>input_sequence_36981
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---ATGGGCAAGCTCCTCTGCGAGTCCTCCTCCGGCGGCGGCGCCGTCGCCGTCGCCGAGGCCCTCCCGCCCTCCCCCGC
CCCGGCCTCGCCGCCGCAGCTCCTCGCCTGGGCCGCCCCCGACCCCCCCGCCGGCTGGTCCGCCGTCTGGGCGCTCGACG
ACCAGCAGCGCCGCCGCCTGCTCCGGATCTGGGAGCGCGGCGTCGCCTGGAAGCCGCCCCGCCAGGGGGGCGACGGCCCG
GAG------GCCCCGCCCCCCGCCGTCGTCTTCCGCCTCGACCACGGCGGGGAGGTCGAGTCCGACGGCAACTGCCTCTT
CACCGCCGCGCGGAGGGCCGCCGCCGCCAAGGCCGAGGCGCGCGAGCTCCGGCACCGCGCCGTGCGCCGCTTCGCCGACG
TCTACGCCGCGGCCGAGGCCTCCGACAGGGCCGCGGTCGACGCCGCCGTGCGCCACCTCTACGCGCCGGATCTCAAGGCC
GGCTGGGGCGTCCACGTCGTGCAGGAGGTCAAGCTGCTCGCGCCCAAGGCCGACCGCGACGCCCTCGACGCCGCCATCCA
GGAGCTCGTCGACATCGGCATCCAAAGGTACCGTGACCGCCCCGCCAATCCCGGATCTAGTAGTCTTCTTCCTCGCGCTC
GAATCTGTTGCTACCATGCGTGCCGGGATCTCAGAAAGGCGTCGCCCTCTCCTTCAAAGACCTCGTCTTTCCCTCCGCTG
CCACGAATCACGCGGAATTCGGCTTCCTGTCTTGCGTTGATCCGATCCCCTTTGCTGTCC-AAGAAAGTTGTCTAGTCTT
TTATG---TCTATATTTACATCTTGACCTTGCGTTTCTTGATTCTTTCTTATGTTAATTCGTGTAGAAACGCCAATTGAT
GCAATTCCAATGCATCATGAAGCCGCAAGAATCGCTTCACATGGTGTCTTAGTAGTATTCTGCCCCGCATG--AATTGGT
CAACGAAGGAATCATGGTTTTACTGTTGCCACCC----------------------------------------------
TGAC-------------------------------------------------ATCCAGCCTGTTAATTATGCTGTAGCA
CATTATTTGGCACACTACCTACCATTTATGCCGCTTGCCTGGCAATGGTACAATTGCAGTACATCTCTCAGTTTACAAGT
CCTGCGCGTATACCTAGGTTTATACCTAGGTTGCCAATTTTATCACCCTAATATAAACTATATAACACAAAAATTATACG
GTTTGGAAATAGAACATCTGAATTTTATATTGGTATATTTTTTGAAATACATGACTTGTATTAGATTGGTCAAATTGACG
ACCTAGGGATACGCGCACGCCCTGTAAACTGAGAGAGGGAGTACAGAATATCATGTTGATTTGTAGTGCTAAATTAGAGT
TGCTGTACCCTGTGCAGTTGTGACAGCCCACAGAGGTTGGTCAACTGATCCTCCAAATTGTATGTGCTGATCTTCTTCAT
CGCCTTGCAGGGAACTGGCAGCCGAGACTATCTACAAGGAGAGATGTATTGCTGTAGACGATGGAGATAGTTGGGCCAAG
TACATGTCCATTTCTGGTTCGGCGGAGGATGAGCATGACATAATCACCCTGCAGTACACAGAGGAGGGCTTACTGACCAT
TGATGAGAACCGGGATGGGCGTGCGGCTGCGTTTGGCGATGATATTGCCATCGAGTGCCTCGCCACCGAGTTCAAGAGAG
AAGTTTTCGTGGTAAAGTCAATAAACTCGCTGATATGATGTGTTTATTTTTTCTCAGTTATGTGATTTCTGTCCATAGAA
CTGGCCACTGTTGTATGCAGCATTTTACATCTTGGTCTGATTGGATCTTTTATTTGTGCGGCATTGACAGGTACAAGCAC
ATGGCACCGATGCAATGGTTGATGAGGATAACTGCGTGTTCTTCCTCCCACACCTCCCTAGAGGAGAAATCTGTGATGTG
CCCATCTTTCTATTCATGAAGGGAACAGGTGCGTTGTAGATTGGCATTCTTGCTGTGCTTTCTTCTGCAAGTCAATATGT
TAAGGAATGTGTTAGCCTGTTATAGATTG-----------------------------------------------GTAT
CTATCTCAGTCAGTTGTGTTTCTGTTTCCCTGTCTAAGTAGAAACCCAAATCTTTACCTGCAGCATGGTGCGGTGCTGGT
