>input_sequence_37223
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---------------------------------------------------------------------ATGCTGCTTGG
GTTGTGCTCCGCCCTGCGCTCGCGTGCCCTCCTCCTCCCTCTGACCCCGCCGCCTCGT------ACGGCCACCCTTCGCC
GCCGGACTTGGCTGCGGGCCACCTCCTCCTTGTCATCTCCGCCGTCGCCGGAGATGGAGGCGTCGGCGTACAAGTTCGGG
CCCTACAGGATCGACGCGAGGGAGGTCTTCCACGCCACGCCCCTCTCATACGCCATGGTCAACCTACGCCCCCTCCTCCC
TGGTAAACATCTCTATGATTGCCCCAACTTTCCCTTGCCTAATTTATGTTCAATTTTCACTTCCACCTCACCTCAGAATC
ACAGTGTATTTCTAGGAATTGTTTGTGATTCTATAA--------TTTTTTTGTCTGACGGAGATGCCAATGCGGTTGATG
GTACTCCCTCTGTAAACTAATATAAGAGCGTTTAGATAGTGATCTAAACGCTCTTATATTAGTTTACAGAGGGAGTAGAT
TATAAATCACACATTAGGTTTCCAGCGCTAGCACAATTTTTTTCGGAC-AATTTTGTA----------------------
-----------------ATACTTGGTGCAGTGAATAATCGCAAGTCTGGCTCACTATTATCAGCTATGTCGTCGGAGTAG
CACAATGACATTTAAACCCTGACGATGTTGTACTAACATTGTATGTATTTGTAGTATAGCAGCTATTTATGATTACGACT
TTATAGATCGCGGATATACTATTTGTGCTATATTGACATGTCCCAATCTTACACTGCAGGTCATATCCTTTGTTTTGGCA
TACTCGTCGCCAGGATTTACAGTTAAACACTGCCGGCAAGCCTGGAATCTCGT-TTGTTGTCAGACTGTTCATACACTTT
GTTTCACTTGTTTCTGAAG--AG--TGTCCAAGGTTCAGACACATACAGA---AAGCACAGATCAGAATCAAAAGAATGA
AATTTGTATG-----------------------------------------------GTATATCACTCTTTCATTCTGCA
CTGATCTC--------TAAAAATGCATGGCTAATGTAAATCTGAATATAAAGG-ATGTCAAGAAATTTATGCTAGGGTTA
GCTATTTATATAAGTGAATGGTTCATATAAAAATAGCCAAATGGTTATCTCTTGCTGGAATCTGTTTATACTTGATGGAC
TCGTGAGTGATGATAGT---------------------------------------------------------------
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--------------------------GTCATCTTTTTATGAAATATTATGTTTACTATTATGC---CCATCACTTTCTGC
ACCGACAAGTTCACCCAAAAAGCTTAGCCTCTCGAGGAAAGGCAGGAAATGTACTCATACTGCAACATTTACTGTGCTAC
ATATACTGATGGTATAATAC---------TTTAACCCGAGGTAGCTATCCATTATTACCCCGTTTGCTGTCCTGTGGTTC
ACAGCTTTCATAGTTCAAACTTCAAA--CTGTAAAACGTCTACTTACATTGTATAGTTTGGTTATACATATTTTTTCCTT
AACAAAACATACATGTCCTTGTGTGCCCCAAGCGTGAAGTGAAACGCTTTACTGATCTAAGTACTGATGAGACAAGTGAT
TTATGGGTCACTGCAAAGGAAGTTGGTGTACGGCTTGAGCAGTACCACAAAGCTTCTTCGCTTACATTTGCGATTCAGGT
CAACTCTCTTTCTCTCTATATATGTACT-AATAGCTTATGCTTCCAAA-T-TTATATAATTAGTTCATCCAATTGAAAGC
TCATGATGTTTGGATGCTGCTACTGGGGTCCAGAACAAAATAGATCAGGCTAATCACCTAAATTACACTTACACTGCCAT
ATGAGGTTCCTGTCTGTTCTTTGGACTTGTACTCCAGATCTGCTGCTGATTTGATTACCTTTCCC-CCTTTTACCTTTAA
CTAATAACCTATGAATGAAAAAGAAGCATTTCCTTATTGATAGCTTTTTGGTACAGGATGGTCCTCAAGCTGGCCAAACA
GTCCCGCACGTCCACATCCATGTGATCCCCAGGAAGAAGGGAGATTTCGAAAATAATGATGAAATATATGACGCGGTTCG
TTTACCACCCGTTTTTCCATCCATATAA-CTTCTTATGATTTTTTT-CATTAAATCCTAGTACCATTTTTCTTTGTAACA
GATAGATGTGAAAGAAAAAGAAATGAAGGAAAAGCTTGATCTGGATGTTGAAAGAAAAGATAGAACCATGGAAGAAATGA
GTCATGAGGCTAACGAGTACCGTGCTCTTTTCTCCTAG------------------------------------------
