>input_sequence_37041
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-------------------------------ATGGCTGGAGAAGCTGATGGGAAGACCTACCAGGTATCAAGGATGCCCC
CTGCTGCTCTCAACGAGCGCATCCTTTCTTCCATGTCTCAAAAGCACGTTGCTGCTCACCCATGGCATGACCTGGAGATA
GGTATTGTGCACCCTCAGTCGAACAATGTTAAGATAGTTTTGC-------------------------------------
----------------------TAAAATTTTGTACTGTGCTGCAAGTGTTTCTGTTTAATA---TCTTACTAGTTGCTAT
ATTTTCTTTGAAAGTGCAGGTCCAGGGGCCCCTGCAGTTTTCAACTGTGTAAGTTTA-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------TCTTTTAAATAGTTTAGCTTTAAATATAGTCGATGTTCTGATCAACTTGATCGATATCAAATTA
GAGCTT--CCTTCATGCTTGCATTTAGTTTCAAATTTCGCCATAGGGACTGAAATTAATCTACCTGGTTTTGAAGTCTTG
AAATCCTCCTTTTGAAACTTCCATACTTGTATTAATTCCATAAAAAAAATGGGGTCAGGTTTATTGAAACTTTTTGG---
-------AGTTTGCAGTTCCTGCTAACAGTTTGGGTTTCACATGATATATACTAGCTCAGGCATGTCTCAAGTTATTGTA
CTAAGCCATTGTTATATGCATTAATCTTACT------TTGTGTAGACCAGCTAAGACAAGATGTTCTATTCTGGATTTCC
TTTTTATTTTCCTGTCTTTATCTGCTGTGCTATTAAGTTATGCGCAGTTACACAGACTTGTTTCTT-TTTCCTTTCATCT
CCAGGTGGTTGAGATTCCTAGAGGCAGCAAGGTTAAGTATGAGTTGGACAAAGCAACTGGTCTTATCAAGGTCAGCTTGC
ACTACATCGTTTTGCCTTTGTGTGCATCATGTTACTTAACTCCCTGTTGAATCCTAAAGGGTGTCATTAGAATCCAGCTG
TTATGCTCAGAATGTAAAAGGGAGATTAAAGACACTATCTATTAACACTGGATGCACAAATTGAGGAGTTCTGTTAATAA
TACTGACAAAAGGGCATGCCTTAATAATGTGCCACTAACTGTAGGTTAGTCAGTAATGTACCAC-ACATGAATGTGGAGC
ACTTGCATAGTTGCATCTTACAACTTCTTTTATTCTACATTGATAAAAGAAAACTTGAACGTTTTGTTTGTTCCAGGTTG
ATCGTGTTCTGTACTCCTCAGTTGTGTACCCACACAACTATGGCTTCATTCCACGCACACTCTGTGAGGATAATGACCCG
ATGGATGTCCTTGTCCTGATGCAGGTATCGAATGGATGCGGTGCTTAATTATTTATACATTATATAAGCTCTGTCCTAAC
GTCACTGCTCTTTCTCCTGGACAGGAACAAGTTGTTCCTGGTTGCTTCCTGCGTGCCCGTGCTATTGGGCTTATGCCTAT
GATTGATCAGGTTAGATTTCACCATCACTTGTTTACATTGAAGATGCTTTGTTTCATGTCAGCATGGACAAGAAATTATT
TGCTTGTACTCCCTCTGTAAGGAAATATAAGAGCGTTTAGATCACTACTTTAGTAATCTAAACGCTCTTATATTTCTTTA
CGGAGGGAGTATATTCCACTGCACAGTTTTAAGATTGCTTGATGCATGAGTTC---------------------------
-----------TACCACTTACAAAGTGGGTTCTATCTGACTGCTGAGTTCTTACATTAGTTTATCATTTGATATCACTAG
GGTGAGAAAGATGACAAGATCATAGCTGTCTGTGCTGATGATCCTGAGTACCGTCACTTCAGAGACATCAGTGAACTTCC
CCCGCATCGCCTACAGGAAATCCGTCGCTTCTTTGAAGACTGTACATTCCTCAACTATGATCAACTTCACTGTCCTTTCC
AAAATTCTATGTGCCAGATCATGAACTGAACTAACTGGATTCTGACCATTGAACTTG---------TGACAGACAAGAAG
AATGAAAACAAGGAGGTTGCAGTGAATGATTTCCTCCCAGCAGAAGATGCCATCAACGCAATCAAGTACTCGATGTGAGT
TTTGCTGCTTCATACTTGTACTAACATTGTC-TACTCTACTAGCATATGGACTCTATACTGCCTTACTGTTA-------T
TCCTTTTTTTTTTTGCGGGTGGCTTACTGTTACCTGAACCGA----TTCTTGCGCTGAACCGCTTAAAATGC-TATACGG