GCAGACCATTACGAGCCATTGATCGCCACCGTCCTCCAGCATGTTACTCCAGACAAGGCAGCTGTTGTACTTTGA-----
--------------------------------------------------------------------------------
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-------------------------------------------------------
>chr3B_1_TraesCS3B01G097900
TCTCTAGTTGCGTACACTTAGAATGTACTCCCTCCGTCCCATAATATAAGAACGTTTTCTAGTTAGTAAGTAATGAACAC
ATGTCTTGGTTGAGTCACTCTACGGGCGGGGCCACGACAATTTTTTTTAGGGAAACGACAAGAAATAGTTGTCCGATGAT
GGTGGATGGCGACATCAAAACACCTAGGTGGAGCTCTCGCAACGACCCATTTCTACTAAATATTGCAAGTTAAGAAATGT
CTTTTTCTTTTAGGGAAGTTATAAGAGACGTATTGATTAAGTTGTTCTGGATCAACCTAGAGAAAAAAAAAACCTAACAT
TTTTGGTTCCTCATAAATCTTGGTCATG----------------------------ACTCATAGACATGGAATGGAATCA
AGTCCCTCCATCCTTATTCATTTCATTATAGGGAAGAAATGAACACTTTCCATATGCCAATAGCCCGCCAACGCCAGCGG
CCGGCCA-----------GCGGCAACCAACGGTAACATCGGCCGCGCGCGCTCCCGGCGGCACAGCGCACTGCTATAACC
ACTCGTCTCTTCCTCCCCCCGCCGCGACTCCACCCCACCCCACCCCCACCCCCACCTACCCCCCTCCCCCCCTCTTCAAC
GGCTACCAGAAAAACGCCGGAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNAGAGAAAGCGGGGG----GAGGAGACGACAAGCCCGAGGCAGGCGCCAGCCAGCGACCGAACCCTAGCTGCCAGCC
AGGATGGGCAAGCTCCTCTGCGAGTCCTCCTCCGGCGGCGGCGCCGTCGCCGTCGCCGAGGCCCTCCCGCCCTCCCCCGC
CCCGGCCTCGCCGCCGCAGCTCCTCGCCTGGGCCGCCCCCGACCCCCCCGCCGGCTGGTCCGCCGTCTGGGCGCTCGACG
ACCAGCAGCGCCGCCGCCTGCTCCGGATCTGGGAGCGCGGCGTCGCCTGGAAGCCGCCCCGCCAGGGGGGCGACGGCCCG
GAG------GCCCCGCCCCCCGCCGTCGTCTTCCGCCTCGACCACGGCGGGGAGGTCGAGTCCGACGGCAACTGCCTCTT
CACCGCCGCGCGGAGGGCCGCCGCCGCCAAGGCCGAGGCGCGCGAGCTCCGGCACCGCGCCGTGCGCCGCTTCGCCGACG
TCTACGCCGCGGCCGAGGCCTCCGACAGGGCCGCGGTCGACGCCGCCGTGCGCCACCTCTACGCGCCGGATCTCAAGGCC
GGCTGGGGCGTCCACGTCGTGCAGGAGGTCAAGCTGCTCGCGCCCAAGGCCGACCGCGACGCCCTCGACGCCGCCATCCA
GGAGCTCGTCGACATCGGCATCCAAAGGTACCGTGACCGCCCCGCCAATCCCGGATCTAGTAGTCTTCTTCCTCGCGCTC
GAATCTGTTGCTACCATGCGTGCCGGGATCTCAGAAAGGCGTCGCCCTCTCCTTCAAAGACCTCGTCTTTCCCTCCGCTG
CCACGAATCACGCGGAATTCGGCTTCCTGTCTTGCGTTGATCCGATCCCCTTTGCTGTCC-AAGAAAGTTGTCTAGTCTT
TTATG---TCTATATTTACATCTTGACCTTGCGTTTCTTGATTCTTTCTTATGTTAATTCGTGTAGAAACGCCAATTGAT
GCAATTCCAATGCATCATGAAGCCGCAAGAATCGCTTCACATGGTGTCTTAGTAGTATTCTGCCCCGCATG--AATTGGT
CAACGAAGGAATCATGGTTTTACTGTTGCCACCC----------------------------------------------
TGAC-------------------------------------------------ATCCAGCCTGTTAATTATGCTGTAGCA
CATTATTTGGCACACTACCTACCATTTATGCCGCTTGCCTGGCAATGGTACAATTGCAGTACATCTCTCAGTTTACAAGT
