>input_sequence_37160
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--------------------------------------------ATGAGCTTTCGGCCTGGGCCGAGGAATAATTCCGTC
TCTTTCTTCTCCCACTTCCCTTCCTGTCCTATCGTGTCCTCTCCCAA--------TTGCCGCAGTCCTCATCTCTCCCCC
TCCCGGAGGCCGGAGCACGCAGGAGATCGACTTCGCCGCGCCGGCTCGCCGGCGACGACACACCCCCACAGGCGCGAATC
TA------------TCTCTCTCTCCATATCCCGCTCTGTTTCAAAAACTTTCCTGCCATCCTCGTACTTCACGTGCTGTC
TGTGTTTGCCCGATCCCGGGATATGCTAGATCGCTCGTACATGGGATCAGCGGATGGATCATTAACATTTCTTACCGTCT
CTAGTGGAGAGAGCTGTTGCCTAAAGGGTAGTTCGTCGCGGTTAACTGGGACCGCAGTAAGCTAACCATGTCGATTTGTG
CAGGTTTTCTGAACTTGTAGCCTACCAATACCAGTTAGTTAGAAATTTCCTGTTTGTTACCGAAGTACTGTAGATGCTTA
ACCTCTTGATCTCGGGGTATTTGGTGCTTTTTACAGTTAACCCTTACGCATTCCTGCAAAGCAAGCTTGGCGCCACGTGT
TGCTGTTCCAATTCATTCATTCATTCATTGTATAAAGGCATTTTTGGTCGAGTGCAAATCTCTTGTTTCATTTTAGTTTC
TTGTGCACTACTACTGACACTGAAAGCTGTTGCATATTTCAACAGAGTGGTGGTGCGAATAATGAACAAAGGCAGCATCC
ACAAAAAGGAGACGCACGGAACAAGCGACGACATAAGCGAGAACACGCCTGTGGAGAAGGTCAGGGGCCCCAATCTGTTT
GAACGGGCCAAGGAAGAGATCGAGGCTCTTGTGGAGGCTGTTCACGATAAGATGGAGCACCATTCCAGTCCCCGCAGGAA
GGAGGGTGGTAATTTACTTAAGTTGATGTCATTTTGCCTAATTTAACTTTGACAAGTATTGCTTCCTGTTACATACCTTA
AGGTTATGCTCACCGTAGCTTTTCAAGTTTTAGCTTTTCAATTCTTGAGAGCT---------------------------
--------------------------------------------------------------------------------
----------------------------------------------------CATCCGTATC-ACAAGTTTTAGCTTTTC
AATTCTTGAGAGCTGACAGGGTTTGACTGGAAACAGTGCTTCTGTGTTGAATGCTAAGACATAGGCTCACGGGAACTTTC
TGTTTGCTGTTCCTGTTCTGCATATTCAGTTAATTTGTTTGCAGTGATGAACTATTAAGCTGTTGTAGGCTTCTGTGGGA
G----ACTTCACCTTGTTGAGAAGAGTAGTGTTCTTTGTAAAGGAGTTTTGTCTTCTGAG--ACTGGGAACATTTGAATT
TTCAGTTTTGTCCGAGGTGTTATGGAGGTAGCTTGGGCATATGTATTTGAGGTTTATAACTTAACAATCACCCAGAC-TG
AAACAATAG--TTTTGTGTACAAAAATTCAAGCATGAAAAATGTTTCTGAAATAGCACTTATCTAGAAGCTGTATACAAA
GCAGGCCTTCCATTTTGATGGAAGGAAAGAGAAATT--AAGTATATGCAAGAAGGGCAAAGGATAATAGAACCTCCTCTG
AAATCGAGTTTGGAAATTC----------------------TGTTTTGTGTACCAGGGATTTCTAAGACCAAGAACATTT
GGATTTTCAGCTTTGTCTAAGTTATAATGAAGACTTCTTGAGCATACAATTTTATGGTTTATAACCTAACATCACCCAAA
C--TGAAACAATAGAACTTTGTGGACAAAAATTCATCAGGTATAAAAGATGTTTCGGAAATATAGCTTCACTACAAGTTA
CCATTTCGATTGAAGGATGTATCAATAAGGATACAAGAAG-GGCATAATAGATAATCGTACCTCCTTTAAAACCTCTAGT
GTTCAATTCCTTTATTCCTGATTCTTTGTGTTACTTTCCTCATACATGGTAGTTGTGGTTCTTTGGT-AGTGCTCTGTTT
AGTACCCCGTCTTGATTTTTATCCACCGCTCTGATTTACCTGCAGAATTGCACAAGGATTCCAAGGAACACAGTGAGGCA
AACATGCATAAGAAGACCCATGAGAACGAAACTCATGGTACAAGCAATCATATAAGTGAGGACACGCCTGTCAGCAAAGT
CAAAGGCCCGGGCGTGTTTGAACGTGCCAAGGAAGAGATCGAAGCTATCGTTGAGGCCATCCATCCGAAGAAAGAATCCG