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>chr5B_1_TraesCS5B01G143800
AGTTTGTAGAAGGTAGGTCGAGGTTGCCATGGATCCTTCCAGGTTGTAACTTGTTTGTCATTGTTGACGCGTCATACAAT
ACCCTTTTTTAGGAGGGTCGGGCCATGATGAATAATGTACCATGTCGATGATGCGGTCCTTGCAAAATTA--GTGTCTTC
ATAAACACCGTTAGGATAGTA------CTTCACTTGGAAGACCATGGCATACAACGAGTCCGGCCAAGTTAGGAGCCGCC
AAGCTTGCCTTTGCGAGCAAGGTTTGGTGAATCAGGAAGAAGCCACAGAA-CCCTAGTCCTCCCTTGCAGTTTGGCTTAC
TTATATTTTCTCAAGACATC-----------CCTTTTATCTTTCTTTGAACCCCACCAAAAATTACAAACTAGCCCTGAC
AGGTCACACCCAGAAAGGGGCAACTTGAATACACCCATAATGTATGTTGGTATCA-CTGAGCGACTAACTTTGTTTCAAC
AAAATACAAGAACATTATTTCATTAACTTCAATGACAAAATGTAGTTGTATTTGTAATTCATACACTGGTGCGTCTGCCC
CTTGACGAAGACCAACAAAGTTATTTCCGTGTAATCTGAGGAGCAACATTATCCTATCTTTGCCGTTGGTTTGTCTAGTT
TACGACGAAAGTCAGATGTATGAACATACAAGATT-------GAACAAAAACTAGATTTATCGAAACTTTTGAAATCTAC
CTACACTAGTGTAGTATCAAAAATATTCAAAAATTCTTATATGATGAGATGGAGGGGGTATGAATTTGGCTGCGGGCCTT
GGCTGTTCGCAGCCCAGCCGCTACTAAGATGGGCTAACATGGGCAACAAAGGCCCACAGCTATCACCTTCCCCTCTACTC
TGCTAAATACGCGCTTAGTCTGTCTATTGGTCGCCATGTTTGGCTGCTCCAACCTCCAAACTTGAGATGTATTCCTCAGA
ACATTCTTGAGTAATAAAGCGTGTGTTTTAGCCTCAAAAAAAAAAAAAAAA-ACTGTTGCCTGCTGCTGATGCTGCTTGG
GTTGTGCTCCGCCCTGCGCTCGCGTGCCCTCCTCCTCCCTCTGACCCCGCCGCCTCGT------ACGGCCACCCTTCGCC
GCCGGACTTGGCTGCGGGCCACCTCCTCCTTGTCATCTCCGCCGTCGCCGGAGATGGAGGCGTCGGCGTACAAGTTCGGG
CCCTACAGGATCGACGCGAGGGAGGTCTTCCACGCCACGCCCCTCTCATACGCCATGGTCAACCTACGCCCCCTCCTCCC
TGGTAAACATCTCTATGATTGCCCCAACTTTCCCTTGCCTAATTTATGTTCAATTTTCACTTCCACCTCACCTCAGAATC
ACAGTGTATTTCTAGGAATTGTTTGTGATTCTATAA--------TTTTTTTGTCTGACGGAGATGCCAATGCGGTTGATG
GTACTCCCTCTGTAAACTAATATAAGAGCGTTTAGATAGTGATCTAAACGCTCTTATATTAGTTTACAGAGGGAGTAGAT
TATAAATCACACATTAGGTTTCCAGCGCTAGCACAATTTTTTTCGGAC-AATTTTGTA----------------------
-----------------ATACTTGGTGCAGTGAATAATCGCAAGTCTGGCTCACTATTATCAGCTATGTCGTCGGAGTAG
CACAATGACATTTAAACCCTGACGATGTTGTACTAACATTGTATGTATTTGTAGTATAGCAGCTATTTATGATTACGACT
TTATAGATCGCGGATATACTATTTGTGCTATATTGACATGTCCCAATCTTACACTGCAGGTCATATCCTTTGTTTTGGCA
TACTCGTCGCCAGGATTTACAGTTAAACACTGCCGGCAAGCCTGGAATCTCGT-TTGTTGTCAGACTGTTCATACACTTT
GTTTCACTTGTTTCTGAAG--AG--TGTCCAAGGTTCAGACACATACAGA---AAGCACAGATCAGAATCAAAAGAATGA
AATTTGTATG-----------------------------------------------GTATATCACTCTTTCATTCTGCA
CTGATCTC--------TAAAAATGCATGGCTAATGTAAATCTGAATATAAAGG-ATGTCAAGAAATTTATGCTAGGGTTA
GCTATTTATATAAGTGAATGGTTCATATAAAAATAGCCAAATGGTTATCTCTTGCTGGAATCTGTTTATACTTGATGGAC
TCGTGAGTGATGATAGT---------------------------------------------------------------
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--------------------------GTCATCTTTTTATGAAATATTATGTTTACTATTATGC---CCATCACTTTCTGC
ACCGACAAGTTCACCCAAAAAGCTTAGCCTCTCGAGGAAAGGCAGGAAATGTACTCATACTGCAACATTTACTGTGCTAC
