>input_sequence_36689
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------------------------------------------------------------------------------AT
GGAGTTATCCATTTCCATGGGAGGCTCTGCTGTGGCAACGGGCCTCGTGAATCTCAAGGTACACCCGCTCCCCCCCGCCC
CCTCTCTCCGATGCTACCTTCTTGAGGGGTGCTTTATGTATCCTTGCCTAGGGTTTAAGGCG---TGATGTGAATTATTA
TGTTGGGGAA----------------------------------------------------------------------
--------------------------------------------------------------------------------
----------GTTGGTACTTTTTACTT-GCGCAGTTCATTGCAATTGAAGAGAATGGTTAGCATTGGGGTGATATATTTT
CCTGTCCGAGATAGTGGTTGGCTTAAAAAAAG-CCAGCTCTTAAATTTTACCTCA---AAACTTGTGAAGAATTTTGGGT
TCAGTGATTAGAAGTAGAACTCACGATGGAATTTGCACAAGAGAGAAGATATTCAGAGGTTTTAGTCTTTGTTTTGTTCC
TTTCTCAGCCTTGGCATTAAGAGGGTTAAACAAACGCACCTG----CGGGTGCTGTTGTTTAATTCAGCACAATGTAAGG
TATGTAGAAAAATGTATGTTATGTTCAGACAGGCAA--------GCACACTAATGGATTATATAGGACACTTTGCATTAA
ATTTCGCTCAAGGAAGGGGAGAAAACAATCTGGATGTAGGCATCCAATCCATTATCTCGCTGTTCATTCCTTAGAGTTAT
GTTCAATGCTTTAGCTTACTCATGCGAAATCGCAATCA-AAATTTGTGGATTGTTTTGCAGATGGTGAATCACAAATGCA
CCAGGGGCCTTGGACGTCAACTTCAGTTTTCACATGATGTACCATCTTCTGTGTGCCTGATGATATTTAACAAAGAATTC
TCAAAACGGTAGGTGGCTGTTGCTTACTCGGATCATTGACGGTCTTAAAATGA-TTATTCCTTTAATGTTCGATCGTACT
GAGAGAGTACTACCTAGTACTGCTTAGTGCTTTGCACTAATGGATTGCTTCACTGTCCATAGTTGCTTATGAATTTGTTT
TCCAGAATCAACCACAAAGTTTGCGGAGCGCTTCAGGCAGTATCTCCAGTACAATGTACACCTTTAGCCTCTTATCATGT
TATCCAAACAGTGCACTGAAAATCATTACCTTCTGGGCTTATTTTCTGTGCTATCAGGTACAGAAAATCCCACGCAAGCG
CCGGTAGCCTTTAAAGATTTTCATGTGTCTGTGCTTACTGAAGAAGATGGAGTGATAGAGGTTGGTTGGCAATTTTCTCT
CGGTAATAGAATGGTCTGAAAATAAAATCCAGCTCTTTTGCCGATTTCATCTTAATCTTTTTACCTTTCCATTTTGTTTG
TTACAAGACACAGATACGAGTAACTATTAGCAGTAAAATGACGGATTCTGTCTTTGAGAAAGTCTTATCAAAGCATATTG
CCGCGGCACAACCACTTCCAGGATTTCGGCGACTGAAAGGAGGTAGCAGGCCTTTTATTTCCCTATCCATCTCAGTTCAG
ATAGAGCTACGGTTGCAACTCTGTTTCTGTTATTCGATCTTGTATCTTCAAAATCTCTGGAGGTCAACCCATGAGTTCAA
TATTTAACATCTGAAGAACACTCAGAACAAATGGCTTCTTGATGTGTCATATACTCATCGTATGTCTCAATGGATCATTA
GCCGAGCTATTTGCTT-----------GAAGTTGTTTAATTAGATTAACCGTAGATTGCACTTCTCTTATTTTATTTACC
TTTTCGTCTTTGTAGCATTTTGAATTGTTACAGCTTAGACC---GCTTAATTTTTTTTATATGGAACTAACGGTGGTCAC
TTTCCTCGACACTGGTGCTACTTGAA------CAGGGAAAACTCCAAATGTAAGTTTTCGTGACAACCAAAAACTAGTTC
CTCTGCTTCGGAACATCTGCACATGCTAGCTGGATTGTGTTTTGACCTGCTCCATGAATCTTGTTGTGGCTCAGGTACCA
AAAGAAGTCGCTCTGCACTTGATTGGACCGTCAAAAGTGAAGAAAGCAGCCATCAAGAAAATCATCAACCGCGCAGTCGC
TGAATATGTTGAAAAGGTAACAACTACTATCCATGGGTTTCCTACTTTAGATGTGAATTGGTTGGTCATTTACCTCTGTT
GCATTGACATGCTGCAGGAGAACCTTGACGCGGCAAAGAACCTGAAGGTTCTGCAAAGCTACGAGGAGCTCGAGGCCACG
TTCGAACCTGGAAAAGAGTTCTGCTTCGACGCGGCTGTCCATCTAACAGGAAGCTGA-----------------------
--------------------------------------------------------------------------------