ACAAGTGA------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------
>chr5A_1_TraesCS5A01G192500
TAATCCGTTACTTGTTGAGGAAGGGAGAAGAAGCAACTGGCAGTGCAAGAAGTAGTGCATACTTGCCAGCGTCGATGAGG
ATGTTAGAAGTGCGAGACGGCGTGACATGACGCAGGAGAATGGAGGTGTTGCGCCTTCGGTTCCGGTTCCCCGGCTCTGC
TGCCTTGGTGCAAACCTGCGAACAGGACATAACAAACAAACAGCCAACATCACACCGAGCGGCGAGCACTGTGAGAAAGC
AGAA-CAAAGTGGGTCCACCGGCGGTTGATAACGAGATGCAGGTGGAGGGTCATACGGGGCAAGTCTTGGAGGGGTCGGT
GAGGCAGCTGACGCGCGGGACGCCCTCGCTGGTGCCAGTGCCGAGGAAGATGAGCTCCGACTTCCGCGGCTCATCATGCT
CCGCCGCCGAGGAAGAGACAGCGTTGCCAGGGGCGCCGCAGGAGGAGGAGAAGAAGCGCGCTGGAAGGTTCACCAGGGGT
ACAGGCATTACGTCGAACAGCCGAGGCGCAACCAGTAAACTATGCAATTACGATTGTATATACGTACGCGAAGCGCCGGA
GCGGAGGCGCACGAGGGGGAGGCGTGAGGAGAGCGGCGCGGCGGCCGCCGCGGCGCGGAGAGGGAGATGCGCGCCCAGTG
AGCGGGCCGCGGCGAGCGAGCACGCGAACGGCGAATGCAGCATGGGCAAGCGGTGGGCGCGCAGGAGAGCGGCGATCGCG
CCCGCGGCGGTTGCTCCAGACATCGGGAGAGCGCGGATGCGTCTGTCTGCCTTGCGGCGGCGGCCGGCGAGTCGGTAACG
ACGGGGTCTCCGCGGACGCTGGCCACTTGTCGT--------CCTCGCGGCGGGAGGGG-GCGACGCTGGCAAGTGGGCCC
GA-GTTCCCTGCCCGACGCTCAAGAAAAGCCGCGCGGCTCTTCCGACGGCCCTGTC------------------------
-----------ACTGACATGT--------------------------------------GGGCCAATAGTCCAGAGAGCC
CTGACCACTGACATGTGGGTCAACAGACCATAAGTGGGCTTTACATGAGCTTTCGGCCTGGGCCGAGGAATAATTCCGTC
TCTTTCTTCTCCCACTTCCCTTCCTGTCCTATCGTGTCCTCTCCCAA--------TTGCCGCAGTCCTCATCTCTCCCCC
TCCCGGAGGCCGGAGCACGCAGGAGATCGACTTCGCCGCGCCGGCTCGCCGGCGACGACACACCCCCACAGGCGCGAATC
TA------------TCTCTCTCTCCATATCCCGCTCTGTTTCAAAAACTTTCCTGCCATCCTCGTACTTCACGTGCTGTC
TGTGTTTGCCCGATCCCGGGATATGCTAGATCGCTCGTACATGGGATCAGCGGATGGATCATTAACATTTCTTACCGTCT
CTAGTGGAGAGAGCTGTTGCCTAAAGGGTAGTTCGTCGCGGTTAACTGGGACCGCAGTAAGCTAACCATGTCGATTTGTG
CAGGTTTTCTGAACTTGTAGCCTACCAATACCAGTTAGTTAGAAATTTCCTGTTTGTTACCGAAGTACTGTAGATGCTTA
ACCTCTTGATCTCGGGGTATTTGGTGCTTTTTACAGTTAACCCTTACGCATTCCTGCAAAGCAAGCTTGGCGCCACGTGT
TGCTGTTCCAATTCATTCATTCATTCATTGTATAAAGGCATTTTTGGTCGAGTGCAAATCTCTTGTTTCATTTTAGTTTC
TTGTGCACTACTACTGACACTGAAAGCTGTTGCATATTTCAACAGAGTGGTGGTGCGAATAATGAACAAAGGCAGCATCC
ACAAAAAGGAGACGCACGGAACAAGCGACGACATAAGCGAGAACACGCCTGTGGAGAAGGTCAGGGGCCCCAATCTGTTT
GAACGGGCCAAGGAAGAGATCGAGGCTCTTGTGGAGGCTGTTCACGATAAGATGGAGCACCATTCCAGTCCCCGCAGGAA
GGAGGGTGGTAATTTACTTAAGTTGATGTCATTTTGCCTAATTTAACTTTGACAAGTATTGCTTCCTGTTACATACCTTA
AGGTTATGCTCACCGTAGCTTTTCAAGTTTTAGCTTTTCAATTCTTGAGAGCT---------------------------
--------------------------------------------------------------------------------
----------------------------------------------------CATCCGTATC-ACAAGTTTTAGCTTTTC
AATTCTTGAGAGCTGACAGGGTTTGACTGGAAACAGTGCTTCTGTGTTGAATGCTAAGACATAGGCTCACGGGAACTTTC
