>input_sequence_36935
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--------------------------------------------------ATGTCGCGGCTGCACGCTCTGGG-CTCTGG
CGTTGGAGGAA----AAAAGCCGTCCTATTTAAGCACGCCCGGCCGCCGCACTCTGACCGCCC-CGCTCACACACACTCG
CTCCCTCTCTCTCTCTCGCTCGCTAGCTCTCGGTGCCAGACAA-------GCGAGTGACGCGGCTCATCATACCGAGGGA
GGCCGTTGCTGCTGCTGCACCATGGAGACAGCGCAGGAAAGAGAGCTGCTGCA---GCTGC------AGCTGCAGGGGTG
GCCTTTCCACGCCATGCCGCCCAGCTTCGACGCCGGCAACGGCGCCTACAGCGGCA---------GCGGCAGCAGCAGCA
TGAGCAGCGACGTCGGCGGCGGCGACTCCTTCCTGCTCGGGTGGGAGCAGCCGTTCGGCGGCTGCTTCGGCCTCGCCGAC
GCGCAACTCCACGACCTCTTCCCCCTCTGTACGTCGTGCGCGCGCC-----GGCATCATGCCCGTGCTCTGTTTTCCTCT
TCGGCAGCTCCGGCAGAGAATTGAACTCGCCGTTTCTTCGACTGCAGGCACGATGGAGCCGCTCGCGTTGTCGCCGGCCG
CGACGTCCACGGCGGCGGACCTCCCGTCGGAGCAGCAGGTCCCGGCGCCGGCGGCAATGCCCAACGGGGAGCTCGGCGAC
CTCCTGCTGGTACACACACGCTGCCCGGCGAAGCAACCTACTATCCTTATCTTTCGCGTCCGAATTAACTA---CGGCAG
TTTCTTGCGAGATTTCCTCGGTCGTGTTAAAATCGTCGCTTTCTCTCATTGTTTCCTCTCGGCAGAATTTCTGGGACGCC
GGTGATGCGAGAGAGCGGCCGGTCGCAATCAATTCGGGCTGCGTGCCACCGCAGC---ACGAGAAGAGCAGCCAGAGCAG
CGCTGCCACCGCCACGAACTCTTTCCTCTGTAAGCAAAGTCCGTCCCTCCCTCT------------CTCAGACTCCATTG
ATCGGCTTCAGCTCTCGGTAGGCCTGTGTTTTTTCCTC----TAGGTCTCTGCCCCGGTCCTTGGCACATCACCAAGGAG
GCAAGGACAAAGCACAAAATCGTAGAGTTCGCATTTAACTATGGAAGCTTGTCAATGCCATGCGTTCAAAAA-CGCCATG
TGGGGCCGGGGTGGGTGG-GTGGGACCCGCCCAAGATTAGCAGCGCCTAATTGTCATGGCC-TGATGACCCTATGATTTG
CGCATGGTCGCTAAGTAATATA----TACTCCAGTACTATATCGCGGTACGGTA-----GGATTGCACC---ATAATAGT
ATTGCAATGTGCATGTTATAATA-----GTGTGGACTTGTTAGTG--AGCACGTAGAGACAGGCGCTTCTTTTCAAGTAA
AGACAGATCTGGGTGTTGCATGTTTAGATGGTAGCAAAGATTCTAATCTTGTGCGGGACTGCTCCTGCCAAAGTCACACC
TTTTACGTGATCACTTCATTATTTTTAAGGCACACTGGGTATGTGAATTGAATGATTATTAATCGGTTGATGATCGCTGC
CGCAGATGATGAGGACGATCTTTTGGGCTCCATTTTCTCCAAGAGGCCCACCCTGGCAGAAGAACCACCCGTGCTCTTCC
TCGCCCCGGCGGAGGCGGAGCCCCTCCCCAGCACCTCCTCCTCCTCCAGCTGCCACGCGGACCCACATGCCAGCGACGCC
GGCGGGGCCCGGGCTCAGGACA------CCACCACCAAGCCAAGTGGCGCGCGGGCCCCGCCTCTCCCTCGCTGCTCCTC
CTCGTCGTTGAAACGGGCGACACCAGAAGGTGCTCTCTCGACCTCGACGCGACACGCTTCACAGTCACCTCCACCCACTC
TCAAGAACTGTCTAATCACATAATCTAAGGAGTAATTAACTTTGACTGGCGTC-GTGTCTGGCAGCAGCATCGGAGTCG-
-----GCGGAGGCGGAGTGCAGCCAGAGCGGCGGCAAGCGGCGGAAGGTGTCGGCG---AGCGTGCTGTGCCCGTTCGCC
GTGCTGAAGCCCGACGGGCTGGACGGCGGCGCGACGCTGGCGGACATCAACGCGCGCATCCTCATGCGGCCGGCGCGGCC
CGTGCGGCACCCCGTCGGCGAGTACGCGTGCGCGCCGCGCGTGCTGGCGGCCGACGCGCCGGGCATCTCCGGCAGGGCCG
TCTCGGGGTTCACGAGGCTGCACACCCCCGGCCGCGGCACCATTACCATCATGAGGACGCGAGGCTAA------------
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>chr5B_1_TraesCS5B01G231900
TGTGCTAGATGTTTTTAAGTCTCTTGTGTATGAATTGCCATGTCAGTAATCTTGTGATGATACTAACCTGGATTAAGATT
