>input_sequence_37112
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--------------------------------------------------------ACAGAAAAGCTCG------AGCTC
TTGCTTGGGTGGACGAGCGAGCAGAGCGCCGATCGCAGCAGTAGCAGC---AGGAGGAAGATGTCGTCGGTGTTCAGCGG
CGATGAGACCGCCCCCTTCTTCGGCTTTCTCGGCGCCGCCGCGGCGCTCGTCTTCTCATGTACG----------------
---------------------------------------------------------------------------CCCTC
TTCCATCTCTTGTAAACTTGCCAGCCT-TTGTGTAGCTTACATATGTTTGGGGGAACACGGTTGGAGCTCTGATCCGCCC
GGATCGGCGGAGCGTTGTCCCTTCTAGCGTGCGCGTCTTTCGATTCCGTAGATTCGATTCGTTTAGCTGACGAGACGAAG
CGCGCGCTTTGGTCTTGGGTTAGTCCCTGCGATCGTTGACGAGATCTCTCCGTGTCCCTGTCTTGCAGGTATGGGAGCGG
CCTACGGGACGGCCAAGAGCGGCGTCGGCGTGGCGTCCATGGGAGTCATGCGCCCGGAGCTCGTCATGAAGTCCATCGTG
CCCGTTGTCATGGCTGGAGTGCTCGGTATCTACGGGCTTATTATCGCCGTCATCATCAGTACCGGGATCAACCCCAAGGC
CAAGCCCTACTACCTCTTCGACGGCTACGCCCACCTCTCGTCCGGCCTCGCCTGTGGCCTTGCAGGCCTTGCTGCTGGCA
TGGCCATCGGCATTGTTGGTGATGCTGGAGTCAGGTAAGCTCAATTTATCATCTCTTATTGTGTTATACGCACTGATTTT
GCTGGTATGTTGGTTTGTTGATGACTAATTTGCATTGTTAATGCACATCCCTCACGCCTGTGCCTACATAGTACTAGTAG
CTAGCA--------------------------------------------------------------------------
-------------------------------------------------------------------------------G
GCGCATGTGTTGCATTTGAAGGGATGCATTTAGGTGGATGATTCTGACCCAATT--TCATAGGCCTGATTCTGTTTGAGA
TTTGAATCTCTGTAGGCTCGCTGTTCAAGTTTCATTTATTTAGTTGTCTCAGTATACTCCAG--TATAGCCTTAACAGAA
GTAAATTTCAGTTACAGCATGGATTATTCTCTACACAAATCCTCTTAGATTGTTTATGACTAGACTAACAATTCATCAAT
AAGCTGAAATCTGAGGATGAACATATGCGAGCTCTTATTATTACTACACTTCTCTCTAGGCATGATATGCTTGTTGTACC
AATTATCTTAGGAAACAATCTTGAGTTATAGAAAAATGACACTGGCTATTTCTTCCCTCACCTACGTACTATAGATGATG
AGCCTTTGTTATGTCAATTACTTCTTTCACCATGAATTTTGTGTAAGTCGGTCTATTTATGGTGGATTTACTTTATATAT
GCTGCTCACCAGACAAAAACATTTTTCAGTGGAACCGCCTTTGTGGATTTATGA-------TACTCTTTGAACTGTATAC
TTTGTATTTGTTCTGGTCTTTGTAGTTTATTAGTTAGTGTGATGTCCTATATGTTTAGTTAGTAGTATGATTCTCTCTGT
TTGTTAAGTTTTGGCAATATGTATGCGTGCAACTATCTGTAAATGGAACTCCCAAACTTGGAACTAAGCTACGCTGGTTC
TAATTCCTTATTAAGGGTTTAGCATTTGTCAATGTTATT-AGTTAGCTCTTTCCTTTCTACTGGTTTGTTGCTTCCTGGG
TAAGACTCTGATAATTGCTAC-----------------------------------------------------------
--------------------------------------------------------GTACACGATTATGTAATTTAATTC
TTTTTCCTTCTATATACTGTTGACTTGATATGCGTGCTTTA-CATCGGAGGATCAATTGGAACTTGCCGAAATTGTACCC
CGTTCTGATCAAACGTCATTGTTTGCAGGGCAAATGCTCAACAGCCCAAGCTGTTTGTCGGCATGATCCTCATCCTCATC
TTCGCAGAGGCGCTCGCTCTCTACGGTCTCATTGTCGGCATCATCCTGTCATCCCGAGCTGGCCAGTCTCGTGCTG----
----ATTAGGCATGTTCCATACACGCGGCCCTGTGTGCCCTCTTGTTTTATATTATTCAGACAGCAAACTGAGCTCTAGA
GGTTATCATGTCTAGTTTTCATTCTTCTGTTTGGTGGAGAAAAAAACATCTGTAGCAAAGGGAGCTTTGCCCTTGATGTA
CCATTCTTTTTCCGTCTGGATGCTGGGTGGGGGTTGATGCTTATTTATGCACAGTTATTTACCTTTTGGGTCTGGCTGGA
CGGTGTAATCTGGTGAATAAGCGAGAACTT--AATGC-------------------------------------------
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------------------------------------------------------------------
>chr5D_1_TraesCS5D01G130000
ACGCTGATAGCACCGTCATCACCAGCTAGGCGTCGGCAGCACCATCATCTGCAGATGGACCCCGGCAGAGCGATTTGCCG
GGGGTGCTTCGCCTAGACGCCACCACCACCTCCAGCTGGACCCCGGCAGGCTCATGGACTCCGGCTTCGTCTTCCCTATC
GGGAGCCGCCCTCCCGATCTTGTCGGGCTGCGTCCCTCTGGTCCTGGCGAGGGTGACCAGGGCATCGCCCAGGCGCTCTT
TTTGCCCTCCTTGCACTCGATGTAAATGCAGCTGCAACTAATCCTGTCGAGCAGACTCGAGGCAAGGATAAGACCGCAAA