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>chr5B_1_TraesCS5B01G300100
GACAAGGGCTTACTACTGAACCAGCGAAGTAGTCGCATCCAATGCACGCTCATACAAAATTTCAACGGTGACAAGATTTA
TAGCTTCAAAATCTAACT----TTCTAGTTTGCAAGGGAGAGATGTTATGGATGGATATTCAGTAGCGATGAAGGA----
-----GATAATTCGACACATCGAAATCGGGCAATCACCTGCCGAGCATGGTGCAGCAGGCTGCAGAGGTTCTCCTGTAGC
TGAGGCATCATGCCGCCGTAGTCCATCAATATCACAGGCCGCAACCCGGTGCAGAGGAACGTGATATCTGCCAACAGTTC
ATCAGTGCCAGTTTAGTAAGTTTGCTCCATAGTGCACTAGTGTCAAATGCCACTCGACATACATAAATACAGTCGCTCTG
CACAATTACTCCGTAGGTTCCCGATC--------------------------AATTTTGAACCTACTGGAACTAGCTACG
GCATGTGTGAGC---TATATGTTGTCGAACTCTGAAACTATCTGAACCTAGCT----------------GGGTCATGTGG
TGGATGTTGACTTGCACAAC----TGCATAAATTTGCCACCGAATCATGCAGCTCTTATCTTGGAGAAGAAC--------
---------------------------CAGCAATATCACAGCAAAGAAACGAGACGACTTCGCAGCATTTCCTAGACAGT
TTCCATCAGGGAGAAGCAAAACAGAGGAACGAGAAGCTTGTTAGTGGGCACCGACCGTTAAGCAGGCGGCGCTTAGACTG
GGGGCGGAGGCGCCACCGGATGCGGGCAGCGCAGGCCTCCACCACCCGCAGCATCTCCTCGTACGCCCCCGCCTCCGCCG
CCACCTCCATCGTCGCCGCCGCCGCCGTT--------------GCGAGATAGAATCTGAGAGTAGTGCTAGTGAAACAGG
CACGGAGCGTTCTGTCCGACTGATTGGAAATAAACGGTCGGGATCCAAGGGGGAATTGGATAACTGCCTCCTG-CCCTCC
TCCAGTACTCCACTCCTG------GGGCTTCTTGCTTGGAATTGGAAGGCAGCAGAAGCTCTCTTGGACTGGATAGCAAT
GGAGTTATCCATTTCCATGGGAGGCTCTGCTGTGGCAACGGGCCTCGTGAATCTCAAGGTACACCCGCTCCCCCCCGCCC
CCTCTCTCCGATGCTACCTTCTTGAGGGGTGCTTTATGTATCCTTGCCTAGGGTTTAAGGCG---TGATGTGAATTATTA
TGTTGGGGAA----------------------------------------------------------------------
--------------------------------------------------------------------------------
----------GTTGGTACTTTTTACTT-GCGCAGTTCATTGCAATTGAAGAGAATGGTTAGCATTGGGGTGATATATTTT
CCTGTCCGAGATAGTGGTTGGCTTAAAAAAAG-CCAGCTCTTAAATTTTACCTCA---AAACTTGTGAAGAATTTTGGGT
TCAGTGATTAGAAGTAGAACTCACGATGGAATTTGCACAAGAGAGAAGATATTCAGAGGTTTTAGTCTTTGTTTTGTTCC
TTTCTCAGCCTTGGCATTAAGAGGGTTAAACAAACGCACCTG----CGGGTGCTGTTGTTTAATTCAGCACAATGTAAGG
TATGTAGAAAAATGTATGTTATGTTCAGACAGGCAA--------GCACACTAATGGATTATATAGGACACTTTGCATTAA
ATTTCGCTCAAGGAAGGGGAGAAAACAATCTGGATGTAGGCATCCAATCCATTATCTCGCTGTTCATTCCTTAGAGTTAT
GTTCAATGCTTTAGCTTACTCATGCGAAATCGCAATCA-AAATTTGTGGATTGTTTTGCAGATGGTGAATCACAAATGCA
CCAGGGGCCTTGGACGTCAACTTCAGTTTTCACATGATGTACCATCTTCTGTGTGCCTGATGATATTTAACAAAGAATTC
TCAAAACGGTAGGTGGCTGTTGCTTACTCGGATCATTGACGGTCTTAAAATGA-TTATTCCTTTAATGTTCGATCGTACT
GAGAGAGTACTACCTAGTACTGCTTAGTGCTTTGCACTAATGGATTGCTTCACTGTCCATAGTTGCTTATGAATTTGTTT
TCCAGAATCAACCACAAAGTTTGCGGAGCGCTTCAGGCAGTATCTCCAGTACAATGTACACCTTTAGCCTCTTATCATGT
TATCCAAACAGTGCACTGAAAATCATTACCTTCTGGGCTTATTTTCTGTGCTATCAGGTACAGAAAATCCCACGCAAGCG
CCGGTAGCCTTTAAAGATTTTCATGTGTCTGTGCTTACTGAAGAAGATGGAGTGATAGAGGTTGGTTGGCAATTTTCTCT
CGGTAATAGAATGGTCTGAAAATAAAATCCAGCTCTTTTGCCGATTTCATCTTAATCTTTTTACCTTTCCATTTTGTTTG
TTACAAGACACAGATACGAGTAACTATTAGCAGTAAAATGACGGATTCTGTCTTTGAGAAAGTCTTATCAAAGCATATTG