CAGGGACCTCTACGGTTCGTACATCATGGAGGGCTTAAGGAAGTGA----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------
>chr6A_1_TraesCS6A01G272300
TTTAGGACGTGATGCCATCTTCAGATTTTATTTTATTTTGTTTCGATTCCTAAGATCATGCTAACTTTGACTAATGTACT
ACAGTCCTGTGCTGGCATAGATCATTAGCCTATTCTAACTGCAGCTCGTGCCCATCTGTTAAATTAATGTTAGTTGTTAC
TAGTATTGTTTACTGATGTATTGCTAGTGTTCTTTTCTAAGTTATTTATGAGAAGGGGTGTGCACCTTACATTTGCCTTT
T--------GCGTGTGGCCTTGGAGTTACCCCGCCTAACTGTGGTCC-----TCTGGCCTTTCAGTTTGTTCAATGCCAA
CTAAGTTACTTAGATCTTTCTTTCTTTGTGACAATTATCTGTTTGCATGTGAATGATTTGCACTGACAGGAGAACACTGA
CGTGAGTAACTGAGTATTCAATTGGTTCTCCTGGTCATGGATGTTGTAGTAGTCATTTGGATTGGATAAGTGCATAATTT
GTCTGCTATTATGTGGTATGTTGAGTTATCTGGCAATAGAGACCAGAGTATTAGTATACATATTCAGGAAACAAGGAAAT
TGTGTATTCTTGAATACAACTGCGCTGTGTTTAGGGGAAGTTGCCAACACGAGGTTTCTTGGGATGGGCAAAGTTGAATC
TACTTGTATTGTCGACAGTTTCTGTGCTTATGTAGGTGTCAGTA------------------------------------
--------------TAGGTTTTCTGTTTTGCATAGTCCATACATTGGAGATTTCTTCTTGATGGTCAAGCACCAGGTTGA
AATTTATTTGCCCATTACATAGCTTTCACTACCCAACATGTAGTAGAGCATTATTCAGATTAATATGCGGAGGATGACAT
TGTTAGCTTCGAAA-----ATGTTTATAATTTAGTTTGTTGCATGAAATTTTGAAGTTCTGTAATGTTTTCTCACCCTAT
GTTTGGAGCCTCTCTTAACATGTCTTT---CAAGTATTTACATTTGCTTGTTAGTGTCCTTGATATAGAGAATCTAGTTA
CTTACCGATGATATTTTCTAATTATATAGCCATGGCTGGAGAAGCTGATGGGAAGACCTACCAGGTATCAAGGATGCCCC
CTGCTGCTCTCAACGAGCGCATCCTTTCTTCCATGTCTCAAAAGCACGTTGCTGCTCACCCATGGCATGACCTGGAGATA
GGTATTGTGCACCCTCAGTCGAACAATGTTAAGATAGTTTTGC-------------------------------------
----------------------TAAAATTTTGTACTGTGCTGCAAGTGTTTCTGTTTAATA---TCTTACTAGTTGCTAT
ATTTTCTTTGAAAGTGCAGGTCCAGGGGCCCCTGCAGTTTTCAACTGTGTAAGTTTA-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------TCTTTTAAATAGTTTAGCTTTAAATATAGTCGATGTTCTGATCAACTTGATCGATATCAAATTA
GAGCTT--CCTTCATGCTTGCATTTAGTTTCAAATTTCGCCATAGGGACTGAAATTAATCTACCTGGTTTTGAAGTCTTG
AAATCCTCCTTTTGAAACTTCCATACTTGTATTAATTCCATAAAAAAAATGGGGTCAGGTTTATTGAAACTTTTTGG---
-------AGTTTGCAGTTCCTGCTAACAGTTTGGGTTTCACATGATATATACTAGCTCAGGCATGTCTCAAGTTATTGTA
CTAAGCCATTGTTATATGCATTAATCTTACT------TTGTGTAGACCAGCTAAGACAAGATGTTCTATTCTGGATTTCC
TTTTTATTTTCCTGTCTTTATCTGCTGTGCTATTAAGTTATGCGCAGTTACACAGACTTGTTTCTT-TTTCCTTTCATCT
CCAGGTGGTTGAGATTCCTAGAGGCAGCAAGGTTAAGTATGAGTTGGACAAAGCAACTGGTCTTATCAAGGTCAGCTTGC
ACTACATCGTTTTGCCTTTGTGTGCATCATGTTACTTAACTCCCTGTTGAATCCTAAAGGGTGTCATTAGAATCCAGCTG
TTATGCTCAGAATGTAAAAGGGAGATTAAAGACACTATCTATTAACACTGGATGCACAAATTGAGGAGTTCTGTTAATAA
TACTGACAAAAGGGCATGCCTTAATAATGTGCCACTAACTGTAGGTTAGTCAGTAATGTACCAC-ACATGAATGTGGAGC
ACTTGCATAGTTGCATCTTACAACTTCTTTTATTCTACATTGATAAAAGAAAACTTGAACGTTTTGTTTGTTCCAGGTTG
ATCGTGTTCTGTACTCCTCAGTTGTGTACCCACACAACTATGGCTTCATTCCACGCACACTCTGTGAGGATAATGACCCG