TGAAAGGCGCGGCAAGGTCTCGAGTCTGCTCGACAGGATGGTGCTGCCGACGCCTAGCTGGTGATGACGGTGCTATCAGC
GTTCAGTCGGAGTCCGAGTCGTCGTCTTCGGACTTGACGACCGGATACTCGCCGCCGCCATCTTCACCATCGGTGTCCTC
TTCGTCGCTGTCGCTCGAGAAGATTTCGTCGTCGCTCGAGCTTTCTACGCAGCACCCAAGACAAGCACCTGAAAGCCCGA
AGATCTTGATGAAGAGCGTGTCGGACTCCATCAACTTGAAGTGGAGGACGTGCACCTCCCCAAGATAATGAGCGCGAGCG
AAGGTTTTCCACGGTACACGAACTTCACCCCTGCTTGCC---AGAAATCGTCTTCCA-----GAGACGACTAGTAGATGA
GTAGAGCACGACCCGTGGGTACGCGAAAGGCTGGAACAACGTCAACCACGCAACGCTCCTTCCACGTGGCCCACGAGCAG
TGAGACACCAATTCTACAATCTCCACCCAGACAAGGGCACCGGTGCCCCTCCTGACCGGGCAACCACGGG-TACACGGCC
CCTACATCAAGA-GGGCAAAACCGTCCAGTAAAAAACATTCCGCCCCACCCCGT----CTTCTTCTTGCCCAATCTCCAA
CGCCCTCCTCCTCAGATCAGATCGTGG--AAGCCCAAACCAAATCCCAAAGCGACAACAGAAAAGCTCG------AGCTC
TTGCTTGGGTGGACGAGCGAGCAGAGCGCCGATCGCAGCAGTAGCAGC---AGGAGGAAGATGTCGTCGGTGTTCAGCGG
CGATGAGACCGCCCCCTTCTTCGGCTTTCTCGGCGCCGCCGCGGCGCTCGTCTTCTCATGTACG----------------
---------------------------------------------------------------------------CCCTC
TTCCATCTCTTGTAAACTTGCCAGCCT-TTGTGTAGCTTACATATGTTTGGGGGAACACGGTTGGAGCTCTGATCCGCCC
GGATCGGCGGAGCGTTGTCCCTTCTAGCGTGCGCGTCTTTCGATTCCGTAGATTCGATTCGTTTAGCTGACGAGACGAAG
CGCGCGCTTTGGTCTTGGGTTAGTCCCTGCGATCGTTGACGAGATCTCTCCGTGTCCCTGTCTTGCAGGTATGGGAGCGG
CCTACGGGACGGCCAAGAGCGGCGTCGGCGTGGCGTCCATGGGAGTCATGCGCCCGGAGCTCGTCATGAAGTCCATCGTG
CCCGTTGTCATGGCTGGAGTGCTCGGTATCTACGGGCTTATTATCGCCGTCATCATCAGTACCGGGATCAACCCCAAGGC
CAAGCCCTACTACCTCTTCGACGGCTACGCCCACCTCTCGTCCGGCCTCGCCTGTGGCCTTGCAGGCCTTGCTGCTGGCA
TGGCCATCGGCATTGTTGGTGATGCTGGAGTCAGGTAAGCTCAATTTATCATCTCTTATTGTGTTATACGCACTGATTTT
GCTGGTATGTTGGTTTGTTGATGACTAATTTGCATTGTTAATGCACATCCCTCACGCCTGTGCCTACATAGTACTAGTAG
CTAGCA--------------------------------------------------------------------------
-------------------------------------------------------------------------------G
GCGCATGTGTTGCATTTGAAGGGATGCATTTAGGTGGATGATTCTGACCCAATT--TCATAGGCCTGATTCTGTTTGAGA
TTTGAATCTCTGTAGGCTCGCTGTTCAAGTTTCATTTATTTAGTTGTCTCAGTATACTCCAG--TATAGCCTTAACAGAA
GTAAATTTCAGTTACAGCATGGATTATTCTCTACACAAATCCTCTTAGATTGTTTATGACTAGACTAACAATTCATCAAT
AAGCTGAAATCTGAGGATGAACATATGCGAGCTCTTATTATTACTACACTTCTCTCTAGGCATGATATGCTTGTTGTACC
AATTATCTTAGGAAACAATCTTGAGTTATAGAAAAATGACACTGGCTATTTCTTCCCTCACCTACGTACTATAGATGATG
AGCCTTTGTTATGTCAATTACTTCTTTCACCATGAATTTTGTGTAAGTCGGTCTATTTATGGTGGATTTACTTTATATAT
GCTGCTCACCAGACAAAAACATTTTTCAGTGGAACCGCCTTTGTGGATTTATGA-------TACTCTTTGAACTGTATAC
TTTGTATTTGTTCTGGTCTTTGTAGTTTATTAGTTAGTGTGATGTCCTATATGTTTAGTTAGTAGTATGATTCTCTCTGT
TTGTTAAGTTTTGGCAATATGTATGCGTGCAACTATCTGTAAATGGAACTCCCAAACTTGGAACTAAGCTACGCTGGTTC
TAATTCCTTATTAAGGGTTTAGCATTTGTCAATGTTATT-AGTTAGCTCTTTCCTTTCTACTGGTTTGTTGCTTCCTGGG
TAAGACTCTGATAATTGCTAC-----------------------------------------------------------
--------------------------------------------------------GTACACGATTATGTAATTTAATTC
TTTTTCCTTCTATATACTGTTGACTTGATATGCGTGCTTTA-CATCGGAGGATCAATTGGAACTTGCCGAAATTGTACCC
CGTTCTGATCAAACGTCATTGTTTGCAGGGCAAATGCTCAACAGCCCAAGCTGTTTGTCGGCATGATCCTCATCCTCATC
TTCGCAGAGGCGCTCGCTCTCTACGGTCTCATTGTCGGCATCATCCTGTCATCCCGAGCTGGCCAGTCTCGTGCTG----
----ATTAGGCATGTTCCATACACGCGGCCCTGTGTGCCCTCTTGTTTTATATTATTCAGACAGCAAACTGAGCTCTAGA
GGTTATCATGTCTAGTTTTCATTCTTCTGTTTGGTGGAGAAAAAAACATCTGTAGCAAAGGGAGCTTTGCCCTTGATGTA
CCATTCTTTTTCCGTCTGGATGCTGGGTGGGGGTTGATGCTTATTTATGCACAGTTATTTACCTTTTGGGTCTGGCTGGA
