>input_sequence_37102
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--------------------------------------------------ATGAGCTTCCTCTTCGGCAAGCGGAAGACC
CCAGCTGGTTCGATCTCTCCC-----------------------------------------------------------
------------------------------------------------------------------CCTCCTCCTGGATT
TCATGATCGTACTTGTTTACCTGTGCTACCGATCCGGAGGGACCAACCAATTCAACGCCTTTTTACCTTGTCGTGGACTA
GCAATCCGCCCGCCCGTGCC--TTTTTGGTCGGCTTGATCATCAAAAAGTGAAGTTTACTATTGCGTTAATCTCG--CCC
AGGTTCTTTCATCAAACCCTAGCTCTCGCGGGAACGTCATGTGCAGATT---GTAGTACTAGTATCTTTATTGACTTGGT
TGAGCACTGCGCTACCAGGATGCAAGAGAAACCTAACCTGTGGGGG-ATCTCCTTTTC----------------------
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-----------------------------------------------------------------CTCTTTAGCTGTTAT
AATCTTGTCTAGGCTTGTGTTCAGTTTTCACCTGTTACTGTCCAATGGGATGCCGTTAACAAGCAAGCAATGCAAGGGAC
ATCAATATTGGTTTGGAGTTACTTGATTCTACTTGTTCCTGTAAATTCTCTACTTGATTTGCTGAAGAAACCAAATAACT
TGAGAAACTGGGGCCCTCTAAATTGTAATGCTACTGCTACCTATTTACTTT------GGTGTTGATTTCCCTA-------
-----------------AGACTTCGGAATATGGGGGACACAAGACAACGTTGGAGGTTTGCTCCCCTGGGTTTTA-TGGC
AGAAAGAGCTGACATCGTTCTTTTGTTTCGTTGATGGCAGAGCTGCTGCGGGAAAACAAGCGGATGCTAGATAAGTCCAT
CAGGGAGATCGAGAGGGAGAGGCAGGGCCTGCAGACTCAGGAGAAGAAGCTCATCGCTGAGATCAAGAAGGTGGCCAAGC
AAGGACAGATGGTATGCGTACTGAAACTGCCAAATCTCTCGTGTTCTATTG--CTCATTTATAATCGACCTCCATAAAAC
TATGAAGATTAACTTGCAATCTGCATCTGTGGTAGCATAAGAAATACCAACTTC-TCAGCAAAGTGACATTGCAGGGAAC
CTAGATGATACAATTATTCTTTTTTATCTTAGCACAATCTTGCAAGCATTGAAGATCATACGAACACCAATCATTCTTC-
--------------------------CACTGTAATTCATTCTTTGTTGGTAAGTTAATTGAAATATGGTGTGTCATTATC
CTCGGCCTTGATTGTTCCATGATACAATAGGAAATGGTGTCTTCATGCACACAGC-ATTAATTCAGTCATGTTGATTTAT
CTATTTCAGACACAAAGTCTTACGTTGATGTCTCCTGAATAGGATAAGCCAATTTTGTGTTGGGAATCTTAAATTTGTAG
GTCATAGGATGTGTGTCTGCCACGTAAGTTTTTTTCTATGTTAAATTGTTCATATTTTAGGCAATAGGCTTTGCAAGTTG
ACGGAACGTGTTTTGATTTGATGGACGTTGTTCTCAGGGAGCTGTAAAAGTTATGGCAAAGGACCTTATTCGCACAAGGC
ATCAGATCACGAAATTTTATGCCCTGAAGTCCCAGTTGCAAGGTGTATCTCTCCGTATCCAGGTAGCATTGTAATCCAAG
CAGACGCTGTATATTTCATACATTTAGATATGTGCACATTCTACAATGTGATGAGGTCAAGCAACAGTAGGCTTCATTAT
ATTGTGGAAGCTCTGTTTTTCTCA--TTGCTGAAGTTTGCGTGCTAAATTTTTATAGACCCTGAAATCTACCCAAGCAAT
GGGGGAAGCCATGAAGGGCGTCACAAAAGCCATGTCACAGATGAACAGGCAGATGAATCTACCAGCACTCCAGAAGATAA
TGCGGGACTTTGAGATGCAAAACGAGAAGATGGAAATGGTCAGCGAGGTTATGGGTGATGCCATCGACGACGCCTTGGAG
GGTGATGAGGAGGAGGAAGAAACAGAAGAGCTAGTTAGCCAGGTCCTTGACGAAATCGGCATCGACATCAACTCTGAGGT
AAGATTTATCCCTGTATTTTCGTGTTGATTCTATCAGAGAGATTGAAACACCAGGATGAGACAGTGGGATATGAGTGACA
TTGATATTTTGCTATGAACCCAGCTTGTCAAGGCCCCGGCTACCGCAGTCGCCATGCCGGTTGCAGCGGGAAAGGCGCCT
GTTCAAGCTGAAGCTGCGGGCGGGATGGACGGTGGAATAGACGATGACTTGCAGGCACGGCTTGATAACCTGAGGAAGAT
GTGA----------------------------------------------------------------------------
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>chr4D_1_TraesCS4D01G141000
GCACTGGATGGACAATAAAAGAAATATATTG-TTTTAAAAAGAAGAGAGGGACCATAATTGAAAGTGATGCCTGCAAACA
CCCTCGACATCCAAGGCTTTGAATACCGTGATAGCCGCTCGTCGCTAGCAACGAGATGTAGTAACCGTTGAAGAAACAGT
GGTTGGGAAATCACCCCAAGCAGTGTAGGTTTGCAATCATTCACTACAAATCCATAAGGGATAGAGAAACTGACATTACG
GCCAAACAAATTAATGAAAAGAAGAGGTTGAAGTCGCTGTGTCAAAAACCAATCAAGCAACTTCCCTAGTTGACACACCA
