>input_sequence_37228
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------------------------------------------------ATGCCTCCCCTCCTCACCTCACCCGCCTCCCT
CTCCTCCTCCCCGCTCCGCCTCGCCTCCCGCCTCGGCGGCGCCGCCCTCCGTCCGACCTCCCACCACCA---------CC
GTCGGTTCCTCGCCCCCGCTCCCCAAACCGCGCCGCGGGGCACCACCACCGGCGGCGGGTTCGCGGCGATGAGCTGGCTC
GGGAAGCTGGGGCTGGGGGGCGGGGGAAGCCCGCGCGCGTCGGAGGCGTCGGCGGCGCTGGCGCAGGGGCCCGACGAGGA
CAAGCCGGCGCCCGGGTGCGAGTTCGCGCAGTTCGGGGCCGGCTGCTTCTGGGGCGTGGAGCTGGTGTTCCAGCGCGTGC
CCGGGGTCACCCGCACCGAGGTCGGCTACAGCCAGGGCGCCTTTCATGACCCCACCTACGAGGACGTCTGCACCGGCGCC
ACCGGCCACAACGAGGTCGTCCGCGTCCAGTACGACCCCGCCGCCTGCAAGTACGACGACCTCCTCGACACCTTCTGGGC
GCGCCACGACCCGACCACGCCCAATCGCCAGGTCCGTCGCCATTCGGCCACACAGCCTGATTGCTGATCCCCTCAATTTT
GCT-TTTGATTCCTTTTCTGTGGCTTGGAGTGTGTGGATACGGAGTTTCAGGATTGGGGAAAA-TTTTCTGGACATTACA
AATTTATTACTGAGAAAATATCTTGAGAATTTTTTGGGAA--AATTGCTTAATTAGTTCTCTAG----ACAGAAACAATT
TATTGCAAAATTGACAAACAAAAATAGGAGGAAAAAAAATCGTCGCCTGAGAGATTCGAACTCTCGCGGGGAAACCCCAT
GTACTTAGCAGGCACACGCCTTAACCACTCGGCCAAAGCGACGCTTATGTTCTTTCTGTCGTCGGTTCTACACAGCAGGG
TGTGAACTTAAATATGCACCGTACAAACATTACTGACCCTTA----------ACGGATTTAGGCAACCCTATATACAGAG
TGTC---------------AGCCTACAACTGTGAATCGGGCAGCGAGCTAAGCATGCCTCGAGAGTAGTAGCAC-TTGGG
CATTTGATGTGTACATCCTGCGATTGTGTGTATAG---AGGTCTGCAAACCTGTTGCTT-CCCTTTACATTTTGCGCGGA
ATAGGCATAGCACTGGCCACCGGCAGTGTTCCTGACTTTTTTTCAGAGGAACTATCTAGCTAAACACTCTTCAG------
--------------------------------------------------------------------------------
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---------------------------------------------------------CGGTTAGTACCGCAGCGATATTG
GCATTTGTGCAGTTTTGTGTTAAGCTAATCAGTGTTATGAGAGTGGTGGTAATCTTGGCCGTAAGGCTCAGCTGCAGAAT
CCATTATACCTGTTGGGG-----------------------------------TCAGTCATTATACCTGTTGGTGCCCTT
TGTTAACTGATATTTCAAACTAGCTCTTAGCCTTTTGAACTATACTACAGAAGCTTTTCAA-------------------
---CCTCTGATGTGAACTTACTTGAATCTCTGAATAATATCCTCAAGCTCATTTGATTGCGAGCAATGGAACTTGCTTAT
GCATATTTGTACAAGCCCATTTCTCGGGGCCTCTTTGGTTCAAAGGATTCTCCTAGGAAATTTAGAGGATTGGAATCCTT
AGGATTTTTCCTACATTGGTGGTTTGATTCATAGGTTTGAAT--------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------CCCAGGAATTTTTCCTA
AGAATTCCTTTGAACTACATTCCATAGGAAATTTAGCATCCACTCACAAACCTCTTGGTAAGAGTCCTTTGTTCTTACTG
TGATGCTATCAAACAACT-AAAATCATGTAGGATTCAAATGGGCATGACATCACAATCGTATGTTTTTTT-CAATTCCTG
CGTTTTTGGAATTCTACTAATCAAAGAGGCCCTGTTTCCGACAAACGGCAACACAA---------TCAGTTCCTTTTCTT
AAATGTTCATTACTTGTGTTTCTGATCACATAAATTTCTGAAATGTGTGCACGCAGGGGGGCGATGTCGGAACCCAGTAC
AGGTCAGGGATCTACTACTACACATCGGAGCAGGAGAAGGCGGCGCTCGAGTCTATGGAGAAGCAGCAGAAGGTTCAGAA
CCGGAAGATAGTCACTGAGATCCTCCCCGCGAAGAGGTTCTACAGGGCGGAGGAGTACCACCAGCAGTACCTTGCGAAGG
GCGGTCGCTTTGGCTTCAAACAGTCCACGGAGAAGGGCTGCAACGACCCCATCCGCTGCTACGGATGA------------