CGGTGTAATCTGGTGAATAAGCGAGAACTT--AATGCAATTGAGTTTTGTCCATTCATCCTCCAATTGA---------GT
ATTATCCTTTTTGCAAAGGAGAAATCCACATGGTTTGAAACTA--------GAATGGGACCCTTTGGTTCAAAAGTATCA
TTAAGAATAGTTTGATTTGTAGGATTAAATTCTATAGGATTTTTTGAATGATTTGTTTTTATACTATCCTACCGAGGAAC
CACTCAAACCTCTTGGAAAAATTC----------------------------------------------------TTCA
TAAGGTAGTAATATCATAGGAATAGGAAACTTGTAAAATTAAGATTCCATGCATCCCAAATCCTATGAATAGAAAATGAT
ATGTCCTTCCTAATGTTTATTTTTCTATGTAATGTGGAGATAGAGAATTCCTTCATAAGAATATGATTTGTATTCCTACA
AACTAGAGAACAGTAAACGAAATTTTTCTATAGAAATTCTATCCTACAAAATTCCTCCAAAACCAAAGGAGGTCTGAATC
CTTCGCCGTTGCGATGTACTAGACGGAATGGTGTGCTCCGCTGTGCTCAAATATAGTGGCGTTTGATACCCACATGGATC
TTTGGCGTTTGATACCCACGCGGATCTTTGGGTGCCGATGCACCTGAACTGTAAAATAATTTAGAAAATTTTAAGAGTAA
AAAATTCTGAATTATTTTGGAATCAAGAATCATCAGGTGTTACACACGTGTGAAAAGTTTCGAGAATTACTTTTCGCACA
AGTGTATGTTCATGTTTGATTCTTGAGAATTACTTTTCACACATGTAATACCTGATCATGTTCGATTATTAGTGATCTTT
GGAAACCTAATTCTAAAGTTTGGGATGAAGGTAAGATTAGTACCTACTTTGATGATACTTTCAAAAATAATGTTTTAAAT
ATTCCTATTATTAATGCTGATATTGATGATACTATATACTGGATTCACACTCCTAATGCTACTTGTACCAATAAAAGTGC
TTATAAAACTTTTATCCAGGAGATCCAGGATAATACTATGAATCATGGATCTCTTGTGACCAATCA
>chr5B_651
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----------ACGATCCACGAACTTCACCGCTGCTTGCCGCCAGAAATCGTGTTCCAGAGACGAGACGACTAGTAGATGA
GTAGAGCACGACCCGTGGGTACGCGAAAGGCTGGAACAACGTCAACCACGCAACGCTCCGCCCACGTGGCCCGCGAGCAG
TGAGACACCAATTCTACAATCTACACCCAGACAAGGGCACCGGTGCCCCTCCTGACCGGGCAACCACGGG-TACACGGCT
CCTACATCCAGAGGGGCAAAACCGTCCAGTAAAAAACATTCCGCCCCACCCCGT----CTTCTTCTTCCCCAATCTCCAA
CGCCCTCCTCCTCAGATCAGATCGTGAAAAAGCCCAAACCAAATCCCAAAGCGACAACAGAAAAGCTCGAGCTCGAGCTC
TTGCTTGGGTGGACGAGCGAGCAGACC-CCGATCCCAGCAGTAGCACCAGGAGGAGGAAGATGTCGTCGGTGTTCAGCGG
CGATGAGACCGCCCCCTTCTTCGGCTTTCTCGGCGCCGCCGCGGCACTCGTCTTCTCATGTACG----------------
---------------------------------------------------------------------------CCCTC
TCCCATCTCTCTCAAACTTGCCAGCCT-TTGTGTAGCTTACATATGTTTGCGGGAATAAGATTGGAGCTCTGATCCGCCC
GGATCGGCGGAGCGTTGTCCCTTCTAGCGCGCTGGTCCTTCGATTCCGTAGATTCGATTCGTTTAGCACGCGAGACGAAG
CGCGCGCTTTGGTCCTGGGTTAGTCCCTGCGATCGTTGACGAGATCTCTCCGTGACCCATCCTTGCAGGTATGGGGGCGG
CCTACGGGACGGCCAAGAGCGGCGTCGGCGTGGCGTCCATGGGAGTCATGCGCCCGGAGCTCGTCATGAAGTCCATCGTG
CCCGTTGTCATGGCTGGAGTGCTCGGTATCTACGGGCTTATCATCGCCGTCATCATCAGTACCGGGATCAACCCCAAGGC
CAAGCCCTACTACCTCTTCGACGGCTACGCCCACCTCTCGTCCGGGCTCGCCTGTGGCCTTGCCGGCCTTGCTGCTGGCA
TGGCCATCGGCATTGTTGGTGATGCTGGAGTCAGGTAAGCTCAATTTATCATCTCTTATTGTGTTATGCGCACTGATTTT
GCTGCTATGTTGGTTTGTTGATGACTAATTTGCATTGTTAATGCACATGCCTCACGCCTGTGCCTACA---TAGTAGTAG
CTAGCA--------------------------------------------------------------------------
-------------------------------------------------------------------------------G
GCGCATGTGCTGCATTTGAAGGAATGCATTTAGGTGGATGGTTCTGACCCAATT--TCATTGGCCTGATTCTGTTTGAGA
TTCGAATCTCTGTAGGCTCGCTGTTCAAGTTTCATT-ATTTGGTTGTCTCAATATACTCCA--ATATAGCCTTAACAGAA
GTAAATTTCAGTTACAGCATGGATCATTCTCTACACAAATCCACTTAGGTTGTTTATGACTAGACTAACAATTCATCAAT
AAGCTGAAATCTGAGGATGAACATATACGAGCTCTTATTATTACTACACTTCTCTCTAGGCATGATATGCTTGTTGTACC
AATTATCTTAGGAAACAATCTTGACATATAGAAAAATGACACTGGCAATTTATTCCCTCACCTACGTACTATAGACGATG
AGCCTTTGTTATGTCAATTACTTCTTTCACCATGAATTTTGTGTAAGTCGGTCTA-TTATGGTGGATTTACTTTATATAT
GCTGCTCACCAGACAAAAACATTTTTCAGTGGAACCGCCTTTGTGGACTTATGAATTATGATACTCTTTGAACTGTATAC