ACTATCAAGATCTAAAATGCGGATCTAGCAACACCTACCCTCATAGGTTCTTTGCCGGCGCCATATCGAATGTCGTCGAG
GTAAGGACAACCCAGAGCGATATTACCACAACACGTTATTGTTGCCACTACCTCATCAAAGCCATGAGAGAACCAAAATC
TAAGGGAAGCAACGACATACTTGAAGTAAAATTAACAAAAGGGACATGTCCTCATTCCATTGGCCGCCTATGAGGTCAGT
AGGTGGAAGAGAGAAAGCGGACCGGGAGGCGGGGCGAAGGAAACCTTAGGTGACAATTAGGGTTTGGGAAGGG---CAGT
GAAGGAGCGTGGACCGGGGAATCACCCCAAGCAGTGGAGTAAAATA-TTTTTACAGTGATCTTAGCGGTAACCTGTCTAG
CTGACCAGAGGAA--AGAATAAAGCAGGGAAGCTTCCAATCTCAAACCGCGTGGACAACGTATCAGCAACGAACCCAACC
CAATATCGGGATGCCTTGCTGACGAATCAACCAACCCACTAAAACCAATCCGCGTCAACAGCTCAACACCCATCTCCTCT
CCGCCGTATCTAATCCTCCACCATCCGACGCGCAACA---GGAAGGGGAACAGCCAGATCGATCCGTGGGACTCACAGTC
CAGCCCAATCCAGGCAGCCGGCCGGCCGGATCCGACCTCCGCCCGCCGCCATGAGCTTCCTCTTCGGCAAGCGGAAGACC
CCAGCTGGTTCGATCTCTCCC-----------------------------------------------------------
------------------------------------------------------------------CCTCCTCCTGGATT
TCATGATCGTACTTGTTTACCTGTGCTACCGATCCGGAGGGACCAACCAATTCAACGCCTTTTTACCTTGTCGTGGACTA
GCAATCCGCCCGCCCGTGCC--TTTTTGGTCGGCTTGATCATCAAAAAGTGAAGTTTACTATTGCGTTAATCTCG--CCC
AGGTTCTTTCATCAAACCCTAGCTCTCGCGGGAACGTCATGTGCAGATT---GTAGTACTAGTATCTTTATTGACTTGGT
TGAGCACTGCGCTACCAGGATGCAAGAGAAACCTAACCTGTGGGGG-ATCTCCTTTTC----------------------
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-----------------------------------------------------------------CTCTTTAGCTGTTAT
AATCTTGTCTAGGCTTGTGTTCAGTTTTCACCTGTTACTGTCCAATGGGATGCCGTTAACAAGCAAGCAATGCAAGGGAC
ATCAATATTGGTTTGGAGTTACTTGATTCTACTTGTTCCTGTAAATTCTCTACTTGATTTGCTGAAGAAACCAAATAACT
TGAGAAACTGGGGCCCTCTAAATTGTAATGCTACTGCTACCTATTTACTTT------GGTGTTGATTTCCCTA-------
-----------------AGACTTCGGAATATGGGGGACACAAGACAACGTTGGAGGTTTGCTCCCCTGGGTTTTA-TGGC
AGAAAGAGCTGACATCGTTCTTTTGTTTCGTTGATGGCAGAGCTGCTGCGGGAAAACAAGCGGATGCTAGATAAGTCCAT
CAGGGAGATCGAGAGGGAGAGGCAGGGCCTGCAGACTCAGGAGAAGAAGCTCATCGCTGAGATCAAGAAGGTGGCCAAGC
AAGGACAGATGGTATGCGTACTGAAACTGCCAAATCTCTCGTGTTCTATTG--CTCATTTATAATCGACCTCCATAAAAC
TATGAAGATTAACTTGCAATCTGCATCTGTGGTAGCATAAGAAATACCAACTTC-TCAGCAAAGTGACATTGCAGGGAAC
CTAGATGATACAATTATTCTTTTTTATCTTAGCACAATCTTGCAAGCATTGAAGATCATACGAACACCAATCATTCTTC-
--------------------------CACTGTAATTCATTCTTTGTTGGTAAGTTAATTGAAATATGGTGTGTCATTATC
CTCGGCCTTGATTGTTCCATGATACAATAGGAAATGGTGTCTTCATGCACACAGC-ATTAATTCAGTCATGTTGATTTAT
CTATTTCAGACACAAAGTCTTACGTTGATGTCTCCTGAATAGGATAAGCCAATTTTGTGTTGGGAATCTTAAATTTGTAG
GTCATAGGATGTGTGTCTGCCACGTAAGTTTTTTTCTATGTTAAATTGTTCATATTTTAGGCAATAGGCTTTGCAAGTTG
ACGGAACGTGTTTTGATTTGATGGACGTTGTTCTCAGGGAGCTGTAAAAGTTATGGCAAAGGACCTTATTCGCACAAGGC
ATCAGATCACGAAATTTTATGCCCTGAAGTCCCAGTTGCAAGGTGTATCTCTCCGTATCCAGGTAGCATTGTAATCCAAG
CAGACGCTGTATATTTCATACATTTAGATATGTGCACATTCTACAATGTGATGAGGTCAAGCAACAGTAGGCTTCATTAT
ATTGTGGAAGCTCTGTTTTTCTCA--TTGCTGAAGTTTGCGTGCTAAATTTTTATAGACCCTGAAATCTACCCAAGCAAT
GGGGGAAGCCATGAAGGGCGTCACAAAAGCCATGTCACAGATGAACAGGCAGATGAATCTACCAGCACTCCAGAAGATAA
TGCGGGACTTTGAGATGCAAAACGAGAAGATGGAAATGGTCAGCGAGGTTATGGGTGATGCCATCGACGACGCCTTGGAG
GGTGATGAGGAGGAGGAAGAAACAGAAGAGCTAGTTAGCCAGGTCCTTGACGAAATCGGCATCGACATCAACTCTGAGGT
AAGATTTATCCCTGTATTTTCGTGTTGATTCTATCAGAGAGATTGAAACACCAGGATGAGACAGTGGGATATGAGTGACA
TTGATATTTTGCTATGAACCCAGCTTGTCAAGGCCCCGGCTACCGCAGTCGCCATGCCGGTTGCAGCGGGAAAGGCGCCT
GTTCAAGCTGAAGCTGCGGGCGGGATGGACGGTGGAATAGACGATGACTTGCAGGCACGGCTTGATAACCTGAGGAAGAT
