>input_sequence_37169
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----------------------------------------------GAATAAAAACGGCAATCCCATCCTCCGAATCGCC
AATCGATCGCCGATCGAGAACCCCTCGCCGCCTCGCATCGACTAAACCCCTCCCCCCCTCCCTCCCTCTCCTCTCCTCCC
TCCCCGCTCCCA---------CCCCACCCCACCCCCCACCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGCTTGCCAAAAGCGATCGA--------------------
---------------------------------------------------------------------ACGGCACCGCA
CCA--CCCCCTAATATACCGCGCGCGTACTCGGGAGGGAGGAACAGGAGACGTGGTCACACATCATAAGGATGGCGACAA
ACACACCACCCTTCGCCCCCGCGGCGGCTGCGATCGGCCAAGGCG------------------ACGCAGGAAAAGGAAGG
CGTGGAGTGCGATCCCGCGACGGCCGCAAGCGCCGGAGGGTCGCCGAGGAGAGCGGCGGCTGGGCGTCGCTCCCCAGCGA
CATGGTCCGCCTCGTCGCCGCGCGGGTGCT------GGTCACTGGGGACGTGGTGGACTACCTGGTCCTCCGCTCCGTCT
GCTCCGGCTGGCGAGCATGCACGCCCGCTGGCCGCAGCGGAAGCCTGGGGACAAGGAAGCAGCTGTGCCTCCGCCCGCGC
GGCTGGGTCGCGCTCTGCGACGGCGACGCGGTGCGCCCGGACGACGCCCGCGCGGTCACCTTCTTCAAGCCCAGCACCGG
CCGCCGCCTCCGTGTCCGCCTCCCGAAC---CTCCGGGGCCACAGGGTCGTCGCCATCAGCGACGGTCTCCTCGTCCTGC
TCCACAAGCGCACCACCGCCGTCCGCGTGCTCCATCCCTTCACCCGCGCAGTGCTCGACCTCCCGCCCATCGCCCCGACC
TTCCGCGTGGTGGCAGGGAGCCGG---------GACTCTCTCCTCCGCATGAACGCCGCCGTCTGCATGAACGC---ACC
GA---CCCGCGACTACTCCATCGACGTCGTGGCCTGGTTCCCGGGGACAAACGCCGTGCTCTGGGCCAAGCCCAGCTACG
CCAACTGGGACGCCATCTACCTTGACGTCGAGCTCCAGAGCGTCCTCCTTTTCCGCGGCCGTCTCTACGCCACCACGTGG
ACATCCGCCAACATCCTGCAGGTGTACCCTCCGAGCAAGTGCTTTCCTGTGGACACCCCCATCCCCGACGAGTTCGGGAA
CCCATCGTCGTGCCGCTACTTCCTCGTCGAGTCCAACGGCCGCATGCTGCTCGCTGTTCGGCATTATGTCTACACGGCCA
ACGCGCCGTCGTTCACCGCCTTCAAGATCTTCACGGTGGACCTGGACCGCCGGCAGCTGACCCCCGTGAGCAGCATCGGC
GATCGTGCGCTGATCCTCGGCCAGGACAGGTGCCTGTCCGTCTCGGCCAGCCACTTCCCGTCCATCAGCGGAAACTCTGT
CTACTGTTCCTACTACCGATACTCCTCGGAATTCGGTGTCCAGCTACACTCCCTGAGCAGTGGCTCCACCGAGGCGCCAT
CGGCGTGGAACCTCTTACGCGACGACATGGAGATGATTGCCTCAGCGCGGCCTTTCACCATTGCCGACCATCTTGTCACA
TACTGCAATCATCTTGAATGGTAAGTATCTACTATACCTTGTATCCCTAGTTCCCTACTACTCCATTTGGTGAGGATGAT
GGATTCACGGTCGTGTCTTCTTTTCAGACGCGCGCCCTAAT---TTATTTTGGGTTCCTCTTATGTATTGTAGGGCAAGA
GGACTCATGTTTCATGAGTATCACAACATACTTGATAGCTTCGTGGAACTAAAGAAGAAAATCAGGAAGCAAGATGCAGA
GCTGCGTATTCCATTTGGTGACGCCAGGAAGAAGACGGGCAAACCATCTACTCTCTATTCCAAATAGGAACACTTCAAAT
AC-----TATAATTGAGT-CAAA---------------------------------------------------------
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>chr5D_1_TraesCS5D01G212400
GGCAAACGTTTTTAGTTAAGTCCGTACATAAATATGGCAAACATGGCAAACTTCTTTAACTAATATGCT-AAAAAA-TGT
GGCAAACATGCCATGGCAACTAAAGATGTTCAAAAACATGG--CAACCTAATATGCTAAAAAACATGGCAA---------
-----CTAAAATCAGTATTCGTTTATAGTTGTG--TTTTTTCCACGGCAACTAAATGCATTTTTGT----CATGGTTCGT
TGTGTCTTTTTGCCATGTCCATCCCAAGAATGTTTGTCATGGCCTTTACAAATTAGTTTGAGAACACGGCAAATTTGTTC
TTTCAAATTTGTTTTGCCGTGGTTAGAAGTTTCGATCCTTCAAAATTTGTTTTGCCATTGCGATTAAATGTACGGTATCA
TTACAACTTACCATGTTTTCTCCATTT-TTTTGTCAAAATTTTCTATGTGTCTAGGGAGAACGTTTTTTCACCACAT---
--------TGTTGCCATGATGGCAAATTTCGTATAGTAAACTTT--ATTTTTTTGCCATCTTGTATCCATGTTGTATCTA
TATGTATGTAAACTTCATGGCAATTTTTTCGTAG---TGT----------------------------------------
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-------------------------------------------------------AAACTTCGTGGTGATGTCAACTTTA
TGTAGTGTAAAGA--TGTAGCTTGCCATGACTTTCTT-CCTTTTTTGCGCCA-----TTTTTCAAAACATAAACTTGAAC
ATGGCAAATTTTTTC-CGTAGAATGGCAAAAGATCATGGCAAT-TTTGTCGTGCAAAAG--CCAGTGTTTATTAGTCACA
TAGAAAAACCGGGCTTTTACTAGTTGTGACTTAATCTGGACTTTATTTTGTTTTA------TTTTTCAT----AGGAAAA
AGACCTATAGGGCCTGGTGGGTGGGGTGTTCGTGATGGGGCGCTTTTCCTCCCGAACGAGTGG-TTCGGACGATCTCCCC