AAACAAAAGCTGCCTAATTTCCTAACAATACATGTATCCGTGTAAGAAATATATGATTTTGGAGCTTTTAACTAGCATTT
TTTTTATTTTAGGAAAATGCCGGGCTCCAGTAGCCAAAACATCGCACTCGTGTTTGGGTGCAAGTATTCTGGCTCGTGCC
TTTGTGCATCTCCAAGCAGAGACCAGGACAGGTGC--------TACAACCCAATTGCCGTCACCCTCTGACCAGTGAGAT
CAC-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--CGAACTAGCAGCCACCTGCGTGGCTTTGACCTC-C-TGTAACAGACGCGCGCAGACCTGCAATCTGCTTTAACCAT--
-TCACAATAATAAACTCAAACA--TTTTGCACACTTTGAGGCAAAAATACTTACT----------TAAAATAACAGTGAC
ACGTGATAAGCGAAGGCGTCAAAGACTTAAAGCCGACGGCTAAACAAAGC-----------ACAAAGCCGTCG-------
---TAA----------TTCAGAACCCTCGCCGACA-----TATTTCGAATTGCCGCAGCCTGTGGAGGCGATTCCCGGGA
ACAAAACGATCGTATCGGCAGGCAAAACAAAAGCAGGTGA-GGATCGAAAGAAAGCGAAAGAGAAGATTACAACGGGAGC
AGTAAAGAAAGCGGATCGAGGAAGAAGC-----------TAACGTACATCGCCCAGCCAAAGGCCAAAGCGGCGGCACGT
AGAGGAAGGCA----GCGAGCGAATCACGAGGAAAGCAAACCGGGAGATAGAGAGAGAGCAGT-----CAGCCAACCACC
CCTATCTTTTGCTTTCGTTGCTTCGTTTGGACTTTGGTACTACGTACGTA---------CTCTGCTAACTGACTTTGGCC
GCGACTGTCACTGGACTGACCCCGGCGAGCGAGGTCGCCCCAAGGGAAGGAAATAAAACAAGTGACGCATTGGCCAACTG
GTGTATGTACACAGGGGGCGCGTTACGGGGCGGCGGTGGACTTGGCATGCATGTCGCGGCTGCACGCTCTGGG-CTCTGG
CGTTGGAGGAA----AAAAGCCGTCCTATTTAAGCACGCCCGGCCGCCGCACTCTGACCGCCC-CGCTCACACACACTCG
CTCCCTCTCTCTCTCTCGCTCGCTAGCTCTCGGTGCCAGACAA-------GCGAGTGACGCGGCTCATCATACCGAGGGA
GGCCGTTGCTGCTGCTGCACCATGGAGACAGCGCAGGAAAGAGAGCTGCTGCA---GCTGC------AGCTGCAGGGGTG
GCCTTTCCACGCCATGCCGCCCAGCTTCGACGCCGGCAACGGCGCCTACAGCGGCA---------GCGGCAGCAGCAGCA
TGAGCAGCGACGTCGGCGGCGGCGACTCCTTCCTGCTCGGGTGGGAGCAGCCGTTCGGCGGCTGCTTCGGCCTCGCCGAC
GCGCAACTCCACGACCTCTTCCCCCTCTGTACGTCGTGCGCGCGCC-----GGCATCATGCCCGTGCTCTGTTTTCCTCT
TCGGCAGCTCCGGCAGAGAATTGAACTCGCCGTTTCTTCGACTGCAGGCACGATGGAGCCGCTCGCGTTGTCGCCGGCCG
CGACGTCCACGGCGGCGGACCTCCCGTCGGAGCAGCAGGTCCCGGCGCCGGCGGCAATGCCCAACGGGGAGCTCGGCGAC
CTCCTGCTGGTACACACACGCTGCCCGGCGAAGCAACCTACTATCCTTATCTTTCGCGTCCGAATTAACTA---CGGCAG
TTTCTTGCGAGATTTCCTCGGTCGTGTTAAAATCGTCGCTTTCTCTCATTGTTTCCTCTCGGCAGAATTTCTGGGACGCC
GGTGATGCGAGAGAGCGGCCGGTCGCAATCAATTCGGGCTGCGTGCCACCGCAGC---ACGAGAAGAGCAGCCAGAGCAG
CGCTGCCACCGCCACGAACTCTTTCCTCTGTAAGCAAAGTCCGTCCCTCCCTCT------------CTCAGACTCCATTG
ATCGGCTTCAGCTCTCGGTAGGCCTGTGTTTTTTCCTC----TAGGTCTCTGCCCCGGTCCTTGGCACATCACCAAGGAG
GCAAGGACAAAGCACAAAATCGTAGAGTTCGCATTTAACTATGGAAGCTTGTCAATGCCATGCGTTCAAAAA-CGCCATG
TGGGGCCGGGGTGGGTGG-GTGGGACCCGCCCAAGATTAGCAGCGCCTAATTGTCATGGCC-TGATGACCCTATGATTTG
CGCATGGTCGCTAAGTAATATA----TACTCCAGTACTATATCGCGGTACGGTA-----GGATTGCACC---ATAATAGT
ATTGCAATGTGCATGTTATAATA-----GTGTGGACTTGTTAGTG--AGCACGTAGAGACAGGCGCTTCTTTTCAAGTAA
AGACAGATCTGGGTGTTGCATGTTTAGATGGTAGCAAAGATTCTAATCTTGTGCGGGACTGCTCCTGCCAAAGTCACACC
