>input_sequence_36803
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------ATGGAGTCCGGGGCGCCTCCCGCGTTGCCCTGCCCCG
TCGACGACGACGACGATTTCTACTGGGACGCCGAGGCCGAGGCGGAGCTCCAGGCCATCGAGGCCGCCTACGCCGCCGAG
TCCGCCAAGCGCCGCCGCCTCCCCGACTGGTCCAAAACCCCCG------CCGCCCCCGCCCCCGTCCGCCCACGACCCAA
CCCGGCCCCCGCGGCCGCGAGCGCCTCCTCGCCGTCGTGGGTCCTCTCGCCCCCCACTTGCCAAGGTGCGGCTCCA--CT
----------------TTCCCCTTCCTCCCGAAATCAAAGAACCCAAGAACTCATCTTT--------CCACCCA----AA
TGTGCGTGGAAGAACTAGGGTTCTTGGTGCTACAGTTTCACCACTTGGAAGAAAATCCCCTGTTAGGGTTCAGTTTTACA
GTTTTTGGTAAGATGGCAGCTCTGTCTGATTGTTCATGTATTATATACTCTGTTAGGATTCAGTA--------TCGTCAC
CGACAGTGCTATGGTTCATATGGATGGGTTGGTTGGTTGGTCGATTTGTGTAGAATGGCACCTAGTTGTAGTGTATGTTT
ATCTGCCTTAATCTTCTTGTGGGATTGACACATCTGAATCCTGTCTCCGCTGGATTTTGCGCCACAGGGAGTGTGAAGGC
TAGGTACCAACAGGTGGCATTCAGCGGCAAGATAGTGTACTGCCGGACAGCAATTGAAGTGGAGAAAGCTACACGGGAGA
TTGTGCGCAAAATCGAAAGCATGAAGGCCTCTGGCCAGGTCTCCCTTGGTTTCGATCTCGAGTGGAAACCCTTCCCCAGA
AGAGGTTTGCTGTTCTGCCCATAGCCTAATGTTTAGTTGCATTTTCAGACTGCAAAATGTGGGTTTCTGGATGAATGGTT
TTTAAGTTGACTCCTGCAAATGATCTAATCTGACGGAACAACCATTGCCATGGATTTTGCAGGAGAACCGCCTTGTAAAG
TCGCGCTAATGCAGTTATGCATGGACAAAACTCATTGTTATCTCATGCATATCATTCACTCTGGGGTGCCTCCCATCTTG
AAATCTCTTTTGGAGGACAGTTCATCCGTTAAAGTGCGTAATTTGGTTTTCCCCATAAGACATTTGCTTCTTTCTCCATA
GATTATATGCTCTTCCCCCTAGAAACGGGTTGCCCCTTTTGGTCATGTAAGACATTGTTGTCTTGTCTATGCAGGTTGGA
GTATGTATAGACAACGATGCAAGGAAAATGTTCAATGATTATGAAGTACGTGTACAACCATTGATGGATTTATCAACTGT
TGCAAATGTCAAGTTAGCTGGGCCTTATAAAAGATGGAGTCTTGCTGCATTAACCGAAATGATCACATGTAAAGAGGTAA
TTCCTATTGTATTAGCTACTCCCTCCGTCCCAAAATGTAAGATCATTTTTTACACTAAGATATTATCAAAAA-TGATCTT
ACATTTTGGGACGGAGGGAGTATTGTTTAGTACTGC-TTTTTTTTAT--CCAGTTCTGTTGGCACTGGAAAGAAACACTC
TTCAGGCATTTATTCATTTATGTGTTTTATGTATCAAGGAAATTTGGTTGGTTGAACGATAGAGGTTCAATTATGATTTG
GTAGACAGAACACCCAGATGCCTAGGGAATACAAGC-ATTTTTATCATCAATAAATTATTAAATTGAAATTCTTCTGGTT
GCTGATATTTGCAATTTGCATGCTTGGTCTATATCTCTGCATTGTGGGAATGCTTGATGGGGTAGTTCCGTGGTTGAGAC
AATTTCAGTTATTGTTTAGCAGAACAAACTCTGAAGTTTCTATGAAATGTAATT-TTTTTTGCTAGATAAG-CTGCTTGG
GTTATATTCTTTTACTGATTTATTGTTTTCATTGCACTAACTTGTTGCTGTGTTGCAATGCTCTTTACCACCCGCAACTT
CATGCCTATAAGTTACCAAAGCCTGGCAACATAAGAATGGGAAACTGGGAGTCTTTTGTTCTCTCAAAAAAGCAACTTGA
GTATGCTGCTACGGATGCCTACATCTCGTGGTACTTGTATGAGGTATATGA---ATATACTATTCAATTTGCTTTCTTAT
AAGCTGATATTCCTTTCTCCACAGTCTTGACAGCAATTACTGCACTTTGTTAGGTACTACGGAGTCTTCCTGATTATACT