GTGAACAT-------TGACGGATTGTCCACGCCCGCGCAATTCTCTGTCTGTAGTTTCGTACC--ATAAATGCCACTCCG
GCAAATCTCTTGACGTATCATTTGCAGTGTGTTTGGCATTGATCATCTGTATATAGACAGATCATCATA-TTTCAATAAA
TCACATACTCCCTCCGTCCTAAAATTCTTGTCTTAGATTTGTCTAGATACGGATGTATCTAATACTAAAATGTGATTTGA
TATATCCGTATTTAGACAAATCTAAGACAAGAATTTTAGGACGGAGGGAGTACTAGGCTTGGTCTTTCTAGTTCCATTTG
CCGCACTCTCGTCATGATTCTTATTT---AGATGAAATAGCAGTAAAGTAGTGACCTAAACGTTGGATAATGCATTGCAG
CTCTC-GGTGCCACACACCCCTATATGAAAAGGTAAGCGTTACACATCACCCGACGGATAATCACGTTTGCGTCCGCCCC
CTCGGTTGCTTGCCACGCGTCCCCTGTAGACCGCACCAGCACATTCTTTGCAACAGCCATGACTCGTACCTTATCCTCAT
CTCCTCAATCTCCCTCCTGAATCAGCGGTGCCAAGCGAGATGGTCA-------TCTGCACCATGAGTGTGCCCTTGCTCG
CCACCGCCACGTGCTGGCAGCCATCCTCACCAGCTAGGCAGGCCTTTGCCGTCGTCACCAGTTGCCGCGGCGGTGCGCCA
TTGCAGCTAGGCCTCGCACCG-TCGCCGCCGTTATCACCC--GCTTCCACCATGACGGTCGGCCGCGTGCGGTGCGCCAC
CTCGCCGGCAAGGTGAGCTTGTCGTCGCTCCTCCCTCGCCACCATTCGACGGAAGCAACATGGTAGTTGTTTCTGCAATG
CAACCGTTGTTTCAGGAATTGTTTCTGCAACGTGGCCGT-TGTTTCAGGAATTGTTTCTGCAATCTCCAAATTTTTGCAA
CATGGTAGTTGTTTCTACAACACAGCCGTTGTTTCAGGAATTGCTTCTGCAACGCGGCCGTTGTTTCAG
>chr4B_11
----------GACAATAAGAGGAATATATTGCTTTTAAAAAGAAGTGAGGGGCCGCAATAGAAAGTGATACCTGCAAACA
CCCTTGACATCCAAGGCTTTGAATACTGCAACAACTACTCGCCGCTAGCAACGAGATGTAGTAACCGTTGAAGGAAT--T
GGCCGGGGAGTCGCCCCAAGTAGTGTAAACTTGCAATCCAT---------------AGGGGTAGAGAAACTGACCTTACC
ACCGAACAAATTAATAAAAAGAAGAGGTTGAAGTCGTCGTGTCAAAAACCAACCAAGTGACTTCCCGAGTTGACACACCA
ATTTTTAAGATCTGAAGTGCAGATCTAACAACACTTATCCTTACATGTTCTTTTCCGACACCATATCAAATATCGTCGAG
GTCAGGAGACACCGAAGCAACTTATT-ACAACACGTTATTGTTGTCACTACCTCAGCAATGCCATGAGAGAACCAAAATC
TAA--------------------------------CAAAAGGAACGTGCCCTCACTCTATTGGCCGCCTATGAGGTCAGT
GA-TGGAAGAGAGGAAGGTGATCGAGAGGGGGCGCGAAGGAAACTTTAGGTGTCAATTAGGGTTTGGGATGGAAGACATT
GAAGGAACATTGACTGGGGAATCACCCCAAGCAGCGGAGTAACTATTTTTTTACAGTAATCTCAGCGGTAACCTGTCTAG
CTGACTAGAGGAAGGAGAATAAAGCAGGGAAGCGTCCAATCTCAAACCGCGTGGACACGGTATCAGCAACGAACCCAACC
CAATATCGGGATGCCTTGCTGACGAATCAACTAACCCACCAAAACCAATCCGCGTCAACAGCTCAACACCCATCTCATCT
CCGCCGTATCTAGTCCTCCACCATCCGACGCGCAAGA---GGGAGGGGAACAGCCAGATCGATCCGTGGGACTCACAGTT
TAGCCCAATCCAAGCAGCCGGCCAGCCAGATCTGACCTCCGCCCGCCGCCATGAGCTTCCTCTTCGGCAAGCGGAAGACC
CCAGCTGGTTCGTATCTCT-------------------------------------------------------------
------------------------------------------------------------------CCTCCTCCTGGATT
TTGTGATCCTACTTGTTTTCCTGTGCTACCAATCCGGAGGGACCAACAAATTCCACGCCCTTTTACCTTGTTGTGGACAA
GTAATCCGCCCGCCCGTGCCCCTTTTTTGTCGGCTTGATCATCCAAAATTGAAGTTTACTATGACGTTAATCTCTCTCTC
GGGTTCTTCCATCAAACCCTAGCTCTCGCGGGAACCTCGTCTGCAGATTGTAGTACTACTAGTATCTTTGTTGACTTGGT
TGGGTACTGCGCTACCAGGATGCAAGAGAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCTTTAGCTGCTAT
AAT----------CTTGTGTTCAGTTTTCACCTGTTACTGCCCAATGGGACGCCGTTAACTACCAAGCAATGCAAAGGAC
ATGAATATTGGTTTGGAGTTACTTGATTCTACTTGTTCCTGTAAATTCTGCACTTGATTTGCTGAAGAAACCAAATAACT
TAAGAAACTGGAGCCCTGTAAATTGTAATGCTACTGCTACCCATTCAATTCTAGACCGGAGTTGATTTCCCATGTACACC
GGATCCCTGTAAATTGTAGACTTCGGCATATGGGGGACACAACACAATGATGGAGGTTAGCTCTCCCGGGTTTTTTTGGC
AGAAAGAGTTCTCATCATTCTTTTGTTTGGTTGATGATAGAGCTGCTGCGGGAGAACAAGCGGATGCTAGATAAGTCTAT
TAGGGAGATCGAAAGGGAGAGGCAGGGCCTCCAGACTCAGGAGAAGAAGCTCATCGCTGAGATCAAGAAGGTAGCCAAGC
AAGGACAGATGGTATGTGCACTGAAATTGCCAAATCTCTCTTGTCGTCTATTACTCATTTATAATCGACCTCCATAAAAC