CCTGCGCGTATACCTAGGTTTATACCTAGGTTGCCAATTTTATCACCCTAATATAAACTATATAACACAAAAATTATACG
GTTTGGAAATAGAACATCTGAATTTTATATTGGTATATTTTTTGAAATACATGACTTGTATTAGATTGGTCAAATTGACG
ACCTAGGGATACGCGCACGCCCTGTAAACTGAGAGAGGGAGTACAGAATATCATGTTGATTTGTAGTGCTAAATTAGAGT
TGCTGTACCCTGTGCAGTTGTGACAGCCCACAGAGGTTGGTCAACTGATCCTCCAAATTGTATGTGCTGATCTTCTTCAT
CGCCTTGCAGGGAACTGGCAGCCGAGACTATCTACAAGGAGAGATGTATTGCTGTAGACGATGGAGATAGTTGGGCCAAG
TACATGTCCATTTCTGGTTCGGCGGAGGATGAGCATGACATAATCACCCTGCAGTACACAGAGGAGGGCTTACTGACCAT
TGATGAGAACCGGGATGGGCGTGCGGCTGCGTTTGGCGATGATATTGCCATCGAGTGCCTCGCCACCGAGTTCAAGAGAG
AAGTTTTCGTGGTAAAGTCAATAAACTCGCTGATATGATGTGTTTATTTTTTCTCAGTTATGTGATTTCTGTCCATAGAA
CTGGCCACTGTTGTATGCAGCATTTTACATCTTGGTCTGATTGGATCTTTTATTTGTGCGGCATTGACAGGTACAAGCAC
ATGGCACCGATGCAATGGTTGATGAGGATAACTGCGTGTTCTTCCTCCCACACCTCCCTAGAGGAGAAATCTGTGATGTG
CCCATCTTTCTATTCATGAAGGGAACAGGTGCGTTGTAGATTGGCATTCTTGCTGTGCTTTCTTCTGCAAGTCAATATGT
TAAGGAATGTGTTAGCCTGTTATAGATTG-----------------------------------------------GTAT
CTATCTCAGTCAGTTGTGTTTCTGTTTCCCTGTCTAAGTAGAAACCCAAATCTTTACCTGCAGCATGGTGCGGTGCTGGT
GCAGACCATTACGAGCCATTGATCGCCACCGTCCTCCAGCATGTTACTCCAGACAAGGCAGCTGTTGTACTTTGAGGAGG
GGGTTGTTGTTGTAGAGTCTTTAGTCGGCGATGCAGTCGAGCCAATTTTGTCACCGGAGCTAGAGTGCCGAATTGTGGAG
CAACATCTATGCCCAAGAG--GAGAGGATAGATGATCTGTCTAACTGTGCATTTGCAGGGTCTTGCCTGCTCCTGAAGCT
GTGTACCTTTTTTGTATGGCGTTTTTCTGTTGTTGTATGTTCGTGGTATGGTAGGTTCTGACTGCTGCTAGAGATTGAGC
GAGTGATAGAAACACCGATTCTAGCTTCTTGTTGTTGTGCGC--CCCATTGTTGGCCGGCATTTTCCATTTCATTCTTTT
TTGTGAGGGATTCACCATTTGTCGGTTGCTTGCTCGTAGGAGCGGGCATATGCTCGGACAACAGTCGGAATGGAACCGAT
TCATTGAAATTTTTTTGGTGTTGGGGTGAGGTATATTTCTACTAGCCAGCTTTCCCATGTAGCTCCCTGTTCTTGTACTA
GCTTTGTTCACAAACATGTGCACAACTGGTACTTGTAATAATGGATGATGCCAATAAGATTGTGAACCTTAATTCATCAG
GAGTGTGACTGAATTTGCAAGTCTGCTTCATCATCAAGCTGTGTTGTCGATTTGTTCTTACTGTTTCGGTGGATCGAAAC
TTGGTTACCATTCTTGATTGATGCTTTTGCTGTTGTTGTGTGCCATTCAATTACATCTGGTACAAAAAAAAATGGTGAAC
CGTG---------------ATCCAGGAGGGGTTGCAGTTACCAGCAGATTGCTAAAGGTTGTGAACTTTTT-GTGTTTTG
ATTTCACATGGCCTTATGTTGCAAGCACAAGAGCATATCCCTGATATCAGTTTGCACGTTGTAGAGTTTGACCATCATTT
TTATAGCAGTGTCACGATTCGTGCTTTTCCTCTTTCTTTCTTTTTTAAGATAAGAAAAAGCCATCGTGACTAGCTAGCTT
TATATGAGTATTAAGTTAAGCAATCATCCACAATCAATGATAAAATATAATCAGG
>chr3A_276
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------ATTGAGTTGTTTTGGATCTATCTAAAAAAGAAAGGAACCTAACAT
TTTTGGTTCCTCATAAATCTTGGTCATAACTCATAAACATGGAAAGCCCTAAAAAAACTCATAAACATGGAATGGAGTTA