--------------------------------------------------------------------------------
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---------------------------------------------------------------------------
>chr1A_1_TraesCS1A01G217300
GTTTCGTTCTTCAATAGAAAAATGCAAACAGATAGAATTTCTTCAGAAATAGGTAGAGCACAACTGTTTTCGCCTGGCAT
AACACAGCATACGTGGAGCCTCATCTGATCACAGGAAAGTCTTGCCTTGCCATCCAATCCACCACCAGCGGCGGTGTA--
-CAGGATTGCAGGTTTC--------------------------------AGCCTCTGTTTCCTCGGTGACTACGTGTCCA
ACAACGCCTTCGCATACCCGCATCGCATGATCCTCTCATCTCCTTATCC------------ACAAGAAACCCTTGCCCCG
GACGAAACTGCTTGCGCGTACCCGGTCAAAACTCTCGACGGTTCGCCACTCGTCTGCGATTTTG-TTCTTTCATCATCCA
TGGTGCCTGCAGATTTCATACCCAGTAGACAGTGACGGAAATCGGACTCATCGCTGTCCGGGTGTTGTTTTATGACTGAA
TGTGATGCTTTTGACGAACAGTAGCGAGCACTAGGTTTCATTCAATAAAGAAGAAGACCGTCAGAGCCCGGAAGTTACAA
TGAGAAATAGGTTGAGATGCACAAGTCACTACTAAATGTGATGTGATGTGTTGCGATGCAACCCGACGATGACTTTTACA
GCTTCGTGTTCAGTGAAATTCACCCTTTTATCGTGGTGGAAGTGAGCCAGTTTATGCGAATTTTTCGTTTGTTCTGAAAC
AGGCGGTGAAATAAATCCAAGAATAATGCGAGCACCAGGATTTGAACCCTGATGGGTTAGGAATACCACTGTTCACCTAA
CCAACTCAACCACAGGTTGATTTGCTAAAAAAAAAGATTTACGATTTAACGGGTGATGAAACCCGCA-------------
---------------AACCCGGCCCGGCAAGCAGGA--------CTCCATCATCAACAAGGCAGC----GAGGGAGGACG
TCGAGAAAAGAAAAGAGCAGCAACCAACCAGCCGAAGCGACGCAACGCAAACGCAACCGGGACTGACTGAGCCGACGAAG
CATCCGGGCCACGCCGCCACAAAAGGCAAAGGCAAGGAGAAAGCCCCGATGCCTCCCCTCCTCACCTCACCCGCCTCCCT
CTCCTCCTCCCCGCTCCGCCTCGCCTCCCGCCTCGGCGGCGCCGCCCTCCGTCCGACCTCCCACCACCA---------CC
GTCGGTTCCTCGCCCCCGCTCCCCAAACCGCGCCGCGGGGCACCACCACCGGCGGCGGGTTCGCGGCGATGAGCTGGCTC
GGGAAGCTGGGGCTGGGGGGCGGGGGAAGCCCGCGCGCGTCGGAGGCGTCGGCGGCGCTGGCGCAGGGGCCCGACGAGGA
CAAGCCGGCGCCCGGGTGCGAGTTCGCGCAGTTCGGGGCCGGCTGCTTCTGGGGCGTGGAGCTGGTGTTCCAGCGCGTGC
CCGGGGTCACCCGCACCGAGGTCGGCTACAGCCAGGGCGCCTTTCATGACCCCACCTACGAGGACGTCTGCACCGGCGCC
ACCGGCCACAACGAGGTCGTCCGCGTCCAGTACGACCCCGCCGCCTGCAAGTACGACGACCTCCTCGACACCTTCTGGGC
GCGCCACGACCCGACCACGCCCAATCGCCAGGTCCGTCGCCATTCGGCCACACAGCCTGATTGCTGATCCCCTCAATTTT
GCT-TTTGATTCCTTTTCTGTGGCTTGGAGTGTGTGGATACGGAGTTTCAGGATTGGGGAAAA-TTTTCTGGACATTACA
AATTTATTACTGAGAAAATATCTTGAGAATTTTTTGGGAA--AATTGCTTAATTAGTTCTCTAG----ACAGAAACAATT
TATTGCAAAATTGACAAACAAAAATAGGAGGAAAAAAAATCGTCGCCTGAGAGATTCGAACTCTCGCGGGGAAACCCCAT
GTACTTAGCAGGCACACGCCTTAACCACTCGGCCAAAGCGACGCTTATGTTCTTTCTGTCGTCGGTTCTACACAGCAGGG
TGTGAACTTAAATATGCACCGTACAAACATTACTGACCCTTA----------ACGGATTTAGGCAACCCTATATACAGAG
TGTC---------------AGCCTACAACTGTGAATCGGGCAGCGAGCTAAGCATGCCTCGAGAGTAGTAGCAC-TTGGG
CATTTGATGTGTACATCCTGCGATTGTGTGTATAG---AGGTCTGCAAACCTGTTGCTT-CCCTTTACATTTTGCGCGGA
ATAGGCATAGCACTGGCCACCGGCAGTGTTCCTGACTTTTTTTCAGAGGAACTATCTAGCTAAACACTCTTCAG------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------CGGTTAGTACCGCAGCGATATTG
GCATTTGTGCAGTTTTGTGTTAAGCTAATCAGTGTTATGAGAGTGGTGGTAATCTTGGCCGTAAGGCTCAGCTGCAGAAT