TATGAAGATTAACTTGCAATCTGCATCTGTGGTAGCATAAGAAATACCAACTTTGTCAGCAAAGTGACGTTGCAGGGTAC
CTAGATGATACGATTATTCTTTTTTATCTCAGCACAATCTTGCAAGCATT-AAGATCATAAGAACAGCAACCATTCTTCC
CTGCTACTGCCATAGTTTTAAGCTGTCACTGCCAT----------------AGTTAATTGAAATATGGCGTGCTATTATC
CTCGCACTTGATTGTTCCATGATACAATAGGAAATGGTGTCTTCATGCACATATGAATTAATTCAGTCATGTTGATTTAT
CTATTCCAGTCACAAAGTTTTATGTTGATGTCTCCTGAATAGGGTAAGCCAATTTTGTGTTTGGAATCTTAAATTTGTAG
GTCATAGGGTGTGTGTCTGCCACTTAAGTTTTTTCTGCGTGCAAGTGC-TCATATTTTAGGCAATAGGCTTTGCAAGTTA
ATGGAACGTGCTTTGATTTTATGGACGTTGTTCTCAGGGAGCTGTGAAAGTTATGGCAAAGGACCTTATTCGCACAAGGC
ATCAGATCACGAAATTTTATGCCCTGAAGTCCCAGTTGCAAGGTGTATCTCTTCGTATTCAGGTAGCATTGTAATCCAAG
CAGATGTTGTATATTTCATACATTTAGATATGTGCACATTCTGCAATGTGATGAGGTC----------AGGCTTCATTAT
ATTGTGGAAGCTCTGTTTTTTCTCATTTGCTTAAGTTTGCGTGCTAAAATTTTATAGACCCTGAAATCAACACAAGCAAT
GGGGGAAGCCATGAAGGGCGTCACAAAAGCCATGTCACAGATGAACAGGCAGATGAATCTACCGGCACTGCAGAAGATAA
TGCGGGACTTTGAGATGCAAAATGAGAAGATGGAAATGGTCAGCGAGGTTATGGGTGATGCCATCGACGACGCCTTGGAG
GGTGATGAGGAGGAGGAAGAAACAGAAGAGCTAGTTAGCCAGGTCCTCGACGAAATCGGCATCGACATCAACTCTGAGGT
AAGATTTATCCCTGTATTTTCGTGTTGATTCTATCATAGAGATTGAAACACCAGGATGAGACAGTGGGATATGAGTAACG
TTGATATTTTGCTCTGAACCCAGCTTGTCAAGGCTCCGGCTACCGCAGTCGCCATGCCGGTTGCAGCGGGAAAGGCGCCT
GTTCAAGCTGAAGCTGCGGGCGGGATGGACGGTGGAATAGACGATGACTTGCAGGCACGGCTTGATAACCTGAGGAAGAT
GTGAGCAT-------TGACGGATTGTCCACGCCCGCGCAATTC----TCTGTAGTTTTGTACCATATAAATGCCACTCCG
GCAAATCTATTGACATATCATTTGCAGTGTGTTTGGCATTGACCATCTGTATATAGACAGATCATCATATTTTCAATAAG
TCACATACT-----------------------------------------------------------------------
------------------------------------------------------AGGCTTGGTCTTTCTAGTTCCATTTG
CCGCACTCTCGTCAGGATTCTGAACATCGAGATGAAATAGCAGTAAAGTAGTGACCTAAACGCTGGAAAATGCATTGCAG
CTCTCGGGTGCCACCCACCCCTATATGAAAA-------------------------------------------------
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>chr4A_616
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--------------------------------------------------------TTAGGGTTTGGGATGGAAGACATT
GAAGGAACATTGACGGGGGAATCA-CCCAAGCAGTGGAGTAATTAT-TTTTTACAGTAATCTCAGCGGTAACCTGTCTAG
CTGACTAGAGGAA--AGAATAAAGCAGGGAAGCTTCCAATCTCAAACCGCGTGGACACGGTATCAGCAACGAACCCAACC
CAATATCGGGATGCCTTGCTGACGAATCAACTAACCCACCAAAACCAATCCGCGTCAACAGCTCAACACTCATCTCCTCT
GCGCCGTATCTAATCCTCCACCATCCGACGCGCAAGAAGAGGGAGGGGAACATCCAGATCGATCCGTGGGACTCACAGTC
CAGCCCAATCCAAGCAGCCGGCCGGCCGGATCCGACCTCCGCCCGCCGCCATGAGCTTCCTCTTCNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTCCTCCTGGATT
TCGTGATCCTACTTGTTTTCCTGTGCTACCAATCCGGAGGGACCAGCAAATTCCACGCCCTTTTACCTTGTTGTGGACAA
GCAATCGGCCCGCCTGTGCC------------------TCATCCAAAATAGAAGTTTGCTATGGCGTTAATCTCG--CTC
GGGTGCTTCCACCAAACCCTAGCTCTGGCGGGAACCTCATGTGCAAATT---GTAGTACTAGTATCTTTATTGACTTGGT
TGAGTACTGCGCTACCAGGATGCAAGAGAAACCTAACCTGTGGGGGAATCTTCTTCTC----------------------
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-----------------------------------------------------------------CTCTTTAGCTGTTAT
AATCTTGTCTAGGTTTGTGTTCAGTTTTCACCTGTTACTGTCCAATGGGACGCCGTTAACAAGCAAGCAATGCAAGGGAC
ATGAATATTGGTTTGGAGTTACTTGATTACACTTGTTCCTGTAAATTCTCTACTTGATTTGCTGAAGAAACCAAATAACT
TAAGAAACTGGGCCCCTCTAAATTGTAATGCTACTGCTACCTATTTACTTT------GGTGTTGATTTCCCCA-------
