>input_sequence_36680
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--------------------------------------------------------------------------ATGGCG
ACCCGTAAGCTCCCCGTCCCTTT-TCCAGTGCGAGTTTTTGTCCTTCACGAATTCGGTGGCACCGGAAATGGCGGCTGTG
GTCGTCGAACCCTCTCGATTTTTTCACTGTTCGGATTGATTGATTGGTTGGTCGCCACGGTTGCGGTGCGCGTTTCGGGG
CTGTCGTGAAGTGTCGATTTCGTGGCTAGATGTTGAGAACTGGTGTGATTTAGGCAGCATCTTAGAGAAGGTGTGGTCTC
GTCCCTGCAAAAAGATAGTTGACCGTCTGGACATGATTTATTCTTTGGTATTTATGATTAGAAATTCGAACTAATATTTA
GATTAGCTTAGAGTTTGTGGCAAGCAGCTGTTGCTGCTGCGGTCGTTATCTAGGA----------TTAACAGCATCACCA
TTTCGTATACAAGTGGTGTTGCTGTGATCTGAGGGTATGAAATTGTGATGTTTAATCATCTGGTATAGCTCTAAGTGGAT
GTCCTTGTGCCTGTGACAAGTGTTAGAAGTTCATATGTGATTGTTCAGTATAAGTCATTACCGTTATAGGCTTGGTGTTG
CTGTGCAGTTTGTGTCAACTCCGCTTCTCGTAGTCTTCTGGGTTTTGACCCTGTTCTTTGCTATGTGGTTTCTGTAGGTA
TCCAGTTTGAGAACAACTGTGAAGTTGGTGTTTTCTCCAAGCTCACAAATGCCTACTGTCTGGTTGCAATTGGAGGATCA
GAGAATTTCTACAGGTTAGCAATGGATGTTTCCTTTGGTTTAGCTTTTTGCACTTTTGGTGGAAGCAGAGGAATAACCAA
CTCTTAACTGACTGTTCTTTTGAATACTTATGCAGTACATTTGAGTCTGAGCTTGCAGATGTCATTCCTGTGGTCAAGAC
CTCTATCGGTGGCACTAGAATAATTGGTCGCCTCTGCGTTGGTTAGCCTTTGAACTTGTATTCATTCATTTGAGCTATCC
ACTCACTTGTAGTGTACTTACCACCACCTTGATGACCCCAGGAAACAAGAATGGACTTCTCCTGCCACACACAACCACTG
ATCAAGGTACTTTATTCCAGTACTTCAATGTTCAATCTACGGTGTAATTATTTGCACAATTCTGTTATGTCTTGTGTGTT
GTTG--------TGTACTGCACAGTGCTCTTATGGTTTAATACGCTTTTGAATACGAAGTTGCTTTCTACCAGGACTCAC
TTTCAAGTTGATTTTAGTACTTCCGAGACTGTTGATACTATAGGAATTACATAGAAGTTGCTTAGAGATTTGTTATGTCT
ATAGAGGCTGGTTTCTTCAGGCAATTATAATGTCTCTGTTCTTAGAGATCTTGCATCTAGGGAGGCATGATTTCTGTACA
TAACTGATATTATGATTTTCGTTATGCTTACTATTTTTATGGGTCCTCGTATTTTTTTCTAGAGCTTCAGCATCTGAGGA
ACTGCATACCTGATCAAGTGGTTGTTCAGCGCATCGATGAGAGGCTGTCCGCCCTTGGCAATTGCATATCCTGCAATGAC
CATGTTGCGCTCACACACCCTGACCTTGACAAGGTATGCCTATACATCCCTAGTGATGTTTGTTTGCTGGCCCTGTGCCT
TCCCTAGCTTATACTCAACTAAAGTATCTCCTGTTCGCC-CCCCAGGCAACTGAGGAGCTTATTGCAGATGTGCTTGGGG
TTGAGGTGTTCCGTCAGACAATTGCAGGAAATATCCTTGTTGGCAGCTACTGTGCATTCTCTAACAGGGGTGGACTGGTA
TGGTGTTACTGCATTTGCATCCTTCTGATCTATTACCTCTGTTCCGAAATATAAGTCGCTGGGGGAGTTCAGTTTACACT
CCCCCAACGACTTATATTTATGGAACGGAGGGAGTACCTGTTTCTGCAAAAATTGGTTAAAAGTTATTAATGTGCAATTC
CTTTGTGATACAGGTCCATCCTCACACATCCATTGAAGATCTTGATGAGCTGTCCACACTCCTCCAAGTCCCTCTTGTAG
CTGGAACCGTGAACCGTGGTAGCGAGGTCATTGCTGCGGGCATGACGGTGAACGACTGGACCGCCTTCTGTGGGTCAGAC
ACAACCGCTACTGAGCTGTCCGTCATCGAGAGCGTCTTCAAGTTGAGAGAAGGCCAGCCCACGGCGATCGTCGATGACAT
