>input_sequence_36801
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----------------------------------------------------------------ATGAAGAAACAGAAAA
TGGCGAATGGACCATCACACGACAAGAACAAGGTGTTCGCCAGTTTGACTCACGAAGATGCTTCAGATATTGATCCGTCT
TACAAGATTTTCTTGGAAAATCTTATTGAAGATGGAAGTGCGTATGTGTTTCATATGCCAAATGGGGACCATGGCTTGCC
TGCTTCCATCAGGTATGAAGAGGATGCTATGTCATATGGA------------------GGC------------------A
CAAATGTCCCCAAAAAATTGCCACACACAAGTCGGGGTGGTCCAAATGTCAAGCGACTAGATCAAACATCAG---GCAGG
GCTGTCAATGGAAATGCGGGCCATTCCTTTCTACCAAGGACATTGTCTGTGAAGAACAACACCTCAGAGGTCGATGAATC
TTATGCAGAATTTCTGAGCCTCATGAAGATCAAGGATGGTTTCATGGTTCTTGAGCTGGAACCAGGTGTTACTGTGGTAT
ACGAGCAAGAGGAGAAGACACCCCCTGGATATGATGAATTGAGAACTTTGGTTATGTCTGAACGTGGAATTGACGGGCCT
GCTCCAGAAAATTTGCATGGTCAGGATTTAATCTGCACAGATGAGCATGGACTTGTACCTTGTACTGAATCTTCTGATTT
TAACGTGAGTTTTACTTCTGTTTAGTTTTGTGGGTTATCTCTTTAATGATTCTGTTTTTATCCTGTAACTTTTTAATTTT
TTTTTGTGGCAGGCATCTGAAGAATGTGAAGAAGCACCTATTGCTCTTAGTTGTGGTGCTCCTTCTACATTTGATGAAAA
ACTTGATTCTGTTTTAAGTCAGCCATATGACCAAAATGAATACAAAGAGCTTATGAGAAAAGCCACTGACCAGAAGCCTG
TGAGCAGACAAAGACAATTGCGAAGTGGATCCAAGCGCTATGCCACAGGATTCGTTGGACTGTCGTATCTTGATCACTAC
CCAGGTGGTTACTATATTGTCTATGGGCAACCTTTTAAGCCCGATGGGGTTATTCCGTTCTTGCGCCTTTATTGTGGTTG
TAGTCTAAAAGCTTCATTTTGAACCTTAATTTCAGCGAGGTGTTGATAAGCATTTCTCAAACT-----------------
----------------------GTGCATTTTATGGTCCGGTGCAAATCATAACTGAGTTATGCTCCCAGCATATAGCTTG
ACCAAACCAGTGATTTAATAGCCATGTTGAAATGTTTTCTTCCAAACGGATCACTGTATTCTATTAGAAGTCAGTAATTT
AATCTGTTCATCTCCGGTTTGTATGTAAATAAAGTTATTTATAATAT-----GGATCATAGAACAACAAATCTTGATATT
TAAGTGGCTTGGATTAGCTAGCTGTAGC--------TGTGCCCAGTGAGCTTTCTTCTGTAAACAGACATTTGAAATTTT
AGATGCATGATGCCCAGTTTTCACTATTGCTCTGCCTTGCTTTGACGCAAAGTAACTGTACCATTTCTATCAACTTTGTG
ATC-AAGATTCTCATGGCACCTGTAGCAGTTTCTAAGGCTGTACTTTCGTGCTGCAACATAAATTAGTATTATGAAT-TA
CTTGGCATTAGATGGATTTATCAATTGCATTAATGTCATGCTTTGCTACCAAAACTGATGCAGATCTGGCCAAGCAAATC
GACACTGCTGACACTAATGAGAGACGACTGAACCTCCTGCGAAAATTCTTCTTCTGGCTGGAGGTGATCTATGTTCAACA
TCCTAGTT---GTTCTTTTCTGTCAGTGGTAATGATATCGTTATAGTGGAAGTTAAAACCAGTGATCTCTAAATCGTGTG
AAGTTAATGATTTATCCACCTAG------GGTTTATGGTGGAAGTTCCTTAAGTAGGGA---------------------
--------------------------------------------------------------------------------
-------------------------TACATTGGAATAATACAATTATGCTCCGTATGTGACACTATTATTGCGTGCACAA
AAGGGGAGCTAGTTTAATTTTCTTTCTGTGCATTTTGCATTAGCCAGAGCATAAGATTCTTTCTTTCGACTTTCTGGTAA
CTAGACGATGAATTGCCATGCTAAGCAGCGTTTCGTAAAACCTTAGTGGAGAAAAA-CAAAATTGCTCTTCTCGTGTGTT
TGGCCATGCTAAATAGTCTGCATAGTTGCCCGAACTAAAGCCATGTTTGTTCGCATCGTCTGCAGAACTTATGCCATGAT
GGAGCACACATGCCATGGATCGCCAAGGCGCTGGCCTGCAATCCCATCGCAACAGACGACTGA-----------------
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>chr1D_1_TraesCS1D01G264400
TCGCGGGCGGGCTGGCCCGCCCATTAGCGCCTACGTGGGCCTTCTCTCGGCCTATTCGAACCGAAACGACGGCACTCCGA
CTCCGAGCGGAGCATCT---TCTTCCCGGACCTGTCCCTGCTCGCTGTCCGCTTTCGCTGCTCCTGCCACGGCGAACGCT
GCTGGAGATGAGCCCTAAATCTACAACGGCGGGGAAACTCGCTCGGCGGCAGTAAATCCCCCCCTTGCCGCCGGCCATTA
TCGGAAGGAAGCGGAAAGGGGACCAAACCACCGGTCTCCTCTTCTTCCCGCAGGTAAGCGTAAGCTTCGTTCCCCAAATC
CTCCGCACCTAAACCTACAGTGTTCGACTGGGATTCGGCCGCTGATCGGATCCCCTGCGCTTTTACTGGTTTCTTCTTCC
CTCCGTGCTGCATGCACTTCCTTCTTGTATGCATTGTCTGCAGC----TATTCTGCGATCTGCAGAATGGGGTTTTGTTG
CCCAGGGGGTCCGCATTCCGTTTGTTGCTGTGTGGTATGTGCCCAGCAA-TCTCCGCGGGTTTCCACTCGGATCTTTCAT
TCTAGGGCGATTTTAGTCGCATGCAGTT------------TTGTTTAGTGCGGAGATATGATTCTGGTGCACTGCAGAGA
TCCTACACTGAAACAGAATTTTGTTTCAGTGTTGTATGCTCGATACCAAGTGTTTGCCCATTCTAAATGGGTCAGAATTC
TGAGCCCATTTTCTATCTTGTCATGATAGGAACAGGAGCAGTATCCATGAGTCGTTGTGCGGTGTAGTTCACGAGGATTC
CCAGTGATGGGTTGGGGTTCACTAAATTTGTTCAGTGCTGCCATTGTTTTCTCTTTTT-GTTAGAATGCAGGGTGCGGTT
