>input_sequence_36957
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------------------------------------------------------------------ATG---------GC
CATGCTCGTGGCGCTCGTGCTCGCTCTCTGCGCGACGATGGCAAGAGCGGCAGTCGTGGAGCACAACTTCACTGT-AATT
TCCTGCACCCTTTTTCTTGCTTCAGGCTAGTTCAA---------------------------------------------
---------------------TC-----ATATGCCCAACCATGGCGATGTTCCA---TCATCTTTGTAACTTGTGTG---
----TGTATCGATGT----ATATATGCCAACACGTAGGTGGGCGGCATGAACATCTCTCAGCTCTGCATGGACAGCGTGA
TCTACACGGCCAACGAGCAGATGCCCGGGCCGACCATCGAGGCCACCGAAGGCGACACGGTGGTCGTCCACGTCGTGAAC
GATTCACCGTACCCACTATCACTCCACTGGTAACGATTCACTATCACATGGTTTTACTTTCGTTTGAGCGATAAGTAATA
TGAATCGAAGTGAGCACTTCTTTACGTCTCGGGGTGTAAGTCGAACTTACGGGT---CATCATCGTTGC--AGGCACGGC
ATATTTCAGCTGCTGAGCGGGTGGGCTGACGGGGCTCACATGATCACGGAGTGCCCCATCCAGCCCTCCGGCAACTTCAC
GTACCGCTTCAACATCACCGGGCAGGAGGGCACCCTGTGGTGGCACGCCCACTCCTCGCTCCTCCGCGCCACCGTCTACG
GCGCGCTCATCATAAAGCCCAGGAATGGCACGGACGGTTATCCGTACAAAGCACCATACGGCGAGATTCCAATCACACTA
GGTATAAT---ATACGCGTGTTAACGTACACAACAAACATACATGGTGCAAGTCTTCA----------------------
--------------------------------CATACAGTTCTTTCTTTGGCAGGCGAGTGGTGGAACAAGAACGTGGAC
GATGTGGAGAAAGACGCGCACCTGACCGGCCTAGGGCCGGAGGTGTCGGACGCGCTCACCATCAACGGCAAGCCGGGAGA
CCAGACCTCCTGCAGAGGTA----CAACCCAATTTACAAGTGAAAATGCTTCCATAATCGCGTCGAGCCACAGCAATATA
TGCGACTAAAAATTTGCCTTTG-ATATATTTCGAACAAAATTAGGTGCTGGTATCTTCGAAGTGGAGGTGGAGTACAACC
AGACGTACCTCCTCCGCATCATCAACGCCGCCGTCAATGTCGAGCTCTTCTTCAAGGTGTCCGGCCACAACTTCACCGTG
GTCGCCGTCGACGCGAGCTACACCGAGCCATACGCCACAGACGTCATCGTCATCGCGCCGGGCCAGACGGTGGACGCGCT
CATGACCACCTCGGCGACGCCGGAAGGCCGGTACTACATGGCGGCCAACGTGTTCGAGAGCAAGACCGTCCAGATCCGGT
TCAACAACGGCACCGTCACCGGCATCGTCACGTACAAGGGAGCGGCGAACGGCACCGCCCCCTCCATGCCGGCCATGCCA
GCCCCCACCGACGTGGTCGCCGCCGGCAGGTTCTACTGGTCTCTGAGGGGCCTCGTCCGGCCGGTCGACCCGCCGTTACC
AACGACGGTGGACCACAGCATGCTGGTGGAGTTCGGGGTGGACCAGGAGCCATGCGCGCCGGACCAGACGAGGTGCGGGG
GGTTCGCGCTGGTGGCGTTCATGAACAGGAACTCGTTCCAGTTCCCCAAGAACGCGTCGCTCCTGCAGGCGTCCTTCGAC
GGCGTCCCGGGCGTGTACACGGAGGACTTCCCGAGCTCCCCGCCGCCGCTGCCGGGGATCCGGAAGGCGACGGCGGTGAA
GAGGGTGAACCACAGCGACGTGGTGGAGGTGGTGCTGCAGAGCCGGGCGTACAGCAGCGCCCTCGGCACGGAGAACCACC
CGATCCACCTGCACGGCTTCAACTTCTTCGTGCTGGCGCAGGGGCTCGGCGCCTTCGACCCCAACGCCACGTACAACCTC
GTGAACCCGCGCGTGCGCAACACCGTCATCGTGCCCGGCGGAGGGTGGACCGTCATACGGTTCGTGGCGAACAATCCAGG
TGAGTGTCTGTG-----AACTGTTTGGTTCATATGCT----TTGATGCTAGCCGTCCATCGGACTGTGTATGTTAAGTTG
TTATTAACCTAC----CGCCATGGCTGTAGGTATGTGGTTCATGCACTGTCATTTGGACGCGCACCTGCCGTTGGGGCTG
GCAATGGTGTTCGAGGTGCTCAATGGTCCGGCGCCGAATATCCTTCCTCCGCCTCCCGAGGACTTTCCCAAGTGCTACTG
A-------------------------------------------------------------------------------
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--------------------
>chr3D_1_TraesCS3D01G358600
GCTAGGGTTGTCGATGTCGGCCGGCTTAAATAGCCGGACTTTTGCCTCGGGCGGCGTTCACATCCCCACCGAAGGAGATG
TCCGTCGGACTGCTGGGTTTTCAGGCAATTCCGTGTGGGACCGGAATGTCAGTCCGACGTGACGGACGCGCTCGGGCCTC
CCCATATCCGTCCAATATTTGATGTGCCGGTCAGTCCGGGCGTTCGAGGCCCGTTTGAGATGTCTGTCTGGGTCGGCTTT
TTTTTGACCGGTCACTAACCAGGGCGTCCACCCGGGCGTATGGAGGGGGGGGAGGGGGTTGAGACGCCCGACTGTAGATG