CCATTATACCTGTTGGGG-----------------------------------TCAGTCATTATACCTGTTGGTGCCCTT
TGTTAACTGATATTTCAAACTAGCTCTTAGCCTTTTG----------------------AACTATACTACAGAAGCTTTT
CAACCTCTGATGTGAACTTACTTGAATCTCTGAATAATATCCTCAAGCTCATTTGATTGCGAGCAATGGAACTTGCTTAT
GCATATTTGTACAAGCCCATTTCTCGGGGCCTCTTTGGTTCAAAGGATTCTCCTAGGAAATTTAGAGGATTGGAATCCTT
AGGATTTTTCCTACATTGGTGGTTTGATTCATAGGTTTGAAT--------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------CCCAGGAATTTTTCCTA
AGAATTCCTTTGAACTACATTCCATAGGAAATTTAGCATCCACTCACAAACCTCTTGGTAAGAGTCCTTTGTTCTTACTG
TGATGCTATCAAACAACT-AAAATCATGTAGGATTCAAATGGGCATGACATCACAATCGTATGTTTTTTT-CAATTCCTG
CGTTTTTGGAATTCTACTAATCAAAGAGGCCCTGTTTCCGACAAACGGCAACACAA---------TCAGTTCCTTTTCTT
AAATGTTCATTACTTGTGTTTCTGATCACATAAATTTCTGAAATGTGTGCACGCAGGGGGGCGATGTCGGAACCCAGTAC
AGGTCAGGGATCTACTACTACACATCGGAGCAGGAGAAGGCGGCGCTCGAGTCTATGGAGAAGCAGCAGAAGGTTCAGAA
CCGGAAGATAGTCACTGAGATCCTCCCCGCGAAGAGGTTCTACAGGGCGGAGGAGTACCACCAGCAGTACCTTGCGAAGG
GCGGTCGCTTTGGCTTCAAACAGTCCACGGAGAAGGGCTGCAACGACCCCATCCGCTGCTACGGATGAACGAGCCTGGTG
ACCTGACCAGCATGGAAGCACACAAGCAGCAATGTTATAGTCAAG-AATGCTGCCTGAATAATGGTGGATGTCAGCTGAA
TTTCACTACAGTTTTCCTAGCTTGTGCTGTTACCTAAATGCAAGGATTGTAAGAGAGAAGAAAGTTATTACCATTATACC
TTATTAGTGTTGAATTACCATTGTAATTTAGTGTTGAATTGCCATCGTACTTAGGATAAATTATGGCCTGAGTAATAAAG
TTCATTTTAATTACAAAAATGGTGTTATCAGAGTTAGCAGGCCTGGTTAGACCCTCTGTCTCAAATTACTTGTCACATAA
ATGA----------------------------------------------------------------------------
------------------------------------------------GTGAAATAGATAGAAATGGATGTATTTAGAAC
TAAAAATATGCCTAGATACAATAATTCCCGCGACAAGTAATTCAAGAC-GAGGAAGTAGTTACAACGCAGTTTGTTCATA
ACTGAAGGATGACAATATTACCATGGGTACTCGATTCGATCCGTATGGTTAGGGCATGGGCATATTTTTGGCAATGCCCA
AACCCTATCCAACTAGTCATGTGTACGCCCGAACACTACACAGTTATCTTATACTAGTTTTTTACTTCACAAGCGGAGGA
GCCCCTG-CCATGCACCACAGGTAGCCACACGCTGACGCACATATCGGATCGCTAATCTCTACGACATATGACAGTTCGT
TCGCCTCCTCATCTCCGCAGGCAGCAGCGATCATATCGCTCCAGGACTCCAGGCTTCAGCCTCCAAGATCAGAAGTGGAG
AAGGTAAGTTGGGAAGGGAATGCCGAGGCAGGCAGGTGCCGATCCAAGGACACATTTGATGAGCGGCAACAACACAAGGG
GAAAAGGTAATTTATTTTCACATAGATTAGTACATGCCTTTAAAAATTATAGAAGTATAATCATACAAACTATAGGTGTT
AATCATCACTTATAACATTTCCAATTATTTATTCGTGCTTGTGTAGGCATGAAGTGGAAGAGAGAATCCGTTCAT
>chr1B_4
TCGTTCTTGAAT-ATAGAAAAGTACAAACACACAGAATTTCCTCAGAAATACGTAGCGCACAAGTGTCTTCGCGTGGCAT
GACACAGCATACGTGGAGCCTCATCTGATCACAGGCAAGGCTTGCCCTGTCATCCAATCCACCACCACCAGCGGTGTAGT
ACAAGATTGCAGGTTTCAGCTTCTATTTCCTCACTTTTCGCAAAAAAAAAGCTTCTATTTCCTCACTGACTACGTGTCCT
ACAACGCCTTCGCATACCCGCATCGCATGATCCTCTCATCTTCTTATCC------------A------------GCCCCG
GACGAAACTGCTTGCGCGTACCCGGTCAAAACTCTCGACGGTTCGCCACTCGCCTTCAATTTTGATTCTTTCATCATCCA
TGGAGCCTGCAGATTTCATATCCAGTAGACAGTGACTGAAATCGGACTCATCGCTGTCCGGGTGTTGTTTTATGACCGAA
GGTGATGTTTTTGACCAACAGTAGCGAGCACATATG--------------------------------------------
