGGGCGCTGGCGGTGAGTCTGATGGCGCTGCGGAGCGCCGGGGTGGAGGGCGTCATGGTGGACGTGTGGTGGGGCGTGGT
GGAGCGCGACGGCCCCGGGCGCTACGACTGGGAGGGCTACGCCGAGCTGGTGCGCATGGTGGAGCGCGCCGGCCTACGGC
TCCAGATGGTCATGTCCTTCCATCAGTGCGGCGGCAACGTCGGTGACTCCTGCAAGTAAGCAACTCTCCGCCTTGCCGAT
GATCCATCTCA-TTTACTTGCCAGCATCATGGACTGCGC-----------------------------------------
--TGCAATAGAATCAATCAACCATACAGCGCGAGTAAAAAACCGCAGTTAAATTGGTTTAATTCGATTAGGTTTTCCTCT
CGAATCTGGGAGAAATTTGTCGGTTCAGTATGCTCTGGTTGTGCAAGTGTTCTGTTGTTGAGTAACAACTTGTTCAGTTA
GTGCTACATGGCGTTTGATTACAGGCTCACTTTGTCATTCCTTGCACGTTTGGCAATGATATGCAGTTCCACTTGGACAA
GCAATCGGCGAGTATAC-----------AAAAATAGTTCTCTATTTTAATGGGGTTAGCTGATTAGGTTATTGTTTGCGT
GTGCCAAATTAGATACATGATTAGCGAATGAGAAT---TGGGGACAAATGGCTGACTGAAATTGTTGTTTGCAGCATCCC
GTTGCCGCCATGGGTTCTGGAGGAGGTGAGCGCCGACCCGGACATCGTGTACACGGACAGGTCCGGCCGCCGCAACCCCG
AGTACATCTCCCTCGGCTGCGACACACTGCCGGTGCTCAAGGGCCGGACCCCCGTCCAGGTCTACTCCGACTACATGCGC
AGCTTCCGCGACAGGTTCGCCGGCTACCTCGGCACCGTCATCGCCGAGGTCCAGGTTGGCCTGGGCCCCTGCGGCGAGCT
GAGGTATCCTTCCTACCCGGAGGCCAACGGGACGTGGAGTTTCCCGGGCATCGGCGAGTTCCAGTGCTACGACAAGTACA
TGCGGGCGTCGCTGCAGGCGGCGGCCGTGGCGGCGGGGCACGAGAACTGGGGGACAAGTGGGCCGCACGACGCTGGTGAA
TACAAGCAGTTTCCGGAGGAGACGGGCTTCTTCCGCCGGGACGGCACG---TGGAGCACCGAGTACGGCCACTTCTTCCT
CAGGTGGTACTCCGGGATGCTCCTGGAGCACGGCGACCGCGTGCTGGCCGCTGCCGAGGCCATCTTCGGCGGCACTGGCG
TCACGCTGTCTGC---CAAGGTCGCCGGCATCCACTGGCACTACCGGACCCGCTCCCACGCCGCCGAGCTCACCGCGGGG
TACTACAACACGCGGCACCACGACGGGTACGAGCCCATCGCGCAGATGCTGGCCAGGCACGGCACCGTGCTCAACTTCAC
GTGCATGGAGATGAAGGACGAGCAGCAGCCCGGCCACGCCGGCTGCTCGCCGGAGCTCCTGGTGCAGCAGGTCAGGGCCG
CGGCG---CGGGCGGCGCGCGTGGAGCTCGCTGGCGAGAACGCGCTGGAGCGGTACGACGAGCAGGCGTTCGCGCAGGTG
GCCGCCACCGCCGAGGCCGCCGGGCTGAGCGCGTTCACGTACCTGCGCATGAACCGGAACCTGTTCGAGGGCGACAACTG
GCGGCGGTTCGTCGCGTTCGTGAAGACCATGGCCGACGGCGGCGCGAGGACGGCGCTGCCGAGGTGCGACACCGGGCAAT
CGGATCTGTACGTGGGGTTCGTTGACGCCGCCAAGGAGCAGAGGGCGCCGGAGTCCGAGGCCGCCGCGGCATTGTAGGGA
GCTTACGTTTGTGTACACATATCACATCCCCTTGTGTATATGCACGACGTGGTAACGTGCGCCGGGAGGGGGGCTGTATA
ATATGATCTGTGCGTGCAGGTTACAGGATTTTATGGCTGTAATCGAGCATTTGTGCTTAGGCCACCTCACTTTTTTTTTC
TATTCCATTCGAGAATGTTGGAATTTCGGAGAAGATGTAATCGCATTAAAC-----------------------------
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--------------------------------------------------------------------AAAAAAGACCTT
CGTCAAGGACTCAAAACAATTTCTTTTTTGAACCATCACCCGGGGAGAGGCTCCCCACCCAAATGCGTTAATCACAGCGT
CGAGAAGGCGAGTTTATAGAGGGAGATGGGCTATCGCGCCAAAGGAGGTATTGACGCCATGACAT--GGCGCCGACCTTC
TAAAGTGTACTCCTAAATCTAGAAGTCAAAAGAATAATGTCATGAACAATAATCTTAATGGTTACATGAACGGAGTGACG
GTTCCCTCGGAAGTCATGAACAATATGTTTAGCGGTCAAACCATTTAGATCGTCAAAACCCTGGACTTTAAAACTTGATC
TTATTTGTCCCATTAAGCAGAAAATAAAGAATGGTGATAGGATCGTATCACCATTAACTTTGGGCGCAATCCTTTGGGCA