CTCTAAGGTGTGGCATCACGTGATAATCCCGCAACATCTTAATTAGGTGCCATGTTTTAGATACGAAC------TATGTT
CTGCGGTTCGGGTAAACCATACGACTTGTTTGTTCGGAGGCAATATAAAATGGTCATGATCAAGTCAACGCACGTATAGA
ATACATAGGGAGGTGACGGCTACTTTTGAGCATTTGAAATCGTCTTGTAATATCTCGCAAAAAGAAAAGATCGTTTTGTA
ATAAGACAAAATCTTTCTCGATATCAATCCCATTGTCCCTCGTTCTCT--GAGCCCGCTGCGCAGGGTTGACCTTGGTGC
TACGCGCCG----TTTC------TTGTAAATTTCCTGTTGAAGTAGTCTAAAACACAAATTGCAGCCGCTATCAACAAAA
TGACGGTTACTTCCGCGATTAAGCTACGTCCGACCAGGTGCAAGCCACGGTTATTACATGTCCTCGTCGCAGTCTGATTA
CATCGTTAACGCGAGCTCACACGCCAAGAGGATCATTGGATC----ATCGTCGATTGCAAGACTTGTTCCATTGCCGATT
AGTTCCGCAAACGATAAGTACGTACGTATGTGTTGATAACAAGTGGCTATATATCTCTACATATAGAAGGACGACCAAGC
TAGACAAGCCTACAGTTTTCTGGTTTGCTAATTGATCTTGC-TGCTGCTTCGG---AGTTGGGGTGATG---------GC
CATGCTCGTGGCGCTCGTGCTCGCTCTCTGCGCGACGATGGCAAGAGCGGCAGTCGTGGAGCACAACTTCACTGT-AATT
TCCTGCACCCTTTTTCTTGCTTCAGGCTAGTTCAA---------------------------------------------
---------------------TC-----ATATGCCCAACCATGGCGATGTTCCA---TCATCTTTGTAACTTGTGTG---
----TGTATCGATGT----ATATATGCCAACACGTAGGTGGGCGGCATGAACATCTCTCAGCTCTGCATGGACAGCGTGA
TCTACACGGCCAACGAGCAGATGCCCGGGCCGACCATCGAGGCCACCGAAGGCGACACGGTGGTCGTCCACGTCGTGAAC
GATTCACCGTACCCACTATCACTCCACTGGTAACGATTCACTATCACATGGTTTTACTTTCGTTTGAGCGATAAGTAATA
TGAATCGAAGTGAGCACTTCTTTACGTCTCGGGGTGTAAGTCGAACTTACGGGT---CATCATCGTTGC--AGGCACGGC
ATATTTCAGCTGCTGAGCGGGTGGGCTGACGGGGCTCACATGATCACGGAGTGCCCCATCCAGCCCTCCGGCAACTTCAC
GTACCGCTTCAACATCACCGGGCAGGAGGGCACCCTGTGGTGGCACGCCCACTCCTCGCTCCTCCGCGCCACCGTCTACG
GCGCGCTCATCATAAAGCCCAGGAATGGCACGGACGGTTATCCGTACAAAGCACCATACGGCGAGATTCCAATCACACTA
GGTATAAT---ATACGCGTGTTAACGTACACAACAAACATACATGGTGCAAGTCTTCA----------------------
--------------------------------CATACAGTTCTTTCTTTGGCAGGCGAGTGGTGGAACAAGAACGTGGAC
GATGTGGAGAAAGACGCGCACCTGACCGGCCTAGGGCCGGAGGTGTCGGACGCGCTCACCATCAACGGCAAGCCGGGAGA
CCAGACCTCCTGCAGAGGTA----CAACCCAATTTACAAGTGAAAATGCTTCCATAATCGCGTCGAGCCACAGCAATATA
TGCGACTAAAAATTTGCCTTTG-ATATATTTCGAACAAAATTAGGTGCTGGTATCTTCGAAGTGGAGGTGGAGTACAACC
AGACGTACCTCCTCCGCATCATCAACGCCGCCGTCAATGTCGAGCTCTTCTTCAAGGTGTCCGGCCACAACTTCACCGTG
GTCGCCGTCGACGCGAGCTACACCGAGCCATACGCCACAGACGTCATCGTCATCGCGCCGGGCCAGACGGTGGACGCGCT
CATGACCACCTCGGCGACGCCGGAAGGCCGGTACTACATGGCGGCCAACGTGTTCGAGAGCAAGACCGTCCAGATCCGGT
TCAACAACGGCACCGTCACCGGCATCGTCACGTACAAGGGAGCGGCGAACGGCACCGCCCCCTCCATGCCGGCCATGCCA
GCCCCCACCGACGTGGTCGCCGCCGGCAGGTTCTACTGGTCTCTGAGGGGCCTCGTCCGGCCGGTCGACCCGCCGTTACC
AACGACGGTGGACCACAGCATGCTGGTGGAGTTCGGGGTGGACCAGGAGCCATGCGCGCCGGACCAGACGAGGTGCGGGG
GGTTCGCGCTGGTGGCGTTCATGAACAGGAACTCGTTCCAGTTCCCCAAGAACGCGTCGCTCCTGCAGGCGTCCTTCGAC
GGCGTCCCGGGCGTGTACACGGAGGACTTCCCGAGCTCCCCGCCGCCGCTGCCGGGGATCCGGAAGGCGACGGCGGTGAA
GAGGGTGAACCACAGCGACGTGGTGGAGGTGGTGCTGCAGAGCCGGGCGTACAGCAGCGCCCTCGGCACGGAGAACCACC
CGATCCACCTGCACGGCTTCAACTTCTTCGTGCTGGCGCAGGGGCTCGGCGCCTTCGACCCCAACGCCACGTACAACCTC
GTGAACCCGCGCGTGCGCAACACCGTCATCGTGCCCGGCGGAGGGTGGACCGTCATACGGTTCGTGGCGAACAATCCAGG
TGAGTGTCTGTG-----AACTGTTTGGTTCATATGCT----TTGATGCTAGCCGTCCATCGGACTGTGTATGTTAAGTTG
TTATTAACCTAC----CGCCATGGCTGTAGGTATGTGGTTCATGCACTGTCATTTGGACGCGCACCTGCCGTTGGGGCTG
GCAATGGTGTTCGAGGTGCTCAATGGTCCGGCGCCGAATATCCTTCCTCCGCCTCCCGAGGACTTTCCCAAGTGCTACTG