TGTTTGCTGTTCCTGTTCTGCATATTCAGTTAATTTGTTTGCAGTGATGAACTATTAAGCTGTTGTAGGCTTCTGTGGGA
G----ACTTCACCTTGTTGAGAAGAGTAGTGTTCTTTGTAAAGGAGTTTTGTCTTCTGAG--ACTGGGAACATTTGAATT
TTCAGTTTTGTCCGAGGTGTTATGGAGGTAGCTTGGGCATATGTATTTGAGGTTTATAACTTAACAATCACCCAGAC-TG
AAACAATAG--TTTTGTGTACAAAAATTCAAGCATGAAAAATGTTTCTGAAATAGCACTTATCTAGAAGCTGTATACAAA
GCAGGCCTTCCATTTTGATGGAAGGAAAGAGAAATT--AAGTATATGCAAGAAGGGCAAAGGATAATAGAACCTCCTCTG
AAATCGAGTTTGGAAATTC----------------------TGTTTTGTGTACCAGGGATTTCTAAGACCAAGAACATTT
GGATTTTCAGCTTTGTCTAAGTTATAATGAAGACTTCTTGAGCATACAATTTTATGGTTTATAACCTAACATCACCCAAA
C--TGAAACAATAGAACTTTGTGGACAAAAATTCATCAGGTATAAAAGATGTTTCGGAAATATAGCTTCACTACAAGTTA
CCATTTCGATTGAAGGATGTATCAATAAGGATACAAGAAG-GGCATAATAGATAATCGTACCTCCTTTAAAACCTCTAGT
GTTCAATTCCTTTATTCCTGATTCTTTGTGTTACTTTCCTCATACATGGTAGTTGTGGTTCTTTGGT-AGTGCTCTGTTT
AGTACCCCGTCTTGATTTTTATCCACCGCTCTGATTTACCTGCAGAATTGCACAAGGATTCCAAGGAACACAGTGAGGCA
AACATGCATAAGAAGACCCATGAGAACGAAACTCATGGTACAAGCAATCATATAAGTGAGGACACGCCTGTCAGCAAAGT
CAAAGGCCCGGGCGTGTTTGAACGTGCCAAGGAAGAGATCGAAGCTATCGTTGAGGCCATCCATCCGAAGAAAGAATCCG
ACAAGTGAAGATCGGGCGCATCGTGTACACTGTGTCTTCAGAATTTTCAGTGGCTGTGAAAACTATGTGGGCTATGTCCA
GGTGGATGCATTATTTGCGTCATATCCACATGCAAGCTTTGTATTTTGCATTGCCAAACTCTATCGCTGCACGAGCTGAA
T--GCTCCATCGTATCGCCGCCGCTTAC-GTTGAGCAGAAGCTGTATAAAATGTGACATGACTGTACAACTACTTTGTTG
TGTTTGAATTGCCAAGAAGCTTTATGCAATTTATCACTTGACACTTTTGTCATTTGCTC-GGGCACACCGTAAACCTTCT
AGGTGCCATAAATGGGATGGGTTTCATTGGTTGAAACACTGCTTTGATACAATGGTGTGGCGATGTCTCAG-AACTGTAG
CTGGGAAAAAAGAAAGAGATTTTATTTTATTTTTTGCGGGTGAAAAAGAAAGAGATTTTAGCAGCTTGGTCGCCTTGTTT
GTTTGGTCGATTTTCGGAAAGAGCGCAGCGACAGGGTATATCCAACAACGAGGCCACCC---------------------
-----TCATCCGCCTTTGGCTTAGTGGGGAAATAATTCTAAAACCAAAATTCAAGACCACATCCCAGTATAGGTTCAGTG
TAGCACTAATTCAAATATTGATAGAAGCATATATATAGTACTCCCTCTGTAATGAAATATAAGAGCGTTTAGTGATCTAA
ACGCTTTTATATTTCTTTACAAAGGAAGTAGCAAGTTATCTACTGGAGGCCTCCCCGCCGCCACCAAAAACAATCTCACC
CACCGCCAAATCCACCTGCCGCCGCCGGAGGAAGCCACCAAGGCTGATGGCGGCGGCGGGGCTCCCCACGCCCCCACTTT
CCCCTCTCCCCACCCCCTTTTCTCTCCCATGTCGTCGATCTACATTTCATCTTTAGGCCGGCCGCATTCGTCCATTGGTG
GTGCATCGGATGACTTCTCGCGGGCACATGACCCCGCCGCTGTTGCTTTTGGGCTCAGCTCTCCTCTGAACCCGCGCCA
>chr5D_1
TAATCCGTTACTTGTTGAGGAAGAGAGGAGAAGCAACTGGCAGTGCAAGAAGTAGCGCATACTTGCCAGCGTCGATGAGG
ATGTTAGAGGTGCGAGACGGCGTGACATGGCGCAGGAGAATGGAGGTGTTGCGCCTTCGGTTCCGGTTCCCCGGCTCTAC
TGCCTTGATGCAAACCTGCGAACAGGACATGACAAACAAACAGCCAACATCACGCCGAC-------CACTGTGAGAAAAG
AGAACCAAAGTGAGCCCACCGGTGGTTGATACCAGGATGGAGGTGGAGGGTCATACGGGGCAAGTCTTGGAGGGGTCGGT
GAGGCAGCTGACGCGCGGGACGCCCTCGCTGGTGCCAGTGCCGAGGAAGATGAGCTCCGACTTCCGCGGCTCCTCGTGCT