GCAATGATGTTTCGGTGTAGGTTGTGTGCATGAATCACCTGTTCATTGCTCTCTGAATTTTATGGTAGT---TACTGATA
GGATGGCTGTTGATGCATATATATATATATATAAGCCTTCTTCAATTTTCAGATAATCAGCCAGATGAAGAAACAGAAAA
TGGCGAATGGACCATCACACGACAAGAACAAGGTGTTCGCCAGTTTGACTCACGAAGATGCTTCAGATATTGATCCGTCT
TACAAGATTTTCTTGGAAAATCTTATTGAAGATGGAAGTGCGTATGTGTTTCATATGCCAAATGGGGACCATGGCTTGCC
TGCTTCCATCAGGTATGAAGAGGATGCTATGTCATATGGA------------------GGC------------------A
CAAATGTCCCCAAAAAATTGCCACACACAAGTCGGGGTGGTCCAAATGTCAAGCGACTAGATCAAACATCAG---GCAGG
GCTGTCAATGGAAATGCGGGCCATTCCTTTCTACCAAGGACATTGTCTGTGAAGAACAACACCTCAGAGGTCGATGAATC
TTATGCAGAATTTCTGAGCCTCATGAAGATCAAGGATGGTTTCATGGTTCTTGAGCTGGAACCAGGTGTTACTGTGGTAT
ACGAGCAAGAGGAGAAGACACCCCCTGGATATGATGAATTGAGAACTTTGGTTATGTCTGAACGTGGAATTGACGGGCCT
GCTCCAGAAAATTTGCATGGTCAGGATTTAATCTGCACAGATGAGCATGGACTTGTACCTTGTACTGAATCTTCTGATTT
TAACGTGAGTTTTACTTCTGTTTAGTTTTGTGGGTTATCTCTTTAATGATTCTGTTTTTATCCTGTAACTTTTTAATTTT
TTTTTGTGGCAGGCATCTGAAGAATGTGAAGAAGCACCTATTGCTCTTAGTTGTGGTGCTCCTTCTACATTTGATGAAAA
ACTTGATTCTGTTTTAAGTCAGCCATATGACCAAAATGAATACAAAGAGCTTATGAGAAAAGCCACTGACCAGAAGCCTG
TGAGCAGACAAAGACAATTGCGAAGTGGATCCAAGCGCTATGCCACAGGATTCGTTGGACTGTCGTATCTTGATCACTAC
CCAGGTGGTTACTATATTGTCTATGGGCAACCTTTTAAGCCCGATGGGGTTATTCCGTTCTTGCGCCTTTATTGTGGTTG
TAGTCTAAAAGCTTCATTTTGAACCTTAATTTCAGCGAGGTGTTGATAAGCATTTCTCAAACT-----------------
----------------------GTGCATTTTATGGTCCGGTGCAAATCATAACTGAGTTATGCTCCCAGCATATAGCTTG
ACCAAACCAGTGATTTAATAGCCATGTTGAAATGTTTTCTTCCAAACGGATCACTGTATTCTATTAGAAGTCAGTAATTT
AATCTGTTCATCTCCGGTTTGTATGTAAATAAAGTTATTTATAATAT-----GGATCATAGAACAACAAATCTTGATATT
TAAGTGGCTTGGATTAGCTAGCTGTAGC--------TGTGCCCAGTGAGCTTTCTTCTGTAAACAGACATTTGAAATTTT
AGATGCATGATGCCCAGTTTTCACTATTGCTCTGCCTTGCTTTGACGCAAAGTAACTGTACCATTTCTATCAACTTTGTG
ATC-AAGATTCTCATGGCACCTGTAGCAGTTTCTAAGGCTGTACTTTCGTGCTGCAACATAAATTAGTATTATGAAT-TA
CTTGGCATTAGATGGATTTATCAATTGCATTAATGTCATGCTTTGCTACCAAAACTGATGCAGATCTGGCCAAGCAAATC
GACACTGCTGACACTAATGAGAGACGACTGAACCTCCTGCGAAAATTCTTCTTCTGGCTGGAGGTGATCTATGTTCAACA
TCCTAGTT---GTTCTTTTCTGTCAGTGGTAATGATATCGTTATAGTGGAAGTTAAAACCAGTGATCTCTAAATCGTGTG
AAGTTAATGATTTATCCACCTAG------GGTTTATGGTGGAAGTTCCTTAAGTAGGGA---------------------
--------------------------------------------------------------------------------
-------------------------TACATTGGAATAATACAATTATGCTCCGTATGTGACACTATTATTGCGTGCACAA
AAGGGGAGCTAGTTTAATTTTCTTTCTGTGCATTTTGCATTAGCCAGAGCATAAGATTCTTTCTTTCGACTTTCTGGTAA
CTAGACGATGAATTGCCATGCTAAGCAGCGTTTCGTAAAACCTTAGTGGAGAAAAA-CAAAATTGCTCTTCTCGTGTGTT
TGGCCATGCTAAATAGTCTGCATAGTTGCCCGAACTAAAGCCATGTTTGTTCGCATCGTCTGCAGAACTTATGCCATGAT
GGAGCACACATGCCATGGATCGCCAAGGCGCTGGCCTGCAATCCCATCGCAACAGACGACTGACCGAGAACCGGAACAGA
TACGGGTTGTCCAAGATGCCGCGAGATTGAATGAAAAACAGGCAGTGTGCACATCGACGCATTAACTCCTCGATCGGTAG
CTATGTAGATATGTCAAGCATGTACTTTTGTTGCGCGGCCGCATGTAAGTAGCCTCGTATATGCTGCTTTGGGTTTGTGA
TTTAGCCAGGTCTCTGTGTGATCTTCGGTGTTCTCTATGGTGCTATGGATATTTGTTTCTTAGTAACAGTTTCTGTAGAC
AAATAATTTGCAATACGATG-TATTGATTTGGGGTGCTGGTGCACGCATATATAATATAAGGGAAGGCCTCTATCTCAAC
TATACAAGACTAGGAGGTGGGCCACAACTCCAATACACGTGCAGTACAAAATACATACTCAACAC-CCCCCGC-AGTCGA
AGCGTTGCCGGAGACACGGAGACTGGACCGAAACTCCTCAAAGACGGGAGTAGGCAATCCCTTAGTCATCACATCAGCAA
ACTGTTGCGTCGTCGGCACGTGGAGAACCCGAACACGTCCAAGGGCAACCTGCTCGCACACGAAGTGAATATCGAGCTCA
ATATGCTTCGTCCGTCGATGGTGCACCGGGTTGGCGGAGAGGTAGACCGCGATGACGTTATCGCAGTAGACAAGAGTGGC
CTTGTGAACATCACAAAGCAACTCCTGGAGCAACTGACATATCCAAGAGCATTCGGCCACGGCATTAGCCACGGCGCAAT
ACTCTGCCTCGGCGCTGGAGCGGGAGACCGTGGGCTGCCGCTTCGATGACCAGGAGATCAACGAGGGCCCAAGGTAGACG
CAGTAGCCTGACGTAGAGCGTCGCGTGTCGATGCAGCCAGCCCAGTCGGCATCCGAGTAGGCCACGAGGTCGGTGGAGGC
GGAGGCCGTCAGGGTGAGTCCCAAGAACATGGTGCCGCGTATGTAACGGAGAATACGCTTCACCAGAGTCCAGTGAGAGT
CACGCGGGGCGTGCATATGGAAACAC
>chr1B_3