ACGCAGCACCGATGTATTGTTTGCATGCTTGACAAGTTCGTCGACAGGGAAGTGAGATATTGTATGGGACACCTGACGTG
CTCGTATA---TACAAGTATAATGTACTGCCAGCCACGGATTTATTTCATTATCTTCTTTGCGTTCATGATTGATTTGAT
A----CTTGTTTCGAAGGTGGCTTAGTCAATTGTTCCAAGCTTTCGGTTCTGAATAAAGGTAAACAC-------------
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----------------------ATTTATGTGTACTAGTGACCACCCAAGTTTTTCTTCTTCTTTA-AAATAGCAAATGCT
ATCTATTGTTCGAAGAAATTCAGAAAAAGCCTCGA----TTTACACGAAAGTGGAGAAAGGGAAAGGACAAGAACGGATC
TAATACCCTTTCCAGCCTCACAAAGGCTTGTTCTAAAAAAC-------------AAAATCTCACAAAGGCTTCCGTGGGC
CGGCCCAACAACGAGGCGAGCAGTTCTCTCACGATGTGCCGGTTCTCCTGGCTCCTCGTTAGTTACTCAGAGGGCATTTC
CTAAACGGCGCCTGTAGCGCCCGTTTTAG-CTTACTGGTACACGGCGCACACCCCTTTCACCCCGCTGGGCCGGCCCATC
TCCT-----------GCTGAAAAAAGATGTCCCGCCAGAGGATCGAACCAGCGACATCCCTGTCGAGCAAAGCATCGCTA
ACCATCACGCCAACTCGCTTATATGTGAACTACAATCTTTTTCCTCTAT-TTCAATTCTATTCTTTCCTC--------TT
TTCCTTTTTT--------------TTCCTTTTTTCGTTTTTGTTTTCTGTTTTTCCTTTT--TTTTGTTCTTCCTAATTT
GATGTTTTTGCTTGAAATTCGTGATTTTTTTTTCTTAAAAATCAATGAACTTTTTTCAAATTCG----------------
----------------------ATGAACTTTTTT-CCAAATTCGATGAACTTTTTTC--------------------AAA
TCCGATGAATGTT-------------------TTTCCAAATCCGATGAACTTTTTTC-----------------------
--------------------AAATTCTATGAACTCTTTTTCCAATTTTGATGAACTTTT-TTCAAATTTGATTAACTTTT
TTCAAATCCGATGACCTTTT
>chr3B_314
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-------------------------------------------------------------------------GTGGATG
CTCTAAGGTGTGGCATCACATGATAATCCCGCAACATCTTAATTAGGTGCCATGTTTTAGATACGAACTATGTATATGTT
CTGCGGTTCGGGTAAACCATACGACTTGTTTGTTCGGAGGCAATATAAAATGGTCCTGATCAAGTCAACGCACCTATAGA
ATGCATAGGGAGGTGACGGCTACTTTTGAGCATTTGAAATCGTCTTGTAATATCTCGCAAAAAGAAAAGATCATTTTGTA
ATAAGACGAAATCTTTCTCGATATCAATCCA-----CCCTCATTCTTT--GAGCCCGCTACGAAGGGTTGACCTGGGTGC
TACGCGCCG----TTTCTATCTCGTGTAAATTTCCTGGTGAAGTGGTCTGGAACACAAATTGCCGCCGCTATCAACAAAA
TGACGGGTACTTACGCGATTAAGCTACGTCCGACCAGGTGCAAGCCACGGTTATTATATGTCGTCGTCGCCGTCAGATTA
CATCGTTAACGCGAGCTCACACGC-AAAAGGATCATTGGATCGATCATCGTCGGTTGCAAGACTTTTTCCGTTAACGATT
AGTTCCATAAACGATAAGTACGTACGTACGTATAGATAACATGTGGC--TATTTCTCTATATATAGAAGGACGACCAAGC
T---------TACAGTTTTGTAGTTTGCGAACTGATCTTGATTGCTGCTCAGGAGTAGTTGGGGTGATGAAGGGAGCATC
CATGCTCGTGCCGCTCGTGCTGGCTCTCTGCGCGGCCATGGCAAGCGCCGCAGTCGTGGAGCACAACTTCACTGTAAATT
TCCTGCACCCTTTCTTGGTAGTAGCATACCGTTTGCAGTTTTCACGCATAGTTCAATCACTTTTTTTAGCTGTGTAGTTC
AAAAATCGCGTATATAGATGTGCAGCATATATGCCCAGCCATGGCGATGTCTCTTGGTCATCTTTGTGCTAACTTCTGTA
CGCCTGTACCGATGTAAATATGTATGCCAACATGTAGGTGGGCGGCATGAACATCTCTCAGCTCTGCATGGACAGCGTGA
TCTACACGGCCAACGAGCAGATGCCGGGACCGACCATCGAGGCCACCGAAGGCGACACGGTGGCCGTCCACGTCGTGAAC
GATTCACCGTACCCACTATCACTCCACTGGTAACGATTCCCTACCCCATGGTTTCATGTACTTTTTTGCCACAGGATGCA
TGCTAAAATTCATCGTC----------------------------------------------CGTTGT--AGGCACGGC
ATATTTCAGCTGCTGAGCGGGTGGGCCGACGGGGCTCACATGATCACGGAGTGCCCCATCCAGCCCTCTGGCAACTTCAC
GTACCGCTTCAACATCACCGGACAGGAGGGCACCCTGTGGTGGCACGCCCACTCCTCGCTCCTCCGCGCCACCATCTACG
GCGCGCTCATCATAAAGCCGAGGAATGGCACGGATGGCTACCCGTACACAGCACCATACGGCGAGATTCCAATCACACTA
GGTACATACACGCGTTA----------ACGCAGCAAAAATACACGGTGCAAAGCATTCACATGCTTCGTTTAGCTGCGAA