TTTTACGTGATCACTTCATTATTTTTAAGGCACACTGGGTATGTGAATTGAATGATTATTAATCGGTTGATGATCGCTGC
CGCAGATGATGAGGACGATCTTTTGGGCTCCATTTTCTCCAAGAGGCCCACCCTGGCAGAAGAACCACCCGTGCTCTTCC
TCGCCCCGGCGGAGGCGGAGCCCCTCCCCAGCACCTCCTCCTCCTCCAGCTGCCACGCGGACCCACATGCCAGCGACGCC
GGCGGGGCCCGGGCTCAGGACA------CCACCACCAAGCCAAGTGGCGCGCGGGCCCCGCCTCTCCCTCGCTGCTCCTC
CTCGTCGTTGAAACGGGCGACACCAGAAGGTGCTCTCTCGACCTCGACGCGACACGCTTCACAGTCACCTCCACCCACTC
TCAAGAACTGTCTAATCACATAATCTAAGGAGTAATTAACTTTGACTGGCGTC-GTGTCTGGCAGCAGCATCGGAGTCG-
-----GCGGAGGCGGAGTGCAGCCAGAGCGGCGGCAAGCGGCGGAAGGTGTCGGCG---AGCGTGCTGTGCCCGTTCGCC
GTGCTGAAGCCCGACGGGCTGGACGGCGGCGCGACGCTGGCGGACATCAACGCGCGCATCCTCATGCGGCCGGCGCGGCC
CGTGCGGCACCCCGTCGGCGAGTACGCGTGCGCGCCGCGCGTGCTGGCGGCCGACGCGCCGGGCATCTCCGGCAGGGCCG
TCTCGGGGTTCACGAGGCTGCACACCCCCGGCCGCGGCACCATTACCATCATGAGGACGCGAGGCTAATGCATCCATCAT
TGCAG---GCCATGTCTGCCTGCTGCGCCCATGGACGACGA---TGCATGATGATGGCGTACTCCGTGTAGATTAGCCCG
GCTCAATCA----GTGCATGGCTAGCTAGATAGACGCTCGATCGCTAGCCAGCAGCACGTAGCAGTACTCCCGATCCCGA
GTTCCGATGCCGTGTAATTATATGCTCGATTATTACATAAG----GAGTGGGTGAGTGAATGAATAAA-ATCCTTCCATT
TCTCTTCTCCGGATCTCGTTTTTCATCTT----CTTCTCGGATGCTCTGATAGCGATAGCGAAGGTTTCCTTGGAT----
----CGTCCGTCGCCGTTGCAAGGAACAAAGCCCGGCTGCTGG---CCCCTGTCCTTGTGCTCCTGGTAGCCAAGCAGGC
TGTG----TTTACGGCCGCATACATACAACCCCGAAAAGCTGAAAGCAACTGCCTTTCCTTTTGTCTGCAAGGCGTGGGC
CCGCT---CCTTAATTCGAGCTGCCTCCATG----GCTCTTTGCATGAGATCTTTTTTT---CTTTTTGCAAAAGAATGG
ACTTGACTTGAGCATAC---ATTGTTAATCACCACTCACTGCAAAGCCTTCCTCTGGAATGGCTTCTTTCTGTTTGTTTA
AAACA---------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------AAACGCTGTCCGGCAAAGAGAATATACGAA-GGATAAAGACGGTGGT
AGAGCACGGCAGGATAAAAACTACTTCCTTCATTCCACAATGTAGTGCCTATACATTTTTATGAAAGTCAAACTTTATCA
ACTTTGACCAAGTGTATAGGGAAATTGTCTACATCTACAATACCAAACATATACATTTTGAAAATATAACTCACGATTTA
TCCAATGATGTGCATTTGGTATTCCAGACGTACCTACTTTTTTATATAAACATGGCCAAAGTTTATAATGTTTGACTTCT
GTAAAAATCTATAGGCACTACATTATAAAAGCGGAGGGAGTACCAAAGTAAAAAAGATTAAGAAATAAAGAAAGAC-AGT
CGAGAGGATTTGATTTGAGGAAACG
>chr5D_1
TGTGCTAGATGTTGTTAAATCTCTTGTGTATGATTTGCCATGTCAGCAATCTTGTGATGATACTAACCTGGATTAAGATG
AAACAAAAGCTGCCTAATTTCCTAACAGTACATGTATTCGTGTAAGAAATATATGTTTTTGAAGCTTTTAACTAGCC-TT
TTTTTATTTTAGGAAAATGCCGGGCTCCAGTAGCCAAAACGCTGCACTCGTCTTTGGATGCAAGTATTCTGGCTCGTGCC
TTTGTGCATCTCCAAGCAGAGGCCAGGACAGGTGC--------TACAACCCAATTGCCGTCACCCTCTGACCAGTGAGAT
CAC-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--CGAACTAGCAGCTACCCGCGCAGCTTTGACCTC-CATGTAACAGACGCACGCAGACCTGCCATCTGCTT--ACCAT--
-TCACAATAACAAACTCAAGACATTTTTGCACACTTTGAGGCAACAA-----AAAATAACACAAGTAAAATAGCAGCGAC
ACGTGATAAGGGAAGACGTCAAAGGCTTAAAGCCGACGGCCAAACAAAGCGAGCAGCGAGCACAAAGCCGTCCGTCGTCC