CCTGATATTGAAACAGAGGTTGTTTAG-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------
>chr2A_1_TraesCS2A01G011600
TAGTATCCCTTGCCTTGCACAAATGGGCTAAGTGGGCCTCTAGGATTTATTAGAAATTTCTGAAATAGTTATTGGGCTGC
CCAAAATAAACTAAATTCCAGCATACATGACTTTCATGTATGTTGGATTCAATGTTCATGGGAAATTGGTTAATAGAGCT
CTTGGGTCGGTATGGTGTTGTATGTAGCTCAAAGATCCGGTTTTTTGCAACAAATATTTTTTCGGAGCTTCTAGATGCAT
TTCTTAAATTGTGAACAAATATTGGTTAATAGGGCAAATGTGGACATTTCTTAAATTGTGAACTTCTTTTGAAAATAATT
ATTTTAAAAAATTATGAACTTTTTCAACCTTGTCAATATTTTTAAAAATCCATGGACTTTTTTGAAATTTTATGAAGACT
TTTTAAAATCCATTATTTAAAAAAAATATATGACTGTTTTTTTATCTAACTAACTTTTCTTGAAAAAATATTGCCATTTT
TTCCCTAAGCCAATAGCAGACCATGAGCGAGCCAAGGAAAAAATGAACGAAGCGGACTAGCCATCGAGCGAAAACGAGCA
AGAAACTAGACATGATTCAAAGCGCGGACGCAAATTCATTGCTGGCAATGCACTTGTGGCTTCAAAATCTCTATTCATTG
CTACTAATGCACTTGTGGCGCAAGGATGCAAAGCGGTAACATCATTGGACAAAAGCTCAGTATTAATTTTACATCTCCTT
TGGAACACAAAGTCGACGCAGACGCTCACCCTCGAGAGACCAAATTCTCTTGGATTTGCCGAATTTCTGATTGAAAGGTC
TCTTTGATTTGGATTCTGCCAAATGTTTCTCACCTGACCTTTATGCCATGTAAAGTTGCTGAAAGTTCCCTCTCAGCCCC
-CCACAATTTTAAAATTGGCAATATACATACAGGAAGAATG--AAAACTCGAACTTTTCCCCTCCCCCCAGACTCCCAGT
CCCACCACCGGCGCCGGCGAGTCGTCCACCGGATCCGGCCGCCATGGAGTCCGGGGCGCCTCCCGCGTTGCCCTGCCCCG
TCGACGACGACGACGATTTCTACTGGGACGCCGAGGCCGAGGCGGAGCTCCAGGCCATCGAGGCCGCCTACGCCGCCGAG
TCCGCCAAGCGCCGCCGCCTCCCCGACTGGTCCAAAACCCCCG------CCGCCCCCGCCCCCGTCCGCCCACGACCCAA
CCCGGCCCCCGCGGCCGCGAGCGCCTCCTCGCCGTCGTGGGTCCTCTCGCCCCCCACTTGCCAAGGTGCGGCTCCA--CT
----------------TTCCCCTTCCTCCCGAAATCAAAGAACCCAAGAACTCATCTTT--------CCACCCA----AA
TGTGCGTGGAAGAACTAGGGTTCTTGGTGCTACAGTTTCACCACTTGGAAGAAAATCCCCTGTTAGGGTTCAGTTTTACA
GTTTTTGGTAAGATGGCAGCTCTGTCTGATTGTTCATGTATTATATACTCTGTTAGGATTCAGTA--------TCGTCAC
CGACAGTGCTATGGTTCATATGGATGGGTTGGTTGGTTGGTCGATTTGTGTAGAATGGCACCTAGTTGTAGTGTATGTTT
ATCTGCCTTAATCTTCTTGTGGGATTGACACATCTGAATCCTGTCTCCGCTGGATTTTGCGCCACAGGGAGTGTGAAGGC
TAGGTACCAACAGGTGGCATTCAGCGGCAAGATAGTGTACTGCCGGACAGCAATTGAAGTGGAGAAAGCTACACGGGAGA
TTGTGCGCAAAATCGAAAGCATGAAGGCCTCTGGCCAGGTCTCCCTTGGTTTCGATCTCGAGTGGAAACCCTTCCCCAGA
AGAGGTTTGCTGTTCTGCCCATAGCCTAATGTTTAGTTGCATTTTCAGACTGCAAAATGTGGGTTTCTGGATGAATGGTT
TTTAAGTTGACTCCTGCAAATGATCTAATCTGACGGAACAACCATTGCCATGGATTTTGCAGGAGAACCGCCTTGTAAAG
TCGCGCTAATGCAGTTATGCATGGACAAAACTCATTGTTATCTCATGCATATCATTCACTCTGGGGTGCCTCCCATCTTG
AAATCTCTTTTGGAGGACAGTTCATCCGTTAAAGTGCGTAATTTGGTTTTCCCCATAAGACATTTGCTTCTTTCTCCATA