--GCCGGCTGGCTGGCTGGCCCATTAGCGCCTACGTGGGCCTTCTCTCGGCCTATTCGAACTGAAACGACGGCACTCCGG
CTCCGAGCGGAGCATCTTCTTCTTCCCGGACTTGTCCCTGCTCGCTGTCCGCTTTCGCTGTTCCTACCACGGCGAACGCT
GC-----------CCTAAATCTACAACGGCGGGGAAGCTCGCTCGGCAGCAGTAAAT-CCCCCCTTGCCGCCCGCCATTA
TCGGAAGGAAGCGCAAAGGGGACCAAACCACCGGTCTCCTCTTCTTCCCGCTGGTAAGCGTAAGCTTCGTTCCCCAAATC
CTCCACACCTAAATCTACAGTGTTCGACTGGGATTCGGCCGCCGATCGGATCCCCTGCGCTTTTACTGGTTTCTTCTTCC
CTCCGTGCTGCATGCACTTCGTTCCAGTATGCATTGCCTGCAGT----TATTCTGCGATCTGCGGAATGGGGTTTTGTTG
CCCAGGGG-TCCGCATTCCGTTTGTTGCTTTGTGGTGTGTGCCCAGCAA-TCTCCGCGGGTTTCCGCTCGGATCTTTCGT
CCTAGGGCGATTTTAGTCGCATGCAGTTCTAGTGGTAGTTTTGTTCGGTGCGGAGATATGGTTCTGGTGCACTGCAGAGA
TCCTACACTGAAACAGAATTTTGTTTCAGTGTTGTATGCTCGATACCAAGTGTTTGTCCATTCTAGAT-GGTCAGAATTC
TGAGCTCATCCTCTATCTTGTCATGGTAGGAACAGGAGCAGTATCCATGAATCGTTGTGCGGTGTAGTTCACGAGGATTC
CCAGTGATGAGTTGGGGTTCGCTAAATTTGTTCAGTGC---CATTGTTTTCTTTTTTTCGTTAGAATGCAGGGTGCGGTT
GCAATGATGCTTCGGTGTAGGTTGTGTGCATGAATCACCTGTTCATTGCTCTATGGATTTTATGCTAGT---TACTGATA
CGATGGCTGTTGATGCATATATATA---ATATAAGCCTTCTTCAATTTTCAGATAATCAGCCAGATGAAGAAACAGAAAA
TGGCGAATGGACCATCACACGACAAGAACAAGGTGTTCGCCAGTTTGACTCGCAAAGATGTTTCAGACATTGATCCGTCT
TACAAGATTTTCTTGGAAAATCTAATTGAAGATGGAAGTGCGTATGTGTTTCATATGCCAAATGGGGACCATGGCTTGCC
TGCTTCTGTCAGGTATGAAGAGGATGATATGTCATATGGA------------------GGCGTGAATGTCAGAGACGGCA
CAAATGTCCCCCAAAAATTGCCACACACAAGTCGGGGTGGTGCAAATGTCAAGCGACTAGATCAAACATCAG---GC---
GCTGTCGATGTAAATGCGGGCCATTCCTTTCTACCAAGGACATTGTCTGTGAAGAAGAACACCTCAGAGGTTGATGAATC
TTATGCAGAATTTCTGAGCCTCATGAAGATCAAGGATGGTTTCATGGTTCTTGAGCTGGAACCAGGTGTTACTGTGGTAT
ATGAGCAAGAGGAGGAGACACCCCCTGGATATGATGAATTGAGAACTTTGGTTATGTCTGAACATGGAATTGACGGGCCT
GCTCCAGACAATTTGCATGGTCAGGATTTAATCTGCACAGATGAGCATGGACTTGTACCTTGTACTGAATCTTCTGATTT
TAACGTGAGTTTTACTTCTGCTTAGTATTGTTGGTTATCTCTTTAATTATTCTGTTTTTAGCCTGTAATTTTTTTATT--
---TTGTGGCAGGCATCTGAAGATAGTGAAGAAGCACCTATTGCTCTTAGTTGTGGTGCTCCTTCTACATTTGATGAAAA
ACTTGATTCTATTTTAAGTCAGCCATATGACCAAAATGAATACCAAGAGCTTATGAGAAAAGCCACTGACCAGAAGCCTG
TGAGCAGACAAAGACAATTGCGAAGTGGATCCAAGCGCTATGCCACAGGATTCGTTGGACTGTCGTATCTTGATCACTAC
CCAGGTGGTTACTATATTGTCTATGGGCAACCTTTTAAGCCTGATGAGGTTATTCCGTTGTTGCGCCTTTATTGTGGTTG
TAGTCTAAGAGCTTCATTTTGAAGCTTCATTTCAGCGAGGTGTTGATAAGCATTTCTCAAACT-----------------
----------------------GTGCATTTTATGGTCCAGTGCAAATCATAACTGAGTTATGCTCCCAGCATATAGCTTG
ACCAAACCAGTGGTTTAACAGCCATGTTCACATGTTTTCTTCCAAACGGATAACTGAATTCTATTAGAAGTCACTAATTT
AATCTGTTCATCACCGGTTCGTGTGTAAATAAAATTATTTATAACAT-----GTATCATAGGACAAAAAATCTTGATATT
TAAGTGGCTTGGATTAGC----TGTAGCTGCTTTATTGTGCCCAGTGAGCTTTCTTCTGTAAACAGACATTTGAAATTTT
AGATGCATGATGTCCAGTTTTCACTATTGCTCTGCCTTGCTTTGACGCAAAGTAACTGTACCACTTTTATCAACTTTGTG
ATC-AAGATTCTCATGGCGCCTGTAGCAGTTTCTAAGGCTATACTTTCGTGCTGCAACATAAATTAGTATTTTATGAATT
ACTTGG---AGATGGATTTGTCAATTGCATTAATATCGTGCTTTGCTACCAAAATTGATGCAGATCTGGCCAAGCAAATC
GACACTGCTGACACTGATGAGAGACGACTGAACCTCCTGCGAAAATTCTTCTTCTGGCTGGAGGTGATCTATATTCACCA
TCCTAGTTATTGTTCTTTTCTGTCAGTAGTAAGGATATCA-TATAGTGGAAGTTAGAATTAGTGATTTCTAAATGGTCTG
AAGTTAATGA-TTTCCCCAGCTAAGCTAAGGTTCATAGTGGAAGCTCCTTAGGCAAGGA---------------------
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-------------------------TACGTTGAAAAAACACAATTAT---------------------------------
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------------------------------CTATGTAACATTTTGGTAGAGAAAACCCAAACTTGCTCTTCTCCTGTGTT
TGGCCATGCTAAAAACACTACATAGTTACCCGGGCTATAGCCATGTTTGTTCGCATTGTCTGCAGAACTTATGCCATGAT
GGAGCACACATGCCATGGATCCCCAAGGCGCTGGCCTGCAATCCCATCGCAACAGACGACTGACCGAGAACCGGAACAGA
TACGGGTTGTCCAAGATGCCACAAGACTGAAGGAGAAACAGGCAGGGTGCACATCGATGCAGCAACTCCTGGATCGGTGG
CCATGTAGATATGTCAAGCATGTACTTTTGTTGCGCAGCTGCAAGTAAGTAGCCTCGTATATGCTGCTTTGGGTTTGTGA