CCGCGGCACAACCACTTCCAGGATTTCGGCGACTGAAAGGAGGTAGCAGGCCTTTTATTTCCCTATCCATCTCAGTTCAG
ATAGAGCTACGGTTGCAACTCTGTTTCTGTTATTCGATCTTGTATCTTCAAAATCTCTGGAGGTCAACCCATGAGTTCAA
TATTTAACATCTGAAGAACACTCAGAACAAATGGCTTCTTGATGTGTCATATACTCATCGTATGTCTCAATGGATCATTA
GCCGAGCTATTTGCTT-----------GAAGTTGTTTAATTAGATTAACCGTAGATTGCACTTCTCTTATTTTATTTACC
TTTTCGTCTTTGTAGCATTTTGAATTGTTACAGCTTAGACC---GCTTAATTTTTTTTATATGGAACTAACGGTGGTCAC
TTTCCTCGACACTGGTGCTACTTGAA------CAGGGAAAACTCCAAATGTAAGTTTTCGTGACAACCAAAAACTAGTTC
CTCTGCTTCGGAACATCTGCACATGCTAGCTGGATTGTGTTTTGACCTGCTCCATGAATCTTGTTGTGGCTCAGGTACCA
AAAGAAGTCGCTCTGCACTTGATTGGACCGTCAAAAGTGAAGAAAGCAGCCATCAAGAAAATCATCAACCGCGCAGTCGC
TGAATATGTTGAAAAGGTAACAACTACTATCCATGGGTTTCCTACTTTAGATGTGAATTGGTTGGTCATTTACCTCTGTT
GCATTGACATGCTGCAGGAGAACCTTGACGCGGCAAAGAACCTGAAGGTTCTGCAAAGCTACGAGGAGCTCGAGGCCACG
TTCGAACCTGGAAAAGAGTTCTGCTTCGACGCGGCTGTCCATCTAACAGGAAGCTGAAGCAGTGAAGGCCGTCCTACGAT
GCCATTAGAGAGATGACGACTGCAGGGTGGGGGACTCCTGGGCATCTGCCC-ATTGATCC-TAAGCTCTCAGCTCTGCTA
GCCTGCTGCATACGGCCCTATTGCTATCTCTACTGGCTATAAATATCTGTACGTTGCAACGGGGGCAACTCTATTCTAGT
TGTTCAACATAGAAAATTTCCGATTGCACTACTGGAAAAATCGTCGTTACCGAGTCCGAGTACACCGTTGTTTGCTGAGT
ACCACAACACGGGATCACGGTGAAGGACTCGTAAGCTGAGTACGACTCTTGGCAGACAGCAGGGCACGACATATGGTAGA
AGCTGCCGAACACCCGATAGGAAGTACTCGGCAAACATGACAGAACTCGGCTTACGGAGCGT------------------
---------------GTACCCTTAGTCGAGAACTACACTCTTGGCAAACTCTCTGCTGAGTGTAAAACGGCTTTCGCCGA
GCTTTTCGGCACTCAGGAAAGTTGGAACTACACTCTTGGCAAACTCTCTGCTGAGTGTAAAATGGCTTTCGCCGAGTTTT
TCGGCACTCAGGAAAGTTGGAAATTCCAGTAGTGTTGGGTTAAGACTGAGATATGACGTGGGGAGGGAATTTATAAGCAA
ACGTGAGGGGAAATATGATGTGATTGAGATTGTGTGCTTACAAGTACGTGAGTTTGATT---------------------
-------CTATTGATGATTTATTTGATTTCTGTTGATTGCTTTGCAAGGGTTTTTTCTTTCCCTAGAAATGAGAGGTGGG
GATTGGTTTGAGAAAATAATAATGGGGTTACCA--TGGGATTTGTTTCTCAGGAAACGAGGTGGGC---GGTCGTTTTGG
GAAAA---AGAAAATGAGGTTATCACATGGTTTGGAAA------------------AAAAAGGCATGTATCGATGGAAGG
GGTGAAAGCGATGGAAGTCAAACCAACAAACTTCCTTTTATTAATATTGTAAT--AGATGATCATGGATGCTAGTCTGTT
TTTTTTTTCGATATAGAGAACAAATTTT
>chr5D_2
-ACAAGGGCTTACTACTGAACCAGCGAAGTAGTCGCATCCAATGCACGCTCATAC-AAATTTCAAGAATGACAAGATTCG
TAGCTTCAAAATCTGACTGATTTTCTACTTTGCAAGGGAGAGATGTTATGGATGGATATTCAGCAGCGATGAAGGA----
-----GATAATTCAACACATCGAAACCGGGCAATCACCTGCCGAGCATGGTGCAGCAGGCTGCAGAGGTTCTCCTGTAGT
TGGGGCATCGTGCCGCCGTAGTCCATCAGTATCACAGGCCGCAACCCGGTGCAGAGGAACGTGATATCTGCTAACAGTTC
ATCAGTGCCAGTTTAGTAAGTTCGCTCCATAGTGCACTAGTACCAAATGCCACACGATATACATAAATATAGTCGCCCTG
CACAATTATTCCATAGCTTCCCAATCAAGCTACCCATGTACCG---GTATCAAATTCTGAACCTACTGGAACTAACTACG
GCATGTGTGAGCTAGTATATGTTATCGAACTCTGAAACTATCTGAACCTAGCTCGACTTAAACCAAGCCGGGTCATGTGG
TGGATGTTGACTTGCACAAC----TGCATAAATTTGCCACCGAATCATGCAACTCTTATCTTAGCGAAGAATCAATTTTT