CATTTGTTTGCTGATTGGCAAGGACATTTTTGCATGCAATTCTTTCTTTGGCAGGCGAGTGGTGGAACAAGAACGTGGAC
GATGTGGAGAAAGATGCCCACCTGACCGGCCTAGGGCCGGATGTGTCGGACGCCCTCACCATCAACGGCAAGCCGGGAGA
CCTGACTTCTTGCAGAGGTACAGCCGGCTGTTACTACAATTTAGAGGAGAGTCTAAATTTTACAACTGGAAG-------A
TGCGAGTAAAAATTTGCC-TTGTATATATTTTGAACCAAATTAGGAGCTGGTATCTACGAAGTGGAGGTGGAGTATAACC
AGACGTACCTCCTCCGCATCATCAACGCCGCAGTCAATGTTGAGCTCTTCTTCAAGGTGTCCGGCCACAACTTCACCGTG
GTCGCCATCGACGCGAGCTACACCGAGCCATACGCCACAGACGTCATCGTCATCGCGCCGGGCCAGACGGTGGACGCCCT
CATGACCACCTCGGCGACGCCCGGCGGCCGGTACTACATGGCGGCCAACGTGTTCGAGAGCAAGACCGTCCAGATCCGAT
TCAACAACGGTACCGTCACCGGCATCATCACGTACAAGGGAGCGGCGAACGGCACCGCCCCCTCCATGCCAGCCATGCCA
GCCCCCACAGACGTGGTGACCGCGGGCAACTTCTACTGGTCTCTGAGGGGCCTCGTCCGGCCGATCGACCCGCCGTTGCC
AACGACGGTGGACCACCAGATGCTGGTGGAGTTCGGGGTGGACCAGGCGCCGTGCGCGCCGGACCAGACGAGGTGCCAGG
GGTTCGCGCTGGTGGCGTTCATGAACAGGAACTCGTTCCAGTTCCCCAAGAACGCGTCGCTCCTGCAGGCGTCCTTCGAC
GGCGTCCCGGGCGTGTACACGGAGGACTTCCCGAGCTCGCCGCCGCTGCTGCCGGGGATCCGGAAGGCGACATCGGTGAA
GAGGGTGAACCACAGCGACGTGGTGGAGGTGGTGCTGCAGAGCCAGGCGTACAGCAGCGCCCTCGGCACGGAGAACCACC
CGATCCACCTGCACGGCTTCAACTTCTTCGTGCTGGCGCAGGGGCTGGGGCGCTTCGACCTCAACGCCACGTACAACCTC
GTGAACCCGCGCGTGCGCAACACCGTCATCGTGCCCGGCGGTGGGTGGACCGTCATCCGGTTCGTGGCGAATAACCCAGG
TGAGTGCCTGTG-----AATTGGTTGGTTCATATGTTTTGATTGATGCTAACCATCGATCGGACCGTGTATGTTAAGTTG
CTA---ACCTATCGCGCGCCATGACTGTAGGTATGTGGTTCATGCACTGTCACTTGGACGCGCACCTGCCGTTGGGGCTG
GCAATGGTGTTCGAGGTGCTCAATGGCCCGGCGCCGAATATCCTTCCTCCGCCTCCCGAGGACTTTCCGAAGTGCTACTG
AAGCAACATCTACACATTGCTTGAATGCTTGACAAGTTCGTCGATAGAGAAGTGAGATATTGTACGGGACACCTGACGTG
CCCATATGTACTACAAATATAATGTACTACCAGCCACAGATTTATTTCATCATCTTCTTTGCGTTCAGGTTTGATTTGAT
ATATACTTGTTTCGAAGGTGGGCTAGTCAATTGTTCTAAGCTTTCG-TTCTGAATAAAGCTGCAAAGTTACGGAGAAATG
GCGTTATAGCTCCTGGGAGTGCCCGCTCCCGCGCGAATAGTAAAGAATTTTTTTAGTAAATGTTTTATAAAAATCCTGTT
TTTTTTTCTGCGTGAAAGCTTCCGATCTATTCATCTTCAATTATGACAGTACAATAAACACCAAAAATAATAAAAATTAC
ATCCAGATTTGCAGATCACCTAGCGACGACTACAAGCACTGAAGCGAGCCGAAGGCGCGCCGCCATCATCGTCCCTCCCT
TGCCGGAGTCGGGCACAACTTGTTGTAGTAGACAGTCTGTTTTTTTGTAGATGTTCGTGTTAGTGTCGCAAGCATCCTAA
GAAAATCTCATGCAAAAAGGAGCAATGGTGTTTCGCCGGTGAAAAAACAAATTTAGGATGACATTTTGGGGAAACATTTG
GTGCTTATTTTGTTTTTTTGCACATGCCAAAATGTTTAATGTTTTTGCCTACAAATTTGTATGTAGCATTTGGATGTGTC
AAAGAACACATAGAATTTTGTTGGAACTTTTTTTTGGCATTTCAAAGAATATTTTCGCGCGCAGGAGCGCGCGCTCCTGG
GAGCACCAACGGATTTTCGTAAATTTATGTCTGCTAGTTACCACCCAAATTCTTATTTTTGTTTT-AAATAGCAAATGCT
ATCTATTGTTTGAAGAAATTCCGAAAAAAAAAGTCTCGCTTGACATGAAAATGGAGAAAGGGAAAGAACAAGAACGGATA
TAATACCCTTTCCAGCCTCACAAAGGCTTGTTCTAAAAAAAGGCTTCTTTAAAAAAAATCTCACAAAGGCTTCCGTGGGC
CGGCCCAACAACGAGGAGAGCAGTTCTCTCACGATATGCCGGTTCTCCTGGTTCCTGGTTA-------------------
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>chr3A_552
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-----------------------------------------------------------------------------GTA
ATAAGAAGAAATCTTTCTCGGCATCAATCCATTGCCCCCTCATTCTTTGAGAGCCTGCTACGGAGGGTTGACCTTGGAGC
TACGCCGTTTGTATTTA------GTGTAAATTTCCTTGTGAAGTAGTCTGGAACACAAATTGCAGCCGCTATCAACAAAA
TGACGGGTACTTCCGCGATTAAGCTACGTCCGACCAGGTGCAAGCCACGGTTATTATATGTCGTCGTCGCAGTCGGATTA