AGTCCATCCATCCC-ATTCATTTCATTATAGGGAAGAAATGAACACTTTCCATATGCCAATAGCCCGCCAAC--------
---GCCA-----------GCGGCAACCAACGGTAACATCGGCCGCGCGCGCTTCCGGCGGCACAGCGCACTGCTATAACC
ACTCGTCTCTTCCTCCCCCGGCCGCGACTCCACCCCACCCCACCC-CACCCCCACCTACCCCCCTACCCCCCTCTTCAAC
GGCTACCAGAAAAACGCCGGAAAAGAAAAGAAAAAGAA------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----AGAGAAAGCGGGGGAGGAGAGGAGACGACAAGCCCGAGGCAGGCGCCAGCCAGCGACCGAACCCTAGCTGCCAGCC
AGGATGGGCAAGCTCCTCTGCGACTCCTCCTCCGGCGGCGGCGCCGTCGCCGTCGCGGAGGCGCTCCCGCCCTCCCCCGC
CCCGGCCTCGCCGCCGCAGCTCCTCGCCTGGGCCGCCCCCGAGCCCCCCGCCGGCTGGTCCGCCGTCTGGGCGCTCGACG
ACCAGCAGCGCCGCCGCCTGCTCCGGATCTGGGAGCGCGGCGTCGCCTGGAAGCCGCCCCGCCAGGGGGGCGACGGCCCG
GATGCCCCCGCCCCCGCCCCCGCCGTCGTCTTCCGCCTCGACCACGGCGGGGAGGTCGAGTCCGACGGCAACTGCCTCTT
CACCGCCGCGCGCAGGGCCGCCGCCGCCAAGGCCGAGGCGCGCGAGCTCCGGCACCGCGCCGTGCGCCGCTTCGCCGACG
TCTACGCCGCGGCCGAGGCCTCCGACAGGGCCGCGGTCGACGCCGCCGTGCGCCACCTCTACGCGCCGGATCTCAAGGCC
GGCTGGGGCGTCCACGTCGTGCAGGAGGTCAAGCTGCTCGCGCCCAAGGCCGACCGCGACGCCCTCGACGCCGCCATCCA
GGAGCTCGTCGGCATCGGCATCCAAAGGTACCGTGGCCGCCCCGCCAATCCCGGATCTAGTCTTCCTG---CCCGCGCTC
GAATCTATTGCTACCACGCGTGTCTGGATCT------------------------AAAGACACCGTCTTTCCTTG-----
----GAATCACGCGGAATTCGTCTTCCCGTCTTGCGTTGATCCGATCCCCTTCTCTGTCGAATGAAACAAGTCTAGTCTT
TTGTGCTATCTG--TTTATATTTAGACCTTGCGTTTCTTGATTCTTTCTTATGTTAATTCGCGCAAGAACACCAATTGAT
GCAATTTCAATGCGTCATGAAGCTGCGAGAATCGCCTCACATGGTGTGTTTGTATTCTAGTACCCCGCATATAAATTGGT
CAACGAAGGAATCATGGTTTTACTGTTGCCACCCTGGCATGGGCTGTAGTGGCAAAGTATGGACCTTCCAAGTAGATGAT
TGAT-------------------------------------------------ATCCAGCCTGTTAATTATGCTGTAGTA
CATTATTTGGTACTA---CTACCATTTATGCTTCTTGCCTGGCACTGGTACAACTGTAGTGCATCTCAATT---------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------AGAATATCGAGTTGATTTGTTTGGTACCATTATGCT
TCTTGCATGTT--------------------------------------------AATTATATGTGCTTATCTTCTTCAT
TGCCTTGCAGGGAACTGGCAGCTGAGACTATCTACAAGGAGAGATGTATCGCTGTAGACGATGGAGATAGTTGGGCCAAG
TACATGTCCATTTCTGGCTCTGCGGAGGATGAACATGACATAATCACCCTGCAGTACACAGAGGAGGGCTTACTGACCAT
CGATGAGAACCGGGATGGGCGTGCGGCTGCGTTTGGTGATGATATTGCCATCGAGTGCCTCGCCACCGAGTTCAAGAGAG
AAGTTTTCGTGGTAA------------------------------------------TTATGTGATTTCTGTCCATAGAA
CTTGCCACTGTTTAATGCAGCATTTTATTTGGTGATCTGATTGGATCTTTTATTTGTGCGGCATTGACAGGTGCAAGCAC
ATGGCACTGATGCAATGGTTGATGAGGATAACTGCGTGTTCTTCCTCCCACACCTCCCTAGAGGAGAAATCTGCGATGTG
CCCATCTTTCTATTCATGAAGGGAACAGGTGCGTTGTAGATTGGCAGTCTTGTTGTGCTTTCTTCTGCAAGTCATTATAT