CCGGTAGCGAACGAGTTGTTCGGTCCGGGGGTCTTCCAGACCGAACGCCAGCTCAGTATCGGGGTCCAAAAAATAAGAAT
AGGCAATTCGCCCTTCAAACGATCGGAATT-------AATAAAACGGAATAAAAACGGCAATCCCATCCTCCGAATCGCC
AATCGATCGCCGATCGAGAACCCCTCGCCGCCTCGCATCGACTAAACCCCTCCCCCCCTCCCTCCCTCTCCTCTCCTCCC
TCCCCGCTCCCA---------CCCCACCCCACCCCCCACCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGCTTGCCAAAAGCGATCGA--------------------
---------------------------------------------------------------------ACGGCACCGCA
CCA--CCCCCTAATATACCGCGCGCGTACTCGGGAGGGAGGAACAGGAGACGTGGTCACACATCATAAGGATGGCGACAA
ACACACCACCCTTCGCCCCCGCGGCGGCTGCGATCGGCCAAGGCG------------------ACGCAGGAAAAGGAAGG
CGTGGAGTGCGATCCCGCGACGGCCGCAAGCGCCGGAGGGTCGCCGAGGAGAGCGGCGGCTGGGCGTCGCTCCCCAGCGA
CATGGTCCGCCTCGTCGCCGCGCGGGTGCT------GGTCACTGGGGACGTGGTGGACTACCTGGTCCTCCGCTCCGTCT
GCTCCGGCTGGCGAGCATGCACGCCCGCTGGCCGCAGCGGAAGCCTGGGGACAAGGAAGCAGCTGTGCCTCCGCCCGCGC
GGCTGGGTCGCGCTCTGCGACGGCGACGCGGTGCGCCCGGACGACGCCCGCGCGGTCACCTTCTTCAAGCCCAGCACCGG
CCGCCGCCTCCGTGTCCGCCTCCCGAAC---CTCCGGGGCCACAGGGTCGTCGCCATCAGCGACGGTCTCCTCGTCCTGC
TCCACAAGCGCACCACCGCCGTCCGCGTGCTCCATCCCTTCACCCGCGCAGTGCTCGACCTCCCGCCCATCGCCCCGACC
TTCCGCGTGGTGGCAGGGAGCCGG---------GACTCTCTCCTCCGCATGAACGCCGCCGTCTGCATGAACGC---ACC
GA---CCCGCGACTACTCCATCGACGTCGTGGCCTGGTTCCCGGGGACAAACGCCGTGCTCTGGGCCAAGCCCAGCTACG
CCAACTGGGACGCCATCTACCTTGACGTCGAGCTCCAGAGCGTCCTCCTTTTCCGCGGCCGTCTCTACGCCACCACGTGG
ACATCCGCCAACATCCTGCAGGTGTACCCTCCGAGCAAGTGCTTTCCTGTGGACACCCCCATCCCCGACGAGTTCGGGAA
CCCATCGTCGTGCCGCTACTTCCTCGTCGAGTCCAACGGCCGCATGCTGCTCGCTGTTCGGCATTATGTCTACACGGCCA
ACGCGCCGTCGTTCACCGCCTTCAAGATCTTCACGGTGGACCTGGACCGCCGGCAGCTGACCCCCGTGAGCAGCATCGGC
GATCGTGCGCTGATCCTCGGCCAGGACAGGTGCCTGTCCGTCTCGGCCAGCCACTTCCCGTCCATCAGCGGAAACTCTGT
CTACTGTTCCTACTACCGATACTCCTCGGAATTCGGTGTCCAGCTACACTCCCTGAGCAGTGGCTCCACCGAGGCGCCAT
CGGCGTGGAACCTCTTACGCGACGACATGGAGATGATTGCCTCAGCGCGGCCTTTCACCATTGCCGACCATCTTGTCACA
TACTGCAATCATCTTGAATGGTAAGTATCTACTATACCTTGTATCCCTAGTTCCCTACTACTCCATTTGGTGAGGATGAT
GGATTCACGGTCGTGTCTTCTTTTCAGACGCGCGCCCTAAT---TTATTTTGGGTTCCTCTTATGTATTGTAGGGCAAGA
GGACTCATGTTTCATGAGTATCACAACATACTTGATAGCTTCGTGGAACTAAAGAAGAAAATCAGGAAGCAAGATGCAGA
GCTGCGTATTCCATTTGGTGACGCCAGGAAGAAGACGGGCAAACCATCTACTCTCTATTCCAAATAGGAACACTTCAAAT
AC-----TATAATTGAGT-CAAATTAAAGCCTAGGAAATTATCAAAAAAAAATATTTAAAGCTTAGGAAGCCATATACAT
GCATCTTCTCTCCATTTCAAGATAGTATAATTCGTATTAGCAT---CCTATGGCAAACTTTGTAAAGTTTGTCCAAGTTT
ACAGGGGA-AAAAAACATCTATAGTACCCATATATCATTACACTCATCATGAAATATACTA-------------------
-------------------------------------T--CATACTGGTATTTATTTTGGTATTGCAGATGTTGATATAG
TTTCTAACAACATGGATGGGGTAATTCTTTCTAAGTTTGACTAAAGACAAAATTAGCATGCATTATATTTTGAATGGAGA
AAGTGTTATTGATACTCCAGCTCAACCAAGGGTATTTTTGTCCTTAACTGATTGTGAACACCTAAAAGAGATTGGATGAA
GAATACTTTGGTCCAGTTCCATGGAAGGCTCGTCGTCTAAACTCTTATAATCAGATCTCCTTCAGCGGCAAGAGATCTCC
TCCAGGCCGTCATCTTACTCTTTTCCTCAAGAGAAAAATATATTTGAGGGAAGTATCACAACCAAAATGTATTTGGTCTG
ACACAAGAAAAGCCAAAAGAATATTTAA-GTTTTAATAGTTGAGTTGTCAATTCAACCACACGTGAAAAATAAATACTTG
CTTGACAGAATTTATTACTAGCAAAGGTGATGAAGTGATTGTAGCTTGATTGCGGTAAGGTGACGGAACAATACTCGGCG
GTTGCAAGTGCAAAGTATCTTAAAAAGAGCAACAACTATTAAAAGCGTAGGCATGAGGATAGATAATGAGATGTTGCATG
GACATAATCAGTTATGTAATAGCGGGTAGCATAGGGAGATAGTAGTCTGGCTCAAATTCATCAACTTATTTAATCATGTA
TTTCGTATGAAGGTATACATGCTTGCAATAAGAATTTGCGCAACATCTTTTGTCATAGCATCCCGTTTCAGCAGGATCCT
AATAGAAATTAAGGATACTTAAGGTATTCATTTCACAGAGTACCAA
>chr7A_9
--------TTTTTAATTAAGTTTGTACAAAAACATGGCAAGCAT-GCAAACTTCTTTAACTAAGATGTT-CAAAAAACAT