CATCGTTAACGCGAGCTCACACGCCAAGAGGATCATTGGATCGATGATCGTCGGTTGCAAGACTTGTTCCATTGCCGATT
AGTTCCGCAAACGATAAGTACGTACGTACGTGTAGATAACAAGTGGC--TATATCTCTATATATAGAAGGACGACCAAGC
T---------TACAGTTTTGTAGTTTGCTAACTGATCTTGCTTGCTGCTCAGG---AGTTGGGGTGATGGAGGGAGCAGC
CATGCTCGTGCCGCTCTTGCTGGCTCTCTGCGCGGCCATGGCGAGCGCCGCAGTCGTGGAGCACAACTTCACTGTAAATT
TCCTGCACCCTTTCTTGATATCAT--TATCATCTGCAGTTTTCAAGCCTTAGTTCAACCGCATATTTAGTTGTGTAGTAA
GTCGTTCCACTAGTAGCATATTC-----ATGTGCCCAACCATGGCGATGTTCCA---TC---TTTGTAACTTGTGTG---
----TGTACCGATGC----ATGTATGGCAACACGTAGGTGGGCGGCATGAACATCTCCCAGCTCTGCATGGACAGCGTGA
TCTACACGGCCAACGAGCAGATGCCCGGGCCGACCATCGAGGCCACCGAGGGCGACACGGTGGTCGTCCACGTCGTGAAT
GATTCGCCGTACCCATTATCACTCCACTGGTAACGATTCACTAGCACATGGTTTTACATCCGTTTAAGCGATAAGTAACA
TGGATCGAAGGGAGCACTTCTTTACGTTTCACGATGTACGTCGAACTTACGGGTGGCCATCATCGTTGCAAAGGCACGGC
ATATTTCAGCTGCTGAGCGGGTGGGCCGACGGGGCTCACATGATCACGGAGTGCCCCATCCAGCCCGCCGGCAACTTCAC
GTACCGCTTCAACATCACCGGGCAGGAGGGCACCCTGTGGTGGCACGCCCACTCCTCGCTCCTCCGCGCCACCGTCTACG
GCGCGCTCATCATAAAGCCCAGGAATGGCACCGACGGCTACCCTTACGCAGCACCATACGGCGAAATTCCAATCATACTA
GGTATACATACATACGCGTGTTAACGTACACTGCAAACATACATGTTGCAAGTCTTCA----------------------
--------------------------------CATGCAATTCTTTCTTTGGCAGGCGAGTGGTGGAACAAAAACGTGGAC
GACGTGGAGAAAGACGCGCACCTGACCGGCCTAGGGCCGGAGGTGTCGGACGCGCTCACCATCAACGGCAAGCCGGGAGA
CCAGACCCCCTGCAGAGGTACGTACAACCCAATTTACAAGTGAAAATGCTTCCATAATCGCGTCGAATCACAGCAATATA
TGCGACTGAAAATTTGCCTTTGTGTATATTTTGAACAAAACTAGGTGCTGGTATCTTCGAAGTGGAGGTGGAGTACAACC
AGACGTACCTCCTCCGCATCATCAACGCCGCAGTCAATGTCGAGCTCTTCTTCAAGGTGGCCGGCCACAACTTCACCGTG
GTCGCCATCGACGCGAGCTACACCGAGCCGTACGCCACCGACGTCATCGTCATCGCGCCGGGCCAGACGGTGGACGCGCT
CATGGCCACCTCGGCGGCGCCGGGCGGCCGGTACTACATGGCGGCCAACGTGCTCGAGAGCAAGACCGTCCAGATCCGGT
TCAACAACGGCACCGTCACCGGCATCGTGACGTACACGGGAGCGGCCAACGGCACGGCCCCCTCCATGCCGGCCATGCCC
GCCCCCACCGACGTGGTCACCGCCGGCAGGTTCTACTGGTCTCTGAGGGGCCTCGTCCGGCCGGTCGACCCGCCGTTGCC
AACGACGGTGGACCACAGCATGCTGGTGGAGTTCGGGGTGGACCAGGCGCCGTGCGCGTCGGACCAGACGAGGTGCGGGG
GGTTCGCGCTGGTTGCGTTCATGAACAGGAACTCGTTCCAGTTCCCGAGGAACGCGTCGCTCCTGCAGGCGTCCTTCGAC
GGCGTCCCGGGCGTGTACACGGAGGACTTCCCGAGCTCCCCGCCGCCGCTGCCGGGGATCCGGAAGGCCACGTCGGTGAA
GAGGCTCAACTACAGCGACGTGGTGGAGGTGGTGCTGCAGAGTGCAGCGTACAGCAGCGCCCTCGGCACGGAGAACCACC
CGATCCACCTGCACGGCTTCAACTTCTTCGTGCTCGCGCAGGGGCTGGGGCGCTTCGACCCCAACGCCACGTTCAACCTC
GTGAACCCGCGCGTGCGCAACACCGTCATCGTGCCCGGCGGCGGGTGGACCGTCATACGGTTCGTGGCCAACAATCCAGG
TGAGTTTATGTGAAATTAGTTGTCTGTTTCATATGCT----TTGATGCTAGCC-----TCGGACTGTGTATGTTAAGTTG
TTA---ACCTAT----CGCCATGGCTGTAGGTATGTGGTTCATGCACTGTCACTTGGACGCGCACCTGCCGTTGGGGCTG
GCAATGGTGTTCGAGGTGCTCAATGGTGCGGCCCCGAATATCCTTCCTCCGCCTCCCGAGGACTTTCCCAAGTGCTACTG
AAGCAACATCTACACA--------ATGCTTGACAAGTTCGTCGACAGAGAAGTGAGATATTGTATGGGACACCTGACGTG
CCCATATGTACCACAAGTATAATGTACTACCAGACACGGATTTATTTCATTATCTTCTTTGCGTTCATGTTTGATTTGAT
A----CTTGTTTC-AAGGTGGCTTAGTCAATTGTTCTAAGCTTTCGGTTCTGAATAAAGCTACAAAATTATGTCTACTGC
G-------------------------------------------------------------------------------
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----------------------------------TAGTCACCACCCAAGTTTTTCCTCTTCTTTAAAAATAGCAAATGCT