TTTGTATTTGTTCTGGTCTTTGTAGTTTATTAGTTAGTGTGATGTCCTATATGTTTAGTTAGTAGTATGATTCTCTCTGC
TTGTTAAGTTTTGGCAATATGTATGCATACTGCTATCTGTAAATGAAACTCCCAAACTTGTAACTAAGCTACGCTGATTC
TAATAACTTGTTAAGGGTTTAGTATTTGTCAATGTTA-T-AGTTAGCTCTTTCCTTTCTACTGGTTTGTTGCTCCCTGGG
TAAGAC-CTGATAATTGCTAAGTACTCCCTCCGTCCCCAAATACTTGTCGGAGAAATGGATGAAAATGAGTGTATCTAGG
ACTAAATTGCGTCTAGATACATCCATTCATCCGACAAGTATTTTCGGACGGAGGGAGTACAAGATTATGCAATTTAAATC
TGTTACCTTCTATATACTGTTGATTTGACATGCGTGCCTTACCATCGGAGGATCAATTGGAACTTGCCTAAATTGTACCC
CGTTCTGATCAAACATCATTGTCTGCAGGGCAAATGCTCAGCAGCCCAAGCTGTTTGTCGGCATGATCCTCATCCTCATC
TTCGCAGAGGCGCTCGCTCTCTACGGTCTCATTGTCGGCATCATCCTGTCATCCCGAGCTGGCCAGTCTCGTGCCG----
----ATTAGGCATGTTCCACACACGCGGCCCTGTGTGCCCTCTTGTTTTATATTATTCAGACAGCAAACTGAGCTCTAGA
GGTTATCATGTCTAGTTTTCATTCTTCTGTTTGGTGGAGAAAAAAACATCTGTAGCCAGGGGAGCTTTGCCCTTGATGTA
CCATTCTTTTTCCGTCAGGATGCTGGGTGGGGGTTGATGCTTATTTGTGCACAGTTATTTACCTTTTGGGTCTGGCTGGA
CGGTGTAATCTGGTGAATAAGCGAGAACTTGCAATGCAATTGAGTTTTGTCCATTCATCCCACAATATCCTTTCTTGTGT
ATTATCCTTTTCGCAAAGGAGAAGTACACATGGTTTGAAACTAGAACACCAGAACGGCCCCCTTTGGTTCAAAAG-----
------------TGATTTGTAGGATTAAATTCTATAGGATTTTTT-AATGATTTGTTTTTGTACTATCCTACCGAGGAAC
CATCCAAAATTCTATTGTTTCTCTATTGATGCCACCAAAGTTCCTTACAAATTTAAAATCCTTTGAATTCCTTTGATTCA
TAGGGTAGTAATATCATAGGGATAGGAAACTTGTAAACATAAGATGCCATGCATCTCAAATCCTATGAATAGAAAATGAT
ATGTCCTTGCTAATGTTTATTTTTCTATGAAATATGGAGATAGAGAATTCCTTAATGAGAATTTGATTTGTATTCCTAC-
-------GAACAGTAAACAAAATTTTTCTATAGAAATTCTATCCTACAAAATTCCTCCAAAT-CAAAGGAGGTCTGAATC
CTTCGCCGCTGCGATGTACTAGACGGAATGGTGTGCTCCGCTACGCTCAAATATAGTGGCGTTTGA-ACCCACGTGGATC
TTTGGCGTTTGATACCCACGCGGATCTTTGGGTGCCAATGCACCTGAACTGTAAAATAATTTAGAAAGTTTTAGAAGTCA
AAAATTCTGAATTATTTTGGAATCAAACATCATCAGGTGTTACGCTCGTGTGAAAAGTTTCAAGAATTACTTTTCACACA
AGTGTATGTTCATGTTTGATTCTTGAGAATTACTTTTCACACATGTAATACCTGATCATGT-------------------
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>chr5A_743
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------------------------------CTGGAACAACATCAACCACGCAACGCTCCTTCCACGTGGCCCACGAGCAG
CGAGACACCAATTCTACAATCTACACCCAGGCAAGGGCACCGGTGCCCCTCCTGACCGGGCAACCACGGGGTACACGGCT
CCTACATCCAGAGGGGCAAAACCGTCCAGTAAAAAACATTCCGCCCCACCCCGTACGTCTTCTTCTTCCCCAATCTCCAA
CGCCCTCCTCCTCAGATCAGATCGTGG--AAGCCCAGGCCAAATC-CAAAGCGACAACAGAAAAGCTCG------AGCTC
TTGCTTGGGTGGTCGAGCGAGCAGACC-CCGATCCCAGCAGTAGCACCAGGAGGAGGAAGATGTCGTCGGTGTTCAGCGG
CGATGAGACCGCCCCCTTCTTCGGCTTTCTCGGCGCCGCCGCGGCTCTCGTCTTCTCATGTACG----------------
---------------------------------------------------------------------------CCCTC
TCCCATCTCTCTCAAACTTGCCAGCCTCTTGTGTAGCTTACATATGTTTGGGGGAATACGGTTGGAGCTCTGATCCGCCC
GGATCGGCGGAGCGTTGTCCCTTCTAGCGCGCTGGTCCTTCGATTCCGTAGATTCGATTCGTTTAGCAGCCGAGACGAAG
CGCGCGCTTTGGTC-TGGGTTTGTCCCTGCGATCGTTGACGAGATCTTTCCGTGTCCCATGCTTGCAGGTATGGGGGCGG
CCTACGGGACGGCCAAGAGCGGCGTCGGCGTGGCGTCCATGGGAGTCATGCGCCCGGAGCTCGTCATGAAGTCCATCGTG
CCCGTTGTCATGGCTGGAGTGCTCGGTATCTACGGGCTTATTATCGCTGTCATCATCAGTACCGGGATCAACCCCAAGGC
CAAGCCCTACTACCTCTTCGACGGCTACGCCCACCTCTCGTCCGGGCTCGCCTGTGGCCTTGCCGGACTTGCTGCTGGCA
TGGCCATCGGCATTGTTGGTGATGCTGGAGTCAGGTAAGCTCAATTTATCATCTCTTACTGTGTTATGCGCACTGATTTT
GCTGGTATGTTGGTTTGTTTATGACTAATTTGCATTGTTAATGCACATGCCTCACGCCTGTGCCTACA---TAGTACTCC
CTCCGTTCCTAAATACAAGTCTTTGTTGAGATTCCACTATAGACTACATACGTATGTATGTAGATGCATTTTAGAGTATG