ACCGTCCTTGGCTCTGTTGTTCTTTATGACCCTCTACTTGATTGTAAGATAGTCCACACCAAGAGGATTCTAACTTTCGG
AGTTGGTTTATGTTGAGAGGGTCCCTATTAACTCTTGATTTCGCCCAAAAAAATATCCACAGCAACTAGTACTTGAAGCG
TGGCTAAGTAGGCATCTTGGGGAACATGGTCGGAGAAGTGTGCTATAGGAGTTATTTATTGATCTCCTGCCTTCTTCATC
CCACCTCTAATCATATGTTGCGTGAGCTATATCTTGTGCGCTTTGAGAGAGGGGTTGATCTAAGTTGCTTGGTTGCATTG
ATTACATCGACTTGAACACTCTGCATCGATTGGTTTGAATGAGATGTTGAAAGCTAGTAGAGGCCATCACTTTATAGATG
GTTTGGTAGCCGTTAGCTCGGTGATCTCTTTGAGAAGTTAAAG
>chr1B_245
--------------------------------------------------------------------------------
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----TGCACGGCTTAAGCGAAGTCCAGTCGGCCAGTCACGTTACGCATCTCATCGATTATCCGAAAACACTCCAGTTGTA
AAGGACACAATGCATTTAGCTTAGTCACCGATAAGTGATGCTCGTCACCCGACTTCC------TAGCATCCCGCCACACC
CCGGCCAGAGATAATCTTCACTTCCCGGTTCCCATGAGGCCAGGCCATGACGTAGTACGTCTACTAGGTCCTTGGCCCAA
CCGATCGAT----CTCACCTACACGTGTTGACGTGTGGTGCTAATTAGTCATCATGAAACTAATACAGGTGTCGACCTCC
CAACTAATCTCCCC-GAGAAACAAATTGAATCCTTGCAAAAGGATAAACTTCTTCTCAAAAGTGCAAATGGAAAAGATAT
ACTACTAGCACTAGGAGACTACTGGTAGAATGGAGTACTGT-GCTCTAGGCGTGCATGCATGGGAGAGGAAAAGTGTCAA
CCCGAAGTATCCACTCCACTCCACCCCACCGTGGCCAAG-----TAGCGATAAGCACTCGCCAGTCGTCACCGCCACATG
CCTCCTCCACCGCCCGCGGAAGAAAATTGAAAATTCGCCTATATATACCGCGCCCCACAGCCCACCTC-CCACAACACCG
AGCTCCATTCATTCCATTCCGTTCGCCCAACCGATAGAAAAGTCTCGTCATCTTCAAAGGAC-------CCAAGCCAAGC
AATCCCCTCTCGTCTTCTCTTCCTCCTCCCATTCTCACCGAGAA-------TCTTCCGAGCACGCGTAGCGGATCCATGG
CGCTGACGCTGCGGTCCTCGACGTCCTTCCTCGCGCCGCTCGACCCCTGCTCCAAGCTCCTCCACAGGCCCGAGGACGCG
CCGCCCTCCTGCGTCGCCGTCCCGCAGGCGCCCGCCAGGCTCCGCGCTCTCAGGGCGGCCGCGCAGGCCCCGCCGGCGCC
GATGGAGACCCCGGCCCCGGCTCAGT------CCGAGCTGCTGCACGGCCAGGTCCAGCAGGCGAACGCGGGGGGCGGCC
AGCCGAGCAGGGGCGGGGTGCCGGTGTTCGTGATGCTGCCCCTTGACACGGTGGGGCCCGGCGGGCAGGTGTCGCGCGCG
CGGGCGCTGGCGGTGAGTCTGATGGCGCTGCGGAGCGCCGGGGTGGAGGGGGTCATGGTGGACGTGTGGTGGGGCGTGGT
GGAAAGGGATGGACCCGGACGGTACGACTGGGAGGGCTACGCCGAGCTGGTGCGAATGGTGGAGCGCGCCGGCCTCCGCC
TCCAGATGGTCATGTCCTTCCATCAGTGCGGCGGCAACGTCGGCGACTCCTGCAAGTAAGCAACATCTCGCCTTG-----
--------------------------------------------------------------------------------
----------------------------------------------GTTAAATTGGTTTAATTCGATTAGGTTTTCCTCG
CAAGTTTGGGAGAAATTTGTCGGTTCAGCATGGCCTGGTTGTGCAAGTGTTCCGTTGTTGAGTAACAACTTGTTCAGTTA
GTGCTACATGGCGTTTGATTACAGGCTCACTTTGTCATTCCTTGCACGTTTGGCAAAGATATGCAGTTCCACTTGGACAA
GCAATCC-AAGTGGCAAGTGAAGTATCAAAAAATTGTTCTTTATTTTAATAGGGTTAGCTGATTA--------TTCGCGT
GTGTCAAATTAGGTGCATAATAATTAGTGAACAAAAACTGGGGACAAATGGCTGACTGAAATTGTTGTTTGCAGCATCCC
TTTGCCGCCATGGGTTCTGGAGGAGGTGAACGCCGACACGGACATCGTGTACACGGACAGGTCCGGCCGCCGCAACCCCG
AGTACATCTCCCTCGGCTGCGACACGCTGCCGGTGCTCAAGGGCCGGACCCCCGTCCAGGTCTACTCCGACTACATGCGC