ATCTATTGTTCGAAGAAATTTAGAACAAGCCTTTGA----------GAAAATGGAGAAGGGGGGAGGACAAGAACGGATC
TTATACCCTTTCCAGCCTTACAAAGGCTT---------------------------------------------------
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>chr7D_3651
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-----------------------------------------------------------------------GGGCATTTC
CTAAACGGCGCCTGTAGCGCCCGTTTTAGGCCTACTGGTACACGGCGCACACCCCTTTCACCCTGCTGGGCCGGCCCATC
TCCTTTGTCCTAATCGCTAAAAAAAGATGCCACGGAATAGGTTCGAACCAGCGACATCCCTGTTGAGTAAAGCATCGCTA
ACCATCACGCCAACTTGCTTATATGTGAACTACAATCTTTTTCCTCTAT-TCC-ATTCTATTCTTTCCTC--------TT
TTCCTTTTTT--------------T-CCTTTTTTGG-TTTTGTTTTCTGTTTTTCCTTTTTTTTTTGTTCTTCCTAGTTT
GATGTTTTTGCTTGAAATTCGTTA-TTT-TTTTCTTAAAAATCACTGAACTTTTCTCAAATTCG----------------
----------------------ATGAACTCTTTT-CCAAATTCGATGAACTTTTTTA--------------------AAA
TACGATGAACGTT-------------------TTTCCAAATCCGATGAACTTTTTTC-----------------------
--------------------AAATTCTATGAACTCCTTTTCCAATTTTGATGAATTTTTTTTCAAATTTGATGAACTTTT
TTAAAATCCGATGACCTTTT
>chr5D_3652
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------------------------------------------------------------------------GGCATTTC
CTAAACGGCGCCTGTAGCGCCCGTTTTAGGCTTACTGGTACACGTCGCACACCCCTTTCACCCCGCTGGGCCGGCCCATC
TCCTTTTTCCTAAGCGCTAAAAAAACATGTCCCGGCAGAGGATCAAACCAGCGACATCCCTGTCGAGCAAAGCATCGCTA
ACCATCACGCCAACTCGCTTATATGTGAACTACAATCTTTTTCCTCTATTTCC-ATTCTATTCTTTCCTC--------TT
TTCCTTTTTT--------------T-CCTTTTTTCGTTTTTGTTTTCTGTTTTTCCTTTT--TTTTGTTCTTCCTAGTTT
GATGTTTTTGCTTGAAATTCGTGATTTT-TTTTCTTAAAAATCAACGAACTTTTTTCAAATCCG----------------
----------------------ATGAACTCTTTTTCCAATTTCGATGAACTTTTTTC--------------------AAA
TTTGATGAACTTTTTTCAAATCCGATGACCTCTTTCCAAATCCGATAAACTTTTTTC-----------------------
--------------------AAATTTGATGAACTC-TTTTCCAAATCAGATGAAC-TTTTTTCAAATTTGATGAACTTTT
--------------------
>chr2A_3652
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------------------------------------------------------------------------GGCATTTC
CTAAACGGCGCCTGTAGCGCCCGTTTTAGGCTTACTGGTACACGGCGCACACCCATTTCACCCCGTTGGGCCGGCCCATC
TTCTTTTTCCTAAGAAATAAAAAAGGATGTCCTGGGAGAGAATCGAACCAGCGACATCCCTGTCGAGCAAAGCATGGCCA
ACCATCACACCAACTTGCTTATATGTAAACTACAATCTTTTCCCTCTATTTTC-ATTCCATTCTTTCCTCTTTTCCTTTT
TTCCTTTTTT--------------T-CCTTTTTTCGTTTTTGTTTTTGTTTTCCC----TTTTTTTATTCTTCCTAATTT
GACGTTTTTGCTTGAAATCCGTGA-TTT-TTTTCTTAAAAATCAATGAAATTTTTTCAAATTTGATGAATTTTTTTCAAA
TTCGATGAACTTTTCAAATTCTATGAACTCTTTTTCCAATTTCTATGAACTTTTTTG-----------------------
-----------------AAATCCGATGACCTTTTTCCAAACCCGATAAACTTTTTTC-----------------------
--------------------AAATTTGATGAACTC-TTTTCCAAATTCGATGAAC-TCTTTT------------------
--------------------
>chr4A_3657
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-----------------------------------------------------------------------------TTC
CTATTCGGCGCCTTATGCGCCCGAATTAGGCTTATCGGTACACGGCGCACACCCCTTTCACCCCGCTGGGCCGGCCCATC
TCCTTTTTCCTAAGCGCTAAAAATTG-TGTCCCGGCATAGGATCAAACCTGCGTCCTCCCTATTGAGTAACGCATCGATA
