>input_sequence_37033
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ATGGTGAGTCACCCC----------CCGTTCGATTCCGTCGCGTCTG---------------GCCTGGGATCCGGGCACG
CGTGGGTCTGATCTGTTTTCCGTT-TGGTCTGTCGCAGGCGCTGCCGAACCAGAACACCGTCGATTACCCCAGCTTCAAG
CTCGTCATCGTCGGCGATGGCGGGACTGGTGAGTCTCGTCCCTTCCCCCGCCTCCCTGTTCGTTTCGTTCCGCTAGACGA
GGCCGTGATCCGTTCGATGCGGCCGCTTGTCGCCGTCGTTTCGGCGAGATCTGAGTCGTCTTACGGCTTTGCGTGGCCTC
CGGATGGAATCTGATGTCCTATTAGGCGTTTGAGAGATTGCGGGGTTGATTGTAATCCGTGCCACGAAAGGGTTTCGTGA
TTCGTT-TGCCAGCGGGAATCACCTTTTGATGCTTTCCGTTTGAATTCG-------------------------------
---------TGGAAAACAGAGTTAGGAGTTGCGAAAGGGATTTAGATCAGGGAGGTCTTTATGCCTTTGCATCATATATT
TTACCAATAGGAAGGAAAAAGTTTGTGTAACAAGACAAGACTATGTTTGTCGGATTT-AACTTTTTTCTTATACGCAGTT
GCGCCA-TAGTT-ATAGCATCTGTATGGAGATTAAACAATTACCAGCAAATACTATGTATTAAAAGGATTATTTGAACAT
GGGAGTGTGTTTTCTATGA---ATTATTAGATCGAATATTACTGATAGGCAAAGACGTGGTAGCTTTACTGTATACGAAA
TGTTCCATTTTTCATGCACCAGTGTAGAAGGTCTGCCTATTAGAGTTA--------------------------------
---------TGCTAATAAGTGAAAAATCCCTTGATATCTAGATAGTTTTGTCTCTGTACCGAATTACTTCATTGGCATCT
GCTAGATTGGTATCTCATGCATCATATGTTCTAATC-AAACATGAACCTAACATG----CCATGTTTCAAATTGCAATTG
TTAGTAATTTTTTGC-CTGCCTAGTCATTTGTTCTTTATTAGCTTCCTTCCTTGTCTGG---TTATCCTTCTCCCACCAG
TGACAGCAGAGGTTCTGATACTGTTATCTGTTTGCAGGCAAAACCACTTTTGTGAAGAGGCATCTCACTGGAGAGTTTGA
GAAGAAATACGAGCGTATGTGTGAATTGTTCTAAGTTTCTCTTGTGCACCTATACTGCTTGGCGTGCATCATGGCTAAGA
AATTCAACATTTTTC-CCCCTTTGCAGCCACCATTGGTGTTGAAGTTCACCCATTGGATTTCACCACTAACTGCGGAAAG
ATCCGTTTCTACTGCTGGGACACTGCTGGGCAAGAGAAGTTTGGTGGCCTTAGAGATGGATACTAGTAAGTGTTTCGTAG
TGGATTTTAGCTATTTTTTCTGCACACACGACTGTTGTGTAGCTATCTCAATATTAGATGTATTGGTTAAGGCGTATTGG
TTTACTTGGCTAA--------------------------TTTAGTTGTTTGACTGATTTCTT-----TTTAATCATTTGT
GCAGTATCCATGGTCAGTGTGCGATTATCATGTTTGATGTCACTTCAAGGCTGACCTACAAGAATGTTCCTACGTGGCAC
AGGGACCTGTGCAGGTTTGCTTCTGAAGAAGCAATCATCTCTGCTTCACTCAATGTAATGTTTTGCCGTGGT----GTTC
TGATGTCTGGATGTTAACCTGTTGCAGGGTTTGTGAGAACATCCCCATTGTCCTGTGCGGCAACAAGGTTGATGTGAAGA
ACAGGCAGGTTAAGGCCAAGCAGGTGACATTCCACAGGAAGAAGAACCTGCAGTACTATGAGATCTCTGCCAAGAGCAAC
TACAACTTTGAGAAGCCCTTCCTTTACCTTGCAAGGAAGCTGGCTGGGTAATTTTCTTTCATCCCCATTGCTTTCCTCTG
CCTGTAACCTTGCATCATCGTTCTTG---TACTAAGTAATCTTTGCTGATGACAGTGATCCCAACATCCACTTCGTTGAA
GCAGTGGCCCTTAAGCCCCCGGAAGTGACCTTCGACCTGGCCATGCAGCAACAGTAAGTGCCTTCCTCTGTTCTCTACC-
-------ATCTTCACTATGATTGCCCGGTTTCAGGTTGCAA--TCAACTGAATGAATGAAAGAAATGCTGATTGCTTTTT
GATGCGAATTGTGCAGGCACGAGGCTGAGCTTGCGGCTGCAGCGGCACAGCCACTGCCCGACGACGATGACGATCTGATC
GAGTAG--------------------------------------------------------------------------
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>chr1B_1_TraesCS1B01G443100
GCTGAGGCGAAAAAAGTGTTTTGGGTGGTTCTCTGTTGGTTTGGAAATATCTGTGGATTTATAGAAGTCGATTTAGGTCA
AA-GAAGTTGCGTGGGGCCCACGAGCTTAGGTGGCGCGCCTGGTGAGCTTGTGGCTCTCTCATGGCTCTTCTGTCCTCCT
CCCGGAGCTTCTAGGGTCCCTTCTGGTTCAGAAAAA--------------------------------------------
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------------------------------ATCACAGTAAAGTGTCATCATGTTTGGACTTAGTTTGATATTGATTTTTC
GAAAAACCAAAAACATGCAAAAAATAACAGGAATTGACACTGGGCACTGATCCAGAAAGAATAGGCTAGTTCC-------
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-------------------------------------------------------------------------CTCTCAC
ATCTCAACCGGGCGAATAAGGATGTTTTTTTGTGATTAAAGATTCTTTTTTCTTTAAGTAATAATTGTCGTTAAAGATCG