GTCGGAACATGTTAGCCTTAGC------------------------------------------------TAAAGAATGT
CTATCTCTTCAGTTTTGTTTCTCGTTTCCCTGTCTAAGTAGAAACCCAAATATTTGCCTGCAGCATGGTGTGGTGCTGGT
GCGGACCATTACGAGCCATTGATCGCCACCGTCCTCCAGCATGTTACTCCAGACAAGGCAGCTGTTGTACTTTGAGGAAG
GGGTTGTTGTTGTAG--TCTTTAGTCGGCGATGCAGTCGAGCCAATTTTGTCACCGGAGCTAGAGTGCCGAATTGTGGAG
CAACATCTATACCCAAGAGGAGAGAGGATAGATGATCTGTCTAACTGTGCATTTGCAGGGTCTTGCCTGCTCCTGAAGCT
GTGTACCCTTTTTGTATGGCG-TTTTTTGTTGTTGTATGTTCGTGGTATGGTAGGTTCTGACTGCTGCTAGAGATTGAGC
GAGTGATAGAAACACCGATTCTAGCTTCTTGTTGTTGTGCGC--C--ATTGTTGGCCGGCATTCTCCATTTGATTC-TTT
TTGTGAGGGATTCACCATTTGGCGGTTGCTTGCTCGTAGGAGCGGGCATCTGCTCGGACA---GTCCGAATGGAACCGAT
TCATTGG-ATTTTTTTGGTGTTGGGGTGAGGTAT--CTCTTCTAGCCAGCTTTCCCATGTAGCCCCCTGTTCTTGTACTA
GATTTGTTCACAAACATGTGCACAACTGGTACTTGTAATAATGGATGATGCCAATAAGATTGTGAACCTTCATTCATCAA
GAGTGTGACTGAATTTGC-AGTCTGCTTCATCATCAAGCTGTGTTGTGGATTTGTTCTGCCTGTTTTGATGGATCGAAAC
TTGGGTACCATTCTTGATTGATGCTTTTGCTGTTGTTGTGTGCCATTCAATTACATCTGGCACAAAAAAGTGTTTTGGAA
ATGCATTTGCGCCTGCACAATCCAGGAGG-----------------GATTGTTAAAGGTTGTGAACTTTTTTGTGTTTTG
ATTTCACATGGCGGTATATTGCAACCACAAGAGCATATCCCTGCTACCAGTTTGCACGTTGTAGAGTTTGACCATCATTT
TTATAGCAGTGTCACTATTCGTGCTTTCCCTCTTT-----TTATT-----TAAGAAAAAGCCACCGTGACTTGCTAGCTT
TATACTAGTATTAAGTTAAGCAATCATCCACAATCAATGATAAAATATAATCA--
>chr3D_349
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--------------------------------------------------------ACTCATAAACATGGAATGGAATCA
AGTCCCTCCATCCC-ATTCATTTCATTATAGGGAAGAAATGAACACTTTCCATATGCCAATAGCCCGCCAAC--------
---GCCAGCGGCCAGCCGGCGGCAACCAACGGTAACATCGGCCGCGCGCGCGCCCGGCGGCACAGCGCACTGCTATAACC
ACTCGTCTCTTCCTCCCCCCGCCGCGACCCCACCCCACCCCACCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNN-------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------AACCCTAGCTGCCAGCC
AGGATGGGCAAGCTCCTCTGCGACTCCTCCCCCGGCGGCGGCGCCGTCGCCGTCGCCGAGGCCCTCCCGCCCTCCCCCGC
CCCTGCCTCGCCGCCGCAGCTCCTCGCCTGGGCCGCCCCCGAGCCCCCCGCCGGCTGGTCCGCCGTCTGGGCGCTCGACG
ACCAGCAGCGCCGCCGCCTGCTCCGGATCTGGGAGCGCGGCGTCGCCTGGAAGCCGCCCCGCCAGGGGGGCGACGGCCCG
GAGGCCCCCGCCCCCGCCCCCGCCGTCGTCTTCCGCCTCGACCACGGTGGGGAGGTCGAGTCCGACGGCAATTGCCTCTT
CACCGCCGCGCGGAGGGCCGCCGCCGCCAAGGCCGAGGCGCGCGAGCTCCGGCACCGCGCCGTGCGCCGCTTCGCCGACG
TCTACGCCGCGGCCGAGGCCTCCGACAGGGGCGCCGTCGACGCCGCCGTGCGCCACCTCTACGCGCCGGATCTCAAGGCC
GGCTGGGGCGTCCACGTCGTCCAGGAGGTCAAGCTGCTCGCGCCCAAGGCCGACCGCGACGCCCTCGACGCCGCCATCCA