AGCTTCCGCGACAGGTTCAGCGGCTACCTTGGCACCGTCATCGCCGAGGTCCAGGTTGGCCTGGGCCCCTGCGGCGAGCT
GAGGTATCCTTCCTACCCGGAGGCCAATGGGACATGGAGTTTCCCGGGCATCGGCGAGTTCCAGTGCTACGACAAGTATA
TGCGGGCGTCGCTGCAGGCGGCGGCCGTGGCGGCGGGGCACGAGAACTGGGGGACAAGTGGGCCGCACGACGCCGGTGAG
TACAAGCAGTTCCCGGAGGAGACGGGCTTCTTCCGGCGGGACGGCACG---TGGAGCACCGAGTACGGCCACTTCTTCCT
CAAGTGGTACTCCAGGATGCTCCTGGAGCACGGCGACCGCGTGCTGGCCGCTGCCGAGGCCATCTTCGGCGGCACTGGCG
TGACGCTGTCTGC---CAAGGTCGCCGGCATCCACTGGCACTACCGGACCCGCTCCCACGCCGCCGAGCTCACCGCGGGG
TACTACAACACGCGGCATCACGACGGGTACGAGCCCATCGCGCAGATGCTGGCCAGGCACGGCACCGTGCTCAATTTCAC
GTGCATGGAGATGAAGGACGAGCAGCAGCCGGGCCACGCCGGCTGCTCGCCGGAGCTCCTGGTGCAGCAGGTCAGGGCCG
CGGCG---CGGGCGGCGCGCGTGGAGCTCGCCGGCGAGAACGCGCTGGAGCGGTACGACGAGCAGGCGTTCGCGCAGGTG
GCCGCCACCGCCGAGGCCGCCGGGCTGAGCGCGTTCACGTACCTGCGCATGAACCGGAACCTGTTCGACGGCGACAACTG
GCGACGGTTCGTCGCGTTCGTGAAGACCATGGCCGACGGCGGCGCGAGGACGGCGCTGCCCAGGTGCGACACTGGGCACT
CGGATCTGTACGTGGGGTTCGTTGACGCCGCCAAGGAGCAGAGGGCGCCAGAGTCCGAGGCCGCCGCGGCATTGTAGGCA
GTG-ACGTTTGTGTACACATATCACAT--CCTTGTGTATATGCACGACGTGGTAACGTGCGCCGGGAAGGG-GCTGTATA
TTATGATCAGTGCGTGCAGGTTGCAGGATTTTATGGCTGTAATCGAGCATTTGTGCTTAGGCCACCTCACTTTTTTTTTC
TATTCCATTCGAGAATGTTGGAATTTCGGAGAAGATGAAATTGCATCCATATCTATATCTATTCCAATATAAAAAAAAAA
TTCAAAGTGGCAGATCCAATTAATCTCGGTCATCAAATCATGTCAATTGAACGACCTAGACTGCTTCAATATCAAGCGCT
CAACATGTTTAGCGTGCAGTTAATTTCATGCAAAATATATTGCTAATCATATAATAACATGCAAATAATATCCTACTTAA
TATCCACATGCATTTAATATATATACTTTCAAATTAACGTGTATTGCACGTATACATTGACTAGTTAGAAAAAAGACCTC
CGTCAAGGACTCAAACCATTTTCCTTCTTAACAATCACGT--GGGAGAGGCTCTCCACCCAAATGCATTACTCAAAGCGC
CAAGAAGGCGAGTTTAAAGAGTTAGAGGTA---------------------TGATGCCATGACATATGGCGTCGATCTTC
TAAAGTGTACTCCTAAATCTAGAAGTCCAAAGAGTAAAGTCATGAACAATATTTTTAGTGGTTACATGAGCAGAGGGGTG
GTGCTGTCGGAAGTCATGAACAATATGTTTAGCGGTCAAACCATTTAGATCACCAGAATCCTAGGCTTTTATAATTGATC
ATATTTGTCCCATCAAGCAGAAAATAGAGAATGGTGATATGATCGGATCACCATTAACTTCCGCCGACATTCTCTGGGCA
ACCATTCTTGGCTCTGTTGTTCTTTATGACCCACTATTCGATTTTAAGATAGTCGACACCAAGAGGATTGTGACTTTCAG
AGTTGGTTTATGTTGAGAGGGTCGCTATTAACTCTGGATTTCACATAGAAAAATATCGGCAACAACTAGTATTTGAAGCG
TGGCTAAGTAGGCATCTTGG-----ATGGTCGGAGAAGTGTGCCCTAGGAGTCATTTATTGATCTCATGCCTTGTTCATC
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-------------------------------------------
>chr1A_2406
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-----------------------------------------------------------GGGCCGACGGACGCCGGCGGC
TACAACAGCCGGCCGGACGACACGGACTTCTTCCGCCAGGACGGCGGTGGCTGGGACTCCGAGTACGGCCAGTTCTTCAT
GTCCTGGTACTCGCGGATGCTCCTGGAGCACGGCGACCGCGTTCTGTCCGGCGCGGCGTCCGTGTTCGGCCACGAGCCCG
GCGTCCATCTATCGGTCAAGGTCGCCGGCATCCACTGGCACTACGACACAGAGTCGCACGCGCCGGAGCTCACGGCCGGG
TACTACAACACGCGGCGCCGCGACGGGTACCTCCCGATCGCGCGCATGCTGGGCCGCCACGGCGCCGTGCTCAACTTCAC