ATATACTGATGGTATAATAC---------TTTAACCCGAGGTAGCTATCCATTATTACCCCGTTTGCTGTCCTGTGGTTC
ACAGCTTTCATAGTTCAAACTTCAAA--CTGTAAAACGTCTACTTACATTGTATAGTTTGGTTATACATATTTTTTCCTT
AACAAAACATACATGTCCTTGTGTGCCCCAAGCGTGAAGTGAAACGCTTTACTGATCTAAGTACTGATGAGACAAGTGAT
TTATGGGTCACTGCAAAGGAAGTTGGTGTACGGCTTGAGCAGTACCACAAAGCTTCTTCGCTTACATTTGCGATTCAGGT
CAACTCTCTTTCTCTCTATATATGTACT-AATAGCTTATGCTTCCAAA-T-TTATATAATTAGTTCATCCAATTGAAAGC
TCATGATGTTTGGATGCTGCTACTGGGGTCCAGAACAAAATAGATCAGGCTAATCACCTAAATTACACTTACACTGCCAT
ATGAGGTTCCTGTCTGTTCTTTGGACTTGTACTCCAGATCTGCTGCTGATTTGATTACCTTTCCC-CCTTTTACCTTTAA
CTAATAACCTATGAATGAAAAAGAAGCATTTCCTTATTGATAGCTTTTTGGTACAGGATGGTCCTCAAGCTGGCCAAACA
GTCCCGCACGTCCACATCCATGTGATCCCCAGGAAGAAGGGAGATTTCGAAAATAATGATGAAATATATGACGCGGTTCG
TTTACCACCCGTTTTTCCATCCATATAA-CTTCTTATGATTTTTTT-CATTAAATCCTAGTACCATTTTTCTTTGTAACA
GATAGATGTGAAAGAAAAAGAAATGAAGGAAAAGCTTGATCTGGATGTTGAAAGAAAAGATAGAACCATGGAAGAAATGA
GTCATGAGGCTAACGAGTACCGTGCTCTTTTCTCCTAGATGTATTTCTTACAAACCGTTTTCTAATTTTTCACTTAGTGT
TTTCACAGAAATAAACTTCTGGACTGTTTGTTCTGCATTGTTTTTCAAGAGT--AGCAATGAATATTTTATTTTCCACTG
ACCTGGTGATGTCGAGTCTCAACTGACGAGTCTGAGGTGGTGGCTTACTTATGTA-------------------------
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-GTATATTGATCCCAAACATGCATGAAAACACACAGGCA-------TCCGAGCCTTACAATTCCTGCGTAGTTTCTTAGT
TTGCAGGGTTCAATACATGAAAAAAGTATTCTGGGCAAAGTATTTATTTATGAGATGCACAAGATAGTGGCTAGATTATA
GC-AAAATGATATATGGTGTTTAGACATTCCATTGCTGGGG-TGTAATAGCTTCCTAGGCATGGAGCATTAGCTGTTTTA
CTTCTCAACCCAAAATGCATTATTTGTCTTGTGTTTGTGATCAT------------GAAATCTGCTATTATCAGTAATGA
CCATACTATAGGCAACAGCGCTAGCATGGACCTAGCATGATCTTTTAATATGTGGACGACACTGAACTAGGCGTCTTGCA
GATTGTTCC--------------------------------------------------------------------AAG
GATATACTAAGAGTTGCAATTCTAAACTGGCATCAGGAATTAATATCAACGAACCGGACGCATCATTTAGTTTCAGTTTA
CACCTTGGCTTGACATTATCTGTACCATTTAAGTTAGCCAAAGCCAATTTTTCTCCATATTACTTTGGAAAGTGCATTAA
GGGT-----TATACCGCACAGAGGTGATATAGTTTATTTGGGTGGGAGTATTCTGCTCATTTTAAAGCCTAAGATGTTAC
AGCTGATACATTGCACAGCATCAGCAAAACT-AATTTGTAATACTCATTTTAACATATTCCTGATGGGGACGGGAAGA--
----------GTATGCGATTAAGTGCTTATGGCCTAAAGTTATATTCCCTGAGAC-GGCTAAGCATTTAGCTTGTGCTTT
GCCGAAAGTGGACTCTTCACTGTTATAAAATGTTTATTAGCAAAACAGTTCAGT
>chr5D_1
AGTGTGTAGGAGGTAGGTCGAGGTCGCCATGGATCCCTCGAGATCCTAACTTGTTTGTCATTGTTGACGTGCCATTCAAG
ACCTCTTTTTAGGAGGGTTGGGCCACGATGAATACTGTACCATGCCGATGAGGCGGTCCTTGCAAAATCA--GT--CTTC
AAAAACATCGTTAGGATAGTA------CTTCACTTAGAGGACTATGGCA-------AGTCCGACCAAGTGAGGAGCTGCC
AAGCTTGCCTT-GTGAGCAAGGCTTGGTGAAACAGAAGGAAGTCACAG-A-CCCTAGTCCTCCCTTGCAGTCGGGCTCAG
-TATCTTTTCTCAAGACATCGAGTGGGACTTCCTTTTATCTTTCTTTGAACCCCACCAAAAATTACGAACGAGCCATGAC
AGATCACGCACAGAGAGGGGCAACTTGAATACACCCATAGTGTAGGTTGGTATCGCCTGCGCGACTAACTTGGTTTCAAC