TTTAGCCAGATCTGTGTGTGATCTTCGGTGTTCTCTATGGTCCTATGGATATTT--------------------------
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>chr1A_3
--GCGGGCTGGCTGGCCGGCCCATTAGCGCCTACGCGGGCCTTCTCTCGGCCTATTCGAACCGAAACGACGGCACTCCGA
CTCCAAGCGGAGCATCT---TCTTCCCGGACCTGTCCCTGCTCGCTGTCCGCTTTCGCTGTTCCTACCACGGCGAACGCT
GCTGGAGATGAGCCCTAAATCTGCAACGGCGGGGAAGCTCGCTCGGCGGCAGTAAATCCCCCCCTTGCCGCCCGCCATTA
TCGGAAGGAAGCGGGAAGGGGACCAAACCACCGGTCTCCTCTTCTTCCCGCAGGTAAGCGTGAGCTTCGTTCCCCAAATC
CTCCACGCCTAAACCTACAGTGTTCGACTGGGATCCGGCCGCCGATCGGATCCCCTGCGCTTTTACCGGTTTCTTCTTCC
CTCCGTGCTGCATGCACTTCCTTCTTGTATGCATTGTCTGCAGTTAGTTATTCTGCGATCTGCGGAATGGGGTTTTGTTG
CCCAGGGG-TCCGCATCCCGTTTGTTGCTGTGCGGTGTGTGCCCGGCAAATCCCCGCGGGTTTCTGCTCGGATCTTTCAT
CCTAGGGCGATTTTAGTCGCATGCAGTTCCAGTGGCAGCTTTGTTTGGTGCGGAGATATGATTCTGGTGCGCTCCAGAGA
TACTACACTGAAACAGAATTTTGTTTCAGTGTTGTGTGCTCGATACCAAGCGTTCTTCCAGTCTAAAT-GGTCAGAATCC
TGAGCTCATCTTCCATCTTGCCATGGTT------GGAACAGTATCCATGAATTGTCATGCGGTATATACAGTCCACATAC
CTGGTGATGAATTGGGGTTCACTAAATTTGTTCAGCGC---CATTGGGTTTCTA--TT-GCTAGATTGCAGGGTGCAGTT
GCCATGATGTTTCAGTGTAGGTTATGTGCATGAATCACCTGCTCATTGCTCTTTGGATTTTTATGGTAGTTATATTGATA
GGATGACTGTTGATGCATATG-------ATATAAGCCTTCTTGAATCTTCAGGTAATCAGCCAGATGAAGAACCAGAAAA
TGGCGAATAGATCGTCACGCGACAACAACAAGGTGTTCGCCAGTTTGACTCGCAAAGATGATTCAGATATTGATCCGTCT
TACAAGATTTTCTTGGAAAATCTAATTGAAGATGGAAGTGCGTATGTGTTTCATATGCCAAATGGGGACCATGGCTTGCC
TGCTTCCATCAGGTATGAAGAGGATGTTATGCCATATGGAGCCGCAAATGCCAGAGACGGC------------------A
CAAATGTCCCCAAAAAATTGCCACACACAAGTCGGGGTGGTCCGAACGTCGACCGACTAGATCAAACATCAGGCAGC---
GCTGTCAATGTAAATGCGGGCCATTCCTTTCTCCCAAGGACATCGTCTGTGAAGAAGAACACCTCAGATGTTGATGAATC
TTACGCAGAATTTCTGAGCCTCATGAAGATCAAGGATGGTTTCATGGTTCTTGAGCTGGAACCAGGTGTTACTGTGGTAT
ATGAGCAAGAGGAGGAGACACCCCCTGGATATGATGAATTGAGAACTGTGGTTATGTCTGAACGTGGAATTGACAGGCCT
GCTCCAGACAATTTGCATGGTCGGGATTCAATCTGCACAGATGAGCATGGAGTTGTACCTTGTACTGAATCTTCTGATTT
TGAGGTGAGTTCTACTTCAGTTCAGTTTTGTGGGTTATCTATTTAATTATTCTGTTTTTATTCCATAATTTGGT--TT--
---TTGCGGCAGGCATGTGAAGATTGTGAAGAAGAACCGCTTGCTCTTAGTTGTGGTGCTCCTTCTACATTTGATGAAAA
ACTTGATTCTGTTTTAAGTCAGCCATATGACCAAAATGAATACGAAGAGCTTATGAGAAAAGCCACTGACCAGAAGCCTG
TGAGCAGACAAAGACAATTGCGAAGTGGATCCAAACGCTATCCCACAGGATTCGTTGGACTGTCGTATCTTGATCACTAC
CCAGGTGGTTACTATATTGTGTATGGGCAACCTTTTTAGCCTGATAGGGTTATTCCGTTGTTGCGCCTTTCTTGTGGTTG
TAGTCTAAGAGCTTCATTTTGAACCTTGATTTCAGTGAGGTGTTGATAAGCATTTCTCAAACTTCCGTTTAAAAAAATAA
AAATATAAGCATTTCTTAAACTGTGCATTTTCTGGTCTGGTACAAATTGTAACTGATTTATGCTCC--------------
------------------TAGCCATGTTCAAATGTTTTCTTCCAAATGGATCACTGAACTCTATTAAAAGTCATGAATTT
AATCTGTTCATCACCATTTCGTATGTAAGCAAAATTATTTATAACATGTACAGTATCATAGAACAAAGAATCTTGATATT
TAAGTGGCTTGGGTTAGCTAGCTGTTGCTGCTTTATTGTGCCCAGTGAGCTTTCCTCTATAAACAGTCATTTGAAACCTT
GGATGCATGATGCCTAGTTTTCACTATTGCTCTGCCTTGCTTTGAAACAAAGTAACTATAGCATTTCCATCAACGTTGTG
GTCAAAGATTCTCATGGTGCCTGTAGCAGTTTCGAAGGCTGTACTTTCGTGCCGCAACATAAATTAGTATTTTATGAATA
CTTGGCATTAGATGGATTTGTCAATTGCATTAATATCGTGCTTTGCTACCAAAACTGATGCAGATCTGGCCAAGCAAATC
GACACTGCTGACACTAATGAGAGACGACTGAACCTCCTGCGAAAATTCTTCTTCTGGCTGGAGGTGATCTTTGTTCACCA
TCCTAGTTATTCTTCTTTTCTGTCAGTAGTAATGATATCA-TATAGTGGAAGTCAGAATCAGTGATTTCTAAATGGTCTG
AAGTTAATGGTTTTGCCCGGCTGAGCGAAGGTTTATAGTGGAAGCTCCTTAAGTAGGGAGATACTCCTCCATCCCAAAAT
TCTTGTCTTAGATTTGTCTAAATACGGATGTATCAAGTCACGTTTTAGTATTAGATACATCCGTATCTAGACTAATCTAA
GACAAGAATTTTGGGACGGAGGGAGTACATTGGAAAAATACAACTAC---------------------------------
--------------------------------------------------------------------------------
------------------------------TTATGTAACATTTAAGTAGAGAAAAACAAAAATTGCTCTTCTCCTGTGTT
TGGCCATGCTAAAAACACTACATTGTTACCCGAACTAAACCCGTGTTTGTTCGCATTGTCTGCAGAACTTATGCCATGAT