-----------------------------------ATGTGATGTGATGTGC-----TGCAACCCGACGATGACTTTTACA
GCGTCGTGTGCAGCGAAATTCACCCTTTTATCGTGGTGGAAGTGAGC--------GCAAATTTTGCGTGTGTTCTGAAAC
AGGCGGTAGTAAAAGTGCTACGA---------------------------------------------------------
--------------------------------------TTACGATTTAACGGGTGATGAAACCCGCGA------------
------------GCGAACCCGGCCCGACAAGCAGGA--------CTCCATCATCAACAAGGCAGCGAGGGAGGGAGGACG
TGGAGAAAAGAAAAGAGCAGCAACCAACCAGCCAAAGCGACGCAACGCAAACGCAACCGGGACTGACTGAGCCGACGAAG
CATCTGGGCCACGCCGCCACAAAAGGCAAGGCAAGG--GAAAGCCTCGATGCCTCCCCTCCTCACCTCACCCGCCTCCCT
CTCCTCCTCCCCCCTCCGCCTCGCCTCCCGCCTCGGCGCCGCCGCCCTCCGTCCCACCCCCTCCTCCTCGTCCCGCAGCC
GTCGTTTCCTCGCCCCCA---CCCAAACCGCGGCGCCGGGAACCACCACCAGCGGCGGGTTCGCGGCGATGAGCTGGCTC
GGGAAGCTGGGGCTGGGCGGCGGGGGAAGCCCGCGCGCGTCGGAGGCGTCCGCGGCGCTGGCGCAGGGGCCCGACGAGGA
CAAGCCGGCGCCCGGGAGCGAGTTCGCGCAGTTCGGGGCCGGCTGCTTCTGGGGCGTGGAGCTGGTGTTCCAGCGCGTGC
CCGGGGTCACCCGCACCGAGGTCGGCTACAGCCAGGGCGCCTTCCACGACCCCACCTACGAGGACGTCTGCACCGGCGCC
ACCGGCCACAACGAGGTCGTTCGCGTCCAGTACGACCCCGCCGCCTGCAAGTACGACGACCTCCTCGAAACCTTCTGGGC
GCGCCACGACCCGACCACGCCCAATCGCCAGGTCCGTCGCCACTCGGCCACACAGCCTGATTGCTGATCCCCTCAATTTT
GCTTTTTGATTCCTTTTCTGTGGCTTAGAGTGTGAGGATATGGAC-TTCAGGATTGGCGAAATTTTTTCTGGACATTACG
AATTTATTACTGAGAAAATATCTTTAGAATTTTTGGGAATATAATTGCTGAATTATTTCATTATTAGAACAGAAACAAAT
TATTGCAAAATTGACAAATAAAAAAAAG-----------TCGTCGCCTGAGAGATTCGAACTCTCGCGGGGAAACCCCAT
GTACTTAGCAGGCACACGCCTTAACCACTCGGCCAAAGCGACGTTTGCGTTCTTTCTGGCGTCAGTTCTACACAGCAAGA
CGTGAACTAGAACATACACCTCAAACTCATTATCGAACCTTGTCATTTTTATACGGATTTGGGCAATCTTTTACATAGTG
TCAGTGCACCTGTGTTACAAGCCTACATCCGTGAACCCGGCAGCGAGCCAAGCACGCCCGGAGAGCAGTAGCACTTTGGG
CATTTGATGTGTACAGTCTGCGATTGTGTGTATAGTAGAGGTCTGCAAACTTGTTGTCCACCTTTTACATTTTGAGCGGA
ATAGGCATAGCATCGGACACTAGCAGTGTTCCTGACTAATTTTCAGAGGAACTACTTAGCTAAACACTCTTTAG------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------------------------CGGTTAGTACCACAGTGGTATTG
TCATTTGTGCAGTTTTGCGTTAAGCTAATCAGTGTCACGAGAGTGGTGGTAATCTTGGCTGTAAGACTCAGCTGCAGAAT
CCATTTGGTATGAAGAATTTTACTAACTGTATGGAATCTGATACCTTGACTGATCAGTCATTATGCCTGTTGGTGCCCTT
TATTAAGTGATATTTCAAACTAGCTCGTAGCCTTTTG----------------------AA-------------------
---CCTCTGATGTGAACTTACTTGAATCTCTGAATATTACCCCGAAGCTCATTTGATTGCGAGCAATGGAACTTGCTTCT
GCACATTTGTATAAGCCCATTTCTCAGGGCCTCTTTGATTCAAAGGATTTTCATAGGAATTTTAGAGGATTGGAATCCTC
ATGATTTTTCGTACGTTGGTGGTTTGATTCCTAGGGTTGATTCCTAGGATTTGTTTCCTAAGGATTCTTTGGTTCAAAGG
ATTTTCATAGGAATTTTAGAGCATTGGAATCCTTAGGATTTTTCCTAAGT------------------------------
-------------------------------------TGGTCGTTTGATTCATAGGGTTGAATCCTAGGAATTTTTCCTG
ATGATTCCTTTGTAC----TTCCATAGGAATTTTAGCATCCACTCACAAACCTCTTGGTAAGAGTCCTTTGTTTTTACTG
TGATGCTATCAAACAAACCAAAATCCTGTAGGATTCAAATGGGTATGACATTACA-GCGTATGTTTTTTTTCTATTCCTG