GGCAAACTTGCGATGGCAACTAAAGATGTTCAAAAGCATGTGACAACCTAAGATGTTCAAAAACATGCCAAACTTGCCAT
GGCAACTAAAATCAGTATTA-TTTATAGATGTG--TCTTTTTCATGGCAACTAAATGCATTTTT-T----CATGATTCGT
TGTGTCTTTTTGCCATGTCCATCCGAAAAATGTTTGTCATGGCCATTACAAACTAGTTTGAGAATACGGCAAGTTTGTTC
TTTCAAATTTGTTTTTGCCAGGCAAAAAGTTTTGATCCTTTGAAGTTTGTTTTGCCATGGGGATTACATGTATGATATCA
TTACAACTTAAGATGTTTTCTCCATTTTCCCCCT--AATTTTTCTATGTGTCTAGAGAGAAC-TTTTTTCACCATC----
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-----------ACTTCATGGCAACTTCTTCATCTTCTT------------------------------------------
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-----------------------------------------------------GTAAACTTCCTAGTGATGGCAACTTTT
TGTATTGTAGAGA--TACAGATCGCCATGACTTTCTTGTCCTTTTTTGCGCCA-----TTTTGAAAACATAAACTTGAAC
AT----AATTTTTTC-CATAGAATGGCAAAAGATCATGGCAAT-CTCGTCGTGCAAAAAAACCAGTGTTTATTAGTCACA
TATAAAAACTGGGCTTTTACTAGT---GATTTAATTTGGGCTTTATTTTTCATTTTATTGTTCG--------CAGGAAAA
AGGCCTGTAGGGCCCGGTGGGTGGGGCGTTCGGGCA-GGGGGGTTTTCCTCCCGAACGAGTGCGTTCGGTCGATCTCCCT
CTCGTAGCGAACGAGTTGTTCGGTCCGGGGGTCTCCCAGACCGAACGTCAGCGCCATATCGGGGTCTATAAA--------
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>chr7D_39
--------------------------------------AAACATGGTAAACTTCTTTAACTAAGATGTT-CAAAAA-CAT
GGCAAACTTGCCATGGCAACTCAAGATGTTAAAAAAAATGG--CAACCTAATATACTCAAAAACATGGCAAACCTGCCAT
GGCAACTAAAATCAGTGTTTGTTTATAGCTGTGTTTTTTTTCCACGGCAACTAAATGCATTTTT-TTTGCCATGGTTCGT
TGTGTCTTTATGCCATGTCCATCCGAAGAGTGTTTGGCATGGTCTTTACAAATTAGTTTGAGAACACGGCAAGTCTGTTC
TTTCAAATTTGTTTTGCCATGGCAAAAAGTTTCGATCCTTTGAAATTTGTTTTGCCATGCCGATTACATGTATGCTATCA
TTACAACTTAAGATGTTTTCTCCATTTTTTTTTTCAAAATTTTCTATATGTCTAGAGAGAAC-ATTTTTCACCGCAT---
--------TGTTGCCATGATGGCAAATTTCGTATTGTAAACTTC--TTTTTTTTGCCACCTAGTATCCATGTTGTATCTA
TATGTATGTAAACTTCATGGCAACTTTTTCGTAG---TGTAGGGGCTGTTTGGTTTGTGACTAACTTAGCCAAAGATTAC
CACAACTAAGGTTAGGCAAGTTTGACCAACTTAGGTGAGTGTTTGATTCAAGCCACACCTTAGGCAAGCCACACTTGGGC
CCCACATGTCATACAAACAAAAAGTGTGGCAAGATTCCCTTAGGCTTGCCAAGTTGTGGCTCTCATTTTGATAAACTATA
GACAAGCTTGGCAAAAATGTGTGGCAATGCTAGTCCTAAAACCAAACAGCCCCGTAAACTTCGTAGTGATGGAAACTTCT
TGTAGTGTAAAGA--CGCAGATTGCCATGGCTTTCTT-CCTTTTTTGCGCCA-----TTTTTTAAAACATAAACTTGAAC
ATGGC-AAGTTTTTC-CATAGAATGGCGAAAGATCATGGCAAT-TTTGTCGTGCAAAAG-ACCAATGTTTATTAGTCACA
TATAAAAACTGGGCTTTTACTAGTCATAACTTAATCTGGGCTTTATTTTTTGTTTTC----TTTTTCAT----AGGAAGA
AGGCATGTAGGACCCGGTGGGTGGGGCGTTC-------------------------------------------------
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>chr1B_39
--------------------------------------AAACATGGCAAACCTTTTTAATTAAGTTCATACAAAAA-CAT
GGCAAACTTGCCATGGCAACTAAAGATATTCAAAAACATGG--CAACCTAATATGCTAAAAAATATGGCAAACTTGCCAT
GGCAACTAAAATCAATATTTGTTTATAGTTGTGTG---TTTTCACGGCAACTAAATGCAA--TT-TTTGCCATGGTTCCT
TGTGTCTTTTTTCCATGTCCAGCCAAAGAATGCTTGTCATG---------------------------------------
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-----------------------------------------------GTGTCTAGAGAGAAC-ATTTTTCACCGCGT---
--------TGTTGCCATGATGGGAAATTTCATATTGTAAACTTCAGTAA-TTTTGCCATCTTGTATCCATGTTGTATCTA
TATGTATGTAAACTTCATGACAATTTTTTCGTAG---TGTA---------------------------------------
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--------------------------------------------------------AATTTCATAGTGATGGCAACTATT
TATAGTGTAAAGA--TGCAGATTGCCATGAATTTCTT-CATTTTTTCCGCCA-----TTTTTGGAAACATGAACTTGAAC
ATGGC-AATTTTTTT-CATAGAATGGCAAAAGATCATGGCAAT-TTTGTCAGGCAAAAG-ACCGGTGTTTATTAGTGACA
TATAAAAACTGGGCTTTTACTAGTGGTAAATTAATCTGGGCTTTATTTTTTGGTTTC----TCG--------CAGGAAAA