ATTCACTCATTTTGCTCCGTATGTAGTCCATAGTGAAATCTCTCCAAAGACTTATATTTAGGAACGGAGGGAGTAGTAGG
GCGCACGTGTTGCCTTTGAAGGGATGCATTTAGGTGGATGGTTCTGACCCAATATGTCATAGGCCGGATTCTGTTTGAGA
TTCGAATCTCTGTAGGCTCGCTGTTCAAGTTTCATTTATTTAGTTGTCTC-GTATACTCCAATATATAGCCTTAACAGAA
GTAAATTTCAGTTACAGCATGGATCATTCTCTACACAAATCCACTTAGGTTGTTTATGACTAGACTAACAATTCATCAAT
AAGCTGAAATCTGAGGATGAACATATACGAGCTCTTATTAGTACTACAC-----TCTAGGCATGATATGCTTGTTGTACC
AATTATCTTAGGAAACAATCTTGAGTTTTAGAAAAATGACGCTGGCTATTTCTTCCCTCACCTACGTACTATAGATGATG
AGCCTTTGTTATGTCAATTACTTCTTTCACCATGAATTTTGTGTAGGTCGGTCTATTATTGGTGGATTTACTTTATATAT
GCTGCTCACCAGGCAAAAACATTTTTCAGTGGAACCGCCTTTGTGGATTTATGA-------TACTCTCTGAACTGTATAC
TTTGTATTTGTTCTGGTCTTTGTAGTTTA----TTAGTGTGATGTCCTATATGTTTAGTTACTAGTATGATTCTCTCTGC
TTGTTAAGTTTTGGCAATATGTATGTGTACTGCTATCTGTAAATGAAACTCCCAAACTTGGAACTAAGCTACGCTGATTC
TAATTCCTTGTTAAGGGTTTAGTATTTGTCAATGTTA-TTAGTTAGCTCTTCCCTTTCTACAGGTTTGTTGCTCCCTGGG
TAAGAC-CTGATAATTGCTAAGTACA------------------------------------------------------
------------------------------------------------------------AAGATTATGTAATTTAATTC
TTTTTCCTTGTATATACTGTTGATTTGACATGCGTGCCTTACCATCGGAGGGTCAATTGGAACTTGCCTAAATTGTACCC
CGTTCTGATCAAACGTCATTGTCTGCAGGGCAAATGCTCAGCAGCCCAAGCTGTTTGTCGGCATGATCCTCATCCTCATC
TTCGCAGAGGCGCTCGCTCTCTACGGTCTCATTGTCGGCATCATCCTGTCATCCCGAGCTGGCCAGTCTCGTGCCGATTA
GCCAATTAGGCATGTTCCACACACGCGGCCCTGTGTGCCCTCTTGTTTTATATTATTCAGACAGCAAACTGAGCTCTAGA
GGTTATCATGTCTAGTTTTCATTCTTCTGTTTGGTGGAGAAAAAAACATCTGTAGCCAAGGGAGTTTTGCCCTTGATGTA
CCATTCTTTTCCCGTCAAGATGCTGGGAGGGGGTTGGTGCTTATGTATGCACAGTTATTTACCTTTTGGGTCTGGCTGGA
CGGTGTAATCTGGTGAATAAGCGAGAACTTGCAATGCAATTGAGTTTTGTCCATTCATCCCCCAATATCCTTTCTTGTG-
----------TCGCAAAGGAGAAGTACACATGGTTTGAAACTA-------------------------------------
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>chr4B_1064
AGAAGGA-------------------------------------------------------------------------
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-----------------------------------------------------GAGCAAGATGTCGTCGGTGTTCAGCGG
CGATGAGACGGCGCCCTTCTTCGGCTTCCTCGGCGCCGCCGCCGCCCTCGTCTTCTCATGTACGATCGCCTCTCCTCCCT
CCTCCTCCCCCTCCTCCCGCGATCGAGCGGCACCTCTTACGAAAAGCTGAGATTTCATCAGATGCCCGAGGGGTTCCCTC
TCCCCGCTCCCGTCGGGCTCGCGGTCGCGCCTTGGCTCGATCTGCCG---------------------------------
----------------GTCCCCGTGGTTGCACTGCGAGTTCCGTGCCC---------------------------CGATT
CGCTCGATTTGGGATCCCTCCACGCTGGATCCGGCTAGAGACACGATTTGACCGGTTTCGT-TTGCAGGCATGGGGGCGG
CCTACGGGACGGCCAAGAGCGGCGTCGGGGTGGCGTCCATGGGAGTCATGCGGCCGGAGCTTGTCATGAAGTCCATCGTG
CCCGTCGTCATGGCGGGAGTGCTCGGAATCTACGGCCTCATCATCGCCGTCATCATCAGCACCGGGATCAACCCCAAGGC
CAAGCCCTACTTCCTCTTCGACGGCTACGCTCACCTCTCCTCCGGGCTCGCCTGTGGCCTCGCGGGGCTCGCCGCCGGCA
TGGCCATTGGCATTGTCGGTGATGCTGGAGTCAGGTAA------------------------------------------
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>chr4A_1067
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---------------------------------------------------AGGAGCAAGATGTCGTCGGTGTTCAGCGG
CGATGAGACGGCGCCCTTCTTCGGCTTCCTCGGCGCCGCCGCCGCGCTCGTCTTCTCATGTACGATCGCCTCTCCTCCCT
CCCTCCT---------CCTTGATCGAGCGACACGCTAGGAA-------GAAAACTAGTTAGATGTCAGAGGGTT--CCTC
TCCCCTCTCCGGTCGGGCTCGCGGTCGCGCCTTCGCTCGATCTGCCG---------------------------------
----------------GTCCCCGCGGCCGCGCTGCGAGTTCCGTGCCC---------------------------CGATT