CGTTTTTGGACTTCTGCTAATCAAAGAGGCCCTG-TTCCAACAAACGGCGACACGTCAGTTCACGTCAGTTCCTTTTCTT
AAAGGTTCATTACTTGTGTTTCTGATCATATACATTTCTGAAATATGTACATGCAGGGGGGCGACGTCGGAACCCAGTAC
AGGTCAGGGATCTACTACTACACATCAGAGCAGGAGAAGGCGGCGCTCGAGTCTATGGAGAAGCAGCAGAAGGTTCAGAA
CCGGAAGATAGTCACTGAGATCCTCCCCGCGAAGAGGTTCTACAAGGCGGAGGAGTACCACCAGCAGTACCTTGCGAAGG
GCGGTCGCTTTGGCTTCAAACAGTCCACGGAGAAGGGCTGCAACGACCCCATCCGCTGCTACGGATGAACGAGCCTGGTG
ACCTGACCAGCATGGAAGCACACAAGCAGCAATGTTATAGTCGAG-AACGCTGCCTGAATAATGGTGGATGTCAGCCGAA
TTTCACTACAGTTTTCCTAGCTTGTGCTGTTACATACA---AAGGATTGTAAGAGAGAAGAAAGTTATTACCATTATTCC
TTATTAGTGTTGAATTACCATTGTAATTTAGTGTTGAATTGCCATCATCCTTAGGATAAATTATGGCCTGGGTAATAAAG
TTCATTTTAATTACGAAAATGATGTTATCAGAGTTAGCAGGCCTGGTTAGACCCTCTGTCCCAAATTACTTGTCACATAC
TTCCTCCGTCCGAAAATACTAGTCATCAAACTGGACAAAAAGAGATGTATCTAGAACTAAAATACATCTAGATACATTCC
CTTTTATTTATTTTGATACAAGTATTTTCGAACGGAGGGAGTAGATGGGTGAAATGGGTAGAAATAGATGTATTTAGAGC
TAAAAATATGTCGAGATACAACCATTTCCGCATCAAGTAATTCAAGACGGAGGGAGTAGTTACAACGCGGTTTGTTCAAA
ACTAAAGGATGGCAATATTACAGTGGGTACTCGATCCAC-----ATGGTTAAGGTATGGGCATATTTTTGGCAATGCCCA
AACTCTATCCAGCTAGTGATGTGTACGCCTGAACCCTACCTAATTATCTTATATATATATTTTACTTCGCAAGCGGAGGA
GCCCCTGACCATGTATCATAGGCAGCCACACACT----------------------------------------------
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---------------------------------------------------------------------------
>chr1D_34
AGAAT----------------------------------TCTTCAGAAATACGTAGAGCACAAGTGTTCTCGCGTGGCAT
CACACAGCATACGTGGAGCCTCATCTGATCACAGGAAAGTCTTGCCCTGCCATCCAATCCACCACCACCAGCGCTGTA--
-CAGAC-TGCAGGTCGC--------------------------------AGCTTCTATTTCCTCACTGACTACGTGTCCT
ACAACGCCTTCGCATACCCGCATCGCATGATCCTCTCATCGTCTTATCCACAACAAACACTA------------GCCCCG
GACGAAACTGCCTGCGCGTACCCGGTCAAAACCCTCGAAGGTTCGCCACTCGCCTGCGATTTTG-TTCTTTCTTT---CA
TGGAGCCTGCAGATTTTATATCCACTAGACAGCGACTGAGATCAAACTCACGGCTGTCAGGGTGTTGTTTTATTACTGAA
TGTGATGGG-----------------------------------------------------------------------
--------------------------------------------------------TGCAACCCGATGATGACTTTTACA
GCATGTTGT---------TTCACCGTTTTATCGTGTTGGAAGTAAAC--------CAAATTTATGTAAAACAAGTCGTGG
TAACATAGTACTGCGATAAACGGG--------------------------------------------------------
--------------------------------------------------------TGAAACCCGCGAACCCGGCCCGGC
AAAAAAAAACCCGCGAACCCGGCCCGGCAAGCAGGAGTGCAGGACTCCATCATCAA-AAGGCAGC----GAGGGAGGACG
TGGAGAAAAGAAAAGAGCAGCAACCAACCAGCCAAAGCGACGCAACGCAAACGCAACCGGGACTGACTGAGCCGACGAAG
CATCCGGGCCACGCCGCCACAAAAGGCAAGGCAAGG--GAAAGCCTCGATGCCTCCCCTCCTCACCTCCCCCGCCTCCCT
CTCCTCCTCCCCCCTCCGCCTCGCCTCCCACCTCGGCGGCGCCGCCCTCCGTCCTACCTCCCACCACCA---------CC
GTCGGTTCCTCGCCCCCGCTCCCCAAACCGCGGCGCGGGGCCCCACCACCAGCGGCGGGTTCGCGGCGATGAGCTGGCTC
GGGAAGCTGGGGCTGGGGGGCGGGGGAAGCCCGCGCGCGTCGGAGGCGTCGGCGGCGCTGGCGCAGGGGCCCGACGAGGA