GGAGCACACATGCCATGGATCCCCAAGGCACTGGCCTGCAATCCCATCGCACCAGATGACTAACCGAGAACCGGAACAGA
CA-GGGTTGTCCAATATGCTGCGAGACTGGAGGAAAAACAGGCAGGGTGCAGGTCGATGCAGCAACTCCTCGATCGGCAG
CTATGTAAATATGTCAACCATGTACTTTTGTTGTGCGGCCGCATGTAAGTAGCCTCGTATGTGCTGCTTTGGGTTTGTGA
TTTAGCCAGATCTGTGTGTGATCTTCGGTGTTCTCTATGGTGCTATGGACGTTTGTTTCTTAGCAGTTTCT---------
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>chr1D_3417
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---------------------------------------------------------------------TTTGTGTGGAT
AGATGATTTGCAATACGATG-TATTGA-TCGGGGTGCTGGTGCACGTATATATAATACAAGGGAAGGCCTCTACCTCAAC
TATACAAGACTAGGAGGTGGGCCACAACTTCAATACACGTGCAATACAAAATATATACTCAACAC-CCCCCGC-AGTCGA
AGCGTCGCTGGAGACACAGAGACTGGACCGAAACTCCCCCAAGACGGGAGTAGGCAATCCCTTAGTCATCACATCAGCAA
ACTGTTGCGTCGTCGGCACGTGGAGAACCCGAACACGGCCAAGGGCAACCTGCTCGCGCACGAAGTGAATATCGAGCTCA
ATATGTTTCGTCCGTCGATAGTGCACCGGGTTGGCGGAGAGGTAGACCGCGCTGACGTTGTCGCAGTAGACAAGAGTGGC
CTTGTGAACATCACAAAGCAACTCCTGGAGCAGCTGACGTATCCAAGAGCACTCGGCCACGGCATTAGCCACGGCGCGAT
ACTCTGCCTCGGCGCTGGAGCGGGAGACCGTGGGCTGCCGCTTCGATGACCAAGAGATCAACGAGGGCCCAAGGTAGACG
CAGTAGCCGGACGTAGAGCGTCGCGTGTCGGGGCAGCCAGCCCAGTCAGCATCCGAGTAGTCCACGAGGTCGGTGGAGGC
GGAGGCCGTCAGGGTGAGTCCCAAGGTCATGGTGCCGCGTATGTAACGAAGAATACGCTTCACCAAAGTCCAGTGAGAGT
CACGCGGGGAGTGCATATGGA-----
>chr3B_3418
TTCTTG--------------------------------------------------------------------------
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---------------------------------------------------------------------------TAGAG
AAATGATTTGCAATACAA-T-TATTGA-CTGGGGTACTGATGCACGCATATATAATACAAGGGAAGACCTCTACCTAAAC
TATACAAGACTAGGAGGTGGGCCACAACTCCAATATACGTGCAGTACAAAATACATACTCAACAC-CCCCCGC-AGTCGA
AGCGTCGTCGGAGACACAGAGACTGGACCGAAACTCCTCGAAGACGGGAGTAGGCAATCTCTTAGTCATCACATCAGCAA
ACTGTTGCGTCGTCGGCACGTGGAGAACCCGAACACGGCCAAGAGCAACCTGCTCGCGCACGAAGTGAATATCGAGCTCA
ATATGCTTCGTCCGTCGATGGTGCACCGGGTTGGCGGAGAGGTAGACCGCGCTGACGTTATCGCAATAGACAAGAGTGGC
CTTGTGAACATCACAAAGCAACTCCTGGAGCAGCCGACGTATCCAAGAGCATTCGGCCACGGCATTAGCCACGTCGCGAT
ACTCTGCCTCGGCGCTGGAGCGGGAGACCGTGGGCTGCCGCTTCGATGACCAAGAGATCAACGAGGGCCCAAGGTAGATG
CAGTAGCCTGACGTAGAGCGTCGCGTGTCGGGGCAGCCAGCCCAGTCGGCATCCGAGTAGGCCACAAGGTCGGTGGAGGC
GAAGGCCGTCAGGGTGAGTCCCAAAGACATGGTGCCGCGTATGTAACGGAGAATACGCTTCACCAGAGTCCAGTGAGAGT
CACGCGGGGTGTGCATATGGA-----
>chr3D_3420
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------------------------------------------------------------------------CTGTAGAC
AGATGATTTGCAATACGA-T-GATTGA-TTGGGGTGCTGGTGCACGCATATATAATACAAGGGAAGGCCTCTACCTCAAC
TATACAAGACTAGGAGGTGGGCCACAACTCCAATATGCGTGCAGTACAAAATACATACTCAACAC-CCCCCCGTAGTCGA
AGCGTCGCCGGAGACACAGAGACTGGACCGAAACTCCTCGAAGATGGTAGTAGGCAATCCCTTACTCATCACATCAGCAA
ACTGTTGCGTCGTCGGCACGTGGAGAACCCGAACACGACCAAGGGCAACCTGCTCGCGTACGAAGTGAATATCGAGCTCA
ATATGCTTCGTCCGTCGATGGTGCACCGGGTTGGCGGAGAGGTAGACTGCGCTGACGTTATCGCAGTAGACAAGAGTGGC
CTTGTGAACATCACAAAGCAACTCCTGGAGCAGTTGACGTATCCAAGAGCACTCGGCCACGACATTAGCCACGACGCAAT
ACTCTGCCTCGGCACTGGAGCGGGAGACCGTGG-CTGCCGCTTCAAAGACCAAGAGATCAACGAGGGCCCAAGGTAGACG
CAGTAGCGTGACGTAGAGCGTCGCGTGTCGGGGCAGCCAGCCCAGTCGGCATCCGAGTAGGCCACGAGGTCGGTGGAGGC
GGAGGCCGTCAGGGTGAGTCCCAAAGACATGGTGTCGCGTATGTAACAGAGAATACGCTTCACCAGAGTCCAGTGAGAGT
CACGCGGGGCGTGCATATGGA-----
>chr1D_3421
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-------------------------------------------------------------------------TGTAGAC
AGATAATTTGCAATACGA-T-GATTGA-TTAGGGTGCTGGTGCACGCATATATAATACAAGGAAAGACCTCTACCTCAAC
TATACAAGACTAGGAGGTGGGCCACAACTCCAATACACGTGCAGTACAAAATACATACTCAACAC-CCCCCGC-AGTCGA
AACGTCGCCGGAGACACAGAGACTGGACCGAAACTCCTCGAAGACGGGAGTAGGCAATCCCTTAGTCATCACATCAGCAA
ACTGTTGCGTCGTCGGCACGTGAAGAACCCGAACACGGCCAAGGGCAACCTGCTCACGCACGAAGTGAATATCGAGCTCA