CGCTCGATTTGGGATCCCTCCACGCTGGATCCGGCTAGAGGGA-GATTTGACCGGTTTCGT-TTGCAGGCATGGGGGCGG
CCTACGGGACGGCCAAGAGCGGGGTCGGGGTGGCGTCCATGGGGGTCATGCGGCCAGAGCTCGTCATGAAGTCCATCGTG
CCCGTCGTCATGGCGGGTGTGCTCGGAATCTACGGCCTCATCATCGCCGTCATCATCAGCACCGGGATCAACCCCAAGGC
CAAGCCCTACTTCCTCTTCGACGGCTACGCTCACCTCTCCTCCGGGCTCGCCTGTGGCCTCGCGGGGCTCGCCGCCGGCA
TGGCCATTGGCATTGTCGGTGATGCTGGAGTCAGGTAA------------------------------------------
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>chr4D_1069
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-----------------------------------------------------GAGCAAGATGTCGTCGGTGTTCAGCGG
CGATGAGACGGCGCCCTTCTTCGGCTTCCTCGGCGCCGCCGCCGCCCTCGTCTTCTCATGTACGATCGCCTCTCCTCCCT
CCTCC---CCCTCCTCCCGCGATCAAGCGGCACCTTTTACGAAAAGCTGAGATTTCATTAGATGTCCGAGGGGTTCTCTC
TCCCCGCTACCGTCGGGCTCGCGGTCGCGCCTTCGCTCGATCTGCCG---------------------------------
----------------GTCCCCGCGGCCGCGCTGCGAGTTCCGTGCCC---------------------------CGATT
CGCTCGATTTGGGATCCCTCCACGCTGGATCCGGCTAGAGAGACGATTTGACCGGTTTCGT-TTGCAGGCATGGGGGCGG
CCTACGGGACGGCCAAGAGCGGCGTCGGGGTGGCGTCCATGGGAGTCATGCGGCCGGAGCTCGTCATGAAGTCCATCGTG
CCCGTCGTCATGGCGGGAGTGCTCGGAATCTACGGCCTCATCATCGCCGTCATCATCAGCACCGGGATCAACCCCAAGGC
CAAGCCCTACTTCCTCTTCGACGGCTACGCTCACCTCTCATCAGGGCTCGCCTGTGGCCTCGCGGGGCTCGCCGCCGGCA
TGGCCATTGGCATTGTCGGTGATGCTGGAGTCAGGTAA------------------------------------------
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>SNPs
-SSSS--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSS---S-S-------------S---------------------S----------------------------
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----------------------S--------------------------------------------------------S
--------S----------------------------------------------------------S------------
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-------------------------S-S------S-----------S---------------------------------
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-S--------S---------------------------------------------S-----------------------
-----------------------------S--SS---S-----------------------------S-S----------
----------------------------------------------------------S----------------S----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------S-----------------S----------------
-------------------------------------------------------------------S------------
------------------------------------------------S-------------------SSS--S------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------S---------------------------------------
--S----------------------------------------------------------S------------------
------------------------S-----------------S-----S-------------------------------
--------------------------S-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------S
----------------------------S-SS-------------S------------------------------S---
---------S------------S--------------S-----------------------------------S------
------S-------------S-----------------------------------------------------------
-------------------------------------------------------------S------------------
-----------------------S----S--------S------------------------------S-----------