CAAGCCGGCGCCCGGGAGCGAGTTCGCCCAGTTCGGGGCCGGCTGCTTCTGGGGCGTGGAGCTGGTGTTCCAGCGCGTGC
CCGGGGTCACCCGCACCGAGGTCGGCTACAGCCAGGGCGCCTTCCACGACCCCACCTACGAGGACGTCTGCACCGGCGCC
ACCGGCCACAACGAGGTCGTCCGCGTCCAGTACGACCCCGCCGCCTGCAAGTACGATGACCTCCTCGACACCTTCTGGGC
GCGCCACGACCCGACCACGCCCAATCGCCAGGTCCGTCGCCACTCGGCCACACAGCCTGATTGCTGATCCCCTCAATTTT
GCC-TTTGATTCCTTTTCTGTGGCTTGGAGTGTGTGGATACGGAGTTTCAGGATTGGGGAAAA-TTTTCTGGACATTACA
AATTTATTACTGAGAAAAAATCTTGAGAATTTTTGGGGGA--AATTGCTTAATTAATTCTCTAG----ACAGAAACAATT
TATTGCAAAATTGACAAACAAAAATAGGAGGAAAAAAC-TCGTCGCCTGAGAGATTCGAACTCTCGCGGGGAAACCCCAT
GTACTTAGCAGGCACACGCCTTAACCACTCGGCCAAAGCGACGCTTATGTTCTTTCTGTCGTCAGTTCTACACAGCAAGG
TGTGAACTTAAATATGCACCGTACAAACATTACCGAACCTGA----------ACGGATTTAGGCAACCTTATATACAGAG
TGTC---------------AGACTACGACTGTGAATCGGGCAGCGAGCTAAGCACGCCCGCTGAGTAGTAGTACTTTGAG
CATTTGATGTGTACAGTCCGCGATTGTGTGTATAGTAGAGGTCTGCAAACTTGTTGCCCACCTTTTACATTTTGGGCGGA
ATAGGCATAGCACCGGACACTAGCAGTGTTCCTGACTAATTTTCAGAGGAACTACTTAGCTAGACACTCTTTAGGGCTCC
TTTGATTCAGAGGAATTCCATAGGATTTTTGGAGGGTTAGAATCCTTAGGAATTTTTCCTACATTGGTCGTTTAATTCAT
AGGATTGAATCCTATAGGAATTATTCCTATGGAATCATGTGTACTACATTTCATTGGAAATCTAGCATCCACTCCAACCT
CTTTTTTCACTTCCTTTGTTTTTCCCGTGGCATCAAACATTCTGTGCTAATCCTATGAGATTCAATGGACATGCCACTCC
AATCCTTTCTTCCTATTCCCGCGTTTTGAGAATCCTACGAATCAAAGAGGGCCTTAGCGGTTAGTACCATAGTGGTATTG
TCATTTGCGCAGTTTTGCGTTAGGCTAATCAGTGTTATGAGAGTGGTGGTAATCTTGGCTTTAAGGCTCAGCTGCAGAAT
CCATTTGGTACGAAGAGTTTTACTAACTCTATGGAATCTGGCACCTTGACTGATCAGTCATTATGCCTGTTAGTGCCCTT
TGTTAACTGATATTTCAAACTAGCTCGTAGCCTTTTG----------------------AA-------------------
---CCTCTGATGTGAACTTGCTTGAATCTCTGAATGATATCCTGAAGCTCATTTGATTGCGAGCAATGGAACTTGCTTCT
GCACATTTGTATAAGCCCATTTCTCAGGGCCTCTTTGATTCAAAGGATTTTCTTAGGAATTTTAGAGGATTGGAATCCTC
ATGATTTTTCCTACGTTGGTGGTTTGATTCATAGGGTTGAATCCTAGGATTTGTTTCCTAAGGATTCTTTGATTCAAAGG
ATTTTCATAGGAATTTTAGAGGATTGGAATCCTTTGGATTTTTCCTACGTTGGTCGTTTGATTCATTTTTTTTAGAAAGG
AGGATGACCCCCGGCCTCTGCATCTGGGCGATGCATCTGGTCGTTTGATTCATAGGGTTGAATCCTAGGAAATTTTCCTA
ATGATTCCTTTGTACTACATTGCATAGGAATTTTAGCATCCACTCACAAACCTCTTGGTAAGAGTCCTTTGTTTTTACTG
TGACGCTATCAAACAAACCAAAATCCTGTAGGATTCAAATGGGTATGACATTACAAGCGTATGTCTTTTT-CTATTCATG
CTTTTTTGGACTTCTGCTAATCAAAGAGGCCCTGTTTCCGACATACGGCGACACG----------TCAGTTCCTTTTCTT
AAAGGTTCATTACCTGTGTTTCTGATCATATACATTTCTGAAATATGTACATGCAGGGGGGCGACGTCGGAACCCAGTAC
AGGTCAGGGATCTACTACTACACATCGGAGCAGGAGAAGGCGGCGCTCGAGTCTATGGAGAAGCAGCAGAAGGCTCAGAA
CCGGAAGATAGTCACTGAGATCCTCCCGGCGAAGAGGTTCTACAGGGCGGAGGAGTACCACCAGCAGTACCTTGCGAAGG
GCGGTCGCTTTGGCTTCAAACAGTCCACGGAGAAGGGCTGCAACGACCCCATCCGCTGCTATGGATGAACGAGCCTGGTG
ACCTGACCAGCATGGAAGCACACAGGCAGCAATGTTATAGTCAGATAACGCTGCCTGAATAATGGTGGATGTCAGCTGAA
TTTCACTACAGTTTTCCTAGCTTGTGCTGTTACCTAAATGCAAGGATTGTAAGAGAGAAGAAAGTTATTACCATTATACC
TTATTAGTGTTGAATTACCATTGTAATTTAGTGTTGAATTGCCATCGTACTTAGGATAAATTATGGCCTGGGTAATAAAG