GATTATATGCTCTTCCCCCTAGAAACGGGTTGCCCCTTTTGGTCATGTAAGACATTGTTGTCTTGTCTATGCAGGTTGGA
GTATGTATAGACAACGATGCAAGGAAAATGTTCAATGATTATGAAGTACGTGTACAACCATTGATGGATTTATCAACTGT
TGCAAATGTCAAGTTAGCTGGGCCTTATAAAAGATGGAGTCTTGCTGCATTAACCGAAATGATCACATGTAAAGAGGTAA
TTCCTATTGTATTAGCTACTCCCTCCGTCCCAAAATGTAAGATCATTTTTTACACTAAGATATTATCAAAAA-TGATCTT
ACATTTTGGGACGGAGGGAGTATTGTTTAGTACTGC-TTTTTTTTAT--CCAGTTCTGTTGGCACTGGAAAGAAACACTC
TTCAGGCATTTATTCATTTATGTGTTTTATGTATCAAGGAAATTTGGTTGGTTGAACGATAGAGGTTCAATTATGATTTG
GTAGACAGAACACCCAGATGCCTAGGGAATACAAGC-ATTTTTATCATCAATAAATTATTAAATTGAAATTCTTCTGGTT
GCTGATATTTGCAATTTGCATGCTTGGTCTATATCTCTGCATTGTGGGAATGCTTGATGGGGTAGTTCCGTGGTTGAGAC
AATTTCAGTTATTGTTTAGCAGAACAAACTCTGAAGTTTCTATGAAATGTAATT-TTTTTTGCTAGATAAG-CTGCTTGG
GTTATATTCTTTTACTGATTTATTGTTTTCATTGCACTAACTTGTTGCTGTGTTGCAATGCTCTTTACCACCCGCAACTT
CATGCCTATAAGTTACCAAAGCCTGGCAACATAAGAATGGGAAACTGGGAGTCTTTTGTTCTCTCAAAAAAGCAACTTGA
GTATGCTGCTACGGATGCCTACATCTCGTGGTACTTGTATGAGGTATATGA---ATATACTATTCAATTTGCTTTCTTAT
AAGCTGATATTCCTTTCTCCACAGTCTTGACAGCAATTACTGCACTTTGTTAGGTACTACGGAGTCTTCCTGATTATACT
CCTGATATTGAAACAGAGGTTGTTTAGGGAACATATTTGCAGATACGCAAGAAATCGGAAAGTGTACTGTTAAGCTA-TT
GATGACTCCCTAG-------TGTTCTGTAACTTCACTTCTCAACCAGGTCAGCAATGTTGAATCTTTTACAGTTTACATT
ACCTGCAGAAGCCGATGCTAG------------------------CTATGACTTATTTT-CACCTCCAATGATTCTATGC
TGTCTTGTCCCACTCAGGGTTTAGCACAAGATTCTTTCTTATATGTGGAGAATTGGATACCATAGATTTTACATTAGCTT
TTACTTGTTTATGAATGGTT------------------TCAAATGGTTCAAGGCTAGTTTAGTTTTTGTTTGGTGCCATT
TAGTTATATTGTCTGTATATTCTGAAAATCTTCCTTGAGAAAATCAAAACTTGTTGGTTTTCCTTGTTTTTATCAAAAAC
TTGCTAGTTCCAATTAGGTCTGTCATAAAGTCCCAACTTAGGGCACTCCCAGTGCTCCAACCCGTTCCGTATCTAAATTT
GCCATATAGCATTAAACCTGATGTGGAGGTACAATTAAAGATCTTTTTTGACATGGGGGTATAATTAAAGGTGAGAGAGA
GGAAACCGCACCTAGATTTAGATATGACTCTTGTAGGTGGAACTGAGACAAATTATTTGCCATCCTGATCTCTTGCGCAT
ATCCTCCTCGCTTTTG---TTCACTTGCCCATCGTCCTCGTAACCACAGTATGCTCATTGCCCAACCTGTCGTTGTCCTC
TCCTTTCTAACCAAGCCGCACCGTCATCCCAATTCAAAACCGCGGCAGCTGTTGTCTCAGTTCGAAGCCACCAGAGCCAT
TGTCTCCACACCG-CCTCAAAGTGTCGTGACCTCTGCATTGTCGCCTCATGAAACAGTTGTTGTCGCATCCTCGCCGACC
CAAGCAGCTGCTGGTATTGCATCCTAGATTGACTGACATGAATAGTGAGCATGACCCTACCAACAACTGGATCTCCCATG
CACAAAAGCGCCCATCAGGCCTTCTCCTTCAACTCCTGTCAG
>chr2D_854
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------AGTAGCTGAATGTTCCCCCTCAGTCCC