-----------------AGACTTCGGAATATGGGGGACACAAGACAACGTTGGAGGTTAGCTCCCCTGGGTTTTA-TGCC
AGAAAGAGCTGACATTGTTCTTTTGTTTCGTTGATGGCAGAGCTGCTGCGGGAGAACAAACGTATGCTAGATAAGTCCAT
CAGGGAGATCGAGAGGGAGAGGCAGGGCCTGCAGACTCAGGAGAAGAAGCTCATCGCTGAGATCAAGAAGGTGGCCAAGC
AAGGACAGATGGTATGTACACTGAAACTGCAAAATCTCTCGTGTTCTATTG--CTCATTTATAACCGACCTCCATAAAAC
TATGAAGATTAACTTGCAATCTGCATCTGTGGTAGCATAAGAAATACCAACTAC-TCGGCAAAGTGGCATTGCAGGGAAC
CTAGATGATACAATTATTCTTTTTTATCTTAGCACAATCTTGCAAGCATTGAACATCATACGAACACG-------CTTCC
CTGCTACTGCCATAGTTTTAAGCTGTCACTGTAATTCATTCTTTGTTGGTAAGTTAATTGAAATATGGTGTGCCATTATC
CTCGGGCTTGATTGTTCCATGATACAATAGGAAATCGTGTCTTCATGCACACAGC-ATTAATTCAGTCATGTTGATTTAT
CTATTTCAGACACAAAGTTTTACGTTGATGTCTCCTGAATAGGATAAGCCAATTTTGTGATGGGAATCTTAAATTTGTAG
GTCATAGGATGTGTGTCTGCCACTTAAGTTTTTTTCTGTGTTAAATTGTTCATATTTTAGGCAATAGGCTTTGCAAGTTA
ACAGAACGTGTTTTGATTTGATGGACATTGTTCTCAGGGAGCTGTAAAAGTTATGGCCAAGGACCTTATTCGCACAAGGC
ATCAGATCACGAAATTTTATGCCCTGAAGTCCCAGTTGCAAGGTGTATCTCTTCGTATTCAGGTAGCGTTGTAATCCAAG
CAGACGCTGTATATTTCATACATTTAGATATGTGCACATTCTACAATGTGATGAGGTCAAGCGACAGTAGGCTTCATTAT
ATTGTGGAAACTCTGTTTTTCTCA--TTGCTGACGTTCGCGTGCTAAATTTTTATAGACCCTGAAATCAACACAAGCAAT
GGGAGAAGCCATGAAGGGCGTCACAAAAGCCATGTCACAGATGAACAGGCAGATGAATCTACCAGCACTCCAGAAGATAA
TGCGGGACTTTGAGATGCAAAATGAGAAGATGGAAATGGTCAGCGAGGTTATGGGTGATGCCATCGACGATGCCTTGGAG
GGTGATGAGGAGGAGGAAGAAACAGAAGAGCTAGTTAGCCAGGTCCTCGATGAAATCGGCATCGACATCAACTCTGAGGT
AAGATTTATCCCTGTATTTTCGTGTTGATTCTATCATAGAGATTGAAACACAAGGATGAGACAGTGGGATACGAGTGACA
TTGATATTTTGCTCCGAACCCAGCTTGTCAAGGCCCCGGCTACCGCAGTCGCCATGCCGGTTGCAGCGGGAAAAGCGCCT
GTTCAAGCTGAAGCTGCGGGCGGGATGGACGGTGGAATAGATGATGACTTGCAGGCACGGCTTGATAACCTGAGGAAGAT
GTGAGCACTGGACTCTGACGGATTGTCCACGCCCGC--AATTCTCTGCCTGTAGTTTTGTACC--ATAAATGCCACTCCG
GCAAATCTATTGACGTATCATTTGCAGTGTGTTTGGCATTGACCATCTGTATATAGACATATCATCATATTTTCAATAAA
TCACATACT-----------------------------------------------------------------------
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>chr6A_3560
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---------------------------AAAAGGGAAACATTACTCATCACCCGGTGGATAATCACGTTTGCATCCGCCCC
CTCGGTTGCTTGCCACGCGTCCCCTGTGGACCGCACCAGCACATTCTTTGCAACAGCCATGGCTCGTACCTTATCCTCAT
CTCCTTAATCTCCTTCCTGAATCAACGGTGCCAAGCGAGATTGTCGTCTGCACTCTGCACCATGAGTGTGCCCTTGCTCG
CCACCGCCACGTGCTGGCAGCCATCCTCACCGGCTAGGTAGGCCTTTGCCGTCGTCACCGGTCGCCGTGGCGGTGCGCTG
TTGCAGCTAGGCCTCGCACCA-TCGTTGCCGTTGTCACCCC-GCTTCCACCATGACGGTCGGCCGCGTGCGGTGCACCAC
CTTGCCGGTGAGGTGAGCTTGTCGGCGCTCCTCTCTCACCACCATTCGAGGGAAGCAACATGATAGTTGTTTATACAACA
CAACCGTTGTTTCAGAAATTGGTTCTGCAACGCGGCCGT-CGTTTCAGGAATTGTTCCTCCAATCTTCAAATTTTTCCAA
CATGGTAGTTGTTTCTGCAACACAGCCGTTGTTTCAGGAATTGCTTCTCCAACACGGCCGTTGTTTCA-
>chr1D_3563
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------------------------------AGGGAAACGTTATACATCACCCGGCGGATAATCACGTTTGCGTCCGCCCC
CTCGGTTGCTTGCCACGCGTCCCCTGTGGACCGCACCAGCACATTCTTTGCAACAGCCATGGCTCGTACCTTATCCTCAT
CTCCTCAATCTCCTTCCTGAATTAGCAGTGACAAGCAAGATGGTGG-------TCTGCACCATGAGTGTGCCCTTGCTCG
CCACCGCCACATGCTAGCAGCCATCCTCACCGGCTAGGCAGGCCTTTGCCATCGTCACCGGCCGCCGTGGCGGTGCGCCG
TTGTAGCCAGGCCTCGCACCA-TCGTCGCCGTTGTCA-CCC-GCTTCCACCATGACGGTCAGCCGCGTGCGATGCGCCAC
CTCGCCGGTGAGGTGAGATTGTCGTCGCTCCTCTCTCACCACCATTCGATGGAAGCAACATGGTAGTTGTTTCTGCAACG