ATGGATGTCCTTGTCCTGATGCAGGTATCGAATGGATGCGGTGCTTAATTATTTATACATTATATAAGCTCTGTCCTAAC
GTCACTGCTCTTTCTCCTGGACAGGAACAAGTTGTTCCTGGTTGCTTCCTGCGTGCCCGTGCTATTGGGCTTATGCCTAT
GATTGATCAGGTTAGATTTCACCATCACTTGTTTACATTGAAGATGCTTTGTTTCATGTCAGCATGGACAAGAAATTATT
TGCTTGTACTCCCTCTGTAAGGAAATATAAGAGCGTTTAGATCACTACTTTAGTAATCTAAACGCTCTTATATTTCTTTA
CGGAGGGAGTATATTCCACTGCACAGTTTTAAGATTGCTTGATGCATGAGTTC---------------------------
-----------TACCACTTACAAAGTGGGTTCTATCTGACTGCTGAGTTCTTACATTAGTTTATCATTTGATATCACTAG
GGTGAGAAAGATGACAAGATCATAGCTGTCTGTGCTGATGATCCTGAGTACCGTCACTTCAGAGACATCAGTGAACTTCC
CCCGCATCGCCTACAGGAAATCCGTCGCTTCTTTGAAGACTGTACATTCCTCAACTATGATCAACTTCACTGTCCTTTCC
AAAATTCTATGTGCCAGATCATGAACTGAACTAACTGGATTCTGACCATTGAACTTG---------TGACAGACAAGAAG
AATGAAAACAAGGAGGTTGCAGTGAATGATTTCCTCCCAGCAGAAGATGCCATCAACGCAATCAAGTACTCGATGTGAGT
TTTGCTGCTTCATACTTGTACTAACATTGTC-TACTCTACTAGCATATGGACTCTATACTGCCTTACTGTTA-------T
TCCTTTTTTTTTTTGCGGGTGGCTTACTGTTACCTGAACCGA----TTCTTGCGCTGAACCGCTTAAAATGC-TATACGG
CAGGGACCTCTACGGTTCGTACATCATGGAGGGCTTAAGGAAGTGATCTCCAGTTGGTGGACTGCGGATGCTACGCGATC
CGCCCTACGGCTTATCAATAGTACGACAGACATCTATGTTAACATGATGATCGAAAACCATCAGTCTGTTGGGGATC--T
ATATATACCTTCTGTCCATGCTGAGTCAAGCATGGGTACATTTTCCTTCCGTATATGCCATGTCAGGTCCAAGTATTTGA
CCTCTTGCTGGAACCTTTTTTGTCAAACCGTCTCTTGACAGAGCGGCTGCTTAATAGGAAATCAGCGTTACGCGAAGGCG
CGTATGCGTGCCTCCAGTCCGTTTAACCGTGTGATATCTTGATGTTGTGTGGTATCCGCTGGTTTTGCTTTCCCTGGGTT
CTTTTTTTCC------ATTAGTTTTCTGTGAACGTCCGTAGCTGTTGTCGCCATCATGGAATCCTGTGTAGTCTTTGTCA
CAGGAGTTCAGAGCTGTTGGAACTTTTTCAAGGAACGTCCTCACCTGGTGTCACCATCATCAGTTTTCTCTCTCTATTCA
TCTCAGCGGCATCCCTTTGCATCACGCCATCGCATTGCTAGTTTCTTTCACGTTTAGAGTCTCTGGATGA------TATC
CAATTCTGCGCCCGGG--CATCTACACCTGATGAACAGTAAATTCAAAAATAATAAAACTCTGATTTTTTTTTTGTAGAG
AAAGATGACTTAGTGCGTGAGGTA--TGTCAAATTTCAAAGCATTTGAACATTTGAGAAGTTCTCAGCAAAATAAACAAA
ATCGGATCCAGACAGTGCACAAGCAGTAAAGTTTTTCACGGACCTCAAATTTATCTCTTTTGCTAAGAGCTACTTGGACA
TCCAAATGCTCTGAAATTTGCCACGGACATCACGCACTTCGTCATCTTTCTCCACAATTTTTTTGAATTATTTTACTATT
TTTAATGATCTTTTTAGTCAGTCAAAACGCCTCACTCCTGGATGGTCCCCTTTTTTATGTTTAATCTCTAGTCTCTTGGA
TTGTGAATCCTCTTAATGTGGCGA
>chr6B_1
TTTAGGACGTGATGCCATCTTCAGATTTTATTTTATTTTGTTTCGATTCCTAAGATCATGCTAACTTTGACTAACGTACT
ACAGTCCTGTGCTGGCATAGATTATTAGCCTATTCTAACTGCAGCTCGTGCCTATCTGTTAAATTAATGTTAGTTGTTAC
TAGTATTGTTTACTGATGTCTTGCTAGTGTTCTTTTCTAAGTTATTTATGAGAAGGGGTGTGCACCTTACATTTGCCTTT
T--------GCGTGTGGCCTTGGAGTTACCCCGCCTAACTGTGGTCC-----TCTGGCCTTTCAGTTTGTTCAATGCCAA
CTAAGTTGCTTAGATCTGTCTTTCTTTGTGACAATTATCTGTTTGCATGTGAATGATTTTCACTGACAGGAGAACACTGA