TCCACAATCTTAAAATTGGCAATATACAGGAAG-----AAAAAAAAACTCGATCTTTCCCCCTCCTCGAGACTCCCAAGT
CCCACCACCGGCGCCGGCGAGTCGTCCACCGGATCCGGCCGCCATGGAGCCCGCAGCGCCTCCCGCGTTGCCCTGCCCCG
TTGACGACGACGACGATTTCTACTGGGACGCCGAGGCCGAGGCGGAGCTCCAGGCCATCGAGGCCGCCTACGCCGCCGAG
TCCGCCAAGCGCCGCCGCCTCCCCGACTGGTCCAAAACCCCCGCCGCCCCCGCCCCCGCCCCCGTCCGCCCACGACCCAA
CCCGGTCCCCGCGGCCGCGAGCGCCTCCTCGCCGTCGTGGGTCCTCTCGCCCCCCACTTGCCAAGGTGCGGCTCCCCCCT
----------------TTCCCCTTCCTCCCGAAAGCAAAGAACCCAAGAACTCATCGTTCCACCCGCCCACCCATCCAAA
TGTGCATCCAAGAACTGGCAG---------------TTCATCACTTGGAAGAAAATCCCC------------------CA
GTTTTTGGTAAAATGGCAGCTCTGTCTGATTGTTCGTGTGTC--ATACTCTGTTAGGGTTCAGTACTTCAGTTTCATCAC
CGACAGTGTAGGGTTCATA----------GGGTGGGTTGGTTGGTTGGTGTAGACTGGCACCTAGTGGTAGTGTATGTTT
ATCTGTCTTAATCATCTTGTGGGATTG--ACATCTGAATCCTGTCTCCGCTGGATTTTGCGCCACAGGGAGTGTGAAGGC
TAGGTACCAACAGGTATCATTCAGCGGCAAGATAGTGTACTGCCGGACTGGAGCTGAAGTGGAGAAAGCTACACGGGAGA
TTGTACGCAAAATCGAAAGCATGAAGGCCTCTGGCCCGGTCTCCCTTGGTTTCGACCTCGAGTGGAAACCCTTTCCCAGA
AGAGGTTTGCTGTTCTGCCCATAGCCTAATGTTTAGTTGCATCCTCAAACTGCAAAATGTGGGTTTCTGGATCAATGGTT
TTTAAGTTGACTCCTGCAAATGATCTACTCTGACGGAACAGCCATTGCCATGGAATTTGCAGGAGAACCGCCTTGTAAAG
TCGCGCTAATGCAGTTATGCTTGGACAAAACTCATTGTTATCTCATGCATATCATTCACAGTGGAGTACCTCCTATATTG
AAGTCTCTTTTGGAGGACAGTTCATCCGTTAAAGTGCGTAATTTGGTTTTCCTCATAAGACATTTGCTTCTTTCTCCATA
GATTATATGCTCTTCCCCCTAGAAACGGGTTGCCCCATTTGGTCATGTAAGACATTGTTGTCTTGTCTATGCAGGTTGGA
GTATGTATAGACAACGATGCAAGGAAAATGTTCAATGATTATGAAGTACATGTACAACCATTGATGGATTTGTCAACTGT
TGCAAATGTCAAGTTAGCTGGGACTTATAAAAGATGGAGTCTCGCTGCATTAACCGAAATGATCACATGTAAAGAGGTAA
TTCCTATTGTATTAGCTACTCCCTCCGTCCCAAAATGTAAGATCATTTTTTACACTAAGATATTGTCAAAAAATGATCTT
ACATTTTGGGATGGAGGGAGTATTATTTAGTACGGCTTTTTTTTTAT--CCAGTTCTGTTAGCACTGGAAAGAAACACTC
TTCAGGCATTTATTCATTTATGTGTTTTATGTATCAAGGAAGTTTGGTTGGTTGAACGATAGAGGTTCAATTATGATTTG
GTAGGCAGAACACCCAGATGCCTAGGGAATACAAGC-TTTTTTATGATCAATAAATTATTAAATTGAAATTCTTCTGGTT
GCTGAT-------ATTTGCATGCTTGGTCTATATCTCTGTATTGTGGCAATGCCTGATGGGGTAGTTCCGTGGTTGAGAC
AATTTCAGTTATTGTTTAGCAGAACAAACTCTGAAGTTTCTATGAAATGTAAACATTTTTTACTAGATAAACCTGCTTGG
TTTATATTCTTTTACTGATTTATTGTTTTCATTGCACTAACTTGTTGCTATGTTGCAATGCTCTTTACCACCTGCAACTT
CATGTCTATAAGTTGCCAAAGCCTGGCAACATAAGAATGGGAAACTGGGAGTCTTTTGTTCTCTCAAAAAAGCAACTTGA
GTATGCTGCTACCGATGCTTACATCTCGTGGTACTTGTATGAGGTATATGATGAATATACTATCCAGTTTGCTTTCTTAT