CCGCCGCCGAGGAAGAGACAGCGCTGCCAGGGGCGCCGCAGGAGGAGGAGAAGAAGCGCGCTGGAAGGATCACCACGGGT
ATAGGCATTACGTCGAACAGCTGAGGCGCAACCAGTACATAATGCAATTACGGTTTTATTTACGTACGCGAAGCGCCGGA
GCGGAGGCGCGCGAGGGAGAGGCGGGAGGAGAGCGGCGCGGCAGCCGCCGGGGCGCGGGGAGGGAGATGCGCGCCCAGGG
AGCGGACCGCGGCGAGCGAGCACGCGAACGGCGAATGCAGCATGGGCAAGCGGTGGGCACGCAGGAGAGCGGCGATCGCG
CCCGCGGCGGTGGCCCCAGACATCGGGAAAGCGCGGATGCGTCTGTCTGCCTTGCGGCGGCGGCCGGCGAGTCGGTATCG
ACGGGGTCTCCGCGGACGCTGGCCACTTGTCGCCTGTCTGACCGCGTTGCGGGAGGGG-GCGACGCTGGCAAGTGGGCCC
GATGTTCCCTGCCTGACGGTCAAGAAAAGCCGCGCGGCTCTTCCGACGGCTTTGTTAACTTTTTTTTTTTAGGGGTACGA
CGGCTTTGTTAACTGACATGTGGGTCAAAAAATAGTCTAGATTTTTTTTTTGAGAATCCGGGTCAATAGTCTAGAGATCC
CTGTTTACGGACATGTGGGTCAACAGGCCGTAAGTGGGCTTTACATGGGCTTTTATCCTGGGCCGAGGAATAATTCCGTC
TCTTTCTTCTCCCACTTCCCTTCCTGTCCTATCGTCTCCTCTCCCCAATTGCCAGTTGCCACGGTCCGCATCTCT-CCCC
TCCCGGAGGCCGGAGCACGCAGGAGATCGACTTCGCCGCGCCGGCTCGCCGGCGACGACACACCCCCACAGGTACGAATC
TC------------TCTCTCTA--CCTCTCTCGCTTTGTTTCAAAAACTTTCTTGGCATCCTTGTACAT---GTGCTGTT
TGTGTTTGCCCGATCCCGGGATAGGCTAGATCGCTGGTACATGGGATCAGCCGATGAATGATTAACATTTCTTGCCGTCT
CTAGTGGAGAGAGTTGTTGCCTAAAGGGTAGTTCGTCGCGGTTAGCTGGGACCGCAGTAAGCTAACCATGTCGATTTGTG
CAGGTTTTCTGAACTTGTAGCCTACCAATACCAGTTAGTTAGAAATTTCCTGTTTGTTACCGAAGTACTGTAGATGCTTA
ACCTCTTGATCTCGGGGTACTTAGTGCTTTTTACAGTTAACCCTTACGCATTCCTGCAAAGCAAGCTTGGCGCCACGTGT
TGCTGTTCCAATTCATTCATTCATTCATTGTATAAAGGCATTTTTGGTCGAGTGCAAATCTCTTGTTTCATTTTAGTTTC
TTGTGCACTACTACTGACACTGAAAGCTGTTGCATATTTCAACAGAGTGGTGGTGCGAATAATGAACAAAGGCAGCATCC
ACAAAAAGGAGACGCACGGAACAAGCGACGACATAAGCGAGAACACGCCTGTGGAGAAGGTCAGGGGCCCCAATCTGTTT
GAACGGGCCAAGGAAGAGATCGAGGCTCTTGTGGAGGCTGTTCACGATAAGATGGAGCACCATTCCAGTCCCCGCAGGAA
GGAGGGTGGTAATTTACTTAAGTTGATGTCATTTTGCCTAATTTAGCTTTGACAAGTATTGCTTCCTGTTACATACCTTA
AGGTTATGCTCACCGTAGCTTTTCAAGTTTTAGCTTTTCAATTCTTGAGAGCT---------------------------
--------------------------------------------------------------------------------
----------------------------------------------------CATTCGTATCCACAAGTTTTAGCTTTTC
AATTCTTGAGAGCTGACAGGGTTTGACTGGAAACAGTGCTTCTGTGTTGAATGCTAAGACATAGGCTCACGGGAACTTTC
TGTTTGCTGTTCCTGTTCTGCATATTCAGTTAATTTGTTTGCAGTGATGAACTATTAAGCTGTTGTAGGCTTCTGTGGGA
G----ACTTCACCTTGTTGAGAAGAGTAGTGTTCTGTGTAAAGGAGTTTTGTCTTCTGAG--ACTGGGAACATTTGAATT
TTCAGTTTTGTCCGAGGTGTTAAGGAGGTAGCTTGGGCATATGTATTTGAGGTTTATAACTTAACAATCACCCAGAC-TG
AAACAATAG--TTTTGTGTACAAAAATTCAAGCATGAAAAATGTTTCTGAAATAGCACTTATCTAGAAGCTGTATACAAA
GCAGGCCTTCCATTTTGATGGAAGGAAAGAGAAATT--AAGTATATGCAAGAAGGGCAAAGGATAATAGAACCTCCTCTG
AAATCGAGTTTGGAAATTC----------------------TGTTTTGTGTACCAGGGATTTCTAAGACCAAGAACATTT