TGC--------GAGTATTCAATTGGTTCTCCGGGTTATGGATGTTGTAGTAGTCATTTGGATTGGATAAGTGCATAATTT
GTCTGCTATTATGTGGTATGGTCAGTTATCTGGCAATAGAGACCAGAGTATTAGTATACATATTCAGGAAACAAGGAAAT
TGTGTATTCTTGAATACAACTGCGTTGTGTTTAGGGGAAGTTGCCAACACGAGGTTTCTTGGGATGGGCAAAGTTGAATC
TACCTGTATTGTCGACAGTTTCTGTGCTTATGTAGGTGTCAGTATTGCTGTCGAAAGATTAGGCAACTCATGCAAAAACA
TGAGAATACAGGGTTAGGTTTTCCGTTTTGCATAGTCCATACATTGGAGATTTCTTCTTGATGGTCAAGCACCAGGTTGA
AATTTATTTGCCCATTACATAGCTTTCACTACCCAACATGTAGTAGAGCATTATTCAGATTAATATGCGGAGGATGACAT
TGTTAGCTTCGAA------ATGTTTATAATTTAGTTTGTTGCATGAAATTTTGAAGTTCTGTAATGTTTTCTCACCCTAT
GTTTGGAGCCTCTCTTAACTTGTCTTT---CAAGTATTTACATTTGCTTGTTAGTGTCCTTGATATAGAGAATCTAGTTA
CTTACCGATGATATTTTCTAATTATACAGCCATGTCTGGAGAAGCTGATGGGAAGACCTACCAGGTATCAAGGATGCCCC
CTGCTGCTCTCAATGAGCGCATCCTTTCTTCCATGTCTCAAAAGCACGTTGCTGCTCACCCATGGCATGACCTGGAGATA
GGTATTGTGCACCCTCAGTTGAACAATGTTAAGATAGTTTTGC-------------------------------------
----------------------TAAAAATTTGTACTGTGCTGCAAGTGTTTCTGTTTAATA---TCTTACTAGTTGCTAT
ATTTTCTTTGAAAGTGCAGGTCCAGGAGCCCCTGCAGTTTTCAACTGTGTAAGTTTAACGAACTTGCAAAATGGATCTGT
TTATCATAAAGAGATTCATTGTTCCTGACCCTGCTTCACCTTAATTGTTATTTGAACAAAAAGATCACAATAAACTTTTG
GTAAAAGTTCTATCTTGGTCGGAGTGGGGATAGCATTTCTCTTCTGCATGTCTATGGAGTTTTGCAAAACCCAAACACCT
CAGAGATAGATATAGATCTTTTAAATAGTTTAGCTTTA------GTCGATGTTCTGATCAACTTGATTGATATCAAATTG
GAGCTTTACCTTCATGCTTGCATTTAGTTTCAAATTTCGTCATAGGGACTGAAATTGATCTACTTGGTTTTGAAGTCTTG
AAATCCTCCTTTTGAAACTTCCATACTTGTATTAATTCCAT-AAAAAAATGGGGTCAGGTTTATTGAGACTTTTTGGGCC
ATTCTAGAGTTTGCAGTTCCTGCTACCAGTTTGGCTTTCACATGATATATACTAGCTCAGGCGTGTCTCAAGTTATTGTA
CTAAGCCATTGTTATATGCATTAATCTTACT------TTGTGT-GACCAGCTAAGACAAGATGTTCTATTCTGGATTTCC
TTTTTATTTTCCTGTCTTTATCTGCTGTTTTATTAAGTTATGTGCAGTTACACAGACTTGTTTCTT-TTTCCTTTCATTT
CCAGGTGGTTGAGATTCCTAGAGGCAGCAAGGTTAAGTATGAGTTGGACAAAGCAACTGGTCTTATCAAGGTCAGCTTGC
CGTACATCGTTTTGCCTTTGTGTGCATCATGTTACTTAACTCCCTGTTGAATCCTAAAGGGTGTCATTAGAATCCAGCTG
TTATGCTCAGAATGTAAAAGGGAGATTAAAGACACTATCTATTAACACTGCATGTACAAATTGAGGAGTTCTGTTAATA-
--CTGACAAAAGGACATGCCTTAATAATGTGCCACTAACTGTAGGTTAGTCAGTAATGTGCCAC-ACATGAATGTGGAGC
ACTTGCATAGTTGCATCTTACACTA-CTTTTATTCTACATTGATAAAAGAAAACTTGAACGTTTTGTTTATTCCAGGTTG
ATCGTGTTCTGTACTCCTCAGTTGTGTACCCACACAATTATGGCTTCATTCCACGCACACTCTGCGAGGATAATGACCCG
ATGGACGTCCTTGTCCTGATGCAGGTATCGAATGGATGCGGTGCTTAATTATTTGTACATTATATAAGCTCTGTCCTAAC
ATCACTGCTCTTTCTCCTGGACAGGAACAAGTTGTTCCTGGTTGCTTCCTGCGTGCCCGTGCTATTGGGCTTATGCCTAT
GATTGATCAGGTTAGATTTCACCATCACTTGTTTAAATTGAAGATGCTTTATTTCATGTCAGCATGGACAAGAAATTATT
TGCTTGT-------------------------------------------------------------------------