AAGCTGATATTCCTTTCTCCACGATCTTGACAGCAATTACTGCACTTTACTAGGTACTACGGAGTCTTCCAGATTATACT
CCTGATATTGAAACAGAGGTTGTTTAGGGAACATATTTGCAGGTATACAAGAAATCGGAAACAAAGGT------------
--------------------TGTTCTGTAACTTCACTTCTCAACCAGGTCAGTAATGTTTAATCTTTTACAGTTTACTTT
ACCTGCAGAACCCGATGCTAG------------------------CTATGACTTATTTTTCACCACCAATGATTCCATTC
TGTCTTTTCCTACTCAGGGTTTAGCACAAGATTCTTTCTTATATGTGGAGAATTGGATACCATAGATTTTAAATTAGCTT
TTACTCCCTCTGTAAACTTTTATAAGACCTTTTAGATCTCAAATGGTTTAAGACTAGTTTAGTTTTTGGT--GG--CATT
TAGTTATATTGTCTGTATATTCTGAAAATCTTCCTTGAGAAAACCCAAACTTGTTGGGTTTCCTTGTTTTCATCAAAAAC
TTGCTAGTTCCAATAGGGTCTGTCATAAAGTCCCAGCTTAGGGCACTCCCAGTGCTCCAACCTGTTCCGT---TAAATTT
GCCACATAGGATTAAACCTGATGTGGAGGTACAATTAAATATCTTTTTTGACATGGAGGAAACCAT--------------
---------ACCTAGATTTAGATACGACTCTTGTAGGTGGAACTGAGACAAATCATTTGCCATCCTGATCTCTTGCACAT
ATCCTCCTCGCTTTTCTTTTTCACTTGCCCATCGTCGTCGTAACCACAGTACGCTCATTGCCCAACCTGTCGCTGTCCTC
TCCTTTCAGACCAAGCCACACTGTCATCCCAATTCAAAGCCGTGGTTGCTGTTGTCTCAGTTCGAAGCCACCAGAGCCAT
TGTGTCCACACCACCCCCAAAGTGTCATGACAGTTGTCC------------------------TCGCATCCTCGCTGTCC
CAAGCAGCCGCTGGCATTGCATCCGATCA------ACATGAATAGCGAGCATGACCCTACCAACAACTGGATCTCCCCTG
CACAAAAGCGCCCATCAGGCCTTCGCCTTCAACTCCTGTCAG
>chr2B_858
--------------------------------------------------------------------------------
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---------------------------------------------------------GCTGAATGTTCCCTCTCAGT-CC
-CCACGATTTTAAAATTGGCAATATACATACAGGAAGAAAAAAAAAACTCGATCTTTCCCCCTCCTCCGATACTCCAAGT
CCCACCACCGGCGCCGGCGAGTCGTCCACCGGATCCGGTCGCCATGGAGTCCGGGGCGCCTCCCGCGTTGCCCTGCCCCG
TCGACGACGACGACGATTTCTACTGGGATGCCGAGGCCGAGGCGGAGCTCCAGGCCATCGAGGCCGCCTACGCCGCCAAG
TCCGCCAAGCGCCGCCGCCTCCCCGACTGGTCCAAGACA---------CCCGCCCCCGCCCCCGTTCGCCCACGACCCAA
CCCGGTCCCCGCCGCCGCGAGCGCCTCCTCGCCGTCGTGGGTCCTCTCGCCCCCCACTTGCCAAGGTGCGGCTCCCCCCT
CTTCGTGCATCCCGCTTTCCCCTTCCTCGCGAAATCAAAGAACCCAAGAACTCATCGTTCCACCCGCCCACCCA----AA
TGTGCGTGGAAGAACTAGGGTTCTTGGTGCTGCAGATTCATCACTTGGAAGAAAATCCCC------------------CA
GTTTTTGGTAGAATGGCAACTCTGTCTGATTGTTCATGTG----ATACTCTGTTAGGGTTCAT-----------------
-----------------------ATGGATGGGTCGGTTGGTTGATTTGTGTAGATTGGCACCTTGTTGTAGCGTATGTTT
ATCTGCCTTAATCTTCTTGTGGGATTGAG---TCTGAATCTGGCCTCCGCTGGATTTTGCGCCACAGGGAGTGTGAAGGC
AAGGTACCAGCAGGTAGCATTCAGTGGCAAGATAGTGTACTGCCGGACGGCAATTGAAGTGGAGAAAGCTACGCGGGAGA