GGATTTTCAGCTTTGTCTAAGTTATAATGAAGACTTCACGAGCATACAATTTTATGGTTTATAACCTAACATCACCCAAA
C--TGAAACAATAGAACTTTGTGGACAAAAATTCATCAGGTATAAAAGATGTTTCGGAAATATAGCTTCACTACAAGTTA
CCATTTCGATTGAAGGATGTATCAATAAGGATACAAGAAG-GGCATAATGGATAATCGTACCTCCTTTAAAGCCTCTAGT
GTTCAATTCCTTTATTCCTGATTCTTTGTGTTACTTTCCTCATACATGGTAGTTGAGGTTCTTTGGT-AGTGCTCTGTTT
AGTACCCCGTCTTGATTTTTATCCACCGCTCTGATTTACCTGCAGAATTGCACAAGGATTCCAAGGAACACAGTGAGGCA
AACATGCATAAGAAGACCCATGAGAACGAAACTCATGGTACAAGCAATGATATAAGTGAGGACACGCCTGTCAGCAAAGT
CAAAGGCCCGGGCGTGTTTGAACGTGCCAAGGAAGAGATCGAAGCTATCGCTGAGGCCATCCATCCGAAGAAAGAATCCG
ACAAGTGAAGATCGAGCGCATTGTGTACATTGTGTCTTCAGTATTTTCAGTGGCTGTGAAAACTATGTGGGTTATGTCCA
GGTGGATGCATTATTTGCATCATATCCT--TGCAAACTTTGTATTTTGCATTGCCAAACTCTATGGCTGCAAGAGCTGAA
TGCGCTTCATCGTATCACCGCTGCTTACGGTTGAGCAGAAGCTGTATAAAGTGTGACATGACTGTACAACTACTTTGTTG
TGTTTGAATTGCCAAGAAGCTGTATGCAATTTATCACTTGACACTTTTGTCATTTGCTC-GG-CACACCGTAAACCTTCT
AGGTGCCATAAATGGGATGGATTTCATTGGTTGAAACACAGCTTTGATACAGTGGTGTGACGGTGTCTCAG-AACTGTAG
CTGAAAAAAAA-----------------------------------------AGATTTTAGCAGCTTGG---CCTTGCTT
GTTTGGTCGATTTTTGGAAAGAGCGCAGTGACAGGGTATATCGAACAACGAGGCCACCCCGATCCCCTTCATAAGATGAC
CATCCTCATCTGCCTTTGGCTTAGCGGGGAGATAATTCTAAAACCAAAATTCAAGACCACATCCCAGTGTAGGTTTAGTG
TAGAACT------AATATTGATAGAAGCATATATATAGCACTCCCTTCATAATGAATTATAAGATCGTTTAGTGATCTAA
ACGCTCTTATATTTTTTTATAGAGGGATTAGCAAGTTATCTA--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------
>chr5B_25
------------------------GAGGAGAAGCAACTGGCAGTGCAAGAAGTAGCGCATACTTGCCAGCGTCGATGAGA
ATGTTAGAGGTGCGAGACGGCGTGACATGGCGCAGGAGAATGGAGGTGTTGCGCCTCCGGTTCCGGTTCCCTGGCTCTGC
TGCCTTGGTGCAAACCTGCGAACAGGACATAACAAACAAACAGCCAACATCACACCGAGCAGCGAGCACTGTGAGAAAGC
AGAA-CAAAGCGAGTCAACCGGCGGTTGATAACGAGATGTAGGTGGAGGGTCATACGGGGCAAGTCTTGGAGGGGTCGGT
GAGGCAGCTGACGCGCGGGACGCCCTCGCTGGTGCCCGTGCCGAGGAAGATGAGCTCCGACTTCGGCGGCTCCTCGTGCT
CCGCCGCCGAGGAAGAGACAGCGCTGCCAGGGGCGCAGGAGGAGGAGGAGAAGAAGCGCGCTGGAAGGATCACCACGGGT
ACAGGCATTACGTCGAACAGCCGAGGCGCAACCAGTAAACTATGCAATTACGATTGTATA--CGTACAGGAAGCGCCGGA
GCGGAGGCGCGCGAGGGAGAGGCGGGAGGAGAGCGGCGCGGCGGCCGCCGGGGCGCGGGGAGGGAGATGCGCGCCCAGAG
AGCGCGCGGCGGCGAGCGAGCACGCGAACGGCGAATGCAGCATGGGCAAGCGGTGGGCACGCAGGAGAGCGGCGATCGCG
CCCGCGGCGGTGGCCCCAGACATCGGGAAAGCGCGGATGCGTCTGTCTGCCTTGCGGCGGCGGCCGGCGAGTCGGTATCG
ACGGGGTCTCCGCGGACGCTGGCCACTTGTCGCCTGTCTGACCGCGTTGCGGGAGGGGAGCGACGCTGGCAAGTGGGCCC
GATGTTCCCTGCCTGACGGTCAAG-AAAGCCCCGCGCCTCTTCCGACGGCCCTGTC------------------------
-----------ACTGACATGT--------------------------------------GGGTCAATAGTCCAGTGAGCC