GATGGCTCCCTCTTGCATCATGTCCGTGGACCACGTCCGGACAAACATG-AAAAAGACTTTTAAACGGGCTATAAGCCCG
CTAT-------------------AATAGCTCTTCAGCGTTCCCCTCAAAATGGCCCAAGTAGTAGTAGTAGTACTACTCA
CAACGGCAAGTGTGAAACGGGCGACTGAAACCGGCGGCCCCTTTCACGAT------------------------------
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--------------------------------------------------------ATACGTGGACCGACCGTTCTTTCT
GGAATTCTGGAGCACAG-AAAAGAGGCAGCCCACGACGCG-----CCGCTCCCCGACCCAACGGCAGCGCCCGGATCGGA
CGGCCGGGAACCTCGCGTGGGACGAAAGCTAATCGACCCCCGCCCCCGCTGCGATCCGCCGCCCACCGCCGATCCAGCGG
CCACCATTCCTGCGTCCATCCAAAGCTAACCAAACCCCCCACACGCGCCCCGCAAAATAAAAAAAAAATCCCATTTCCCC
CCCAAAAAAAACGCTATATAAAACCCCACCCCCTCC-------------GCCTCCACGGCCTCCCCAACTCCGATTCGAA
ATACTCCTCCTCCTCCCCTAGGGTTTTGCTGCCCCCCTCCACACCCGTGCCGCCGCCGCCGTCGCCGCCCGCGTCCCCCC
ATGGTGAGTCACCCC----------CCGTTCGATTCCGTCGCGTCTG---------------GCCTGGGATCCGGGCACG
CGTGGGTCTGATCTGTTTTCCGTT-TGGTCTGTCGCAGGCGCTGCCGAACCAGAACACCGTCGATTACCCCAGCTTCAAG
CTCGTCATCGTCGGCGATGGCGGGACTGGTGAGTCTCGTCCCTTCCCCCGCCTCCCTGTTCGTTTCGTTCCGCTAGACGA
GGCCGTGATCCGTTCGATGCGGCCGCTTGTCGCCGTCGTTTCGGCGAGATCTGAGTCGTCTTACGGCTTTGCGTGGCCTC
CGGATGGAATCTGATGTCCTATTAGGCGTTTGAGAGATTGCGGGGTTGATTGTAATCCGTGCCACGAAAGGGTTTCGTGA
TTCGTT-TGCCAGCGGGAATCACCTTTTGATGCTTTCCGTTTGAATTCG-------------------------------
---------TGGAAAACAGAGTTAGGAGTTGCGAAAGGGATTTAGATCAGGGAGGTCTTTATGCCTTTGCATCATATATT
TTACCAATAGGAAGGAAAAAGTTTGTGTAACAAGACAAGACTATGTTTGTCGGATTT-AACTTTTTTCTTATACGCAGTT
GCGCCA-TAGTT-ATAGCATCTGTATGGAGATTAAACAATTACCAGCAAATACTATGTATTAAAAGGATTATTTGAACAT
GGGAGTGTGTTTTCTATGA---ATTATTAGATCGAATATTACTGATAGGCAAAGACGTGGTAGCTTTACTGTATACGAAA
TGTTCCATTTTTCATGCACCAGTGTAGAAGGTCTGCCTATTAGAGTTA--------------------------------
---------TGCTAATAAGTGAAAAATCCCTTGATATCTAGATAGTTTTGTCTCTGTACCGAATTACTTCATTGGCATCT
GCTAGATTGGTATCTCATGCATCATATGTTCTAATC-AAACATGAACCTAACATG----CCATGTTTCAAATTGCAATTG
TTAGTAATTTTTTGC-CTGCCTAGTCATTTGTTCTTTATTAGCTTCCTTCCTTGTCTGG---TTATCCTTCTCCCACCAG
TGACAGCAGAGGTTCTGATACTGTTATCTGTTTGCAGGCAAAACCACTTTTGTGAAGAGGCATCTCACTGGAGAGTTTGA
GAAGAAATACGAGCGTATGTGTGAATTGTTCTAAGTTTCTCTTGTGCACCTATACTGCTTGGCGTGCATCATGGCTAAGA
AATTCAACATTTTTC-CCCCTTTGCAGCCACCATTGGTGTTGAAGTTCACCCATTGGATTTCACCACTAACTGCGGAAAG
ATCCGTTTCTACTGCTGGGACACTGCTGGGCAAGAGAAGTTTGGTGGCCTTAGAGATGGATACTAGTAAGTGTTTCGTAG
TGGATTTTAGCTATTTTTTCTGCACACACGACTGTTGTGTAGCTATCTCAATATTAGATGTATTGGTTAAGGCGTATTGG
TTTACTTGGCTAA--------------------------TTTAGTTGTTTGACTGATTTCTT-----TTTAATCATTTGT
GCAGTATCCATGGTCAGTGTGCGATTATCATGTTTGATGTCACTTCAAGGCTGACCTACAAGAATGTTCCTACGTGGCAC
AGGGACCTGTGCAGGTTTGCTTCTGAAGAAGCAATCATCTCTGCTTCACTCAATGTAATGTTTTGCCGTGGT----GTTC
TGATGTCTGGATGTTAACCTGTTGCAGGGTTTGTGAGAACATCCCCATTGTCCTGTGCGGCAACAAGGTTGATGTGAAGA
ACAGGCAGGTTAAGGCCAAGCAGGTGACATTCCACAGGAAGAAGAACCTGCAGTACTATGAGATCTCTGCCAAGAGCAAC
TACAACTTTGAGAAGCCCTTCCTTTACCTTGCAAGGAAGCTGGCTGGGTAATTTTCTTTCATCCCCATTGCTTTCCTCTG
CCTGTAACCTTGCATCATCGTTCTTG---TACTAAGTAATCTTTGCTGATGACAGTGATCCCAACATCCACTTCGTTGAA
GCAGTGGCCCTTAAGCCCCCGGAAGTGACCTTCGACCTGGCCATGCAGCAACAGTAAGTGCCTTCCTCTGTTCTCTACC-
-------ATCTTCACTATGATTGCCCGGTTTCAGGTTGCAA--TCAACTGAATGAATGAAAGAAATGCTGATTGCTTTTT
GATGCGAATTGTGCAGGCACGAGGCTGAGCTTGCGGCTGCAGCGGCACAGCCACTGCCCGACGACGATGACGATCTGATC
GAGTAGAGAGAGGATGATGAGTC-TGTCTGTCTTATCAATCAATACTTTGAGAGCCAGAGACTGTGCGAGTCGGTTTTAG
GTTGAAGGCTTGATTTGGAGTAGTCAAGCCGGATGTTTTTCCTGTCTGCCTTGCCTTGTCTGGTGGGCTGCAAACTGTTT