TTTTTGCGCATAATCTTAGCGAAGAATCAGCAATATCACAGCAAAGAAACGAGGCGACTTCGCTGCATTTCCTAAACAAT
TTCCATCAGGGAGAAGCAAAACAGAGGAACGAGAAGCGTGTCAGTGGGCACCTACCGTTGAGGAGGCGGCGCTTGGACTG
GGGGCGGAGGCGCCACCGGATGCGGGCGGCGCAGGCCTCCACCACCCGCAGCATCTCCTCGTAGACCCCCGCCGCCGCCG
CCACCTCCATCGCCGCCGCCGCCGCCGCCGTGCGCGCCCAGCGGCAAGACAAAATCTGAAGGAAGTGCTAGTGAAACAGA
CGCGGAGCGTTCTGTCCGACCGATTGAAAATCAACGGTCGGGATCCATGGGGGAATTGGATAACTGCCTCCTGCCCCTCC
TCCAGTACTCCACTCCTG------GGGTTTCTTGCTTGGAATTGGAAGGCAGCAGAAGCTCTCTTGGACTGGATAGTAAT
GGAGTTATCCATTTCCATGGGAGGCTCTGCCGCGGCAACCAGCCTCGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNGTTGGTGCTTTTTTTTGGGTGCAATTTGTTGCAATTGAAGAGAATGGGTACCATTAGGTTGATGTATTTG
TCATTCTAAGAGAATGACTGGCTGAAAAAAAATCCAGCTCTTGGTTAATTTTCCTTATAAACTTGTGAAGAACTTTGGGT
TCAGTGATTAGTACTAATACTTACCAGAGAATTTGCACAAGAGAGAACATATTCAGAGGTTTTAGCATT-----------
---------------AATAAGAGATTTAAACCCACACACCGACACACGGGTGCTATTGTTTAATTCAGGGCGATGTAAGG
TAGAAAGATA---------TATGTTCAGACAGGCAAATGATCTTGCACACTAATTGAT----------------------
--------------------------------------------------------------------------------
---------------------------------AAAAA-AAAATTGTGGGATGTGCTGCAGATGGTGAATCACAAATGCA
CCAGGGGGCTTGGACCTCAACTTCAGTTTTCGCATGATGTACCATCTTCTGCTTGTCTGATGATATTTAACAAAGAATGT
TCAAAACGGTAGGTTGCTTCTGCTTAATCGGATCATTGACAGTCTTAAAAATGTTTATTCCTTTTACACTCGATTGTACT
GAGGGAGTAATACA---TACTGCTTAGTGCTTAGCACTAATGGATTACTTCACTGCTCATAGTTGCTTGTGAATTTGTTT
TTCAGAATCAACCACAAAGTTTGCAGAGCGCTTCAGGCAGTATCTCCACTACAATGTACACCTTTATCCTCTTATCATGT
TATCCAAACAGTGTACCGAAAATC-TTACCTTCTGGGCTTAT-------GCTATCAGGTGCAGAAAATCCCATGCAAGCA
CCAGTAGCCTTTAAAGATTTTCACGTTTCTGTGCTTACTGAAGAAGATGGAGTGATAGAGGTTGCTTGGCATTTTGCTCT
CAGTAATAGAATTGACTGAAAATAAAATCCAGCTCTTTTGCAAATTTCATCTTAATCTCTTTACTTTTCCATTTTCTTTG
TTACAAGACACAGATACGAGTAACTGTTAGCAGTAAAATGACAGGTTCTGTCTTTGAGAAAGTCTTATCAAAGCATATTG
CCGCGGCACAACCACTTCCAGGATTTCGGCGATTGAAAGGAGGTAGCAACCCTTTTATTTCCCTATCCATCTCAGTTCAG
ATAGAGCTACGGTTGCAACTCTGTTTCTGTTATTCGATGTTGTATCTTCAAAATCTTAGGAGTTCATCCCATGAGTTCAA
TATTTAACATCTGAAGAACACTCAGAACAAATGGCTTCTTGATGTGTCATACACTCATCGTATGTCTCAATGGATCATTA
GCCAAGCTATTTGCTTTAATCCATATAGAAGTTGTTTAATTATATTAACCGTAGATTGCACTTCTCTTATTTATTTAG-C
TTTGCATCTTCGTAGCAGTTTCAATTGTTACAGCTTAGACAGCTGCTTAATTTTTTCTTGTGA-AACTAACGCTGGTCAC
TTTCCTCGACATTGGTGCTACTTGAAATGATTCAGGGAAAACTCCAAATGTAAGTTCTCGTGACAACCAAAAACTAGTTC
CTCTGCTTCGGAACATCTGCACATGCTAGCTGGATTGTGTTTTGACCTGCTCCATGAATCTTGTCGTGGCTCAGGTACCA
AAAGAAGTCGCTCTGCACTTGATTGGACCATCAAAAGTGAAGAAAGCAGCCATCAAGAAAATCATCAATCGCGCAGTAGC
TGAATATGTTGAAAAGGTTACAACTACTATCCATGGGTTGCCTACTGTAGATGTGAATTGGTTGGCCATTTACCTCTGTT
GCAATGGCATGCTGCAGGAGAACCTTGACGCGTCGAAGAACCTGAAGGTTCTGCAAAGCTACGAGGAGCTCGAGGCCACG
TTCGAACCTGGAAAAGAGTTCTGCTTCGACACGGCTGTCCATCTAACAGGAAGCTGAAGCAGTGAAGGCC-TCCTACGAT