GTCGTAGCAGCACTGGTTCAGAGCCCTCGCCGACATACTGTATTTCGAATTGCCGCAGCCTGCGGAGGCGATTCCCGGGA
ACAAACCGATCGTATCGGCAGGCAAAACAAAAGCAGGTGAGGGATCGAAAGAAAGCGAAAGAGAAGATTACAACGGGAGC
AGTAAAGAAAGCGGATCGAGGAAGAAGGGAAGTGTAGCGTAGCGTACATCGGCCAGCCAAAGGCCAAAGCGGCGGCACGT
AGAGGAAGGCA----GCGAGCGAATCACGAGGAAAGCAAGCCGGGAGATAGAGATTGAGAGAGAGCAGC--CCAACCACC
CCTATCTTTTGCTTTCGTTGCTTCGTTTGGACTTTGGTACTACGTA-------------CTCTGCTAACTGACTTTGGCC
GCGACTGTCACTGGACTGAC---------CGAGGTCGCCCCAAGGGAAAGAAATAAAACAAGTGACGCAGCGGCCAACTG
GTGTACCTCTAGAGGTGGTGCGCTACGGGGCAGCGGTGGACTCGGCATGCATGTCGCGGCTGCACGCTCT-GG-CTCTGG
CGTTGGAGGAA----AAAAGCCGTCCTATTTAAGCACGCCCGGCCGCCGCACTCTGACCGCCCGCTCACACACACACTCG
CTCTCTCTCTC--------------GCTCTCGGTGCCACACAA-------GCGAGTGACAAGGCTCATCATACCGAGGGA
GCCCGTTGCCGCGGCTGCGCCATGGAGACAGCGCAGGAAAGAGAGCTGCCGCA---GCTGCCGCTGCAGCTGCAGGGGTG
GCCTTTCCACGCCATGCCGCCCAGCTTCGACGCCGGCAGCG---------GCGCCTACAGCAGCGGCGGCAGCAGCAGCA
TGAGCAGCGAT---------------TCCTTCCTGCTCGGGTGGGAGCCGCCGTTCGGCGGCTGCTTCGGCCTCGCCGAC
GCGCAGCTCCACGACCTCTTCCCCCTCTGTACGTCGTGCGCGCCCC-----GGCATCATGCCCGCGCTCTGTTTTCCTCT
TCGGCAGCGCCGGCGGAGAATTGAACTCGCCGTTTCTTCGACTGCAGGCATGATGGAGCCGCTCCCGCTGTCGCCGGCCG
CGACGTCCACGGCGGCGGACCTCCCATCGGAGCAGCAGGTCCCGGCGCCGGCGGCAATGTCCAACGGGGAGCTCGGCGAC
CTCCTGCTGGTACGTACACAATGCCC----------------ATCCTTATCTTTCGCGTCCGAATTAACTA---GGGCAG
TTTCTTGCGAGATTTCCTCGGCCGTGTTAAAACCGTCGCTTTCTCTCATTGTTCCCTCTCGGCAGAATTTCTGGGACGCC
GGTGATGCCAGCGACCGGCCGGTCGCAATCAATTCAGGCTGCGTGGCACCGCAGC---ACGAGAAGAGCAGCCAGAGCAG
CGCTGCCACGGCCACGAACTCTTTCCTCTGTAAGCAAAGCCTCTCCCTCCA--------TCCCTCCCTCAGACTCCATTG
ATCGACTTGAGCTCTCGCTAGGCCTGTGCGTTTTCTCTACTATAGGTCTCTGCCCCGGTCCTTGGCACATCACCAAGGAG
GCAAGGACAAAGCACAAAGTCGTAGAGTTCGCATTTAACAATGGGAGCTTGTCAATGCCATGCGTTCAAAAA-CGCCATG
TGGGGCCGGGGTGGGTGGGGTGGGACCCGCCGAGGATTAGCAGCGCTTAATTGTCATGACCTTGATGACCCTATGATTTG
CGCATGGTCGCTCAGTAATATATACATACTCCAGTACTACATCGCGGTACGGTACGGTAGGATTGCACCATAATAATAGT
ATTGCAATGTGCATGTTATAATA-----GTGTAGACTTGTTAGTG--AGCACGTAGAGACAGGCGCTTCTTTTCAAGTAA
AGACAGATCTGGGTGTTACATGCTTAGATGGTAGCAAAGATTCTAATCTTGTGCGGGACTGCTCCTGCCAAAGTCGCACC
TTTTACGTGATCACTTCATTATTTTCAAGGCGCATTGGGCATGTGAATTGGATGATTATTAACTGGTTGATGATCGCTGC
CGCAGATGATGAGGACGATCTTTTGGGCTCCATTTTCTCCAAGAGGCCCACCTTGGGAGAAGAACCACCCGTGCTCCTCC
TCGCCCCGGCGGAGGCGGAGCCCCTCCTCAGCGCCTCCTCCTCCTCCAGCTGCCACGCGGACCCACCTGCCAGCGACGCC
GGCGGGGCCCGGGCGCAGGGCA------CCACCACCGAGCCAAGTGGCGCGCGGGCCCCGCCCCTCCCTCGCTCCTCCTC
CTCGTCGTTGAAACGCGCGACACCGGAAGGTGCTCTCTCGACTTCGACGCGACACGCTTCACAGTCGCCTCCACCCACTC
CCAAGAACTGTCTAATCACATAATCTAAGGAGTAATTAACTTTGACCGGCGTT-GTGTCTGGCAGCAGCATCGGACTCG-
-----GCGGAGGCGGAGTGCAGCCAGAGCGGCGGCAAGCGGCGGAAGGTGTCGGCG---AGCGTGCTGTGCCCGTTCGCC