----------ATATTCCACTGCACAGTTTTAAGATTGCTTGATGCATGAGCTCAG--AAAGGCAGCAAAAACAAAGGGTG
AAGAATTAGAGTACCACTTAAAAAGTGGGTTCTATCTGACTGCTGAGTTCTTACATTAGTTAATCATTTGATGTCACTAG
GGTGAGAAAGATGACAAGATCATAGCTGTCTGTGCTGATGATCCTGAGTACCGTCACTTCAGAGACATCAGTGAACTTCC
CCCGCATCGCCTACAGGAGATCCGTCGCTTCTTTGAAGACTGTACATTCCTCAACTATGATCAATTTCACTTTCCGTTCC
AAAATTGTATGTGCCAGATCATGAACTGAACTAACTGGATTCTGACCATTGAACTTGTGTTGTGTTTGACAGACAAGAAG
AATGAAAACAAGGAGGTTGCAGTGAATGATTTCCTCCCAGCAGAAGATGCCATCAACGCAATCAAGTACTCAATGTGAGT
TTTGCTGCTTCATACTTGTACTAAATTTG-TTTACTCTACTAGCATATGGTCTCTATACTGCCTTACTGTTATTTTCTTT
TCTTTTCTTTTTTTGCGGGTGGCTTACTGTTAACTGAACTGTTTCTTTCTTGCGCTGAACCGCTTAAAATGC-TATACGG
CAGGGACCTCTACGGTTCGTACATCATGGAGGGCTTAAGGAAGTGATCTCCAGCTGGTGGACTGCAGATGCTACGCGATC
CGCCCTACGGCTTATTAATAGTACGGCAGACATTTATGTTGACATGATGATCGAAAACCATCAGTCTGTCGGGGATC--T
ATATATACCTTCTGTCCATGCTGAGCCAAGCATGGGTACATTTTCCTTCCGTATATGCCATGTCAGGTCCAAGTATTTGA
CCTCTTGCTGGAACCTTTTTTGTCAAACCGTCTCTTAACAGAGCGGCTGCTTAATAGGAAATCAGCGTTACGTGAAGGCG
CGTATGCGTGCCTCCAGTCCGTTTAACCGTGTGATATCTTGATGTTGTGTGGTATCCGCTGGTTTCGCTTTCCCTTGGGT
TTTTTTTTCCCCATTAATTAGTTTTCTGTGAACGTCCTCAGCTGTTGTCACGATCATGGAATCCTGTGTAGTCTTTGTCA
CAGGAGTTCAGAGCTGTTGGAACTTTTTCAAGGAACGTCCTCAACTGGTGTCA-CATCTTCAGTTTTCTCTCTCTATTCA
TCTCAGCCACATCCCTTTGCATCACGCCATCGCATTGCTAGTTTCTTTCACGTTTAGCGTCTCTGGATGATCCGAATATC
CAATTCTGCGTTTGGGCTCATCTGCACCTCATGAACAGTAAATTCAAAAATAATAAAATTCTGAA--TTTTTTTGTGGAG
AAAGATGACTTAGTGTGTGAGGTGCGTGTCAAACTTTAAAGCATTTG---------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------
>chr6D_9
--------GTGATGCCATTTTCAGATTTTATTTTGTTTTCATAA-----CTAAGATCATGCTAGCTTTGATTAATCTACT
ACAGTCCTGTCCTGGCATAGATTATTAGCCTATTCTAACTGCAGCTCGTGCCTATCTGTTAAATTAATGTTACTTGCTAC
TAGTATTGTTTACTGATGTCTTGCTAGTGTTCTTTTGTAAGTTACTTGTGAGAAGGGGTGTGCACTTTACATTTGCTTTT
TGTGTGTGGGCGGGTGGCTTTGGAATTACCCCGCCTAACTGGACCTCTAGCGTCTAGCCTTTCAGTTTGTTGAATGCTAG
CGAGGTTACTTAGATCTGTCTTTCTTTGCGACAATTATCTGTTTGTATGTGAATGATTTTCACTGACAGGAGAACACTGA
CGT--------GAGGATTCAATTGGTTCTCCAGGTCATGGATGTTGTATTAGTCATTTGTATTGGATAAGTACATAATTT
GTCTGCTATTATGTGATATGGTCAGTAATCTGGCAATAGAGGCCAGAGTG-----ATACATATTCAGGAACAT-GGAAAT
CGGGTATTCTTGAATACAACTGTGCTGAGTTTA-GGGAAGTTGCCAACATGAGGGTTCTTGGGATGGGCAAAGTTGAATC
TACTTGTATTGTCGACAGGTTTTTGCAACAAACT----------------------------------------------
--------------------------------------------------------------------------------
AATTTATTTGCCCATTACATAGCTTTCACTACCCAACATGCAGTAGAGCATTATTCAGATTAATATGCGGAGGATGACAT
TGTTAGCTTCGACAGTAAGATGTTTAAAATTTAGTTTGTTGCATGAAATTTTGAAGTTCTGTAATGTTTTCCCGCCCTAT