GCCATTAGAGAGATGACCACTGCAGGGTGGGGGACTCCTGGGCAGCTGCCC-CTTGATCCTTAAGCTCTCAGCTCTGCTA
GCCTGCTGCATACGGCCCTGTTGCTATCTCTACTGGC--TAAATATCTGTGCATTGCAACGGGGGCAACTCTATTCTAGT
GGTTCAACGTAGGAAATTTTTGATTGCACTACTGGAAAAATCGTCGTTACCGAGTACATTGGTT------TTTGCCGAGT
ACCAGAACACGGGATCACGGTAAAGGACTCGTAAGCCGAGTACGGCTCTCGGCGGACAGCAGGGCATGGCATATGGTAGA
CGCTGCCGAACCGCCGACAGGAAGTACTCGGCAAACATGACAGAACTCGGCTGACGGAGCGTATGCCAAGAGCCTCACGG
ATGGGTTGGGGCCGAGTACCCTTAGCCAAGAACTACAC---TGGCAAACTCTCTGCCAAGTGTAAAACGGCTTTCGCCGA
GT--------------------------------------------------------------------------TTTT
TCGGCACTCGGGAAACTTGGAAATTCCAGTAGTGTTGGGTTAAGATTGAGATATGACGTGGGGAGGGAATTTATAATCAA
ACATGAGGGGAAATATGAAGTGATTGAGATTGTGTGCTTACAACTACGTGAGTTTGATT---------------------
-------CTATTGGCGATTTATTTGATTTCTCTTGATTGCTTTGCAAGG-TTTTTTCTTTCTCTAGAAAAGAGCGGT-GG
GATTGGTTTGAGAAAATAATAATGGGGTTACCA--TGGGATTTGTTTCCCAAGAAACGATGAGGTGGGTGGTCGTTTTGG
GGGAA---AAAAAATGAGGTTATCACATGGTTTTTTTTTGCGGGTCACATGGTTTGAAAAAGGCATGTATCAATGGAAGG
GGTGAAAGCCATGGAAGTGAAACCAACAAACTTCCTTTTATTAATATTGTATAAGAGATGATCATGGATGCTAGTCTGTT
TTCTTGTTCAATGTAGAGAACAATTTTT
>chr5A_5
----AGGGCTTACCACTGAATCAGTGAAGTAGCCCCATCCAATGCTCGCTCATACAAAATTTCAACAATGGGTAGAATCA
TAACTTCCAAATCTGAGT----TGCTACTTTACAAGGGAGAGATGCTTTGGATGGATATTCAGTAGCGGCGAAGGATAAA
ATACAGATAACTCAACACACTGAGTTCGGGCAATCACCTGCCGAGCATGGTGCAGCAGGCTGCAGAGATTGTCCTGTAGC
TGAGGCATCGTGCCGCCGTAGTCCATCAGTATAACAGGCCGCAACCCGGTGCAGAGGAACATGATATCTGCCAGGAACTC
GTCAGTGCCAGTTCAATAAGTTTGCTCCTCAGTGCACTAATGCCAAATGCAGTCTCGAATTAGAAATCATCGTCTCCCTG
CACAGGTATTCTGCAACTAGCTGATCAATCTACCCACCTATTGGTAGTACCAAACCCTGAACCTATTGGAACTAAACATT
G----------------------------CTCTGAAACTATCTGAACTTAGCT----------------GGATCGAGTTA
TGCCAAGCTGGGCCGGGTAATGGATGGATGAACCAGCTACCGAATCACATGTTTTAGCACCAAATTCAGCAATACGGCAC
AGAACAAAG---------------------------------AAAGAAACGACACGAGCTCGCAGCTTATACTCCTGGGA
GCACC-------------AAATGGAGGAACGAGGAGCATGTTAGTGGACACGGACCGTTGAGGAGGCGGCGCTTGGATTG
TGGGCGGAGGCGCCACCGGATGCGGGCGGCGCAGGCCTCCACCACCCGCAGCATCTCCTCGTACACCCCCGCCGCCGCCG
CCACCTCCAT---CGCCGCCGCCGCCGCCGTGCGCGCCCAGCGGCAAGACAGAATCTGAAGGAAGTGCTAGTGAAACAGA
CGCGGAACGTTCTGTCCGACCGATTGAAAATCAACGGTCGGGATCCAAGGGGGAATAGGATAACTGCCTCCTG-CCCACC
TCCAGTACTCCACTCCTGGTCCTGGGGTTTCTTGCTTGGAATTGGAAGGCGGCAGAAGCTCTCTTGGACTGGATAGCAAT
GGAGTTACCCATTTCCATGGGAGGCTCTGCTGCGGCAACCAGCCTCGTGAATCTCAAGGTACACCCGCTACCCCCCTCCC
CCTCTCTCCGATGCTACCCTCTTGAGGTGTGGTTTATCTATCGTTCCCTAGGGTTTAAGGCTATCTGATGTGAATTATAT
TGGGGAATGTTGGTGATT--------------------------------------------------------------
--------------------------------------------------------------------------------
------------------TTATTTTTTGGCGCAATTTGTTGCAATTGAAGAGAATGGATAGGATTAGGTAGATGTATTTG
CCATTCTAATAGAATGGCTGGCTTAAAAAAATTCCGGCTCTTAACTTTCCTC------AAACTTGTGAAGAACTTTGGGT