AGGCCTGTAGGACCAGGTGGGTGGGGCGTTCACGCTGGAGCGTTTTTCCTCCCGAACGAGTGGGTTCGATCG-TCTCTCT
CCTGTAGCGAACGAGTTGTTCGGTCTGGGGGTCTCCCAAACCGAACGTTAGCCCCATATCGGGGTCC-------------
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>chr7A_323
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--------------------------AAGTTTTGGTCCTTTGAAATTTGTTTTGGCATGAAGATTACATGTACGATGTGA
TTACAACTTAAGATGTTTTCTCCATTTTTTTC--CAGATTTTTCTATCTGTCTAGAGAGAAC-ATTTTCACCATATCTTT
TTTGCATATGTTGGCATGATGGCAACTTTCGTAGTGTAAACTTCAC-TTTTTTTGCCATCTTGTATCCATGTTGTATCTA
TATATATGTAAACTTCATGGCAACTTTTTCGTATTT--------------------------------------------
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----------------------------------------------------CGTAAACTTCATAGTGATGGCAATTTTT
CATAGTTTAAAGA--TGCATATTGCCATGACTTC--T-TCCTTGTTTGAGCCA-----TTTTGAAAAAATAAACTTGAAC
ATGGC-AAAAAAGAAACATAGAATGGCAAAAGACCATGGCAAT-TTTGTTGTGCAAAAG-ACCATTGTTTAGTAGTCAGA
---AAAAACCGGGCTTC-ACTAATCACAACTCAATACAGGCTTTATTTTTCCT--------TTTTTCAT----AGGGAAA
AGGCCTATAGGGCCCAGTGGATGGGGTGTTTGCGCCGAGGCACTTCTCCTCCCAAACGAGTCG-TTCG------------
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>chr4B_440
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----------------------------------------------------------------TTTTTCACCGCAT---
--------TGTTGCCATGATGGCAAATTTCGTATTGTAAACTTCCTTTTTTTTTGCCATCTTGTATC-----------TA
TATGTATGTAAACTTCACGACAGCCTTTTCGTAG---T------------------------------------------
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-----------------------------------------------------GTAAACTTCGTAGTGATGGCAACTTTT
TGTAGTGTAAAGAAGCGCAAATTGCCATGACTTTCTT-CCTTTTTTTGCGCCATTTTTTTTTGAAAACATAAACTTGAGC
ATGGC-AATTTTTTC-CGTATAATTGCAAAAGATCATGTCAATTTTTGTTGTGCAAAAG-ACCCGTGTTTATTAGTCACA
TATAAAAACTGGGTTTTTACTAGTCGTAACTTAATCTAGGCTTTATTCTTTGT--------TTTCTTTTTTACAGGAAAG
AGGCCTGTAGGGCCTGATGATTGGGGCGTTCGCGCT-GGGGTGTTTTCCTCCCGAACGAGTGGGTTCGGTTGATCTTCGT
CCGGTAGCGAACGAGTTGTTCGGTCC-GGGGTCTCCCATACCGAACGTCAGTGCCTTATCGGGGTCC-------------
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>chr5B_948
CAAAAAAAAAAA--------------------------------------------------------------------
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--GCAATTCGCCCTTCAAACGATCGGAATT-------AATAAAACGGAATTAAAACGGCAATCCCATCCTCCGAATCGCC
AATCC-----------AGAACCCCTCGCCTCGCACCACCTCGCGTCGCGTCGACNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGACGGCACCGCA
CCGCCCCC--TAATATACCGCGAGCGTAATCGGGAGGGAGGAATAAGAGACGCGGTCACA---CATAAGGATTGCGATAA
ACACACTACCCTTCGCTCCCGCGGCGGCTGCGATCGGCCA--------------TGGCCGCGTACACAGCAAAAGGAAGG
CGTGGAGTGCGATCACGCGACGGCTGCAAACGCCGGAGGGTCACCGAGGAGAGCGGCGGCTGGGCGTCGCTCCCCAGCGA
CATGGTCCGCCTCGTCGCCGCGCGGGTGCT------GGTCACCGGGGACGGCGTGGACTACCTGGTCCTCCGCGCCGTCT
GCTCCGGCTGGCGAGCATGCATGCCCGCTGGCCGCAGCCGAAGCCTGGGGACAATGAATCAGCTGTTCCTCCGCCCGCGC
GGCTGGGTCGCGCTCTGCGACGGCGACGCGGTGCGCCCGGACGACGCCCGCGCGGTCACCTTCTTCAAGCCCAGCACCGG
CCGCCGCCTCCGTGTCCGCCTCCCGAAC---CTCCGGGGCCACAGGATCGTCGCCATCAGCGACGGCCTCCTCGTCCTGC
TCCACAAGCGCACCACCGCCATCCGCGTGCTCCACCCCTTCACCCGCGCAGTCCTCGACCTCCCGCCCATCGCCCCGACC
TTCCGCGTGGTGGCAGGGAGCCGG---------GACTCTCTCCTCCGCATGAACGCCACCGTCTGCATGAACGC---ACC
GA---CCCGCGACTACTCCATCGACGTCGTGGCCTGGTTCCCGGGGACAAACGCCTTGCTCTGGGCCAAGCCCAGCTACG
CCAACTGGGACGCCATCTACCTCGACGTCCAGCTCCAGAGCGTCCTCCTTTTCCGCGGCCGTCTCTACGCCACCACGTGG
ACATCCGCCAACATCCTGCAGGTGTACCCTCCGAGCAAGAGCTTTCCTGTGGACACCCCCATCCCTGACGAGTTCGGGAA
CCCATCATCGTGCCGCTACTTCCTCGTCGAGTCCAACGGCCGCATGCTGCTCGCTGTTCGGCATTATGTCTACACGTACA