GTTTGGAGCCTCTCTTAACATGTCTTTGTTCAAGTACTTATGTTTGCTTGTTGC---------TATAGAGAATCTAGTTA
CTTACCGATGATATTTTCTAATTATATAGCCATGGCTGGAGAAGCTGATGGGAAGACCTACCAGGTATCAAGGATGCCCC
CTGCTGCTCTCAATGAGCGCATCCTTTCTTCCATGTCTCAAAAGCATGTTGCTGCTCACCCATGGCACGACTTGGAGATA
GGTATTGTGCACCCTCAGTTGAACAATGTTAAGATAATTTTGCTAAGATATGATTTTGTATGATTTACTTTTTTGCTGTG
TTCTACAGAATTTTAAATTGCATAAAATTTTGTACTGTGCTGCAAGTGTTTCTGTGTAAATATGTCTTGCTAGTTACTAT
ATTTCCTTTGAAAATGCAGGTCCAGGGGCTCCTGCAGTTTTCAACTGTGTAAGTTTA-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------TCTTTCGAATAGTTTAGCTTTAAATATAGTCGATGTTCTGATTACATTGATTAATATCAGATTT
GAGTTTTACCTTCATGCTTGCATTTATTTTCAAATTTTGCCATAGGGACTGAAATTAACCTACCTGGTTCTGAAGTCTTG
AAATCTTCCTTTTGAAACTTCCAGACTTGTATTGATTCCAT-AAT-AAATAGGGCCAGGTTTATTGAAACTTTTTGGGCC
ATTCTAGAGTTTGCAGTTCCTGCTACCAGTTTGGCTTTCACGTGATATATACTAGCTCAGGCATGTCTCAAGTTATCATA
CTAAGCCATAGTTGTATGCATCAATCTTACTCAAAGATTGTGTAGACCAGCTAAGACAAGATGTTCTATTCTGGATTTCC
ATTTTATTTTCCTGTCTTTATCTGCTGTGTTATTAAGTTCTGTGCAGTTACACAGACTTGTTTTTTCTTTTCTTTCATTT
CCAGGTGGTTGAGATTCCTAGAGGCAGCAAGGTTAAGTATGAGTTGGACAAAGCAACTGGTCTTATCAAGGTCAGCCTGC
AGTACATCGTTTTGCCTTTGTA-GCATCATGTTACTTAACTCCCTGTTGAATCCTAAAGGGTGTCGTTAGAATCCAGCTG
TTATGCTCAGAATGTAAAAGGGAGATTAAAAACACTATCTATTAACACTGCATATATAAATTA------------AATAA
TACTGACAAAAGGTCATGCCTTAATAACGTGCCACTAACTGTAGGTTGGTCAGTTAAGTAGTAGTACATGAATGTGGAGA
ACTTGCATGTTATGGCTATT-------TTTTTTTCTGCATTGACAAAAGAAATCCTGAACGTTTTGCTTGTTTCAGGTTG
ATCGTGTTCTTTACTCCTCAGTTGTGTACCCACACAACTATGGCTTCATTCCGCGCACGCTCTGTGAGGATAATGACCCA
ATGGACGTCCTTGTCCTGATGCAGGTATCTAATGGATGTGGTTCTTAAACATTTGTACACTGTATAAGCTTTGTTCTGAC
GTCACTGCTCTTTCTCCTGGACAGGAACAAGTTGTTCCTGGTTGCTTCCTGCGTGCCCGTGCTATTGGGCTTATGCCTAT
GATTGACCAGGTTAGATTTCGCCATCACTTTATTACATTGAAGATGCCTTGTTTGATATCAGTATGGACAATAAATTATT
TGCTTG--------------------------------------------------------------------------
-----------TATTCCACTGCACAATTTAAAGATTGCTTGATGCATGAGACTTGACAAAGGCAGCAAAAACAAATGAAG
AAGAGTTAGAGTACCATTTACAAAGTGGGTTCTATCTGGCTTCTGAGTTCTTACATTAGTTAATCATTTGATGTCACTAG
GGTGAGAAAGATGACAAGATCATAGCTGTGTGTGCTGATGATCCTGAGTACCGTCACTTCAGAGACATCAGTGAACTTCC
CCCGCATCGCCTTCAGGAGATCCGTCGCTTCTTTGAAGACTGTACATTCCTCAACTATGATCAACTTCACTGTCCATTCC
AAAATTCTATGTGCCAGATCATGAACTGAACTAACTGGATTGTGGCCATTGAACTTG---------TGACAGACAAGAAG
AATGAGAACAAGGAGGTTGCAGTGAATGATTTCCTCCCAGCAGAAGATGCCATCAACGCAATCAAGTACTCGATGTGAGT
TTTGCTGCTTCATACTAGTACTAACATTGTTTTACTCTACTAGCATATTGACTCTATACTGCCTTCTGTTATCC------
-----TTTTTTTTTGCGGGTGGCTTACTGTTATCCGAACCGA----TTCTTGCGCTGAACCGCTTAACTGCTATATATGG
CAGGGACCTCTACGGTTCGTACATCATGGAGGGCTTAAGGAAGTGATCTCCAGTTGGTGGACTGCAGATGCTACGCTATC