TCAGTGATTAGGACTGATGCTTACGAGAGAATTTGCAACAGAGAGAACGTATTAAGAGGTTTTAG---------------
--------------CATTAAGAGATTTAAATCCACACAC--------GGGTGCTATTG--TAATTCAGGGCGATGTAAGG
TAGAAAGATA---------TATGTTCAGACAGGCAAATGACCTTGCACACTAATTGAT----------------------
--------------------------------------------------------------------------------
---------------------------------AAAAACAAAATTGTGGAATGTGCTGCAGATGGTGAATCACAAACGCA
CCAGTGGGCTTGGACCTCAACTTCAGTTTTCGCATGATGTACCATCCTCTGCTTGTCTGATGATATTTAACAAAGAATGT
TCAAAACGGTAGGTTGCTTCTGCTTAATCGGATCATTGACAGTCTTAAAAATGTTTATTCCTTTTACACTCGATTGTACT
GAGGGAGTAATACC---TACTGCTTAGTGCTTACCACTAATGGATTACTTCACTGCTCATAGTTGCTTGTGCATTTATTT
TCCAGAATCAACTATAAAGTTTGCAGAGCGCTTCAGGCAGTATCTCCAGTACAATGTACACCTTTATCCTCTTATCATGT
TATCCAAACAGTGTACCGAAAATC-TTACCTTCTGGGCTTAT-------GCTATCAGGTGCAGAAAATCCCATGCAAGCA
CCGGTAGCCTTTAAAGATTTTCATGTTTCTGTGCTTACCGAAGAAGATGGAGTGATAGAGGTTGCTTGGCATTTTGCTCT
CAGTAATAGAATTGACTGAAAATAAAATCCAGCTCTTTTGCAGATTTCATCTTAATCTCTTTACTTTTCCATTTTCTTTG
TTACAAGACACAGATACGAGTAACTGTTAGCAGTAAAATGACGGTTTCTGTCTTTGAGAAAGTCTTATCAAAGCATATTG
CCGCGGCACAACCACTTCCAGGATTTCGGCGATTGAAAGGAGGTAGCAAGCCTTTTATTTCCCTATCCATCTCAGTTCAG
ATAGAGCTACGGTTGCAACTCTGTTTCTGTTATTCGATCTTGTATCTTCAAAATCTTAGGAGTTCATCCCATGAGTTCAA
TATTTAACATCTGAAGAACACTCAGAACAAATGGCTTCTTGATGTGTCATACACTCATCGTATGTCTCAATGGATCATTA
GCCGAGCTATTTGCTTTAATCCATATAGAAGTTGTTTAATTATATTAACCGTAGATTGCACTTCTCTTATTTATTTAG-C
TTTGCATCTTCGTAGCAGTTTCAATTGTTACAGCTTAGACAGCTGCTTAATTTTTTTTTGTGA-AACTAACGCTGGTCAC
TTTCCTCGACATTGGTGCTACTTGAAATGATTCAGGGAAAACTCCAAATGTAAGTTCTCGTGACAACCAAAATTTAGTTC
CTCTGCTTCGGAACATCTGCTCATGCTAGCTGGATTGTGTTTTAACCTGCTCCATGAATCTTGTTGTGGCTCAGGTACCA
AAAGAAGTCGCTCTGCACTTGATTGGACCATCAAAAGTGAAGAAAGCAGCCATCAAGAAAATCATCAATCGCGCAGTCGC
TGAATATGTTGAAAAGGTAACAACTACTATCCATGGGTTGCCTACTTTAGATGTGAATTGGTTGGTCATTTACATCTGTT
GCAATGGCATGCTGCAGGAGAACCTTGACGCGTCGAAGAACCTGAAGGTTCTGCAAAGCTACGAGGAGCTCGAGGCCACG
TTCGAACCTGGAAAAGAGTTCTGCTTTGACGCGGCTGTCCATCTAACAGGAAGCTGAAGCAGTGAAGGCCGTCTTACGAC
GCCATTGGCGAGATGACCACCGCAGGGTGGGGGACTCCTGGGCAGCTGCCCCCTTGACCATTAAGCTCGCAGCTCTGCTA
GCCTGCTGCATACGGCCCTGTTGCTATCTCTACTAGC--TAAATACCTGTGCGTTGGAACGGGGGCAACTCTCTTC-AGT
CGTTCAACATAGGAAATTTTGA----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------TTGGGTTAAGTTTGAGATATGACGTGGGGAGGGAATTTATAAGCAA
AGATCAAGAAAAATATGATGCGATTGACATTGTGTCTGTACAACTACGTGAGTTTTATTTTATTGTTTGCTTGCAAAGGA
TTTCTTGCTATTGGCGATTTATTTGATTTCTGCTGATTGCTTTGCAAGGGATTTTTCTTTCCCCAGAAACGAGAGGTGGG
GATTGGTTTGAGAAAATAATAATGGGTTTATTGTGTGGGATTTGTTTCCCGGGAACTAGGAGTGGTCGGTCATCATTTTG
AAATAAATAAATAATGAGGTTATCACGTGGTTTGAAAA------------------AAAAGGGCATG-------------
--------------------------------------------------------------------------------
----------------------------
>SNPs