TTGTACGCAAAATCGAAAGCATGAAGGCCTCTGGCCCGGTCTCCCTTGGTTTCGATCTCGAGTGGAAACCCTTTCCCAGA
AGAGGTTTGCTGTTCTGCCCATAGCCTAACGTTTAGTTGCATTTTCAAACTGCAAAATGTGAGTTTATGGATGAACGA-T
TTTAAGTCGACTCTTGCAAATGATCAAATCTGACGGAACAACCATTGCCATGGATTTTGCAGGAGAACCACCATGTAAAG
TCGCGTTGATGCAATTATGCATGGACAAAACTCATTGTTATCTCATGCATATCATTCACTCTGGCGTGCCTCCCATCTTG
AAATCTCTTTTGGAGGACAGTTCATCCGTTAAAGTGCGTAATTTGT---------------------TTATTTCCCCATG
GGTTGTACAATCTTTCCCCCACAGATGGGTTACCCTTTTTGGTCATGCAAGACATTGCTCTCTTGTCTATGCAGGTTGGA
GTATGTATAGACAATGATGCAAGGAAAATGTTCAATGATTATGATGTCCGTGTACAACCATTGATGGATTTATCAACTGT
TGCAAACGTCAAGTTAGCTGGGCCCTATAAAAGATGGAGTCTTGCTGCATTAACTGAAATGGTTACATGTAAAGAGGTAA
TTCCTATTGTATTC------------------------------------------------------------------
----------------GGAGTATTATTTAGCACTGC-TTTTTTTTTTACCCAGTTCTGTTAGCACCGGAAAGAAACAGTC
TTCAGGCATTTATTCATTTATGTGTTTTATGTATCATGGAAGTTTGGTTGGTTGAACGAAAGAGGTTCAATTATGATTAG
GTAGACAGAGCACCCAGATGCCTGCGGAACACAAGCTTTTTTTATAATCAACAATTCATTAAATTGAAATTCTTCTGGTT
GCTGAT-------ATTTTCATGCTTGGTCTATATCTCTATT----------------------------GTGGTTGAGAC
AATTTCAGTTATTATTTAGCAGAACAAACTCTGAAGTTTCTATGAAATGTGAACATTTTTTACTAGATAAGCTTGCTTGG
TTTATATTCTT-TACTGATTTTTTGTTTTCATTGCACTAACTTGTTGCTATGTTGCAATGCTCTTCACCACCTGCAACTT
CATGTCGATAAGTTGCCAAAGCCTGGCAACATAAGAATGGGAAACTGGGAGTCTTTTGTTCTCTCAAAAAAGCAACTTGA
GTATGCTGCTACCGATGCCTACATCTCGTGGTACTTGTATGAGGTATATGATGAATATACTATCCAGTTTGCTTTCTTAT
AAGCTGATATTCC--------------TGACAGCAATTACTACACTTTGCTAGGTACTACGGAGTCTTCCAGATTATACT
CCTGATATTGAAACAGAGGTTGTTTAGGGAGCATATTTGCAGATATGCAAGAAATCGGAAAGTGTACTGTTAAGCTATTT
GATGACTCCCTAGTGTTCTCTGTTCTGTAACTTCGCTTCTCAACCAGGTCTGTAATGTTGAATCTT-------TTACTTT
ACCTGCAGAACCTGGCGCCAGTTGTGACACTTTTTTTGCGAAAAACTGTGACTTATTTT-CACCCCCAATGGTTCCATGT
TGTCTTTTCCTACTCAGGGTTTAGTACAAGATTATTTCTTATATGTGGAGAATTGGATATCATACATTTTACATTAGCCT
TTTCTGGTCTATGAATGGTT------------------TCAAATGGTTCAAGAGTAGTATAATTTGTTTCGCGG--CATT
TGGTTATATTGTCTGTATATTCTGAAGATCTTCCTTAAGAAAATCAAAACTTGTTGGTTTTCCTTGTTTTT-TCCAAAAC
TTGCTAGTTCCAGTTAGGCCTATCA--AAGTCCTAGCTTAGGGCACTCTCAATGCTCCAACCTGTTCTGTATCTGAATTT
GCCGCATAGGATCAAATCTGATGTGGAGGTATAATTAAA-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---S------S------------S---
---------------------------------------SS-----------S----S-------S--S-S-----S---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----S---------------------------------------------------------------------S----