ACGCGCCGTCGTCCATCGCCTTCAAGATCTTCATGGTGGACCTGGACCGCCGGCAGCTGACCCCCGTGAGCAGCATCGGC
GATCGTGCGCTGATCCTCGGCCAGGACAGGTGCCTATCCGTCTCGGCCAGCCACTTCCCGTCCATCAGCGGAAACTCTGT
CTACTGTTCCTACTACCCATACTCCTCGGAATTCGGTGTCCAGCTACACTCCCTGAGCAGTGGCTCCACCGAGGGGCCAT
CGGCGTGGAACCTCTTACGCGACGACATGGAGATGATTGCCTCGGCGCGGCCTTTCACCGTTGCCGACCATCTTGTCACA
TACTGCAATCATCTTGAATGGTAAGTATCTACTA--CCTTGTATCCCTAGTTCCCTACTACTACATTTGGTGAGGATCAT
GGATTCACGGTCGTGTCTTCTTTTCAGACGCGCGCCCTAAT---ATATTTTGGATTCCTCTTATGTATTGTAGGGTAAGA
GGACTCATGTTTCATGAGTATCACAACATACTTGATAGCTTCGTGGAACTAAAGAAGAAAATCAGGAAGCAAGATGCAGA
GCTGCGTATTCCATTTGGTGAGGCCAGGAAGAAGACGGGCAAACCATCTACTCTCTATTTCAAATAGGAACACTTCAAAT
CAAATACTATAATTGAGTCAAAATTAAAGCTCGGGAAATTATC-AAAAAAAATATTTAAAGCCTAGGAAGCCATATACAT
GCATCTTCTCTCCATTTCAAGATAGTATAATTCGTATTAGCATTGTCCTATGGCAAACTTTGTAAAGTTTGTCCAAGTTT
ACAGGGGGGAAAAAACATCTATAGTACCCATGTATCATTACATTCATCATGAAATATACTA-------------------
-------------------------------------TATCATACTGGCATTTATTTTGGTATTGCGGATGTTGATATAG
TTTCTAACAACATGGATGGGGTAATTCTTTCTAAGTTTGACAAAAGACAAAACTAACGTGCATTATATTTTGAATGGAGA
AAGTGTTATGTATACTCCAGCTCAACCAAGGGTATTTCTCTCCTTAACTGATTGTGAACACCTAAAAGATATTAGATGAA
GAATATTTTGGTCCAATTCCATGGAAGGCTCATCGTCTAAACTCTTATAATCAGATCTCATCCAGCGGCAAGAGATCTCC
TCTAGCCCGTCATCTTACTCTTTTCCTCAAGAGAAATATATTTGAT-GGGAAGTATCACAACCAAAATGTAT-TGGTCTG
ACACAAGAAAAGCCAAAGAATATTTATA-GTTTTAACAGTTGAGTTGTCAATTC----------------TAAATACTTA
CTTGACATAATTTATTACTAGCAAAGGTGATGAAGTGATTGTAGCTTGATTGCGGTAAGGTGACGGAGCAATACTCGGCA
GTTGCAAGTGCAAAGTATCTTAAAAAGAGCAACAACTATCAAAAGCGTAGGCATGAGGATGGGTAATGAAATGTTGCATG
GATATAATCAATTATGTAATTGCGTGTAGCATAGGGAGATAGTAGTCTAGCTCAAATTCATCAACTTATGTATGCATGTA
TTTCGTATGAAGGTATACGTGCTTGCAATAAGAATTTTCGCAACATCTTTTGTCATAGCATCCCGTTTCAGCAGGATCCT
AATAGAAATTAAGGATACTTAAGGTATTCATTTCACAGACTAC---
>chr5A_956
AAGAAATCGA----------------------------------------------------------------------
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---CACTTCGCCCCTCAAAAGATCGGAATTAATAATAAATAAAACGTAATAAAAACGGCAATCCCATCCCCCGAATCGCC
AATCGATCGCCGATCGGGAACCCCTCGCCGCCTCGCATCGACTAAACCCCTCCCCG-CTCCCTCCCTCTCCTCTCCTCTC
CTCCCTCTCCCCGCCCCCGCCCCCCACCGCATCCCCCACCCTCCCTCACTTTTA--------------------------
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----------------------------------------GGCTTGCCAAAAGCGATCGA--------------------
---------------------------------------------------------------------ACGGCACCGCA
CCA--CCC--TAATATATCGCGCGCGTACTCGGGAGGGAGGAACAGGAGACGTGGTCACACATCATAATGGCGATAGACG
---CACCACCCTTCGCCCCCGCGGCGGCTGCGATCGGCCAAGGCGCGACGGCCATGGCCGCGTACGCAGCAAAAGGAAGG
CGTGGAGTGCGATCACGCGACGGCCGCAAGCGCCGGGGGGTCGTCGAGGAGAGCGGCGGCTGGGCGTCGCTCCCCAGCGA
CATGGTTCGCCTCGTCGCCGCGTGGGTGCT------GGTCACCGGGGACGTGGTGGACTACCTGGTCCTCCGCGCCGTCT
GCTCCGGTTGGCGAGCATGCACGCCCGACGGCCGCATTGGAAGCCTAGGGAGAAAGAAGCAGCTGTGCCTCCGCCCGCGC
GGCTGGGTCGCGCTTTGCGACGGCGACGCGGTGCGCCCGGACGGCGCCCGCGCGGTCACCTTCTTCAAGCCCAGCACCGG
CCGCCGCCTCCGTGTCCGCCTCCCGAAC---CTCCGGGGCTACAGGATCGTCGCCATTAGCGACGGCCTCCTCGTCCTGC
TCCACAAGCGCACCACCGCCGTCCGCGTGCTCCACCCCTTCACCCGCGCAGTGCTCGACCTCCCGCCCATCGCCCCGACC
TTCCGCGTGATGGCAGGGAGCCGG---------GACTCTCTCCTCCGCATGAACGCCGCCGTCTGCATGAACGC---ACC
GA---CCCGCGACTACTCCATCGACGTCGTGGCCTGGTTCCCGGGGACAAACGCCGTGCTCTGGGCCAAGCCCGGCTACG
CCAACTGGGACGCCATCTACCTCGACGTCGAGCTCCAGAGCGTCCTCCTTTTCCGCGGCCGTCTCTACGCCACCACGTGG
ACATCGGCCAACATCCTGCAGGTGTACCCTCCGAGCAAGGACTTTCCTGTGGACACCCCCATCCCCGACGAGCTCGGGAG
CCCATCGTCGTGCCGCTACTTCCTCGTCGAGTCCAACGGCCGCATGCTGCTCGCTGTTCGGCATTATGTCTACGCGTACA