GTGTGACATTGATCTACATGATGTTGCTTGCCATGGATTTGTTGTTGGCCACCTTGATGGTTCATCAGTATTATTATGCC
TGTTGGCTCAAATGTGTGGATCATATATTTATCTTGAGCATCTGTGTGCTTGCTATG-----CGTTTTGGGCTAAATAGG
TTCGCTGCTGGACATT-TCGATG------------------------------------------------------AAA
GCAGCAAAAGGGATTTTATTTCTCTTTTTTTGAGCTGGTGATTTTGTTTTGTCTCTAGATAAACACAATATG--------
------TCTGTTGAAGATCTCGGTCTTATCAGCATTTGAACGAAT-----------CAATATTTAAATCATAAGAACAAT
TCAATTTCTTGACTGGGCAAATTGAAGCCCAAAAGAGGAAGACCATTGGTCAAATCATACCTTACCAA------------
--GGCTAGTAGTTCTGCTTAAGCTTGAGTTGCTCTTACAAATCGTAAGAAGCATGTCC----------------------
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----------------------------------CAAGAAGCGACACACAAGA---------------------------
------------------------------------------AAAACCACATCCATAGGGTAAGCGCAATCTTGGTTGGG
TCATCGAGCATGAACAAAAAGATATCATTCATACCCACTTCTCCGATGCCATGGGAAAAGAGGGCTCTAGGCCAAAAGAT
TTCAACTGGGAGGAGCTCAACCTTGACGTACGGGACTTGCATGACCTTGAGGCCCCTTTCACCA-GGAGGAGGTATGGGA
GGCCAT-CAACCAAATGCCAAATGGCAAGGCACCCGCGCTGGATGGGTTCATCGGGCATTTTTTTGGAAGTGTTGGGACA
TTGTTAAGGTTGTACTCATGAGAGCCAACCATCATTTTAGTAACCTCCATGGTGTAAATCTCCAATGGTTAAACTCTGCA
AACATTGCGCTTTTGCCCCAGAAAGAGGTTTTT
>chr1A_10
---------AAAAAAGTGTTTTGGGTGGTTCTCTGTTGGTTTGGAAATATTTGTGAATTTATAGAAGTTGAATTAGGTCA
AACGAAGTTGCATGGGGCCCACGAGCTTAGG-GGCGCGCCTGGTGAGCTTGTGGCTCTCTCATGGCTCTTCTGGCCTCCT
CCCGAAGCTTCTAGGGTTCCTTCTGGTCCAGAAAAAAGCACAATAAAGTTTTATCGTGTTTGGACTTAGTTTGATATTGA
TTTTCTGGAAAACCAAAAACATGCAAAAAAACAGGAACTGGCACTAGGCACTTGGTTAATAGGCTAGTCCCAAAAATTGA
TATAGAATAGCATAAAAATGCATGTAAAGCATTCAAGATTGATAATATAATAACATGAAACAATAAAAAATAGATATGTT
GGAGACATATCAGGACCCCTGTCGGTCCGCGGAGCAGTCCGGAGTCTGTTTTTCCCGCAAATCGAAGCAACTTGTGGGGA
GCAATGCGGGAGTTCGGACATCCACTTGACCATCAAAAAGCAATCACATGATCCTCCTCTCTTTTCTCCCTCCCTCTCTC
TTCTCCCAATCGCGCACCACACACACACACACACACATACCAACCACATGCATGCCCCCCTCCTCTGGCCTCCTTTCGAA
GCTTCTAGGGCCCCTTCGGGTCCAGAAAAGATCACAGTAAAGTTTCATCGTGTTTGGACTTAGTTTGATATTGAATTTCT
GAAAAACCAAAAACATGCAAAAAAACAAA--AAATGGCACTGGGCACTGGGTT------AATAGGCTAGTCCCAATTGAT
ATAGAATAGCATAAAAATGCATATAAAGCATTCAAGATTGATAATATAATAGCATGAAACAATCAAAAAATTTAGATACA
TTGGAGACGTATCAGGACCCTTATCGATCCGTGGAGCAGTCCGCAGTCTGTTTTTCCCACAAATCGAAGCAACTCGTGGG
GAGCAATGCGGGAGTTCGGACATCCACTTGACCATCAAAAAGTAATCACATGATCCTCCTCTCTTCTCTCTCTCTCTCTC
TCTCTCTTCCCCCAATCGCGCACCACACACACATACCAACCACATGCATGCCTCCCCTCCTCTGGCCTCTCCTCTCTCAC
ATCTCAACCGGACGAATAAGGATGTTTTTT---GATTAAAGAT--TTTTTTCTTTGAGTAATTGTG---GTTATAGACCG
GATGACTCCCTCCTGCATCATGTCCGTGGTCCACGTCCGGACGAACATG-AAAAAGACATTTAAACGGGCTATAGGTAGT
AGGGCTTTGCACGTCCGGATCGAAATAGCTCTTCAGTGTTCCCCTGGAAATGGCCCAAGTAGT---------AGTACCCT
CAAACGCAAGTGTG-AACGGGCGACTGAAACCGGCGTCCCCTTTCATGGTACGTGGACCGACCGTTCTTTCTGGAACACA
CATAAAACTCATCTAGGTTAACTTTTGGGGGTTCCTGAATTTAATTTTGCCGATGCGCTTTCAGTAGGAGGAGACATCCT
CGTTGACGACGAGGCGCTTACGATAACTTCTTAAATCTTAAGATGATATGCCAGCTTAGTCTTTCAAAGGTGGTCATAGG
GGTAGGACGTGCGTGTGTACATTCATATGGGTGAGTGTATGTGCGAAGTACGAGCGTTTGCGTCTGTATTGTGTTAAAAG
AAACCCTAGTCGCCTATGAAACACCTACTACGCCGGGTACGTGCAGACATTTGTTAGGCATCGTTGCAAAAACGATTGGT
TGTTGAGTATTTTTTTTAGAATTAGTTGGTTGTTAAGTTGAGACACAAACTTAAAAAAAATGAGACCAACTCAAGGGGTA
ATTCTCGTTGGCATTTTTTTATATAGAAGAAACTTCACAAACACCACGTGTTCGAGTCGAGACTCGAACTTGAATGGGCT
GATAGCAATCTCAACTGCCCAACCAACGGGTCGACGCCCATCAGTATTGAAAAGAAAAGAAAACCTCACCAGTACCACTC
CCTCAGGCCCAAGTGGGTGTGAAAGTGGGGGGACGAATTCAGCCGCCCGGTTCACGATACGTGGACCGACCGTTCTTTCT
GGAATTGTGGAGCACAGAAAAGAAGGCAGCCCAGGACGCGCCGCCCCGCTCCCCGACCCAACGGCAGCACCCGGATCGGA