S-----------------------------------------------------------------SS----------S-
--------------S------------S----------------------------------------------------
-------------S------------------------------------------------------------------
---------S------------------S---------------------------------------------------
------------------------------------------S----------S---S-----------S------S---
--------S-------S---------------------------------------S-----------------S-----
-----------------------S--------------------------------------------------------
---------------------------------------------------S----------S-S------S--------
--------------------------------------------------------------------------S-----
-------------------------------------S---------------------S--S-----------S-----
---------------------------S------------------------------------S--------S------
------------S--------------SS----------------S---S---------SS-S----------------S
-S------------------S-----S----S------------------------------------------------
---------------------------S----------------------------------------------------
--------------------------------S------SS----------------------------S------S---
------------------S--------S---S-----S----S--S---------------S----------------SS
--SS-SSSSS----------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------S------SS--------S--SS-------------------S-------S--S----S-----S
--SS--SS---S-S---S-------------S------------S----SS-S-S-----------------S-------
-----------S-S--SS---S----SS-------------------S-----------------SS--SSSSSSSSSSS
SSSSSSSSSSSSSS---------SS------SS--S----SS------------S-------------SS-S--------
--SSS---S-SSSSSSSSS-----------------------------------S---SSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--SS-----S-------S---SS------------------------
-------S-------S---------------S-------------------SS--S----------------------SS
--------------S---SS------S-------------S---------SSS-----------S-SSS-----S-----
---S-----S----SSS---------------S-------------S--------SS-----------S-----------
------------------------S-----------------------------------------S-------------
-------------S--S-------S-----------------SSSSSSS----------S------------S------S
--------------------------S-------------------------------------S------S---S----
-S----------S-S--------------------------S----------------S-----S----------S----
-------------------------S------------------S-----------------------------------
--------------------------------S---------------S-------------------------------
--------------------------------------------------------SS----S---S-------------
---------------------------------------------------S----------------------------