ATGCGCCGTCGCTCACCGCCTTCAAGATCTTCACGGTGGACCTGGACCGCCGGCAGCTGACCCCCGTGAGCAGCATCGGC
GATAGTGCGCTGATCCTCGGCCAGGACAGGTGCCTGTCCGTCTCGGCCAGCCACTTCCCGTCCATCACCGGAAACTCTGT
CTACTGTTCCTATTACCTATGCTCCTCGGCATTCGGTGTCCAGCTACACTCCCTGAGCAGTGGCTCCACCGAGAGGCCAT
CGGCGTGGAACCTCTTACGCGACGACATGGAGATGATTGCCTCAGCGCGGCCTTTCACCATTGCCGACCATCTTGTCACA
TACTGCAATCATCTTGAATGGTAAGTAT---CTA--CCTTGTATCCCTAGTTCCCTACTAGGAAGT------AGGATCAT
GGATTCACGGTCGTGTCTTCTTTTCAGACGCACGCCCTAATTTATTTTTTTGGGTCCCTCTTATGTATTTTAGGGCAAGA
GGACTCATGTTTCATGAGTATCACAACATACTTGATAGCTTCGTGGAACTAAAGAAGAAAATCAGGAAGCAAGATGCAGA
GCTGCGTATTCCATTTGGTGAGGCCAGGAAGAGGACGGGCAAACCATCTACTCTCTATTTCAAATAGGAACACTTCAAAT
ACG-TACTATAATTGAGTCCAAATTAAAGCCTAGGAAATTATC-AAAAAATATATTTAAAGCTTAGGAAGCCATATACAT
GCATCTTCTCTCCATTTCAAGATAGTATACTTCGTATTAGCACTGTCCTATGGCAAA---------GTTTGTCCAAGTTT
ACAGGGAAAAAATAACATCTATAGTACCCATATATCATTACATTCATCATGAAATATACTACTCCCTCCGTCTCATAATA
TAAGAGCGTTTTTACACTACATATGGGACGGGGGGAGTATCATACTGGCATTTATTTTGGTATTGTGGATGTTGATATAG
TTTCTAACAACATGGACGGGGTAATTATTTCTAAGTTTGACAAAAGACAAAACTAACGTGCATTATATTTTGAATGGAGA
AAGTGTTATGTATACTCCAGCTCAACCAAGGGTATTTTTGTCCTTAATTGATTGTGAACACCTAAAAGATATTAGATGAA
GAATATTTTGGTCCAATTCCATGGAAGGCTCGTCGTCTAAACTCTTATAGTCAGATCTCATCCAGCGGCAAGAGATCTCC
TCCAGCCCGTCATCTTTCTCTTTTCCTCAAGAGAAAATGTA------------TATCACAATCAAAATGTATC-GGTCTG
ACACAAGAAAAGCCAAAGAATATTTATAAGTTTTAGCAATTGAGTTGTCAATTC----------------TAAATACTTA
CTTGACATAATTTATTACTAGCAAAGGTGATGAAGTGATTGTAGCTTGATTGCGGTAAGGTGACGGAGCAATACTCGGCA
GTTGCAAGTGCAAAGTATCTTAAAAAGAGCAACAACTATCAAAAGCGCAGGCATGAGGAC-------------------G
GATATAGTCAATTATGTAATAGCTGGTAGCATAGGGAGATAGTAGTCTAGCTCAAAGTCATCAACTTAGATATGCATATA
TTTTGTATGAAGGTATACGTGCTTGCAATAAGAATTTGCGCAACATCTTTTGTCATAGCATCTCGTTTCAATGGGATCCT
AATAGAAATTAAGGGTATTTAAGGTATTCATTTCACAGAGTACCAA
>chr5B_1622
GCAGGAACA-----------------------------------------------------------------------
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--------------------------------------------------------------------------GCAAGG
CGCGCGGGGCGATCCCGCGATCGCCGCAAGCGCCGGAGGATCGCCGAGGAGAGCGGCGGCTGGGCGTCGCTCCCCGGCGA
CTTGGTCCGCCTCGTCGCCGAGCGGGTGCG------GCTCGACGGGGACGTGATCGACTACATCTCTCTCCGCGCGGCCT
GCTCCGGCTGGCGCGCCAGCACGGACTTCCCGCGCAGCCCGCAGGAGCAGTACCATTACT---------TCCGCCCTGGC
GGCTGGGTCGCGCTCTGCGACGGCGACCAGACGCGCCCGGACGACGCACTCCAGATCGCCTTCTTCAAGCTCAGCACGGG
ACGGCGCCTCCGCGCCCGCTTCCCGACGAAACTCAGGGGCTACAGGATCGTCTCCTTCAGCGGCGGCCTCCTCGTCCTGG
TCCACAAGCGCGACTCCATTGTTCGCTTGCTCCACCCCTTCACCAGGAGCTACCTCGATCTCCCGCCCATGGCCCCGACC
TTTCGCATCGTCGTAGGCGTGAAAGACAAAAAAGAGTGTTTCCTCCGCATGAACGCCGCCATCTGCACGAGCAC---CGC
GA---CCCCCGACACCTCTGTCGACGTCGTGGCCTGGTTCCCGGGGGAAAAGGCGATGCTCTGGGCCAAGCCTGGGGATG
CCAGCTGGAACGCCATCTACCTCGACGTCCAGCTCCAGAGCGTCCTCGCCTTCCGTGGCCGCCTCTACGCCACCGCTCGG
GACTCGGCAAACATCCTTCAGGTCTACCCTCAGAGCAATATCTTTCCGGTGGATACTCCTATCCCCGACGAGCTCGGCCC
TCCGTTGTCGTGCCGATCCTTCCTCGTCGAGTCCAACGACCGCATGCCGCTCGCTGCTCGCCACCATGTCGCGCTCCCCA
ACATACA------CACGGCCGTCAAGATCTTCGACGTGGATCTCGACCGCCGGCAGCTGACCCCGCTGGGCAACATTGGC
GATCGCGCGCTGTTCCTCGGTAAGGACAGATGCCTGTCCGTCTCGGCCAAACACCTGCCGTCCATCAGAGGAAACTCTGT
TTAC----------------------------------------------------------------------------
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----------------------------------------------
>chr5D_1626
GA---AACA-----------------------------------------------------------------------
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--------------------------------------------------------------------------GCAAGG