GGAGCTCGTCGGCATCGGCATCCAAAGGTACCGTGGCTGCCCCGCCAATCCCGGATCTAGTCTTCCTG---CTCGCGCTC
GAATCTATTGCTACCATGCGTGTCTGGATCT------------------------AAAGACACCGTCTTTCCTTG-----
----GAATCACGCGGAATTCGTCTTCCTGTCTTGCGTTGATCCGATCCCCTTTGCTGTCGAATGAAACAAGTCTAGTCTT
TTGTG---TCTG--TTTACATTTAGACCTTGCGTTTCTTGATTCTTTCTTATGTCAATTCGCGTAAGAACACCAATTGAT
GCAATTTCAATGCGTCATGAAGCTGCAAGAATCGCCTCACATGGTGTGTTTGTATTCTAGTACCCCGC--ATAAATTGGT
CAACGAAGGAATCATGGTTTTACTGTTGCCACCC----------------------------------------------
TGGCATGGGCTGATGTAGTGGCAAAGTATGGACCTTCCAAGTAGATGATTGATATCCAGCCTGTTAATTGTGCTGTAGTA
CATTTTTTGGTACTA---CTACCATTTATGCTTCTTGCCTGGCACTGGTACAATTGTAGTACATCTCAATT---------
--------------------------------------------------------------------------------
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--------------------------------------------AGAATATCGAGTTGATTTTTTTGGTACCATTATGCT
TCTTTCATGTT--------------------------------------------AATTATATGTGCTTATCTTCTTCAT
TGCCTTGCAGGGAACTGGCAGCCGAGACTATCTACAAGGAGAGATGTATCGCTGTCGACGATGGAGATAGTTGGGCCAAG
TACATGTCCATTTCTGGTTCTGCGGAGGATGAACATGACATAATCACCCTGCAGTACACAGAGGAGGGCTTGCTGACCAT
CGATGAGAACCGGGATGGGCGCGCGGCTGCGTTTGGTGATGATATTGCCATCGAGTGCCTTGCCACCGAGTTCAAGAGAG
AAGTTTTCGTGGTAAATTCAATAAACTCGCTGATATGATGTTTTTTTTCC-TCTCATTTCTGTTATTTCTGTCAATAGAA
CTGGCCACAGTTGTATGCAGCATTTTACATGTTGATCTGATTGAATCTTTTATTTGTGCGGCATTGACAGGTGCAAGCAC
ATGGCACTGATGCAATGGTTGATGAGGATAACTGCGTGTTCTTCCTCCCTCACCTCCCTAGAGGAGAAATCTGTGATGTG
CCCATCTTTCTATTCATGAAGGGAACAGGTGCGTTGTTGGTTGGCAGTCTTGTTGTGCTTTCTTCTGCAAGTCAGCCTTA
GCTGATGAGTTTTTTTTTTTTGAGGGAAGGCCATCATGGCTAGCTTTATTAGATCAAAAAACAATTACATTAAAGAGTGT
CTATCTCTTCAGTTTTGTTTCCTGTTTCTCTGTCTAAGTAGATACCCAAATCTTTGCCTGCAGCATGGTGTGGTGCTGGT
GCGGACCATTACGAGCCATTGATCGCCACCGTCCTCCAGCATGTTACTCCAGACAAGGCAGCTGTTGTACTTTGAGGAAG
GGGTTGTTGTTGTAG--TCTTTAGTCGGCGATGCAGTCGAGCCAATTTTGTCACCGGAGCTAGAGTGCCGAATTGTGGAG
CAACATCTATGCCCAAGAG--GAGAGGATAGATGATCTGTCTAACTGTGCATTTGCAGGGTCTTGCCTGCTCCTGAAGCT
GTGTACCTTTTTTGTATGGCG-TTTTCTGTTGTTGTATGTTGGTGGTATGGTAGGTTCTGACTGCTGCTAGAGATTGAGC
GAGTGATAGAAACACCGATTCTAGCTTCTTGTTGTTGTGCGCCCC--ATTGTTGGCCGGCATTTTCCATTTGATTC-TTT
TTGTGAGGGATTCACCATTTGGCGGTTGCCTGCTCGTAGGAGCGAGCATATGCTCGGACA---GTCAGAATGGAACCGAT
TCATTG-AATTTTTTTGGTGTTGGGGTGAGGTAT--TTCTTCTAGCCAGCTTTCCCATGTAGCCCCCTGTTCTTGTACTA
GCTTTGTTCACAAACATGTGTACAACTGGTACTTGTAATAATGGATGATG------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------TGTTTTG