CGGCCGGGAACCTCGCGTGGGACGAAAGCTAATCGCCCCCCGCCCCCGCTGCGATCCGCCGCCCACCGCCGATCCTGCGG
CCACCATTCCTGCGTCCATCCAAAGCTAACCAAACCCCCCACACGCGCCCCGCACACAAAAAATAAAATTCCATT--CCC
CCCCAAAAAAACCCTATATAAAACCCCCCATCCTCC-------------GCCTC--------CCCCAACTCCGATTCGAA
ATACTCCTCCTCCA--CCTAGGGTTTTGCTGCCTCCCTCCCCCA--------CCGCCGCCGTCGCCGCCCGCGTCCA-CC
ATGGTGAGTCCGGCGCTCACGGTTTCCGATTGATTCCGCTGCGTCTG---------------GCGTTGGATCCGGGC---
-------CTGATCTGTTTCGATTTGGCTT-TGTCGCAGGCGCTGCCGAACCAGAACACCGTCGATTACCCCAGCTTCAAG
CTCGTCATCGTCGGCGATGGCGGGACTGGTGAGCCTCCTTCTCCCCTTACTCTCGTTCGTTGTG--GTTGTGGTAGATTA
GGCCGTGATCTGTCCGATGCGCCTGCTTGTTGCCGTCGTTGCGGCGAGATCTGGCTCAGTTACCAG-TTTGCCTGGCCTC
CGGATGGAATCTGACGCCCTATTAGGTGTTGGG--GATTGCGGGGGCGACCCTAATCCGTGCCACGAAAGGGTTTCGTGG
TTGGTCCTGCCGTAGGGAATCAGTTTTCGATGCTTTCCGTTTTGGAAAGCAG----------------------------
----------GGAAAACAGAGTTAGTAATTGCGAAAGGGATTTAGATCATGGAGGTCTCGATGCTTTTGCATCATATATT
TTACCAATAG-----------------------------ACTATGTCTGTCAGATTG-AACCTC-TTCTTATACGCAGTT
GCTCCAATAGTTTATAGCAACTGAATATAGAGTGAAAAATTACCAGCAGATTCTATGTATTAAAAGGATTATTTGAACAG
GGGAGTGTGTGTTCTTTGAATTATTATTAGATCGGACATTACTGAAAGGCAAAGATGGAGTAACATTACTGTTTATGAAA
TGTTCCATTTTTCATGCACCAGTGTAAAAGGTCTGCCTATTAGAATTGTGATTAGGTGCAATGGAAGACCTAATTTGAAG
TAATAGTTGTGCTTACAAATGAAAATTCCCTTGATATCTAGATAGTTTTGTCTCAGTTCTGAATCACTTTAGTGCCATCT
GCTAGATTGGTATCTCATGCATCATGTATGCTAATCAAAACATGAACCTACCATA----GCATTGCTC-AATTGCAATTG
TCAGTATTTTTTTTTACTGCTCAGCCCT---TTCTTCATTAGCATCCTGCTTTGCCTGG---TTATCCTTCTCCAACCAT
TGACAGCAGAGGTTCTGATGCTGTTATCTGTTTGCAGGCAAAACCACATTTGTGAAGAGGCATCTCACTGGAGAGTTTGA
GAAGAAATACGAACGTATGTGTA-------------TTCTCTTCTGCACCTATGCCGCTTGGCATGCATCATGTCTAAGA
AATTCATCATTTTTT-CCCTTTTGCAGCCACCATTGGTGTTGAAGTTCACCCGTTGGATTTCACCACTAACTGTGGAAAG
ATCCGTTTCTACTGCTGGGACACTGCTGGGCAAGAGAAGTTTGGTGGCCTTAGGGATGGATACTAGTAAGTGTTTTGTGG
TGGATTTTAGCTATTTTTTTCTG-CACATGACTGTTGTGTAGCTGTCTAAATAGTAGATGTATTTGTTAGGGTGTATTTA
TTTCCTTCGATTTATCAGTATAATGCTTACCTTATTGTTTCTATTTGTTTGACTGATATTTCTTTC--TTAATTATTTGT
GCAGTATCCATGGTCAGTGTGCGATTATCATGTTTGATGTCACTTCAAGGCTGACCTACAAGAATGTTCCTACGTGGCAC
AGGGACTTGTGCAGGTTTGCTTCTGAAG---CAATCATCTCTACTTCACCGAATGTGATATTGTGCTATCATTAGAGTTC
TGATGTCTGTATATTAACCTGTTGCAGGGTTTGTGAGAACATCCCCATTGTGCTGTGTGGCAACAAGGTTGATGTGAAGA
ACAGGCAGGTTAAGGCCAAGCAGGTGACATTCCACAGGAAGAAGAACCTCCAGTACTATGAAATCTCTGCCAAGAGCAAC
TACAACTTTGAGAAGCCCTTCCTTTACCTTGCTAGGAAGCTGGCTGGGTAATTTTCTTTCATCCCCATTGCTTTCCTTTG
CCTGTAATATTGCATCATTGTTCTTG---TACTAAGGCTTTTTTGCTGATGTCAGTGATCCCAACATCCACTTCGTCGAA
GCAGTGGCCCTTAAGCCTCCGGAAGTGACCTTCGACTTGGCCATGCAGCAACAGTAAGTGACTT----------------
---------GTTCACTGGGATTGTTCATGTTCAGTTTGTATGTTCAAATGAATGAAGTAGTGGATTGCTCATTTGCTTTT
T-TGCGACTTCTGTAGGCACGAGGCTGAGCTTGCGGCTGCAGCGGCACAGCCACTGCCTGATGACGATGACGATCTGATC
GAGTAGAGAGAGGATCATGA-----GTCTGTCTTATCAATCAATACTTTGAGAGCCAGAGACTATGCGAGTCGGTTTTAG
GTTGAAGGCTTGATATGGAGTAGTCAAGCCGGATGTTTTTCCTGTCTGCCTTGCCTTGTCTGGTGGGCTGCAAACTGTTT
GTGTGACATTGATCTACATCATGTTGCTTGCCATGGATTTGTTGTTCGCCACCTTGATGGTTCATCAGTATTATTATGCC
TGTTGGCTCAA-TGTGTGGATCATATATTTATCTTGAGCATCTGTGTGCTTGCTATGCGCTTGGTTTTGTTATT-ATAGG
TTCGCTGCCGGACTATGTCAATGGCCAGGTAGGCACTCGCTACACTTTTTTTTTA-------------------------
-------------------------------GAGCTGGTGA-TTTTGTTTATCTC-AGATAAACACAATTTGCGGTAGCA
CAGCCCTCTGTTGAAGAGCTCGGTCTAATCAGCATTTCCGATGATGTTGAACTTGTTAATATTTAAATCATTAAGACAAT