ACCATCACGCCAACTTGCTGATCTGCGAACTACCATCTT-TTCATCTATTTCT-TATCTATTCTTTCCTCTTTTCCTCTT
TTCCTCTTTTCCTTTTCTCTTTTCT-CCTTTTTTCTTTTTCTTTTCTGTTTTTCC----TTTTTTTGTTCTTCCTAGTTT
GACGTTTTTGCTTGAAATTTGTGA-ATT-TTTCT-----------------------AAAATCA----------------
----------------------ATGAACTCTTTT-CCAAATTCGATGAACTTTTTTCAACTTCGATGAACTTTTTCCAAA
TCCGATGAACTTT-------------------TTTCCAAATCCGATGAAAATTTTCCAATTCGATGAACTCTTTTTTTCA
AATCCGATGAACTCTTGTTGAAATACGATGAACTC-TTTTCCAAATTCTATGAAC-TTTT--------------------
--------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--S----
-------------------S------------------------------------------------------------
-------------------------------------------------------S-----------------S------
--S---------------------------------------------------------------------S-------
-------S----------------------SS-SSS-----S----S------------S--S-----------------
-----------------------S-------------S-----------SS-----------------------------
------S-------------------------------------------------S-----S-----------S-----
-----------------------------------------------------S--------------------------
----------------------------S----S-------------SS----------S--------------------
-SSSSSSSSS---------S-S---------S-----------------SS-----------------------------
----------S----------S------------S-S--------S--S-------------------------------
-------------S-SSSSS--SSSSSSSSS--SS---------------------------------------------
--------------------------------------------------------------------------------
--------S------------S----------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------S-------------S-S-----S------------S-
--S-------S----------------S--SS-S----S-----------------------------------------
--------------------------S-----------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------S--S-------S-------------------------------
------SS------------------------S-----------------------------------------------
-----------------------------------S--S-----------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------SS------------
-------------------------------S------------------------------------------------
-------------------------------S------------------------------------------------
------S-------------------------------------------------------------------------
-----------------------SS-------------------------------------------------------
--------------------------------------------------------------------------------
------------------S----------------------------------------------------------S--
-----------------------------------------------S---S----------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------S-------
--------------------------------------------S-----------------------------------
----------------------------------------------S--SSS----------------------------
-----------------------------------------S--------------------------------------
-------------------S---------------------------------S--S-----------------------