CGCCCTACGGCTTATCAATAGTACGGCAGACATTTATGTTAACATGATGATCGAAAACCATCAGTCTGTCGGGGATATAT
ATATATACCTTCTGTCCATGCTGAGCCAAGCATGGGTACATTTTCCTTCCGTATATGCCATGTCAGGTCCAAGTATTTGA
CCTCTTGCTGGAACCTTTTTTGTCAAACCGTCTCTTAACTGAGCGGCTGCTTAATAGGAAATCAGCGTTACGCGAAGGCG
CGTGTGCTTGCCTCCAGTCCGTTTAACCGTGTGATATCTTGATGTTGTGTGGTATCCGCTGGTTTCGCTTTCCCTGT--T
TTTTTTTTCC------ATTAGTTTTCTGTGAACGTCCTCAGCTGTTGTCACCATCATGGAATCCTGTGTAGTCTTTGTCA
CAGGAGTTCAGAGCTGTTGGAACTTTTTCAAGGAACGTCCTCACCTGTTGTCACCGTCATCAGTTTTCTCTCTCTATTCA
TCTCAGCCACATCCCTTTGCATCACGCCATCGCATTGCTAGTTTCCTTCACGTTTAGATTCTCTGGATGAACTGAATATC
CAATTCTACGCTCGGGCTCATCTACACCTGATGAACAGTAAATTCAAAAATAATAAAATTCTGAA--TTTTTTTGTGGAG
AAAGATGACTTAGTGCGTT---------TCAAATTTCAAAGCATTTGGACATCTAAGTAGTTCTTAGCAAAATAAACAAA
ATCAGGTCCAGACAGTGCAC------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------
>SNPs
--------------------------------------------------------------------------------
----------------------S-----------------------------S---------------------------
-------------------S------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------S-----------------------------------------S--------------------
---SSSSSSSS--------------------S------------------------------------------------
--------------------S-S---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------S--------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------S------------------------------------------------------------------
-------------------S------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------S-----------S
--------------------------------------------------------------------------------
-----------------------------------------S--------------------------------------
-------------------------S--------S---------------------------------------------
--------------------------------------------------------------------------------
-----------------------------S------------S-----------------------------------S-
--------------------------------------------------------------------------------
-S------------------------------------------------------------------------------
--------------------------------------------------S---S-------------------------
-------------S------------------------------------------------------------------
----------------------SSSS------------------------------------------------------
--------------------------------------------------------------------------------