CTCATTTTAATCACAAAAATGGTGTTATCAGAGTTAGCAGGCCTGGTTAGACCCTCTGACCCAAATTACTTGTCACATAA
ATGGTCACA-----------------------------------------------------------------------
-----------------------------------------TAAATGGGTGAAATGGATAGAAATGAGTGTATTTAGAAC
TAAAAATATGTCTAGATACAACTATTCCCACGATGGGTAATTCAGGACGGAGGGAGTAGTTACAACGCGGTTTGTTCAAA
ACTAAAGTATTGACA-----------------------------------------------------------------
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>SNPs
SSS-SS--SSSSS--------S-S------S-S------------------S-----------S---------S------
S---------------------------------------------S--------------------S-S----------
----------------------------------------------------S---S-------SS-------------S
-----------------------------------------S--------------------SSSSSSSSSSSS------
----------------------------------------------------S---------------------------
---S----------------S---------------S-------------------------------------------
-------S-------S---------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------------SSSSSS------------------------
--S------S---S---------------------------------SSSSSSSS--S------S---S-----------
--------S-----S-S---SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------------------------S-------------
--------------------------------------------------------------------------------
-S-------------------------------S----------------------------------------------
-----------------------------S-SS-S-SS-------S----------------------------------
------------S-----------------------------------------S-------------------------
--------------------------------S-----------------S-----------------------------
--------------------------------------------------------------------------------
----------------S---------------------------------------------------------------
-------------------------------------------S--S---------------------------------
--------------------------------------------------------------------------------
------------------------------------------S-------------------------------------
--------------------------------------------------------------------------------
----------------------------------S--------------------S------------------------
-------------------------------------SS-----------------------------------------
---------------------------------------------------------------S-------------S--
---------------------------------S--S-------------------------------S-----------
------------------------------------------------------S---SS--------------------
---------------SS---------------------------------S------SS---S-----------S-----