CTGCGTGGAGATGCGCGACCACGAGCAGCCACAGGACGCGCGGTGCATGCCGGAGGGCCTGGTGCGGCGTGT---GGCCT
CAGCCGCCCGCGAGGCTGGCGTCGGCCTGGCCGGTGAGAACGCGCTGCCCCGGTACGACGATGCGGCGCACGACCAGGTG
GTGGCCACGGCTCAGGAGGAGCGGATGGTGGCGTTCACGTACCTCCGCATGGGCCCCGACCTGTTCCAGCCCGACAACTG
GCGCCGCTTCG---------------------------------------------------------------------
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-------------------------------------------
>chr1B_2406
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-----------------------------------------------------------GGGCCGACGGACGCCGGCGGC
TACAACAGCCGGCCGGACGACACGGACTTCTTCCGCCAGGACGGCGGTGGCTGGGACTCGGGGTACGGCCAGTTCTTCAT
GTCCTGGTACTCGCGGATGCTCCTGGAGCACGGTGACCGCGTTCTGTCCGGCGCGGCGTCCGTGTTCGGCCACGAGCCCG
GCGTCCATCTATCGGTCAAGGTCGCCGGCATCCACTGGCACTACGACACAGAGTCGCACGCGCCGGAGCTCACGGCTGGG
TACTACAACACGCGGCGCCGCGACGGGTACCTCCCGATCGCGCGCATGCTGGGCCGTTACGGCGCCGTGCTCAACTTCAC
CTGCGTGGAGATGCGCGACCAGGAGCAGCCACGGGACGCGCGGTGCCGTCCCGAGGGCCTGGTGTGGCGTGT---GGCCG
CGGCCGCCCGCGAGGCCGGCGTCGGCCTGGCCGGTGAGAACGCGCTGCCCCGGTACGACGATGCGGCGCACGACCAGGTG
GTGGCCACTGCTCGGGAGGAGCGGATGGTGGCGTTCACGTACCTCCGCATGGGCCTCGACCTGTTCCAGCCCGACAACTG
GCGCCGCTTCGCCTCATTCGTGA---------------------------------------------------------
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-------------------------------------------
>SNPs
SSSSSSSS---S-------S-------S-S----SSS----S----S------S---S--S---SS----------S---
S--S--S---SS-------SS-----------------S-----S-----------S--S----SSSSS-S--S------
S--S-----S-S-----------------------S-----------------S---S--S--------S----------
---------------------------------S--------------------------------------------S-
------S-------------------------------------------------S-SSSSS-----------------
---S-S--------------------------------------------------------------------------
------S---------------------SS---------------------------------S----------------
--------------S--------------------------------------S--------S-----------------
-S-------S---------------------------SS--S-------S----------S-------------------
-----S--------------------------------------------------------------------------
-S---------------S--------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------S--------------------------------------------------------------
------------------------------------------------------------------S-------------
-----------------S--------------------------------------------------------------
------------------------------------------------------------------S-------------
------------------------------------------------------------------------------S-