------------------------------------------S-----------------------------SS--SSS-
---S-S----S------S---S------------------S-----------------SSSSSS--------S-------
-----------S--------------------------------------------S-----------------------
--------------------------------------------------------------------------------
-----------------------------S--------------------------------------S-----------
---------------------------------------S----------------------------------------
---S--S-------------------------S-S---------------------------------------------
--------------------------------------------------------------------------------
-----------------S--------------------------S-------S---------------------------
-------------------S-----------------SS-----------S-----------------------------
S-----------S------SS----------------------------------S-SSSSSSSSSSSSS-----S----
----S----------------S--------------S-------S----S---S------------S-S-----------
S----------SS----S----------------------------------S---------------------------
-------------------------S-S----------SSS---------------SS----------------------
-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----
---------S-----S-----------------------------S----------------------------------
--S----------------------------------------S------------------------------------
-------------SS------------------------------------------------------S----------
------------------------------------------------S------------S---S--------------
---------S------------------------S------------------------------------S--------
---------S--------S--------------------------------SS---------------------------
--S--S---S--S----------S----
>forward_612
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--------------------------------TTTGCCACCGAATCATGCAG----------------------------
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>reverse_2673
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------CTGAAAGGAGGTAGCAGGCC----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------
>forward_1219
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------C
CCTCTCTCCGATGCTACCT-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------
>reverse_3367
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------ACATGCTGCAGGAGAACCTT------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------
>forward_1861
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-TTTCGCTCAAGGAAGGGGAG-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------
>reverse_3736
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------CCGAGTACACCGTTGTTTGC-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------