AAAAGACAAGAACATTCTTTCATGAACTTCAATGACAAAATGTAGTTGCATTTGTAATGAATACACTGGAGCGTTTGCCT
CCCAACGAAGGCCAACGAGCTTATTTTCGTGTAATCTGAGGAGCAACATTATCCTTTCTTTGCCG---------------
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>chr5A_73
------------------------------------------------------------------------CATACAAT
ACCCTTTTTAGAAGGGTCTGGGCCATGATGAATAGTGTACCATGTCGATGAGGCGGTCCTTGCAAAATTAGTGT--CTTC
AAGAACACCGTTAGGATAGTAGGAGTACTTCACTTGGAGGACCATG-CATACAACGAGTCCGACCAAGTGAGAAGCTGCC
AATCTTGCCTT-GCGAGCAAGGCTTGGTGAAACAGAAGGAAGTCGCAG-AACCCTAGTCCTCCCTTGCTGTTGAGCTCAA
TTATCTTTTCTCAAGACACCCAGTGGGACTTCCTTTTATATTTCTTTGAACCCTACCAAAA-TTACGAACTAGCTATGAC
AGATCACACACAAAGAGGGGCAACTTGAATACACCCATAATGTAGGTCGGTATCGCCTGCGCGACTAACCCGGTTCCAAC
AAAAGACAAGAACGTTCTTTCATGAACTCCAATGAAAAAATGTAGTTGCATTTGTAATGCATACACTGGAGCGTTTGCCC
CCTGACGAAGGCCAACGAGATTATTTTCATGTAATCTGAGGAGCAACACTATCCTTTCTTTGCTGCTGGTTTGTCTAGTT
TACGATGAAAGGCAGATGTATGAACATACAAGATGGAACACCGAACACAAACTAGATTTATCAAAACTTTTGAAATCAAC
GATTTTCTTTTTAGAACTATCAACGAATTTGGTTACTTAAAAGAAAAACAGATGATAA-----------CTGCGGGCCTT
GGCTGTTCGCAGCCCAGCCGCTACTAAGATGGGCTAACATGGGCAATAGAGGCCCACAGCTATCACCTTCCCCTCTCTCT
CTTCTCCGACTCGGTGCTCAACTGTTGCCTGCTGCAGC------------------------------------------
-------------------------------CCTCAAAAAAAGAAAAAAAAAACTGTTGCCTGCTGCTGATGCTGCTTGG
GCTGTGCTCCGCCCTGCGCTCGCGTGCCCTCCTCCTCCCTCTGACCCCGCCGGCTCGTACGGGCACGGCCACCCTTCGCC
GCCGGACTTGGCCACGGGCCACCTCCTCCTTGTCATCTCCGCCGTCGCCGGAGATGGAGGCGTCGGCGTACAAGTTCGGG
CCCTACAGGATCGACGCGAGGGAGGTCTTCCACGCCACGCCCCTCTCCTACGCCATGGTCAACCTACGCCCCCTCCTCCC
TGGTAAAAATCTCTATGATTGCCCCAACTTTCCCTTGCCTAATTTCTGTTCAATTTTCACTTTCA-----C---------
-------------AGGAATTGCTTGTCAGCTTGTGGTTGTATTTTTTGTTTGTTTGACGGAGATGTCAATGTGGTTGCTG
GTGG--------------------------------------------------------------------------AT
AATAAATCGCACTTTAGGGTTCCAGCGCTAGCACAATTTGTTTCCTTATAATTTTGTA----------------------
-----------------ATACTTGGTGTGGTGAATAATCGCAAGTCTGACTCACAATTATCCATGAT---GTCGGAGTAG
CACGTGCACATTTAAACCCTGAAGATGTTGTATTAACATTGTATGTATTTGTAGTATAGCAGCTATTTATGATCACAACT
TTATAGATCGCGG-TATACTGTTTATGCTATATTAACATGCCCCAATCTTACACTGCAGGTCATATCCTTTGTTTTGGCA
TACTCATTGCCGAGATTTACAGTTAAACACTGCCGGCAAGCCTGGAATCTCGTTTTTTTGTCAGACTGTTCATAAACTTT
GTTTCACTTGCTTGTTTCTGAAG--TGTCCAAGGTGCAGATATATACAGTAGGAAACACAGTTTAGAATCAAAGGAATGA
AATTTGTATG-----------------------------------------------GTATAATAATCTTTCATTTTGCA
CAGATCTCTAAAAAAGTAAAAATGCATGGCTAATGTAAATCTGAATATCAA-G-ATGTCAAGAGAATTATGCTAGGGTTA
GCTATTTATATAAGTGAATGGTTCATATAAAAGTAGCCAAATAGTTATCTCTTGCTGGAATCTGTTTGTACCTGATGGAC
TCGTGAGTGATGACGTCATCATCTTTTTTTTTTTTTTGAAACCGTACACCCGCAGGCATACGTTACTTGTATTTATACGA
GTCGGAAAACAGTACATACAACGTAGATACCAAACGTACACACACGAAAATACAGGAAGGATACAATCCGTAGAGCTGGC