ATATGCTTCGTCCGGCGATGGTGCACCGGGTTGGCGAAGAGGTAGACCGCGCTGACGTTATCGCAGTAGACAAGAGTGGC
CTTGTGAACATCACAAAGCAACTCCTGGAGTAGCTGACGTATCCAAGAGCACTCGGCCACGGCGTTGGCCACGACGCGAT
ACTCTGCCTCGGCGCTGGAGCGGGAGACCGTGGGCTGCCGCTTCGATGACCAAGAGATCAACGAGGGCCCAAGGTAGACG
CAGTAGCCTGACGTAGAGCGTCGCGTGTCGGGGCAGCCAGCCCAGTCAGCATCCGAGTAGGCCACGAGGTCGGTGGAGGA
GGAGGCCGTCAGGGTGAGTCCCAAGGACATGGTGCCGCGTATGTAACGGAGAATACGCTTCACCACAGTCCAGTGAGAGT
CACGCGGGGCGTGCATATG-------
>chr1D_3421
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-------------------------------------------------------------------------TGTAGAC
AGATAATTTGCAATACGATG-TATTGA-TTGGGATGCTGGAGCACGCATATATAATACAACGGAAGGCCTCTACCTCAAC
TATACAAGACTAGGAGGTGAGCCACAACTCCAATACACGTGCACTACAAAATACATACTCAACAC-ACCCCGC-AGTCGA
AGCGTTGCCGGAGACACAGAGACTGGACCGAAACTCTTCAAAGACGGGAGTAGGCAATCCCTTAGTCATCACATCAGCAA
ACTGTTGCGTTGTCGGCACGTGGAGAGCCCGAACACGTCCAAGGGCAACCGGCTCGCGCATGAAGTGAATATCGAACTCA
ATATGCTTCGTCCGTCGATGGTGCACCGGGTTGGCGAAGAGGTAGACCGCGCTGACGTTATCATAGTAGACAAGAGTGGC
CTTGTGAACATCACAAAGCAACTCCTGGAGCAGCTGACGTATCCAAGACCACTCGGCCACAGCATTGGCCACGACGCGAT
ACTCTGCCTAGGCGCTGGAGCGGGAGACCGTGGGCTGCCACTTCGATGACCAAGAGATCAACGAGGGCCCAAGGTAGACG
CAGTAGCCTGACGTAGAGCGTCGCGTGTCGGGGCAGCCAGCCCAGTCAACATCCGAGTAGGCCACGAGGTCGGTGGAGGC
GGAGGCCGTCAGGGTGAGTCCCAAGGACATGGTGCCTCGTATGTAACGGAGAATACGCTTCACCAGAGTCCAGTGAGAGT
CACGCGGGGCGTGCATATGGA-----
>chr1B_3421
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-------------------------------------------------------------------------TGTAGAC
AGATGATTTGCAATACGATT-GATTGA-TTGGGGTGCTGGTGCACGCATATATAATACAAAGGAAGGCCTCTATCTCAAC
TACACAAGACTAGGAGGTGGGTCACAACTCCAATATACATGCAATATAAAATACATACTCAACACCC-CCCGC-AGTCGA
AGCGTCGCCGAAGACACAGAGACTGGACCGAAACTCCTCGAAGACAGGAGTAGGCAATCCATTAGTCATCACATCAGCAA
ACTGTTGCGTCGTCGGCACGTGGAGAACCCGAACACAGCCAAGGGCAACCTGCTCGCGCACGAAGTGAATATCGAGCTCA
ATATGCTTCGTCCGTCGATGGTGCACCGGGTTGGCAGAGAGGTAGACCGCGCTGACATTATCGCAGTAGACAAGAGTGGC
CTTGTGAACATCACAAAGCAACTCCTGGAGCAGCTGACATATCCAAGAGCACTCGGCCACGGCATTAGCCACGACGCGAT
ACTCTGCCTCGGCGCTGGAGCGGGAGACCGTGGGCTGCCGCTTCAATGACCAAGAGATCAACGAGGGCCCAAGGTAGACG
CAGTAGCCTGACGTAGAGCGTCGCGTGTCGGGGCAGCCAGCCCAGTCGGCATCCGAGTATGCCACGAGGTCGGTGGAGGC
GGAGGCCGTCAGGGTGAGTCCCAAAGACATGGTGCCGCGTATGTAACGGAGAATGCTCTTCACCAGAGTCCAGTGAGAGT
CACGCGGGGCGTGCATATGGA-----
>chr2A_3421
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-------------------------------------------------------------------------TGTAGAC
AGATGATTTGCAATACGA-T-GATTGA-TTGGGGTGCTGGTGCACGCATATATAATACAAGGGAAGACCTCTACCTCAAC
TACACAAGACTAGGAGGTGGGCCACAACTCCAATATACATGCAGTACAAAATACATACTCAACACCCCCCTGC-AGTCGA
AGCGTCGCCGGAGACACAGAGACTGGACCGAAACTCCTCGAAGACGGGAGTAGGCAATCCCTTAGTCATCACATCAGCAA
ACTGTTGCGTCGTCGGCACGTGGAGAACCCGAACACGACCAAGGGCAACCTGCTCGCGCACGAAGTGAATATCGAGCTCA
ATATGCTTCGTCCGTCGATGGTGCATCGGGTTGGCGGAGAGGTAGACCGCGCTGACGTTATGACAGTAGACAAGAGTGGC
CTTGTGAACATCACAAAGCAACTCCTGGAGCAGCTGACGTATCCAAGAGCACTCGGCCACAGCATTAGCCACGTCGCGAT
ACTCTGCCTCGGCGCTGGAGCGGGAGACCGTGGGCTGCCGCTTCGATGACCAAGAGATCAATGAGGGCCCAAGGTAGACG
CAGTAGCCTGACGTAGAGCGTCGCGTGTCGGGGCAGCCAGCCCAGTCGGCATCCGAGTATG-CACGAGGTCGGTGGAGGC
GGAGGCCGTCAGGGTGAGTCCCAAAGACATGGTGCCGCGTATATAACGGAGAATACGCTTCACCAGAGTCCAGTGAGAGT
CACGCGGGGCGTGCATATGGA-----
>chr5D_3421
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-------------------------------------------------------------------------TGTAGAC
AGATAATTTGCAATACGA-TATATTGA-TTGGGGTGCTGGTGCACGCATATATAATACAAGGGAAGGCCTCTACCTCAAC
TATACAAGACTAGGAGGTGGGCCACAACTCCAATACACGTGCAATACAAAATATATAGTCAACACTCCCCCGC-AGTCGA
AGCGTCGCTGGAGACACGGAGACTGGACCAAAACTCCTCGAAGACGGGAGTAGGCAATCCCTTAGTCATCACATCAGCAA