CGTGTGGGGCGATCCCGCGATCGCGGCAAGCGCCGGAGGATCGCCGAGGAGAGCGGCGGCTGGGCGTCCCTCCCCGGCGA
CTTGGTCCGCCTTGTCGCCGAGCGGGTGCG------GCTCGACGGGGACGTGATCGACTACATCTCCCTCCGCGCGGCCT
GCTCCGGCTGGCGTTCCAGCACGGACTTCCCGCGCAGCCCGCAGGAGCAGTACCATTACT---------TCCGCCCTGGC
GGCTGGGTCGCGCTCTGCGACGGCGACCAGACGCGCCCGGACGACGCGCTCCAGATCGCCTTCTTCAAGCTCAGCACGGG
ACGGCGCCTCCGCGTCCGCTTCCCGACGAAACTCAGGGGCTACAGGATAGTCTCCTTCAGCGGCGGCCTCCTCGTCCTGG
TCCACAAGCGCTTCTCCATTGTTCGCTTGCTCCACCCCTTCACCCGGAGCTACCTGGATCTCCCGTCCATTGCCCCGACC
TTTCGCATCGTCGTAGGCGTGAAAGACAAAAAAGAGTGTTTCCTCCGCATGAACGCCGCCATCTGCACGACGAGCGGCGC
GA---CCCCCGACGCCTCTGTCGACGTTGTGGCCTGGTTCCCGGGGGAAAAGGCGATGCTCTGGGCCAAGCCCGGCGATG
CCACCTGGAACGCCATCTACCTCGACGTCGAGCTCCAGAGCGTCCTCGCCTACCGTGGCCGCCTCTACGCCACCGCTCGG
GACTCGGCAAGCATCCTTCAGGTCTACCCTCAGAGCAATATCTTTGCGGTGGACACTCCTATCCCCGACGAGCTTGGCCC
TCCGTCGTTATGCCGCTCCTTCCTCGTCGAATCCAACGACCACATGCTGCTCGCTGTTCGCCACCGCGTGGCGCTCCCCA
ACACACA------CACCGCCGTCAAGATCTTCGACGTGGATCTCGACCGCCGGCAGCTGACCCCGGTGAGCGACATTGGC
GATCGCGCGCTGTTCCTCGGCAAGGACAAATGCCTGTCCGTCTCGGCCAAACACCTGCCGTCCATCAGAGGAAACTCTGT
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>chr6A_1690
--------------------------------------------------------------------------------
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-----------------------------------------------------CGGCGGCTGGGCGTCCCTGCCCACGGA
CATAGTAGGCCTCGTCACCCGCCGGCTTCTGGGCGAGGGCGACGGCGACGTGGTCGACTACATCTGCTTCCGCGCCGTCT
GCTCCTACTGGCGCGCCTGCACGCCCGCGCCTCGCGACTCCGACCTGCGGGACCCTC---------GCCTCCGCCCGCGC
GGCTGGGTCGCGCTCTGCGACGGCGACGCCGTCCGCCCGGACGACGCCTGCGAGATCGCCTTCTTCCACACGCGCACGGC
CAGGCGCCTCCGCGTCCCCCTGCCGGAG---CTCCGGCGGCACAGGGTCGTCGGCTTCACCGACGGCCTCGTCGTCCTCT
TGCACGAGCGCACCATCGCGGTCCGCGTGCTGCACCCGTTCACGTGCGACGCCGTCGACTTCCCGCCCCTCCTCACCATG
TACCTCCAGGTGGTCAGGCAGAAGGCG---------TCCCTGCTCGACATGAACGCCGCGGTGTGCAGCAGCGCGTCCTC
CTCCTCCGCAGACTCCTCCATCGCCGTGGTGGTCTGGTTCCC--------------------------------------
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----------------------------------------------
>SNPs
-SS---SS------S------SS-----S---S------------------------------S---S--S------SS-
-------S------------------------------------------------------------------------
-------------------S--------------------------------------------S---------------
------------------------S-----------------------------------------------S-------
------------------S---SS-S--------------SS----------------S-------S-------S-----
----------SS--------------------S----------------------S------S-----------------
----------------------------------S--------S--S---------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------S------S-------S
-----------------S--S-----------------------------------------S-----------------
-----S--------------------------------------------------------------------------
--S---------------------S--------------S---------S-S--S-------------------------
--S-----------------------------S-S----------------------------------S---------S
----------------------------------S------------S----S-SS------------S---SSSSSSSS
SS------------------------------------------------------------------------------
-------------------------------------------------------SS---------------------S-
SS---S-----S----------------S--S------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------SS-------------------------------------------------------------------S--