---SSS-----S----------------------------------------S---------------------------
--------------------------------------------------------------------------------
-S---S--S-S-SSS----S---S-----------------------S--------------------------------
-S-S---S--------------------S----------------------------------------S----------
------------------------------------S----------------------S--S-S-S-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------S-S-----S-----------------------------------------
--------------------------------SSS------S---S----S-----------------------------
----------------------------------------S---------------------------------------
----------------S------------------S---------------S----S----SSSSSSSSSS---------
--------------------------------------------------------------------------------
------------------S---------------S---------------------------------------------
-----------------------------------------------------S--------------------------
-------------------------S------------------------------------------------------
----------------------------S---------------------------------------------------
-----------------------------S--------------------------------------------------
---------S----------------------------------------------------------------------
-----------------------------------S------------------------------------S-------
--S-----------------
>forward_226
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----------------------------------------------AGGCCCGTTTGAGATGTCTG--------------
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--------------------
>reverse_1809
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------------------------------------------------AAGCACCATACGGCGAGATT------------
--------------------------------------------------------------------------------
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--------------------
>forward_241
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-------------------------------------------------------------GTCTGTCTGGGTCGGCTTT
T-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------
>reverse_1959
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--------------------------------------GTTCTTTCTTTGGCAGGCGA----------------------
--------------------------------------------------------------------------------
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--------------------
>forward_1801
--------------------------------------------------------------------------------
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---------------------GGAATGGCACGGACGGTTAT---------------------------------------
--------------------------------------------------------------------------------
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--------------------
>reverse_3362
--------------------------------------------------------------------------------
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-CGCAGCACCGATGTATTGTT-----------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------