ACTGTTGCGTCGTCGGCACGTGGAGAACCCGAACACGGCCAAGGGCAACCTGCTCGCGCACGAAGTGAATATCAAGCTCA
ATATGTTTCGTCCGTCGATGGTGCACCGGGTTGGCGGAGAGGTAGACCGCGCTGACGTTGTCGCAGTAGACAAGACTGGC
CTTGTGAACATCACAAAGCAACTCCTGGAGCAGTTGACGTATCCAAGAGCACTCGGCCACGACATTAGCCACGGCGCGAT
ACTCTGCCTCAGCGCTGGAGCGGGAGACCGTGGGCTGCCGCCTCGATGACCAAGAGATCAACGAGGGCCCAAGGTAGACG
CAGTAGCCTGACATAGAGCGTCGCGTGTCGGGGCAGCCAGCCCAGTCAGCATCCGAGTAGGCCACGAGGTCGGTGGAGGC
GGAGGCCGTCAGGGTGAGTCCCAAGGACATGGTGCCACGTATGTAACGGAG--TACGCTTCACCAAAGTCCAGTGAGAGT
CACGCGGGGCGTGCATATGGA-----
>chr3D_3446
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------------------TG-TATTGA-TTGGGGTGCTGGTGCACGCATATATAATACAAGGGAATGCCTCTACCTCAAC
TATACAAGACTAGGAGGTGGGCCACAACTCCAATACACGTGCAGTACAAAATACATACTCAACACCC-CCCGC-AGTCGA
AGCGTCGCCGGAGACACAGAGACTGGACCGAAACTCCTCGAAGACGGGAGTAGGCAATCCCTTAGTCATCACATCAGCAA
ACTGTTGCGTCGTCGGCACGTGGAGAACCCGAACACGGCCAAGGGCAACCTGCTCGCGCACGAAGTGAATATCGAGCTCA
ATATGCTTCGTCCGTCGATGGTGCACCGGGTTGGCGGAGAGGTAGACCGCGCTGACGTTATCGCAGTAGACAAGAGTGGC
CTTGTGAACATCACAAAGCAACTCCTGGAGCAGCTGACGTATCCAAGAGCACTCGGCCACTGCGTTGGCCACGGCGCGAT
ACTCTGCCTCGGCGCTGGAGCGAGAGACCGTGGACTGCCGCTTCGATGACCAAGAGATCAACGAGGGCCCAAGGTAGACG
CAGTAGCCTGACGTAGAGCGTCGCGTGTCGGGGCAGCCAGCCCAGTCAGCATCCGAGTAGGCCACGAGGTCGGTGGAGGC
GGAGGCCGTCAGGGTGAGTCCCAAGGACATGGTGCCGCGTATGTAACGGAGAATACGCTTCACCAGAGTCCAGTGAGAGT
CACGCGGGGCGTGCATATGGA-----
>SNPs
-S------S--------S--------------------------------------------------------------
------------------------------------------------------------S----S--------------
------------------------------------S-----------------------------------S-------
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----S-------------------------------------S-------------------------------------
-------------------------------------------S-------------------S----------------
--------S---------------------------S----------------------------S--------------
S---------------------------------------------S---------------------------------
--------------------------------------------------------S-----------S-----------
-----S---S---------------S------------------------S-----------------------------
---------S----------------------------SSS-----------S---------------------------
----------------------------------------------------S--S------------------------
-------------------------SSS----------------------------------------------------
---------------------------------------------------S-S------S-------------------
-----------------------S--------------------------------------------------------
--------------------------S-----------------------------------------------------
-----------------------------------------------------------------------------SSS
----------S---------------------------------------------S--------------S--------
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-S------------S-----------------------------------------------------------------
--------S-----------------------------------------------------------------------
-----------------------------------------------S--------------------S-----S---SS
SSS--------------------S--------------------------------------------------------
-------------------------------------------S------------------------------------
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-----------------------------------------S-----------------S--------------------
--------S------------------S----------------------------------------------------
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------------S---------------S---------------------------S----------------S------