---------------------------------------------------------------------S----------
--------------------------------------------------------------------------------
------------------------------------------S------------------------------S------
------------------------------------------------------S-------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------S-------------
----------------------------------S---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------S---------------------------------------------------------
---------------------------------------S----------------------------------------
----------------------------------------------------------------------------S---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------S--------------------------------------------------------S-----
--------------------------------------------------------------------------------
----------------------------------SS--------------------------S--------------S--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------S-------------------------------------S--------------------
-------------------------------------------S------------------------------------
--------------------------------------------------------------------------------
------------------------------------------S-------------------------------------
------------------------------------------------S-----------------S-------------
-----------------------------------------S----------S--S-S----------------------
---------SS----------------------------------------------------------S---S------
-----S---------S-------------------------------------------S-S------------------
-----S-----------------------------------S-SSSS-------------------------S-------
-----------------SS-SSS--SS---------S-----------------SSSSSSSSSSSSSSSS---------S
-------S-----------------------------------------------------------S-----------S
---------------------------------------S--------------------S-S------S----------
--S-------S-------------------------------------S--------------------S--SS------
------------------S-------------------------------------------------------------
----------------------------------------------
>forward_1269
--------------------------------------------------------------------------------
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-------------------------------------------------AGCTCAGTATCGGGGTCCAA-----------
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----------------------------------------------
>reverse_2840
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------TGCTTTCCTGTGGACACCC----------------------
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----------------------------------------------
>forward_2743
--------------------------------------------------------------------------------
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---ACTGGGACGCCATCTACCTT---------------------------------------------------------
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----------------------------------------------
>reverse_4388
--------------------------------------------------------------------------------
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-------------------------------------------------------------------ACAATACTCGGCG
GTTGCAA-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------