TCAATTTATTGACTGGGTAAATTGAAGCCCAAAAGAAGGAAG---------------TACCTTACCAAGGCCCCTGCCAT
TTGGCTAGTAGTTCTGCTGAAGCTTGAGTTGCTCTTACGGCTGACATCTAAAATTTTGCTTCATGCAGCCAATTCAACAC
CCATGTGCTTCAACCT----------------------------------------------------------------
----------------------------------------TCACCCACTCGTCTTGCTATCCGGCCGTTGCCCTCTTTTG
CTTATACTGATGCTAGGGGCCAAGGACACCTCCAAGCAA-----------------------------------------
--------------------------------------------------------------------------------
------------------AACAGAGGGAGTTCCCATATTCTAGGATTCAATGAAATTGTGCATCTTGGCCGGAATGAGCA
TTCCCATCACATAGCCCTACAGAGTTAAGACAACCTCTT-------------------CGAGTGGAATAGAGGGTAAGCG
AAGATACACCTCTATGCAGCCCAATTGAAGCACGTTCCGTCGAC---------AAGCATGACACTAGTGCAAAGCTAA-G
AGATGTGTAATTAGCATGGTGGTGCTTGAGAGAACAAGAAGCAACACACAAGAATGACCAACTTAAAAGAGGGTGATGCT
TACACCAAGTTCTACAACCGGATCAACGCGAGGACAAGAATAAAAATCACATCCATAGGGTAAGCACAATCTTGATTGGG
TCATCGAGCATGAACAAGAAGAT-------------ACTTCTCCGATGCCATGGGAAAAGAGGGCTCTAGACCAAAAGAT
TTCAACAGGGAGGAGCTCAACCTTGACACACGGGACTTGCATGACCTTGAGGCCCCTTTCACCAAGGAGGAGGTGTGAGA
GGCCAT-CAACCAAATGCCAAATGACAAGGCACCCGCGGTGGATGGGTTCATCGGGCATTTTTTTGGAAGTGTTTGGGAC
ATTGT----------TCATGAGAGCCAACCATAATTTTGGTAACCTCCATGGTGCAAATCTCCAATGGTTAAACTCTGTA
AACATTGTGCTTTTACCCTAGAAAGAGG-----
>chr1D_363
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-------------------------------------AAAGATTCTTTTTTATTTGAGTAATTATG---GTTAAAGATCG
GGCGGCTCCCTCTTGCATCATGTCCATGGACCATGTCCGGACCAACATAAAAAAAAACATTTCAACGAGCTATAAGCCTG
CTTTTTTTCCCAGAAG-------AATAGCTCTTCAGCGTTCCCGTGAAAATGGCCCAAGTAGTATCAAACG---------
----CGCAAGTGTG-AACGGGCGACTGAAACCGGCGGCCCCTTTCACGATG-----------------------------
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-----------------------------------------------------------CGTGGACCGACCGTTCGTTCT
TTCTGGAACACACACAG-AAAAGAGGCAGCCCAGGACGCGCCGCCCCGCTCCCCGACCCAACGGCAGCACCCGGATCGGA
CGGCCGGGAACCTCGCGTGGGACGAAAGCTAATCGACCCCCGCCCCCGCTGCGATCCGCCGCCCACCGCCGATCCTGCGG
CCACCATTCCTGCGTCCATCCAAAGCTAACCAAACCCCCGG--CTCCCCGCAAAAAGATAAAAAAAAATCCCATT----C
CCCAAAAAAATCGCCATATAAACCCCCCACCCCATCCTCCGCCTCCACGGCCTC--------CCCCAACTCCGATTCGAA
ATACTCCTTCCCCA--GCTAGGGTTTTGCTGCCTCC------------GCCGCCGCCTCCCGCCAGCGT--CGTCCCCCC
ATGGTGAGTTCAT-C----------CCGTTCGATTCCGCGTTCATGGTTTCCGTCTGATTCCGCGTCGGATCCGCGGCTG
GGTGGGCCTGATCTGTTTTTTGGTCTGGTCTGTCGCAGGCGCTGCCGAACCAGAACACCGTCGATTACCCCAGCTTCAAG
CTCGTCATCGTCGGCGATGGCGGGACTGGTGAGCCTCCTTCTCCCCTTACTCTCGTTCGTTGTG--GTTGCGGTAGATTA
GGCCGTGATCTGTCCGATGCGCCTGCTTGTTGCCGTCGTTTCGGCGAGATCTGGCTCAGTTACCAG-TTTGCGTGGCCTC
CGGATGGAATCTGACGCCGTATTAGGAGTTGGG--GATTGCGGGGGCGATGGTTATCCGTGCCACGAAAGGGTTTCGTGA
TTCGTT-TGCCAGCGGGAATTACCTTTTGATGCTTTCCGTTTGAACGCATGGAAAACAGAGTTAGTAGTTGCGAAAGGCA
CGGAACGCATGGAAAACAGAGTTAGTAGTTGCGAAAGGGATTTAGATCAGGGGGGTCTTGATGCTTTTGCATCATATATT
TTACCAATAGGAA----AAAGTTTGTGTAGCAAGACAAGACTATGTTTGTCGGATTTGAACTTTTTTCTTATACGCAGTT
GCTCCAATAGTT-ATAGCATCTGTATGGAGATTGAAAAATTACCAGCAGATTCTATGTATTAAAAGGATTATTTGAACAG
GGGAGTGTGTGTTCTATGA---ATTATTAGATCGAATATTACTGATAGGCAAAGACGTGGTGGCATTACTGTTTATGAAA
TGTTCCATTTTTCATGCACCAGTGTAAAAGGTCTGCCTATTAGAATTGTGTTTCGGTGCAATGGAAGACTTAATATGAAG
TA-TACTTTTGCTTATAAGTGAAGAAATCCTTACCATCTAGATAATTTTGTGTCTGTACCGAATTACTTTAGTTGCATCT
ACTAGATTGGTTTCTCATGCATCATATTCTCTAATC-AAACATGAACCTACCTAACATACCATATTTCAAATTGCAATTG
TTAGTAATTTTGTGC-CTGCTCAGTCCT---TGGTTCTTTAGCTTCCTGCTTTGTCTGGTTATTATCCTTCTCCCACCAG