------------S------S-------------S----------S--------S------------S-------------
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------------------S----------------------------------------------------S-SSSS---
-------------------S--------------S--S------------------------------------------
-----------------------------------------------------------------------------S--
---------------------------S-----------SS--------------S--S-------S-------S--S--
-------------SS--SSSSS--------------S-------S-----------------------------------
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-----------------------------------S-----------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--SS----S-SS-----S-------------------------S------
-------------S-SS--S-------S----------------------------S-----------------------
---------------------S----------------------------------------------------------
--------------------------S----S-------------S-----------S---SS-----------------
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---------S---S-------------------------------------------------S-SSSS-----------
---------------------------S-----------------------------S----------------------
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---------------------------------------------------------S----------------------
---------------------------------------------------S----------------------------
--------------------------------S-----------------------------------------------
----------------------------------------------------S---------------------------
------------------------------SS------------------------------------------------
-------------------------S------------------------------------------------------
---------------------SSSSS
>forward_325
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-----------------------------------------------------------------TTCGTTCCCCAAATC
CTCCG---------------------------------------------------------------------------
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>reverse_1359
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------------------------------------------------------------------------------GG
GCTGTCAATGGAAATGCG--------------------------------------------------------------
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>forward_1094
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----------------------------------GTTCGCCAGTTTGACTCACG--------------------------
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>reverse_3211
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----------AATTGCCATGCTAAGCAGCG--------------------------------------------------
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>forward_1784
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----TGTGGCAGGCATCTGAAGAA--------------------------------------------------------
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>reverse_3216
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---------------CCATGCTAAGCAGCGTTTCG---------------------------------------------
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>forward_3126
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------------------------------------------------------------------TATTGCGTGCACAA
AAGGGG--------------------------------------------------------------------------
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>reverse_4346
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-------------------------AACATGGTGCCGCGTATGTA-----------------------------------
--------------------------