GAGGAAGTCGCTGATTGACAGCTATGTCTAA-------------------------------------------------
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>chr2D_1_TraesCS2D01G152200
AACGTAGAATTTTTTTGAATATTCCAGATAACAAGCACATCCCCAAAACAATGAGCTTTTATTTTTAGAAACAGCACATA
AAACAATATACAT-ATGCATGGAGAACACAGTATTTCTCGTATATACAAGATCAAATAAAAGTAGTTAAGATGCAACAAA
TACCAAACATATGAGTGATCAGGGAAAGGTATTCCATTTTCTCGCAACCTTTGATTATAGAATTACAATAAAGTTTGCAA
AACGTGTGAGTAATTAGAGGAAGGTATACCATTTATTCACAAACTTTGATTGATATATACAAAATGACAGTGAATATTCA
GAAACATATTAGTGAAATAGAGGAAATTATAA--TTTTACCACAAACTTGGAAGAATAACTATAAAACGCCACT-AAAAT
TTCAAAAATCTCGGAAAATTACCATCTTAACTCGTGCTTTTTATGTTGCTATAAATGAAAATTGCTTGTTAAATCAATTT
GAAATTTCGTAAGTTAAATCCTATTTAATGGAAGTTAGAAATGCCACTTCCAC-TTTTTATGACTTGAGGATTTCCAGAT
TAA-----------------------------ATTACGTTTTTCAAAACATTTCGCAGCGAGAGAAGCCCAACAGCGATG
GGTTGGCCGAACACACACGGATGGGAGCCTCCCCGTAGCATCATCATGGGCCGTCTGTGACGGCTCAACCTAATAGGACC
AGCCCGTTCGGCCCGCACAGTTCCGCCGCGGTCTCTCCGAGCGGCCCGTGCTCATATACCACGATGCCACGGCTCTCCCC
TCGTTCCCCATTCTCTCGGAAGTCGCGCTCCCAAACCCTAGCTCCCCACCGCAGCGGCCACCGCCTCTCGACCCCCGCCC
CCTCCCTCCCGGTTCGCCGCCCGCTTCCTTCTCCCGCATCAGCGACCCCTCTCCCCTGCCCGGCCGCTCGCTGAATCATC
CGCGCGTTTGATCTGCAGGTGCGCGCTTGTTGCTGCAGACGAGAAGCGGCTGAGGCGAAGAAGAGGAATCGACCATGGCG
ACCCGTAAGCTCCCCGTCCCTTT-TCCAGTGCGAGTTTTTGTCCTTCACGAATTCGGTGGCACCGGAAATGGCGGCTGTG
GTCGTCGAACCCTCTCGATTTTTTCACTGTTCGGATTGATTGATTGGTTGGTCGCCACGGTTGCGGTGCGCGTTTCGGGG
CTGTCGTGAAGTGTCGATTTCGTGGCTAGATGTTGAGAACTGGTGTGATTTAGGCAGCATCTTAGAGAAGGTGTGGTCTC
GTCCCTGCAAAAAGATAGTTGACCGTCTGGACATGATTTATTCTTTGGTATTTATGATTAGAAATTCGAACTAATATTTA
GATTAGCTTAGAGTTTGTGGCAAGCAGCTGTTGCTGCTGCGGTCGTTATCTAGGA----------TTAACAGCATCACCA
TTTCGTATACAAGTGGTGTTGCTGTGATCTGAGGGTATGAAATTGTGATGTTTAATCATCTGGTATAGCTCTAAGTGGAT
GTCCTTGTGCCTGTGACAAGTGTTAGAAGTTCATATGTGATTGTTCAGTATAAGTCATTACCGTTATAGGCTTGGTGTTG
CTGTGCAGTTTGTGTCAACTCCGCTTCTCGTAGTCTTCTGGGTTTTGACCCTGTTCTTTGCTATGTGGTTTCTGTAGGTA
TCCAGTTTGAGAACAACTGTGAAGTTGGTGTTTTCTCCAAGCTCACAAATGCCTACTGTCTGGTTGCAATTGGAGGATCA
GAGAATTTCTACAGGTTAGCAATGGATGTTTCCTTTGGTTTAGCTTTTTGCACTTTTGGTGGAAGCAGAGGAATAACCAA
CTCTTAACTGACTGTTCTTTTGAATACTTATGCAGTACATTTGAGTCTGAGCTTGCAGATGTCATTCCTGTGGTCAAGAC
CTCTATCGGTGGCACTAGAATAATTGGTCGCCTCTGCGTTGGTTAGCCTTTGAACTTGTATTCATTCATTTGAGCTATCC
ACTCACTTGTAGTGTACTTACCACCACCTTGATGACCCCAGGAAACAAGAATGGACTTCTCCTGCCACACACAACCACTG