CGACAGCAGAGTCTCTGATACTGTTATCTGTTTGCAGGCAAAACCACTTTTGTGAAGAGGCATCTCACTGGAGAGTTTGA
GAAGAAATATGAGCGTATGTGTGGATTATTCTTAGTTTCTCTTCTGCACCTATACTGCTTGGCATGCATCATGGCTAAGA
AATTCAACATTTTTCCCCCCTTTGCAGCCACTATTGGTGTTGAAGTTCACCCATTGGATTTCACCACTAACTGTGGAAAG
ATCCGTTTCTACTGCTGGGACACTGCTGGGCAAGAGAAGTTTGGTGGCCTTAGGGATGGATACTAGTAAGTGTTTTGTTG
ATCTCTATGATTTAACTACGGCTCTGCAAT--------------------------------------------------
-----------------GGAAAATGCAAAGCTTACTGTTTCTATGTATGATTGACTCACTGCTCTTCTTTAATCATTTTG
ACAGTATCCATGGTCAGTGTGCGATAATCATGTTTGATGTCACTTCAAGGCTGACATACAAGAATGTTCCTACGTGGCAC
AGGGACTTGTGCAGGTTTGATTCTGATG---CAATCATCTCTACTTCACTGCATGTGATATTGTGACTTGGT----GTTC
TGATGTCTGGATGTTAACCTGTTGCAGGGTGTGTGAGAACATCCCCATTGTCCTGTGCGGGAACAAGGTTGATGTGAAGA
ACAGGCAGGTTAAGGCCAAGCAGGTGACATTCCACAGGAAGAAGAACCTGCAGTACTATGAAATCTCTGCCAAGAGCAAC
TACAACTTTGAGAAGCCCTTCCTTTACCTTGCAAGGAAGCTGGCTGGGTAATTGCCTTC---CCCCATTGTTTCTTTTTG
CCTGTAACCTCTCATCATCCATCTTTTTTTACTAACTAATCTTTGATGATGACAGTGATCCCAACATTCACTTCGTCGAA
GCTGTGGCCCTTAAGCCCCCGGAAGTGACCTTCGACCTGGCCATGCAGCAACAGTAAGTGACTTTAATCTGTTGTATAGT
TTCATTTATGTTCACTGGAATCGCTCTGTTTCAGTCTGAAT--TC-----------------AAACGCTGATTGCCTTTT
GATGTGACTTGTGCAGGCACGAGGCTGAGCTTGCGGCTGCAGCGGCACAGCCACTGCCTGATGACGATGACGATCTGATC
GAGTAGAGAGAGGATCATGAGTCTTGTCTGTCTTATCAATCAATACTTTGAGAGCCAGAGACTGTGCGAGTCGGTTTTAG
GTTGAAGGCTTGATTTGGAGTAGTCAAGCCGGATGTTTTTCCTGTCTGCCTTGCCTTGTCTGGTGGGCTGCAAACTGTTT
GTGTGACATTGATCTACATCATGTTGCTTGCCATGGATTTGTTGTTGGCCACCTTGATGGTTCATCAGTATTATTATGCC
TGTTGGCTCAA-TGTGTGGATCATATATTTATCTTGATCATCTGTGTGCTTGCTATGCGCATCGTTTTGGGCTAAATAGG
TTAGCTGCTGGACATC-TCAATGGCCAGGTAAGCACTCGCCACACTTTTTTTTTAAACGGAACTCGCCACACTGTCAAAA
GCAGCAAAAGGGATTTTATTTCTCTTTTTTTGAGCTGGTGA-TTTTGTTTATCTCTAGATAAACACAATTTGCGGTAGCA
CTCTTAAA----------------------AGCATATCCAATGATGTTGAACTTGCCAATATTTAAATCATAAGA-CAAT
TTAATTTCTT-ACTGGGCAAATTGAAGCCCAAAAGAGGAAGATCATTGAGAAAATCATACCTTACCAGTCT---------
--------------------------------------GGTTGACATGTAAAGGTTTGCTTCAATTTTTTTCATTATAAT
TTGCTTCACAGTCCTGTTCTAATTTGTACTAGGCAGACTTCATCGAGAAATCCGTCATAGTGTCATGCTGGGAAGTCACT
CACTCACCAATGAGGCCCTTTTGCCAATTAGTCCAAACAGTCACCCACTCATCTTGCTATCCGACCATTGCCCTCTTTTG
------CTGATGCTAGGGGCGAAAGACACCTCAAAGCAAGACTTTTGTACTTCCTCCATTCACTTTTATAAGTCGTTTCA
AACAAGTGAAATTGAGCTGTTCACTTTTATAAGTCGTTTCAAACAAGTGAAATTGAGCTGTTCTGCACAATGCACGTCTA
CAAAGCCTTATAAAAATGAACAGAGAGAGTTCTCATATTCTAGCATTCAATGAAATTGTGCACCTTGGTCGGAATGAGCA
TTCCAATCACATAGAGCCCTACCAAGCCTTGTGTTAAAAAGACTGCGCTTCACCTCTCCGAGTGGAATAGAGGGTAAGCG
AAGATACACCTCTATGCGGCCCAATTGATTATTCTCCTTTCTCGACCATGAAGAAGCATGACATTAGTGCGAAGCTAAAG
AGATGTGTAATTAGCATGGTGGTGCTTCAGAGAACAAGAAGCAACACACAAGAATGACCGACTTAAAAAACGGTGATGCT
AACACCAAGTTCTACAACGGGATCAACGCGAGGAAAAGAAG-AAAATCACATCCATAGGGTAAGCACAATCTTGGTTGGG
TCATCGAGCATGAACAAAAAGACATCATTCATACCCACTTCTCCGATGCCATGGGAAAAATA--CTCTAGACCAAA----
TTCAACTGGGAGGAGCTCAACCTTGACGTACGGGACTTGCATGACCTTGAGGCCCCTTTCACCAAGGAGGAGGTGTGAGA
GGCCATCCAACCAAATGCCAAATGAC---GCACTCACGTTGGATGAGTTCATCGGGCATTTTTT-GGAAGTGTTGGGACA
TTGTTAAGGTTGAACTCATGAGAGCCAACCATCATTTTGGTGACCTCCATGGTGCAAATCTCCAATGGTTAAACTCTGTA
AACATTGTGCTTTTGCCCCAGAAAGAGG-----
>SNPs
SSSSSSSSS-----------------------------------------S----S------------S--S--------
-----------S-------------------S-----------------------------------------S------
----S------------S---------S----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------S-----S------------------------S---SS