--------------------------------------------------------S-----------------------
-------------------------------S---S----S-------------------SSSSSSSSSSSSSSSSSS--
-----------S---------------------------S-SSS-------------S-----------------S----
--------SSSS-S-SSSSSSSS----S-S---S-------S------------S-------------------------
----------------------------S---------------------------------------------------
---------------S--------------------------------S-------------------------------
----S-------------------------------S------------------------------------S------
-----------------------------------------------S--------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------S---------------
----------------------------------------------------S---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------S---------------
-----------S------------S-----------------------------------S-------------------
-----------------------------------------S--------------------------------------
-------------------------------------S-------S----------------------------------
------SSSSSSS--------------------------S-------S-----S--------------------------
----------------------------------------------------SS-------S------------------
S------------------------------------------------S----------------------S-------
----S---------S-----------------------------------------------------------------
------------S--------------------------------------------------S--S-------------
----------------------SS-------------------------S--------------------S---------
---------------------------------------------S----------------------------------
----------------------------------------------------S------------------------S--
----------S-----------------------------------------------------S----------S----
------S---S---------------------------------------------------------------------
-----S----------------------------------------------S-----------------SS-SSS----
--------------------------------------------------------------------------------
-----------------------------------S--------------------------S-----------------
----S----S-----------------------------S----------------S--S-SSSS-SSSSSSSSSSSSSS