ATTTCACATGGCCGTATATTGCAACCACAAGAGCATATCCTTGATAGCAGTTTGCGCGTTGTGGAGTTTGACCATCATTT
TTATAGCAGTGTCACGATTTGTGCTTTCCCTCTTTCTTTCTTTTT-----TAAGAAAAAGCCATCGTGACTAGCTAGCTT
TATA------TTAAGTTAAGCAATCATCCACAATCAATGATAAAATATAAACAGG
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---S-------S------S-S---S-S--S---SS----------
---------------------------S-----------------------------------S----------------
-------------SS---------------------------------------------------------SSSSSSSS
SSS-----------------------------------------------------------------------------
---------------------------------------------S-------------------S--------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSS----------------------------------------------------------------------------
-----------------------S--------------------------------------------------------
------------------------------------------S-------------------------------------
--------------------------------------------------------------------------------
--------------SS----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------S-----------------------S-------------------------SS--S-SSSS---------
------S---------------S-S------SSSSSSSSSSSSSSSSSSSSSSSS------SS---------S-SSSSSS
SSSS-----------------S-------------------------------------S--S----SSS----------
--S--------SSS-------S-S-------------------------------------S---SS---S---------
------S------S---------S-----------S-----------S--S---S-S-SS-S--------S---------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------S-
----------S--SSSSS-------------SS-----------S-----------S----------SSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------SS----------SSS-SSSS----SSS-
-SS--S-SSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----S--------S-----------
S------------------------------------------------S------------------------------
--------------------S-----------S-----------------------------------------------
S-----------------------------------S-------------------------------------------
----------------S------------------------S---S--SSS-----S-----------------------
------------------------------S---S-------------------------------------S-------
-------S------------------------------------------------------------------------
----------------------------------------------S-----S---------------------S---S-