CTCGCCATACATCGCAGAAGACCCCAAACAAAGAAAATTTGCAACCCCATCCTTGGTCTTCTCCGCCGATGCCGCTCCGT
CGCGTCGAAGCCAACCACCACCGCTGGAGGCCGGAAATAACACGAAGGAGCGGCTCACATAGAGCTGAAGGAACCCCTTG
CACATTGGCGTTGGTGAGCCGCAGTAGACACCAGATGCAAAGAACTGGATTTGATCCTAATTTTTCCATCGGCCGGAGGC
AACGGCCATGTCGGCCGTGCTCCCCAAGCTCCTTCACCTCCAGGCCTGGGGACGACGCCACTCTGCCTCCCTGAAGACAG
CCAGGCCCTTCCACCGCGAGCCAGATCCGATGCCAGCCGTGGACTCCATCCATCCCAAGCAGGGCACCGTCAGCACTGCT
CCCAACCGTACCTCCGGTCGAGCCCTGCAGCAAAACACACATAGTCCTCACACGCTCCTCGGCGCCGCACAGAAGCACAC
CACCGGAGCAGGGTTGGAGCGGGAGGAACCAAACACCCACAAGCTTCTCGCTGGAAGTAGGACTCCCAACGAAACGCGGT
CGAAGCCGGGGCACCTTTATTCCGACGCGGCGCCGTCGCCGGCGTCTCAACAACGCCTCCTGGAACCTATCTACAGGCCC
GTGCTTCCCCGAGGCTCCCCCCCACCTGCCGAGGCCAAGCCGGCCATCGGAGACGAGGAGGAGCGGCGAGGTCGCCGGCG
GAAAGACAGGAGATCTCGACCTGCTTCTGTTCGCCTCTCGCGTTCTGTGGAGAGTTCGAGAGGTGTCAAAGGATAGCTGA
CATGAGTTTTTGATGGGTTTAACGTCATCATCTTTTTATGATATATGATCTTTGCTATTATTATGTCCATCACTTTGTGC
ACCGACAAGTTC-CCAAAAT-GCTTAACCTCTCGAAGAAAGGCAGGAAATGTACTCATACTGCAACATTTACCGTGCTAC
ATATACTGATGGAGTGATGGTATAATACTT-TAACTCGAGGTAG-----------------CTTTGCTGTCCCTTGGTTC
GCAGCTTTCATAGTTC---------A--CTGTAAAACGTTTACTTACATTGTAAAGTTTGGTTATAC--ATTTTTTCCTT
AACAAAACATACATGTCCTTGTGTGCCCCAAGCGTGAAGTGAAACGCTTTACTGATCTAAGCACTGATGAGACAAGTGAT
TTATAGGTCACTGCAAAGGAAGTTGGTGTACGGCTTGAGCAGTACCACAAAGCTTCTTCACTTACATTTGCGATTCAGGT
CAACTCTCTGTCTCTCTATATATGTACTGAATAGCTTATGCTTCGAAATTTTTATATAATTAGTTCATCCAATTGAAAGC
GCATGATTTTTGGATTCTGCTACTGGGGTCCAGAACAAAATAGATCAGGCTAATCACCTAAATTACGCTTACACTGCCAT
ATGAGGTTCCTGTCTGTTCTTTGGACTTTTACTCCAGATCTGCTGCTGATCCGGTTACCTTGTTCACCTTTTACCTTT--
-TAATAACCAATGAATGACAAAGAAGCATTTCCTTATTGATATCTTTTTGGTACAGGATGGCCCTCAAGCTGGCCAAACA
GTTCCGCACGTCCACATCCATGTCATCCCCAGGAAGAAGGGAGATTTTGAAAATAATGATGAAATATATGACGCGGTTCG
TTGCCCACCTGTTTTGCCATCCATATAA-TTTCTTATGATTTTTTT-CACTAAATCCTACCA----TTTTCCTTGTAACA
GATTGATGTGAAAGAAAAAGAATTGAAGGAAAAGCTCGATCTGGATGTTGAAAGAAAAGATAGAACCATGGAAGAAATGA
GTCATGAGGCTAACGAGTACCGTGCTCTTTTCTCCTAGATGTATTTCTTACAAACAGTTTTCT-ATTTTTCACTTAGTGT
TTTCACTGAAATAAACTTTTGGACTGTTTGTTCTGCATAGTTTTTCGAGAGTGTAGCAATGAATATTTTATTTTCCACTG
ACCTGGTGATGTCGAGTCTCAGCTGATGAGTCTGAGGTGGTGGGTTACTTATGTAGTATGTG------------------
------------------------------ATGACAGTTGTTCCTCGCTAGTTGTGGCTTTATGGATATTAATGT-TTTA
GGTTTATTGATCCCAAACATGCATGAAAAAACACAGGCG-------TCCGAGCCTTACAATCCCTGCATTGTTTCTTAGT
TTGCAAGATTCAATACATGAGAAAGGTATTGTGGGCAAAGTATTTACTTATGAGATGCACAAGGCAGTGGCTAGATTATA
GCAAAAATGATATATGGTGTTTAGACATTCCATTGCAGGGGATGTAATAGCTTCCTAGGTATGGATGATTAGCTGTTTTA
CTTATCAA-CC-AAAAGCATTATTTGTTTTATGTTTGTGATTATGCCATGAATGATGAAATCTGCTATTATCAGTAGTAA
CCAAACTATAGGCAACAGCTCTAGCATGGACCTAACATGATCTTTTAATACGTGGAACACACTGAACTAGGCCTCTTGCA
GATTGTTCTAAGGATATACTAAGAGTCTCTTGCAGATTGTTCTAAGGATATACTAAGAGTCTCTTGCAGATTGTTCTAAG