--S-----------------------------------------------------------------------------
---------S----------------------------------------------------------------------
-----------------------------------------------------------------------------S--
S------S---S--S---S-------------S--S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SS-----------------------S-----S---------S--S--------------------S--------------
S------------------------------------------------S------------------------------
----------------S---------------------------------------S-----------------------
-------S---------------S--------------------------------------------------------
------S-----S-------------------------------------------------------------------
-------------------------S------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------S-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------S------------S---------------------------
--------------------------------------------------------------------------------
-------------------------------------------S------------------------------------
-------S------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-S-------------------S----------------------------------S-S---------------------
----------------S--S----------------S--S--S-------------------------------------
---------------------------------S----------------------------------------------
--------------------------------------------------------------------S-----------
-----------------S---------------------------------------------S-S-----S--------
------------------------------------------S-------S-----S-----------------------
--------------------------S-----------------------------------------------------
---S-------S----------------------S-------S-S--------------------------------S--
--------------------------------------------------------------------------------
---------------------------S------------------S----------SS---------------------
-S---S-------------------------------------
>forward_978
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------GC
AATCCCCTCTCCTCTTCG--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------
>reverse_1928
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------AAAGTGGCAAGTGAAGCATCA----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------
>forward_1633
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------TAACTCGCCAGCATCATGGG-----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------
>reverse_3780
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------TGTTGGGCTATCGAGCGAAG-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------