GTGCTGAAGCCCGACGGGCTGGACGGCGGCGCGACGCTGGCGGACATCAACGCGCGCATCCTCATGCGGCCGGCGCGGCC
CGTGCGGCACCCCGTCGGCGAGTACGCGTGCGCGCCGCGCGTGCTGGCGGCCGACGCGCCGGGCATCTCGGGCAGGGCCG
TCTCGGGGTTCACGAGGCTGCACACCCCCGGCCGCGGCACCATCACCATCATGAGGACGCGAGGCTAATGCATCCATCAT
TGCAAGCC-------CTGTCCGCTGCGCCCATGGACGACGA-------TGATGATGGCGTACTCCGTGTAGATTAGCCCG
GCTCAATCA----GTGCATGGCTAGCTAGATAGACGCTCGATCGCTAGCCAGTGCTACGTAGCAGTGCCT------CCGA
GTCCCGATGCCGTGTAATTATATGCTCGATTA---CATAAG----GAGTGAGTGAGTGAATGAATAAAAATCCTTCCATT
TCTCTTCTCCCGATCTCGTTTTTGATCTT----CTTCTCGGATGCTCTGATAGCGATAGCGAAGGTTTCCTTGGAT----
----CGTCCGTCGCCGTAGCAAGGAACAAAGCCCGGCTGGTGG---CCCCTGTCCTTGTGCTCCTGGTAGCCAAGCAGGC
TGTG----TTTACGGCCGCATACATACAGCCCCGAAAAGCTGAAAGCAACTGCCTTTCCTTTTGTCTGCAAGGCGTGGGC
CTACTCCACCTTAATTCGAGCTGCCTCCATG----GCTCTTTGCATGAGATCTTTTTTT---CTTTTTGTAAAAGAATGG
ACTTGACTTGAGCATACCACATTGTTAATCAC---TCACCGCAAAGCCTTCCTCTGGAATGGCTTCTTTCTGTTTGTTTA
AAATA---------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------AAACGCTGTCCGGCAAAGAGAATATACGAAGGGATAAAGACGGTGGT
AGAGCAGGGCATGGTAAAAACCGCCAAAGTA-------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------AAAAAGGATTAAGAAATAAAGAAAGACGAGT
CGAGAGGATTTGATTTGAGGAAACG
>chr5A_213
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----------------------------------------------------TTTGGATGCAAGTATTCTGGCTGGTGCC
TTTGTGCATCTCCAAGGAGAGACCAGGACAGGTGCTACAAGCCTACAACCCAATTGCCGTCACCCTCTGACCAGTGAGAT
CACCGAAGAGCGCTGCTATACAGACGACAAATTTGGACGATCAGCGGACGACACTACACATCAAGCCGTTGATGCGTTAG
AGCAAAAGCAGACAACACCGTTCATTCCTGCATCGTGTGGGGTTCGGCCAGCTAGTGTCGTCCGTCCAGCAGTTTCGATC
ACCGAACCAGCAGCCACCCGCGCGGCTTTGACCTCGC-TGTAACAGACGCGCGCAGACCTGCAGTCTGCTT--ACTACTC
ATCACAATAACAAACTCAAACA--CATTGCACACTTTGAGGCAACAACAACAAAAAATACACAAGTAAAATAGCGGCGAC
ACGTGATGAGGGAAGGCGTCAGAGACTTAAAGCCGACGGCCAAACAAAGC-----------ACAAAGCCGTCCGTCGTAG
TACTAA----------TTCAGAGCCCTCGCCGACATACTGCATTTCGAATTGCCGCAGCCTGCGGAGGCGATTCCCGGGA
ACAAACCGATCGTTTCGGCAGGCAAAACAAAAGCAGGTGAGGATCGAAAGAAAAGCGAAAGAGAAGATTACAACGGGAGC
AGTAAAGAAAGCTGATCGAGGAGGAAGGGAGGCGTAGCGTA-CGTACATCGGCCAGCCAAAGGCCAAAGCGGCGGCACGT
AGAGGAAGGCCAGCGGCGAGCGAATCACGAGGAAAGCACGCCGGGAGATGGAGGTGGAGCGAGGGCAGCAGCCAACCACC
CCTATCTTTTGCTTTCGTTGCTTCGCTTGGACTTTGGTAGTACTACGTAGGTACGCACTCTCTGCTAACTGACTTTGGCC
GCGACTGTCACTGGACTGACTGACCCAGC---------------GGAAAGAAAATAACCAAGTGACGCAGCGGCCAACTG
GTGTGTGTACACAGGTGGTGCGTTACGGGGCGGCGGTGGACTCGGCATGCATGTCGCGGCTGCACGCTCT-GGGCTCTGG
CGTTGGGGGAAAAAGAAAAGCCGTCCTATTTAAGCACGCCCGGCCGCCGCACTCTGACGG-CC-CGCTCACACACACACA
CACACACACACACTCTCGCTCCTCTCGCTCTTGTCTTGCCACACAGGCGGGCGAGTGACGCGGCTCATCATACCGAGGGA
GGCCGTTGC---------ACCATGGAGACAGCGCAGGAAAGAGAGCTGCTGCAGCGGCTGCCGCTGCAGCTGCAGGGGTG