SSS----S----------S--SSS-SSS--------------------------------------------------S-
-------SSSSSS--SSS--S----------------------------------S--------------S---------
--S---------------------------------------------------------------------------S-
---------------SS---------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------S----------------------------------------------------------
---------------------------------------------SS------------------------S----S---
---------------------S--------------------------------------SSS---S-------------
------S---------------------------SS----S----------------------S----------------
----------------------------------------------------------------------S--------S
------------------S----------------------------S----------SS------S-S-----------
----S-------------------------------------------------------S--------SSS-SS--S-S
SSSS-------------------------SSSSSSSSSSSSSSSSS-----S----------------------------
-------------S---S------S---------------------S---------------------------------
---------------------------S-----------------SSSSS------------------------------
----SS-------------------------------------------------
>forward_41
---------------------AATGTACTCCCTCCGTCCCA---------------------------------------
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-------------------------------------------------------
>reverse_1723
--------------------------------------------------------------------------------
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------------------------------------------CGCCCTCTCCTTCAAAGACC------------------
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-------------------------------------------------------
>forward_1636
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----------------GGCATCCAAAGGTACCGTGA--------------------------------------------
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-------------------------------------------------------
>reverse_3376
--------------------------------------------------------------------------------
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---------------AGTCTTTAGTCGGCGATGCA---------------------------------------------
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-------------------------------------------------------