------------------------SS-S-SS--S--S------------SSSSSSSSSS-----------S---------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------S------------------SSS----------------------S------S--SSSS-----------
------------------------------------------S---------------S-------------------S-
--S------------------------------------------S------------------SS-SSS-S-S---S-S
---SS---------S-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------S--------------------------S----------------------------------S-----------
---------------------------------------------------------------------------S----
--------------------------------------------------------SS-----------------SS---
---------------------------S--------------------------SSSSSSSS------------------
-------------SSS-----------------S------S-SSSSSS--------------------------------
----------SSS-------------------------SS------------------------S-S----------SS-
S-----S------------SS-----------------------------------------------------------
---------------------------------S---S-S-SSS--SSSSS---SS-SS-S--SSS---S--S----SS-
----------S--S-------S-S------S----------------------SS--SSS-SS-S-S-------------
--------------S-S---------S---S-SSS----------SS---S-----------------------------
---------------------------------------------SS---------------------------------
-------------------------S---------------------------------S----S---------------
-------------SSSS------------S--------------------------------------------------
--S------------------------------S--S-----------S--S---------------------------S
----------S-----------------------------------------------------S-------S--S----
--------------------------S-----------------S--S--------------------------------
-------------S-------------------------------------------------------S-S--------
---------------------------S----------------------S---S--------S----------------
--------------------SS----S-SSS-----S-----------S-S-----------------------------
--------------------------------------------------------------------------------
-----------------------S---S----S----------S-------------------S----------------
-------------------------------------------------------------------------S------
-----------------------------------------------------S---------------------S--S-
-------------------SSSSS----S---------------S---S----S----------S----S--S-----SS
---S---S-S-SS---------------------------S--S-------------S-S-S------------------
--------------------------------------------------------------------------------
------S---------------------SSS-----------S-------S-----S--S--S----S------------
--------------------------------------------------------------------------------
-------------------------------------------------------------S------------------
-----------------------------------------------------------------------------S--
----------------------------------------------------------------------------S---
------------------------------------------------------------S---SSSSSSS-SSSSSSS-
---------S------SS------S-S-------S---S-S------S--------SS-SS--------------S----
-------S--------------------------------------------------S--S------------------