SSSSSSSSS---------------S----------------------------S----------------------S---
---------------S--------------------S--------------S--------------------S-------
-------SS--------S---S----------------S---S--SS---------------------------------
---S--------S---S---------S----SSS--SSSSSSSSSSSSSSSSSSSSSSSSSSS------------S-S--
--------S-----S---------S-SSSSSSSSS----------S-------------------------------S--
------------------------S-----------------
>forward_624
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------GCAATGCACTTGTGGCTTCA----------------
--------------------------------------------------------------------------------
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>reverse_1834
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------CCCCAGA
AGAGGTTTGCTGT-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------
>forward_741
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-GGAACACAAAGTCGACGCAG-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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------------------------------------------
>reverse_2774
--------------------------------------------------------------------------------
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-----------------------------------------------------TTGATGGGGTAGTTCCGTGG-------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------
>forward_946
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------ACTCGAACTTTTCCCCTCCC--------------
--------------------------------------------------------------------------------
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------------------------------------------
>reverse_2930
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------GTGTTGCAATGCTCTTTACCAC---------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------
>forward_1534
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------CGTCAC
CGACAGTGCTATGG------------------------------------------------------------------
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------------------------------------------
>reverse_3358
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-----------------------------------------------------------------------------ATT
ACCTGCAGAAGCCGATG---------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------------------