CTGTTCACTGACATGTGGGTCAACATACCATAAGTGGGCTTTACATGGGCTTTCAGCCTGGGCCGAGGAATAATTCCGTC
TCTTTCTTCTCCCACTTCTCTTCCTGTCCTATCGTCTCCTCTCCCAA--------TTGCCAGAGTCCGAATCTCTCGTGC
TCCCGGAGGCCGGAGCACGCAGGAGATCGAATTCGCCGCGCCGGCTCGCCGGAGACGACAGACCCCCACAGGCACGAACC
TATCTCTCTCTCTCTCTCTGTCTCCCTCTCCCGCTCTGTTTCAAAAACTTTCTTGCCATCCTCGTACTTCACGTGCTGTC
TGTGTTTGCCCGATCCCGGGATAGGCTAGATCGCTCGTCCATGGGATCAGCCGATGAATGATTAACATTTCTTGCCGTCT
CTAGTGGAGTGCCAAAAG------------GTTCGCCGCGGTTAGCTGGGATCGCAGCAAGCTAACCATGTCGATTTGTG
CAGATTTTCTGAAGTTGTAGGCG------ACCAGTTTATTAGAAATTTCCTGTTTGTTACCGAAGCACTTTAGATGCTTA
ACCTCTTGATCTCGGGGTACTTGGTGCTTTTTTTAGTTAACCCTTATGCCTTCCTGCAAAGCAAGCTTGGCACCACGTGT
TGCTGTTCCAATTCATTGTATG------------AAGGCATTTTTGGTCGAGTGCAAATCTCTTGTTTCATTTCAGTTTC
TTGTGCACTACTACTGACACTGAAAGCTGTTGCATATTTCAACAGAGTGGTGGTGCGTATAATGAACAAAGGCAGCATCC
ACAAAAAGGAGACGCACGGAACAAGCGACGACATAAGCGAGAACACGCCTGTGGAGAAGGTCAGGGGCCCCAATCTGTTT
GAACGGACCAAGGAAGAGATCGAGGCTCTTGTGGCGGCTGTTCACGATAAGATGGAGCACCATTCCAGTCCCCGCGGGAA
GGAGGGTGGTAATTTACTTAAGTTGAAGTCATTTTGCCTAATTTAACTCTGACAAGTATTGCTCCAA-TTACATACCTTG
AA-TTATGCTCACAGTAGAAATTAGATGGGAAGAAAGATGGGTAGGATAAGAGAGGAACAACAATGGTCCAATAGAGTGA
AAATTCACATCTTTGTGCTCCTTTGCCTATGGGGCTTGTCCAATTGAGAGTGTTTATACCACTCAAATTGTTCTTTTCTG
AACCGAGTCTACCTAAGTTACAACCTTAGGACTTGCCATTTTGCAATAGAAGCAATCATATCCGCAAGTTTCAGCTTTTC
AATTCTTGAGAGCTGACAGGGTTTGACTGGAAACAGTGCTT-TGTGTTGAATGCTAAGACATGGGCTCACAGGAAATTTC
TGTTTGCTGTTTCATTTCTGCATATTCAGTTAATTTGTTTGCAGTGATGAACTATTAAGCTGTTGTAGGTTTCTGTGGTA
TTTTCACTTCACCTTGTTGAGAAGAGTAGTGTTCTGTGTAACGGAGTTCTGTTTTCTGAGAGACTGGAAACATTTGAATT
TTCCGTTTTGTCCAAGGTGTTATGGAGGTAGTTTGGGTGTATGTATTTGAGGTTTATAACTTAACATCACCAAGACTTTG
AAACAATATAATTTTGTGGACAAAAATTCAAGCATGAAAAATGTTTCTGAGACATCACTTCTCTAAAAGCTATATACAAA
GCAGGCCTTCCATGTTAATAGAAGAAAAAAGAAATATAAAGTATATACAAGAAGGGCAAAGGATAATAGTACCTC--CTG
AAATCAAGTTTGGAAATTCATTTCACCTTGTTGAGGAGTAGTGTTTTGTGTACCGGAGATTTCTGAGACCAAGA---TTT
GGATGTCCAGCTTTGTC-AAGTTATAATGGGAACTTCTTGAGCATACAATATTATGGTTTGTAACCTAATATTACCCAAA
CTTTGAAACAATAAAACTTTGTGACCAAAAATCATCA--GTATAAAAGATGTTTCTGAAATATAGCTTCTCTAGAAGCAA
CCATTTTGATTGAAGAATAGAGTAATAAGGATATACAAGAAGGAGTAAAGGATAACAGTACCTCCTTTGGAAC--CTAGT
ATTCAATTCCTTCATTCCTGATTCTTTGTGTTACTTTCCTCATACATGGTAGATGAGGTTCTTTTGGCAGTGCTCTGTTT
AGTACCCTGTCTTGATTATTATGCACCGTTCTAATTTACCTGCAGAATTGCACAAGGATTCCAAGGAACACAGCAAGGCA
GACATGCATAAGAAGACCCACGAGAACGAAACTCATGGTACAAGCAATGATATAAGTGAGGACACGCCGGTCAGCAAAGT
CAAAGGCCCGGGCGTGTTTGAACGTGCCAAGGAAGAGATCGAAGCTATCGTTGAGGCCATCCATCCGAAGAAAGAATCCG
ACAAGTGAAGATCGACCGCATCGTGTACATTGTGTCTTCAGTATTTTCAGTGGCTGTGAAAACTATGTGGGCTATGTCCA