CAACCGTTGTTTCAGGAATTGTTTCTGCAACACGGCCGT-TGTTTCAGGAATTGTTTCTGCAATCTCCAAATTTTTGCAA
CATGGTAGTTGTTTCTGCAACGCAACAGTTGTTTCAGGAATTGGTTCTGCAACGCGGCCGTTGTTTCAG
>chr7A_3563
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------------------------------AGGGAAACGTTACACATCACCCGGCGGATAATCATATTTGCGTCCGCCCC
CTCGGTTGCTTGCCACGCGTCCCCTGTGGACCGCACCAGCACGTTCTTTGCAACAGCCATGGCTCGTATCTTATCCTCAT
CTCCTTAATCTCCTTCCTGAATCAGCGGTGCCAAGCGAGATGGTCG-------TCTGCACCATGAGTGTGCCCTTACTCG
CCACCGCCACGTGCTGGCAGCCATCCTCACCGGCTAGGCAGGCCTTTGCCGTCGTCACCGGTCGCCGCGGCGGTGCGCTG
TTGCAGCTAGGCCTCGCACCA-TCGTCGTCATTGTCA-CCCCGCTTCCACCATGACGGTCGGCCGCGTGTGGTGCGCCAC
CTTTCCGGTGAGGTGAGCTTGTCGGCGCTCCTCTCTCACCACCATTCGACGGAAGCAACATGCTAGTTGTTTCTGCAACG
CAACCGTTGTTTCAGGAATTGTTTCTGCAACGCGGCCGT-TGTTTCAGGAATTGTTCCTCCAATCTTCAAATTTTTGCAA
CATGGTAGTTGTTTCTGCAACGCAACCGTTGTTTCAGGAATTGCTTCTCCAACGGGACCGTTGTTTCAG
>chr4D_3564
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-------------------------------GGGAAACGTTACACATCACCCGACGGATAATCATGTTTGTGTCCGCCC-
------------CCACGCGTCCCCTGTGGACCGCACCAGCACATTCTTTGCAACAACCATGGCTCGTACCTTATCCTCAT
CTCCTCAATCTCCTTCCTGAATCAGCGGTGCCAAGCGAGATGGTCG-------TCTGCACCATGAGTGTGCCCTTGCTCG
CCACCGCCACGTGTTGGCAGCCATCCTTACCGGCTAGGCAGGCCTTTGCCGTCGTCACCGGTCGCCGCGGCGGTGCGCCG
TTGCAGCTAGGCCTCGCACCG-TCGTCGCCGTTGTCA-CCC-GCTTCCACCATGACGGTCGGCCGCGTGCGGTGCGCCAC
CTCGCCGGTGAGGTGAGCTTGTCGTCGCTCCTCCCTCACCACCATTCGACGGAAACAACATGGTAGTTGTTTCTGCAACG
CAACCGTTGTTTCAGGAATTGTTTCTGCAACGCGGCCGT-TGTTTCAGGAATTGTTTCTGCAATCTCCAAATTTTTGCAA
CATGGTAGTTGTTTCTGCAACGGGGCCGTTGTTTCAGGAATTGCTTCTGCAACGCGGCCGTTGTTTCAG
>chr7A_3564
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-------------------------------GGGAAACGTTACACATCACCCGGCAGACAATCACGTTTGCGTCCGCCCC
CTCGGTTGCTTGCCACGCGTCCCCTGTGGACCGCACCAGCACATTCTTTGCAACAGACATGGCTCGTACCTTATCCTCAT
CTCCTTAATCTCCTTCCTGAATCAGTGGTGCCAAGCGAGATGGTCGTCTACACTCTGCATCATGAGTGTGCCCTTGCTCG
CCACCGCCACGTGTTGGCAGCCATCCTCACCGGCTAGGCAGGCCTTTGCCGTCGTCACCGGTCGCCGCGGCGGTGCGCTG
TTGCAGCTAGGCCTCGCACCA-TCGTCGCCGTTGTCA-CCCCGCTTCCACCATGACGGTCGGCCGCGTGCGGTGCGCCAC
CTTGCCGGTGAGGTGAGCTTATCGGCGCTCCTCTCTCACCACCATTCGACGGAAGCAACATGGTAGTTGTTTCTGCAACG
CAACCGTTGTTTTAGGAATTGTTTCTGCAACGCGGTCGTTTGTTTTAGGAATTGTTCCTCCAATCTTCAAATTTTTGCAA
CATGGTAGTTGTTTCTGCAATGTAGCCGTTGTTTCAGGAATTGCTTCTCCAACGTGGCCGTTGTTTCAG
>chr1B_3579
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----------------------------------------------TCACCCGGTGGATAATCACGTTTGCGTCCGCCTC
CTCGGTTGCTTGCCACGCGTCCCGTGCGGACCACACCAACACATTATTTGCAACAGCCATGGCTCGTAACTTATCCTCAT
CTCCTCAATCTCCTTTCTGAATCAGCGGTGCCGAGCGAGATGGTCG-------TCTGCATCATGAGTATGCCCTTGCTTG
CCACCGCCACGTGCTGGCAGCCATCCTCACCGGCTAGGCAGGCCTTTGCCATCGTCACCGGTCGCCACAGCGATGTGCCG
TTGCAGCTAGGCCTCGCACCG-TCGTCGCCGTTGTCA-AAC-GCTTCCACCATGACGGTTGGTCGCATGCGGTGCGTCAC
CTCGCCGGTGAGGTGAGCTTGTCGTCGCTCCTCCCTCACCACCATTCGACGGAAACAACATGGTAGTTGTTTCTGCAACG
CAACCATTGTTTCAGGAATTGTTTCTGCAATGCGGCCAT-TGTTTCAGAAATTGTTTCTGCAATCTCCAAATTTTTGCAA
CATAGTAGTTGTTTCTACAAAGGAGCCATTGTTTCAGGAATTGCTTCTGCAATGCGGCCGTTGTTTCAG
>chr2D_3597
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----------------------------------------------------------------CGTTTGCGTCCGCCCC