GCCTTTCCACGCCATGCCGCCCAGCTTCGACGCCGGCAGCG---------GCGGCA---------GCGGCAGCAGCAGCA
TGAGCAGCGAC---------------TCCTTCCTGCTCGGCTGGGAGCCGCCGTTCGGCGGCTGCTTCGGCCTCGCCGAC
GCGCAGCTCCACGACCTCTTCCCGCTCTGTACGTCGTGCGCGCGCCTGCCCGGCATCATGCCCGCGCTCTGTTTCCCTCT
CCCGCAGCTCCGGCGGAGAATTGAACTCGCCGTTTCTTCGACTGCAGGCATGATGGAGCCGCTCCCGCTGTCGCCGGCCG
CGACGTCCACGGCGGCGGGCCTCCCGTCGGAGCAGCAGGGCCCGGCGCCGGCGGCAATGCCCAACGGGGAGCTCGGCGAC
CTCCTGCTGGTACATACACAATGCCC----------------ATCCTTATCTCTCGCGTCCGAATTAACTACCGCGGCAG
TTTCTTGCGAGATTTCCTCGGCCGTGTGAAAACCGTCGCTTTCTCTCATTGTTCCCTCTCGGCAGAATTTCTGGGACGCC
GGTGATGTCAGCGAGCGGCCGGTCGCAATCAATTCAGGCTGCGTGGCACCGCAGCAGCACGAGAAGAGCAGCCAGAGCAG
CGCTGCCACCGCCACGAACTCTTTCCTCTGTAAGCAAAGCACCTCCCTCCCTCCATCCCTCCCTCCCTCAGATTCCATTG
ATCGGCTTCAGCTCTCGCTAGGCCTGTGCGCTTTCTCTACTATAGGTCTCTGCCCCGGTCCTTGGCACATCACCAAGGAG
GCAAGGACAAAACACAAAGTCGTAGAGCTCGCATTTAACAAT-GGAGCTTGTCAATGCCATGCGTTCAAAAAACGCCATG
TGGGCCC-GGGTGGGTGGGGTGGGGCCCGGCCGAGATTAGCAGCGCCTAATTGTCATGACCTTGATGACCCTATGATTTG
CGCATGGTAATATATAGAAGTATATTATAGTACTATCCT-----------GGTA-----GGATTGCACC---ATAATAGT
GTTGCAATGTGCATGTTATAATATAATAGTGTGGACTTGTTAGTGTGAGCACGTAGAGACAGGCGCTTCTTTTCAAGTAA
AGACAGATGTGGGTGTTACATGCTTAGACGGTAGCAAAGATTCTAATCTTGTGCGGGACTGCTCCTGCCAAAGTCGCACC
TTTTACGTGATCACTTCATTATTTTCAAGGCGCATTGGGTGTGTGAATTGGATGATTATTAACCGGTTGATGATCGCCGC
CGCAGATGATGAGGACGATCTTTTGGGCTCCATTTTCTCCAAGAGGCCCACCATGGCAGAAGAACCGCCCGTGCTCCTCC
TCGCCCCGGCGGAGGCGGAGCCCCTCCTCAGCACCTCCTCCTCCTCCAGCTGCCACGCGGGCCCACCCGCCAGCGGCGCC
GGCGGGGCCCGGCCGCAGGACGCTACCGCCACCGCCGAGCCATGTGGCGCGCGGGCCCCGCCGCTCCCCCGCTGCTCCTC
CTCGTCGCTCAAACGCGCGACACCGGAAGGTGCTCTCCCGACCTCGACGCGACACGCCTCACAGTCGCCTCCACCCACTC
CCAAGAACCGTCTAATCACATAATCTAAGGCGTAATTAACTTTGACTGGCGTCGGTGTCTGGCAGCAGCGGCGGAGTCGG
CGTCGGCGGAGGCGGAGTGCAGCCAGAGCGGCGGCAAGCGGCGGAGGGCGGCGTCGGGAAGCGTGCTGTGCCCGTTCGCG
GTGCTGAAGCCCGACGGGCTGGACGGCGGCGCGACGCTGGCGGACATCAACGCGCGCATCCTCATGCGGCCGGCGCGGCC
CGTGCGGCACCCCGTCGGCGAGTACGCGTGCGCGCCGCGCGTGCTGGCGGCCGACGCGCCGGGCATCTCCGGCAGGGCCG
TCTCGGGGTTCACGCGGCTGCACACCCCCGGCCGCGGCACCATCACCATCATGAGGACGCGAGGCTGATGCGTCCATCAT
TGCAGCACGCCATGTCTGCCTGCCGCGCCCATGGACGACGACGATGCATGATGATGGTGTGCTCCGTGTAGATTAGCCCG
GCTCAATCAGTGCGTGCATGGCTAGCTAGATAGACGCTCGATCGCTAGCCAGCACGTAGTAGCAGT-------ATCCCGA
GTTCCGATGCAGTGTAATTATATGCTCGATCA---CATCAGGAGTGAGTGGGTCAGTGAATGAATAAA-ATCCTTCCATT
TCTCTTCTCCGGATCTCGTGTTTGATCTTTCTTCTTCTCGGATGCTCTGATAGCGATAGCGAAGGCTTCCTTGGATCGTC
CGTCCGTCCGTCGCCGTAGCAAGGAACAAGAGAGCCGGCCGGTGGCCCCTTGTCCTTGTGCTCCTGGTAGCCAAGCAGGC
TGTGCGTGTTTACGGCCGCATACCTACAGCCCCGAAAAGCTGAAAGCAACTGCCTTTCCTTTTGTCTGCAAGGCGTGGGC
CCGCC---CCTTAATTCGAGCTGCCTCCATGTCAAGCTCTTTGCATGAGATCTTTTTTTTTTCTTTTTGTAAAAGAATTG