GATATATTAAGAGTTGCAATTGTAAACTGGCATCACGAATTAATATCAACCAACTGGACGCATCATTTAGTTTCAGTTTA
CACCTTGGTTCGACATTACCTGTACCATTTAAGTTGACAAAAGTCAAATTTTCTCGATATTACTTTGT-AAGTGCATTAA
GGGTTATATTATACCGCACAGAGGTGATA--GTTTATTTGGGTGGGAGTATTCTGCTCATTTTAAAGCCTAAGATGTTAC
AGCTGATACATTGCACAACATTAGCAAAACTGAATTTGTAATACTCAGTTCAACATATTCCTAATGGGGACGGGAAGA--
----------GTATGCGGTTACGTGGTTATGGGCTAAAGTTATATTCCCTGAG-C-GGCTAAGCATTTAGCTTGTGCTTT
GCCGAAAGTGGACTCTTCACTGTTATAAAATGTTTATTAGCAAAACAATTCAGT
>chr5D_1014
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--TGTGCTCCGCCCTGCGCTCGCGTGCCCTCCTCCTCCCTCTGACCCCGCCGCCTCGTACGGGCACGGCCACCCTTCGCC
GCCGGACTTGGCCGCGGGCCACCTCCTCCTTGTCATCTCCGCCGCCGCCGGTGATGGAGGCGTCGGCGTACAAGTTCGGG
CCCTACAGGATCGACGCGAGGGAGGTCTTCCATGCCACGCCCCTCTCCTACGCCATGGTCAACCTACGCCCCCTCCTCCC
TGGTAAAAATCTCTATGATTGCCCCAACTTTCCCTTGACTAATTTCTGTTCAATTTTCACTTCCA-----CCTCAGAATC
ACAGTGTATTTCTAGGAATTGTTTGTGATTG-----------TTTTTTTTTGTCTGACGGAGATGCCAATGCGGCTGATG
GTTT--------------------------------------------------------------------------AT
TATAAATCACACTTTAGGTTTCCAGCGCTAGCACAATTTGTTTCGTTATAATTTTGTACTCTCTCCGTCCTAAATTTAAG
AGCGTTTTTGACACTAGATACTTAGTGTGGTGAATAATCGCAAGTCTGACTCAGAATTATCGACGATAGCGTCGGAGTAG
CA--TGCACATTTAAACCCTGACGATGTTGTATTAACATTGTATGTA---------------------------------
--------------------------------TTAACATGTCCCAATCTTGCTCTGCAGGTCATATCCTTTGTTTTGGCA
TACTCATCGCCGAGGTTTACAGTTAAGCACTGCCGGCAAGCCTGGAACCTCGTTTTTT-GTCGGACTGTTCATAAACTTT
GTTTCACTTGCTTGTTTCTGAAGAGTGTCCAAGGTGAAGACACATACAGTAGGAAACACATATTAGAATCAAAAGAATTA
TTGCACTCCCTTTCGACATTGTATAGAGGCTGGGTCAACTAATTTGGATTGGAGGGAGTATATCACTCTTTCATTTTGCA
TTGATCTC--------TAAATATGCATGGCTAATGTAAATCTGAATGTCAA-GGATGTCAAGCGAATTATGCTAGGGTTA
GCTATTTATATAAGTGAATGGTTCACATAAAAATAGCCAAATAGTTATCTCTTGCTGGAATCTGTTTATACCTGATGGAC
TCGTGAGTGATGACA-----------------------------------------------------------------
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------------------------TCGTCATCTTTTTATGAAATATGATATTTACTG---TTATGTCCATCACTTCCTGC
ACCGACAAGTTCACCCAAAA-GCTTAACCCCTTGAGGAAAGGCAGGAAATGTACTCATACTGCAACATTTACTGTGCTAC
ATATACTGATGGTATAATAC---------T-TAACTTGAGGTAGCTATCCATTGTTGCCCCCTTTGCTGTCCCGTGGTTC
GCAGCTTTCATAGTTC---------AAACTGTAAAACGTCTACTTACACTGTATGTC--------------TTTTTCCTT
AACAAAACATACATGTCCTTGTGTGCCCCAAGCGTGAAGTGAAACGCTTTACTGATCTAAGCACTGATGAGACAAGCGAT
TTATGGGTGACTGCAAAGGAAGTTGGTGTACGGCTTGAGCAGTACCACAAAGCTTCTTCGCTTACATTTGCAATTCAGGT
CAACTCTCATTCTCGCTATATATGTACTGAATAGCTTATGCTTCCAAATT-TTATATAATTAGTTCATCCAATTGAAAGT
GCATGATGTTTGGATTCTGCTACTGGGGTTCCGAACAAAATAGATCAGGCTAATCACCTAAATTACACTTAGAATGCCAT
ATGAGGTTCCTGTCTGTTCTTTGGACTTTTACTCCAAATCTGCTGCTGATTTGATTACCTTGTTTGCCTTTTACCTTT--