CTCGGTTGCTTGCCACGCGTCCCCTGTGGACCGCACCAGCACATTCTTTGCAACAGCCATGGCTCGTACCTTATCCTCAT
CTCCTCAATCTCCTTCCTGAATCAGCGGTGCCAAGCGAGATGGTCG-------TCTGCACCATGAGTGTGCCCTTGCTCG
CCACCGCCACGTGCTGGCAGCCATCCTCACCGGCTAGGCAGGCCTTTGCCGTCATCACCAGTCGCCGCGGCGGTGCGCCG
TTGCAGCTAGGCCTCGCACCGATCGTCGCCGTTGTCA-CCC-GCTTCCACCATGACGGTCAGCCGCGTGCGGTGCGCCAC
CTCGCCGGTGAGGTGAGCTTGTCGTCGCTCCTCTCTCACCACCATTCGACGGAAGCAACATGGTAGTTGTTTCTGCAATG
CAACCGTTGTTTCAGAAATTGTTTCTGCAACGCGGCCGT-TGTTTCAGGAATTGTTTCTGCAATCTCCAATTTTTTGCAA
CATGGTAGTTGTTTCTGCAACGCAGCCGTTGTTTCAGGAATTGCTTTTGCAACGCGGCCGTTGTTTCAG
>SNPs
SSSSSSSSSS--------S--S-----------------------S-----S--SS---S---------S----------
----S---------------------S-SS-S-S-SS----S-------------------------------S--SSS-
--SS---S-S--S-------S------SSS--------SS-SSSSSSSSSSSSSSS----S-------------S----S
S--S-----------S--------------------SS--------------S----SS-------S-------------
-S-S-S-------S--S---S------S------S--S---S-S-S-------S---S-S-------S---S--------
--S----S-SS--SS---S-SS-SSSS-----------------S----------S---S--------------------
---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------S--S--S-----S--S----------------------
SSS----------S---SS--S--S----S--S-----------S-------S----------------S--S-----S-
------S-S-S---S---------------------------SSSS-----------S----S-----------------
-----S---------------------------------------------------SS---------------------
-------------------------------S-------S----------------------------------------
-----------------------------------S------S-------------------------------------
------------S-------------------------------------------------------------------
------------SSSSSSSSS-----------------------------------------------------------
--------------------------------------------------------------------------------
--S-----S---------S-----------S----------------S-----S-----S-----------S------S-
---------------------------S---------------S----S-------------S---------------S-
S-------S--------------------------S--------------------------------------------
----S----------------------------------------------S---S------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------S-----------------------------
--S-----------------------------------------------------------------------------
-S---------------------------------------------------------------------S--------
----------------------------------------------------------S---------------------
-----------------------------------------------------S--------------------------
--------------------------------------------------------------------------------
----------------S-S-------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------S---------
------------------------------------------------------------------------S-------
-----S--------------------------------------------------------------------------
------------------S-------------------------------------------------------------
-----------------------S-------------S-----------------------------------------S
--------------------------------------------------------------------------------
----------------------------------------------------S-----S---------------------