----------------------S-----------------S---------------------------------------
--------------------------------------------------------------------------S-----
-------------------S------------------------------------------------------------
--------------------------------------------------------S-----------------------
----------------S---------------------------------------------------------------
------------------------------------------------------------S-----SSS-----------
-----------S-----------S-S----------------------------S--SS----------------SSSSS
SSSSSSSSSSSS---------------------------------S--------------S-------------------
--SS----SS---SSSSSSSS-SS--------------------------------------------------------
--S-----------------S----------------SS------S---------S------------------------
--------S--------------------S---S-------------------S--S-----S----------------S
SSSSSSS-----------S------------------------------------------SS-----------------
--------S---------------------------------SS----------------------S------S------
------------------------------------S------------------------------S-----SS---S-
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-------------------------------------------------------------SSSSSSSSSSSSSSSSSSS
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_160
--------------------------------------------------------------------------------
------------------------------------------------------------CCGGCTTCGTCTTCCCTATC
--------------------------------------------------------------------------------
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>reverse_1499
--------------------------------------------------------------------------------
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----------------------------------------------------------TGTCTTGCAGGTATGGGAGC--
--------------------------------------------------------------------------------
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------------------------------------------------------------------
>forward_254
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------GCTCTT
TTTGCCCTCCTTGC------------------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_1914
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-------------------------------------------------------------------------CTAGTAG
CTAGCAGGCGCAT-------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------
>forward_429
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------GAGTCCGAGTCGTCGTCTTC---------------------------------------------------
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>reverse_2163
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--TGAATCTCTGTAGGCTCGCTG---------------------------------------------------------
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------------------------------------------------------------------
>forward_528
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----------------------------TCGTCGCTCGAGCTTTCTAC--------------------------------
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>reverse_2749
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----------------------------GCAACTATCTGTAAATGGAACTCCC---------------------------