-TAATAACCTATGAATGAAAAAGAAGCATTTCCTTATTGATAGCTTTTTGGTACAGGATGGTCCTCAAGCTGGCCAAACA
GTTCCGCATGTCCACATCCATGTGATCCCCAGGAAGAAGGGAGATTTTGAAAATAATGATGAAATATATGACGCGGTTCG
TTGACCACCTGTTTCGTCATCCATATAATTTTCTTATGATTTTTTCCCACTAAATCC---TACTATTTTCCTTTGTAATA
GATTGATGTGAAAGAAAAGGAATTGAAGGAAAAACTTGATCTGGATGTTGAAAGAAAAGATAGAACCATGGAAGAAATGA
GTCATGAGGCTAACGAGTACCGTGCTCTTTTCTCCTAGATGTATTTCTTACAAACTGTTTTCA-ATTTTTTTTCACTT--
---------AATAAACTTCTGGACTGTTTGTTCTGCATTGTTTTTCGAGAGTGTAGCAATGAATATTTTATTTTTCGCTG
ACCTGGTCATGTCGAGTATCAACTGATGAGTCTGAGGTAGTGGGTTACTTATGTACTCCCTCCGTCCGAAAATACTTGTC
ATCAAAATGGACAAAAAGGAGTAGTACGCAATAACAGTTGTTCCTCGCAATTTATGGCCTTATGGATATTGATGGCTTTA
GGTTTATTGATCTCAAACATGCATGAAAAACACAGGCGTCCGAGGCTCTGAGCCTTACAATGCCTGCAATGTTTCTTAGT
TTGCAAGGTTTAATACATGAAAAAAGTACTGCAGGCAAAGTATTTATTTATGAGATGCACAAGACAGTGGCTAGATTGTA
GCAAAAATGATATATGGTGTTTAGACATTCCATTGCAGGGTATGTAATAGCTTCCTAGGCATGGAGCATTAGCTGTTTTA
CTTCTCAA-CCGAAAAGCATTATTTGTTTTACATTTGTGATTATGCCATGAACGATAAAATCTGCTATTATCTATAGTAA
CCATACTATAGGCAACAGCTCTAGCATGGACCTAACATGATCTTTTAATACGTGGAAGACACTGAACTAGGCCTCTTGCA
GATTGTTCTATGGATATACC------------------------------------------------------------
--------AAGAGTTGCAATTGTAAACTGGCATCACGAATTAATATCAACCAACTAGACGCATCATTTAGTTTCAGTTTA
CACCTTGGCTCGACATTGCCTGTACTATTCAAGTTAGCGAAAGGCAAATTTTCTTGATATTACTTTGGAAAGTGCATTAA
GGGT-----TATACCGCACAGAGGTGATA--GTTTAATTGGGTGGGAGTATTCTGCCCATTTTAAAGCCTAAGATGTTAC
AGCTGATACATTGCGCAACATTAGCAAAACTGAATTTGTAATACTCAGTTCAACTTATTCTTGATGGGGACTGGAGGAGC
TGTATCACCTGTATGAGGTTACGTGTTTATGGGCTAAAGTTTTATTCCCTGAG-CTGGCTAAGCATTTAGCTTGTGCTTT
GCCGAAAGTGAACTCTTCACTGTTATAAAATCTTTATTAGCAAAACAATTAAGT
>SNPs
---S-----S--------------S-----------S--S--S-SS-----------------------S-S--------
------------------S---------------S----------------S----------------------SS----
-S------------------------------------S-----------------------S------S------S---
-----------S----------S--------S---S-S----S-----S-----------------------S----S-S
----S-------------------------------------------------------------S--------S----
--S------S----S-----------------------------S---------S----S-----------S--------
----S-----------S------S------------------------S---------S----------S----S-----
-S--------S-----S-SS------S----------------------------S---------S--------------
-----S-----S----------------------S------------S--------------S--------------S--
SSSSSSSSS-S---S-SS-SS--SSSSSSSSSS-S----S-S--SS-SSS-SS-SSSSSSSSSSSSSSS-----------
----------------------------------------------S-S---------------------------SSSS
SSSSSSSS--S--S-SSSSSSS-S-SSSSSS-SS--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
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>forward_577