-----S------------------------------------------------S-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSS----------------------------------------S-----------------------------
-------------------------------------------------------------S----------S-------
--------------------------------------------------------------------------------
------------------S--------------------------------------------------------S----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------S-------------------------------------------------
--S-----------------------------S-----------------------------------------------
-----------------------------------------------------------------S--------------
-------------------------S-------S-----------------------------------S----------
-------------------------S------------------------------------------------------
------------------------------------S-------------------------------------------
-----------------------------------------------------------------S------------S-
S------------------------------------SS----------S------------------------------
--------------------------------------------------------------------------------
-------SS-----------------------------------------------------------------------
-----------S----------------------------------------------S-----SSS---------S---
-----------------------S-----------------------S----S-S--S------S---------------
---S-S--------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSS
>forward_404
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------TGACAGGAGAACACTGA
CGTG----------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_1680
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------------A
GAGCTTCCTTCATGCTTGCA------------------------------------------------------------
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------------------------
>forward_1220
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------------------------------------A
GGTATTGTGCACCCTCAGTC------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------
>reverse_3473
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------CCTGAACCGATTCTTGCGCT----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------
>forward_3139
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-CCGCATCGCCTACAGGAA-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------
>reverse_4505
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------AAACGCCTCACTCCTGGATG------------------------------------
------------------------