---------------S----------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------S------------------------------------------------------------
-----------S--------------------------------------------------------------------
-------------------S------------------------------------------------------------
-----------------------------------------S---SS---S------------------S----------
-----------------S--------S----------SS-SSS-------------------------------------
------------------------------------------S-----SSS-----------------------------
------------------S-------------------SSS-SSS-S-S-SS--S-SS----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------S-------------------------------------
----------------------------------------------S------------------S--------------
----------------------------------------------------------------------S---------
--------------------------------------------------------------------------S--S--
------------------------S-------------S-----------------------------------------
------------S-------------------------S---------------S-----------------------S-
-------S--------------------SSSSS
>forward_773
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------TTGACACTGGGCACTGATCC---------------------------
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---------------------------------
>reverse_2827
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------CGTTTGAGAGATTGCGGGGT----------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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---------------------------------
>forward_2775
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-----------------------------------TCGTTTCGGCGAGATCTGAG-------------------------
--------------------------------------------------------------------------------
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---------------------------------
>reverse_3940
--------------------------------------------------------------------------------
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-------------------CTGCACACACGACTGTTGTG-----------------------------------------
--------------------------------------------------------------------------------
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---------------------------------
>forward_2778
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--------------------------------------TTTCGGCGAGATCTGAGTCG----------------------
--------------------------------------------------------------------------------
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>reverse_4657
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----------------ATGATTGCCCGGTTTCAGGT--------------------------------------------
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---------------------------------
>forward_3744
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--------------------------------------------TGCACCTATACTGCTTGGCG----------------
--------------------------------------------------------------------------------
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---------------------------------
>reverse_5489
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------------------------------------------------AAGCATGTCCCAAGAAGCGA------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------