GGTGGATGCATTATTTGCATCATATCCACTTGCAATCTTTGTATTTTGCATTGCCAAACTCTATCGCTGCAAGAGCTGAA
T--GCTCCATCGTATCGCCGCCGCTTAC-GTTGAGCAGAAGATGTATAAAATGTGACATGACTGTACAACTACTTTGTTG
TGTTTGAATTGCCAAGAAGCTGTATGCAATTTATCACTTGACACTTTTGTCATTTGCTTGGG-CACACCGTAGACCTTCT
AGGTGCCATAAATGGGATGGATTTCATTGGTTGAAACACTGCTTTCA-ACAATGGTATGGCGGTGTCTCGGAAACTGCAG
CTGAAAAAAAA-----------------------------------------AGATTTT-GCAGCTTGGTCACCTTGCTT
GTTTGGTCGATTTTCGGAAACAGCGCAGCGACAGGGTATATCCAACAATGAGGCCACCCCGATCCCCTTCATAAGATGAC
CATCCTCATCCGCCTTTGGCTTAGTGGGGAAATAATTCTAAAACCGAAATTCAGGACCACATCCCAGTGTAGGTTTAGTG
TAGCACTAATTCAAATATTGATAGAAGCATATATA--GTACTTCCTCCGTAATGAAATATAAGAGCGTTTAGTGATTCTA
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------------
>SNPs
-----------------------S---S---------------------------S------------------------
--------S--------------------S--------------------------------------------------
------------------------------------------------------------S-------------------
------------S--------------------------S----------------------------------------
------------------------------------------------------------------------S--S----
-----------------------S--------------------------------------------S------S----
--------------------------------------------------------------------------------
----------S------S------S-------------------------S-------S-------------------S-
----------------------------------------------------------S---------------------
-----------S--S-------------S------------------------------------------------S--
--------------------------------S----------S--SS--------------------------------
-------------S----S-------------------------------------------------------------
--------------------------------------------------------------S-----------------
---SS------------------------------------------S------S-------------------------
-----------------------------------S------------------------S------S------------
-------------------------------------------------------------------------S------
-------------------------S-S------------------------S---------------------------
-----------------------S---------------------------S----S--S-------------S------
-------------S------------------------------S-----------------------------------
--------------------------------------------------------------------------------
-------------------S------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------S------------------------
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-----------------------------------S--------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------S------------------------------
-------------------------------------------------------S------------------------
--------------------------------------------------------------------------------
------------------------------------------------S-------------------------------
--------------------------------------------------------------------------------
--------------S--------------S-----------S--------------------------------------
------------------S----------S-----S-----------------------------------S--------
--------------------------------------------------------------------------------
---------------------S----------------------------------------S-----------------
--------------------S-----------------------------------------S-----------------
---SS------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------------S-----S--
--------------------------------------------------------------------------------
--------------------------------------------------------------------S------S----
-----------------------------------------------S--------------------------------
-----S--------S----S-S---S-S--------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_280
--------------------------------------------------------------------------------
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--------------------GGCGGTTGATAACGAGATGC----------------------------------------
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>reverse_1384
--------------------------------------------------------------------------------
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-----------------------TGCTAGATCGCTCGTACATGG------------------------------------
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>forward_1023
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------CCTGTCACTGACATGTGGGC-----------------
--------------------------------------------------------------------------------
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>reverse_3176
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------TGGTTCTTTGGTAGTGCTCTGT---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------
>forward_1485
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------GGGTAGTTCGTCGCGGTTAA-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------
>reverse_3455
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------GGCGCATCGTGTACACTGT-----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------