-------------S--S---SS---------------SS---------------SS---------------S--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------S---S-S-----
S----------------S-----------------------------------------S--------------------
-----SSSSS--SS-S-S----------------------------------------------S---------------
--------------------------S----------------------------------SSSSSSSSSSSSSSSSSSS
SSS----------------------------------------S----------------------------------S-
---S-------S-------------S-----------S-----------S--S------S-------------------S
-S------------S--------------------S--------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------S--------------
-SS---------S-----------------S------------------------------------------S------
----------------SS-------S-----------------S-------S----S---------------S-------
----------S----S---------------------------------S----SS------------------------
---S------------------------S---S-----------S---S--S------------S---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------S-------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------S---------
------------------------------------------------------------S-------------------
---S----------------------------------------------------------------------------
-------------------------------------------------------S------------------------
----------S----------SS------------------------------S--------------S---------S-
---S-------S---------SS------------S-SSSSSSS-------S--S-------------------------
---S-------S-----S-----------S----S----SS-S----------SSSS-S---------S-----------
-------------S-S--S---S--------S--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_765
--------------------------------------------------------------------------------
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-------------------------ATGCGAGCACCAGGATTTGA-----------------------------------
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>reverse_1879
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------ATCGTCGCCTGAGAGATTCG----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------
>forward_767
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------GCGAGCACCAGGATTTGAAC---------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------
>reverse_2235
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------CGCGGA
ATAGGCATAGCACT------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------
>forward_2223
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------CTGCAAACCTGTTGCTTCCC-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------
>reverse_4768
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------GGACACATTTGATGAGCGGC-------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------