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------------------------------------------------------------------
>forward_586
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------TGATGAAGAGCGTGTCGGAC------------------------------------------------------
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>reverse_2751
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------------------------------AACTATCTGTAAATGGAACTCCCA--------------------------
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------------------------------------------------------------------
>forward_587
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-------GATGAAGAGCGTGTCGGACT-----------------------------------------------------
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>reverse_2752
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-------------------------------ACTATCTGTAAATGGAACTCCCAA-------------------------
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------------------------------------------------------------------
>forward_596
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----------------CGTGTCGGACTCCATCAACT--------------------------------------------
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>reverse_2874
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------TCCTGGG
TAAGACTCTGATAATTGC--------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------
>forward_614
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----------------------------------CTTGAAGTGGAGGACGTGCA--------------------------
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>reverse_2887
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------TCTGATAATTGCTACGTACACGA---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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------------------------------------------------------------------
>forward_637
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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---------------------------------------------------------CCCCAAGATAATGAGCGCGA---
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------------------------------------------------------------------
>reverse_3069
--------------------------------------------------------------------------------
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----------------------------TATGCGTGCTTTACATCGGAG-------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------
>forward_948
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------CCCACCCCGTCTTCTTCTTG------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------
>reverse_3109
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------GAAATTGTACCC
CGTTCTGATCA---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------
>forward_1910
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------CTCACGCCTGTGCCTACATA----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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------------------------------------------------------------------
>reverse_4147
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------TACCCACATGGATC
TTTGGCG-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------