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------CCC
CTTGACGAAGACCAACA---------------------------------------------------------------
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>reverse_3263
--------------------------------------------------------------------------------
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--------------------------------------------------------------CCCATCACTTTCTGCACC
GA------------------------------------------------------------------------------
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>forward_1444
--------------------------------------------------------------------------------
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----------------------------------------------------------------GCCAATGCGGTTGATG
GTAC----------------------------------------------------------------------------
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>reverse_3414
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-----------------------------------------------------ATTACCCCGTTTGCTGTCCT-------
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>forward_1450
--------------------------------------------------------------------------------
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----------------------------------------------------------------------GCGGTTGATG
GTACTCCCTC----------------------------------------------------------------------
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-------------------------------------------------------------GTTTGCTGTCCTGTGGTTC
AC------------------------------------------------------------------------------
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>forward_1655
--------------------------------------------------------------------------------
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-----------------------------------AATCGCAAGTCTGGCTCACT-------------------------
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>reverse_4083
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--TACCACCCGTTTTTCCATCCA---------------------------------------------------------
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>forward_4003
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---------------------------------------------------------------CTCAAGCTGGCCAAACA
GTC-----------------------------------------------------------------------------
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>reverse_4937
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--------------------------------------------------------CGACACTGAACTAGGCGTCT----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------