ACTTGACTTGAGCATACCACATTGTTAATCAC---TCACCGCAAAGCCTCCCTCTGGAATGGCTTCTTTCCGTTTGTTTA
AAATATACTTCCTCCGTTCCAAAATAGATGACTCAACTTTATACTAACTTTAGTATTTCTTCTGTTCATTTCTATAAGAC
CTTTCAGACAATGTGCAAAACAACCTATTTTGAATTGTTCGAAACGACTTACAAAAGTGAACGGAGGGAGTATAAAGTTG
GGTCATCTATTTTAGAATGGATGGAGTAAAATCAAACACCGTCCGGCAAAGAGAATATACGAA-GGATAAAGACGGTGGT
AGAGCAGGGCATGGTAAAAAC-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------
>SNPs
-------------S----S--------------S------------S--------------------------------S
---------------------------S---------S-----------------S-----S--------------SS--
----------------------------------------SSS--------S-----S----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------S---S------------------------------------------------SS-------
----------S---------------------------------S--S-SSS-SS-----------------S---S---
----------S-----------------------------S-------------------------------S-------
----------------------S---------------------------------------S-----------------
-----S--------------------------------------------------------------------------
---------------------------S-------------S---------S----------------------------
---------------------------------------S--------------SS----SSS-----------------
----------------------------------------------SSSS------------------------------
--------------------SSSSS-SSS-------------------S--------------------SS---------
---------------S--S-----------------------S---------------------------S---------
--------------------------------------------------------------------------------
---S-------S---------SSSS-------------S-----------------------------------------
---------S--S-------------------------------------------------------------------
--------------------------------------S--SSSSSSSSS------------------------------
-----------SSSSSSSSSSSSSSS----------------------S-------------------------------
-----S----------------------------------------------------------S---------------
--------------S-----------------------------------S-------------S--S------------
--------------------------------------------------------------------------------
--------------S----SS-----SSSSSSSSSSSSSSSS--------------------------------------
---------------------S----------S--------------------S--------------------------
--------S--S-----------------------S---------S----------------------------------
---------------------------------------S--S----------S--------------------------
-----------------S----------SS-----SSS------------------------------------------
------------------S--------------------S----S-----------------------------------