--------------------------------------------------------------S-----------------
--------------------------------------------------------------------S--S--------
--------------------------------------------------------------------------------
----------------------S---------------------------------------------------------
-----------------------------------------------S--------------------------------
------------------------------------S-------------------------------------------
-------------S------------------------------------------------------------------
--------------------------------------------------------------------------------
----S----------------------------------------------------S----------------------
--------S---------------------------------S-------------------------------------
---------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------------------
--------------S------S-SSS------------------------------------S----S------------
--------------S------------------S--S-------------------------------------------
---------------------------S---------------------------------S------------------
-------------S-------------------------------S----------------------------------
-------------------------------S------------------------------S----------------S
-------------------------S-------S----------------------------------------------
--------SS---------------------------S------------------------------------------
--------------------------------S-----------------------------------------------
---------------------------------------------------------------------
>forward_832
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------------GCCTTGCTGACGAATCAACC------------------------------------------------
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>reverse_2059
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----------------------------------------------------------TGCTCCCCTGGGTTTTATGG--
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---------------------------------------------------------------------
>forward_1254
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----------------------------------CGGAGGGACCAACCAATTCA--------------------------
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---------------------------------------------------------------------
>reverse_3454
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-------------ATGAACCCAGCTTGTCAAGG-----------------------------------------------
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---------------------------------------------------------------------
>forward_1496
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------------------------------------ACCTGTGGGGGATCTCCTTT------------------------
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---------------------------------------------------------------------
>reverse_3658
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---------------------------------------------------------CGTACCATAAATGCCACTCCG--
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---------------------------------------------------------------------