----------------------------------------------------------S---------------------
------------S--------------------------S----------------------------------------
--------------------------------------------------------------------------------
-----------------S----S----------------------------------------------------S----
-------------------------S-----S--S---------------S-----------S-----------------
----------------------------------------------------S-----------------------S---
---------------------------S--------------------------------------S-------------
--------------S---------------------S-------------------------S-----------------
---------------S--------S-----------------------------------------S-------------
S-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------S------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------SS----------S-SSSSS-------
--------------------------------SSS---------------------------------------------
-----------------------S--------------------------------------------------------
-----------------S--------------------------------------------------------------
----------------------------S---------------------------------------------------
---------------------------------------------------------------------S----------
--------------------------------SSS----S----------------------------------------
---S----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------S----S-S-------SS-SSSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----S-------------------------
-------------------------
>forward_1141
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-CGACTGTCACTGGACTGACC-----------------------------------------------------------
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>reverse_2365
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------AAGCTTGTCAATGCCATGCG----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------
>forward_1811
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------GTTTCTTCGACTGCAGGCAC-----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------
>reverse_3107
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------ACCTCCACCCACTC
TCAAGA--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------
>forward_2459
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------GCAGCGCCTAATTGTCATGG---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------
>reverse_3949
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------ACCCCGAAAAGCTGAAAGCA--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------