ATCAAGGTACTTTATTCCAGTACTTCAATGTTCAATCTACGGTGTAATTATTTGCACAATTCTGTTATGTCTTGTGTGTT
GTTG--------TGTACTGCACAGTGCTCTTATGGTTTAATACGCTTTTGAATACGAAGTTGCTTTCTACCAGGACTCAC
TTTCAAGTTGATTTTAGTACTTCCGAGACTGTTGATACTATAGGAATTACATAGAAGTTGCTTAGAGATTTGTTATGTCT
ATAGAGGCTGGTTTCTTCAGGCAATTATAATGTCTCTGTTCTTAGAGATCTTGCATCTAGGGAGGCATGATTTCTGTACA
TAACTGATATTATGATTTTCGTTATGCTTACTATTTTTATGGGTCCTCGTATTTTTTTCTAGAGCTTCAGCATCTGAGGA
ACTGCATACCTGATCAAGTGGTTGTTCAGCGCATCGATGAGAGGCTGTCCGCCCTTGGCAATTGCATATCCTGCAATGAC
CATGTTGCGCTCACACACCCTGACCTTGACAAGGTATGCCTATACATCCCTAGTGATGTTTGTTTGCTGGCCCTGTGCCT
TCCCTAGCTTATACTCAACTAAAGTATCTCCTGTTCGCC-CCCCAGGCAACTGAGGAGCTTATTGCAGATGTGCTTGGGG
TTGAGGTGTTCCGTCAGACAATTGCAGGAAATATCCTTGTTGGCAGCTACTGTGCATTCTCTAACAGGGGTGGACTGGTA
TGGTGTTACTGCATTTGCATCCTTCTGATCTATTACCTCTGTTCCGAAATATAAGTCGCTGGGGGAGTTCAGTTTACACT
CCCCCAACGACTTATATTTATGGAACGGAGGGAGTACCTGTTTCTGCAAAAATTGGTTAAAAGTTATTAATGTGCAATTC
CTTTGTGATACAGGTCCATCCTCACACATCCATTGAAGATCTTGATGAGCTGTCCACACTCCTCCAAGTCCCTCTTGTAG
CTGGAACCGTGAACCGTGGTAGCGAGGTCATTGCTGCGGGCATGACGGTGAACGACTGGACCGCCTTCTGTGGGTCAGAC
ACAACCGCTACTGAGCTGTCCGTCATCGAGAGCGTCTTCAAGTTGAGAGAAGGCCAGCCCACGGCGATCGTCGATGACAT
GAGGAAGTCGCTGATTGACAGCTATGTCTAAATGATCAAA-GGGCATGCGGTGCGGTGTGGTT----CTTGAGCTGTACT
CTTGGTTGACAGTAGCAAAAAAC-CGTGCCTGTCTAAGCTGTTACTTCTGTCTGGTCTTCTGAATCTGGAACTACAAACT
TATATGCTTTGTACTCGTATAAAGCTTATGGTATCGGAAGACGTGCTCTTGCGCTTTTGTGATATTAGAATCTTATAACT
GCGAGTGATGTTGGTTTTACTATATTCG----------------------------------------------------
-------AGCATTGGCCAACTTTGGCTACATCTGCATTGACGATTCATGT------------------------------
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------ATCAAAAGTATAATCGGCACATGCCTTTTGCTCGCTTATTGTATAC--GAGTACAAAATCATTACACA----CA
TATAACCTGCCATATAACACGACAGGCACGGATGATGTTGTAGTCCATTTGAAACATCTAAAAAGACTTATATTTAGGAG
CGGAGGGAGTAGTACAGTACACCTTTAT-----------------TTTACGATAATAATCAACGCATGGGCCGAGAACTT
GGTATATGTAGACTGAATTAGGACGCTCCGCCGATGCGGCCCTGCTTCGCGGCGGTGACGGTGATCTTCATCCCGGCCTG
GCAGTCGCCGGGGACGCTGGAGATGAAGTAGTTTGGGCCGAGGGCGAGCGTGACGCGGTCGGCCCCGGACTTGTACACCT
TGGCGCCGCTCGGCGCGGCGCACGCCCGGTACCCCTCCGCCGACACGGCCACCACGTCGTGCGCTGTCGGGTCGTAGTTG
AACACTGCATGCATACGTACC---CAAATCCGCATGCATCAACCACCAATTTTCATGCAGCATACGTAGATCCATGTATG
TATGCACGTACCATCTCTGGGTTCAAATAAAACTGCAAAAACATCTTACG----------TTTAGAAACAGAGGGTGTAC
GTACCAAGGACGTCGCGGCCCTTGAAGCGCTTGCCGTTGGGCCAGGAGCCGGCGTTGACGGACCAGCCGCCGCCGTCGCC
GACGGTGAACTCCGCCGACTCCGCCACCCCCGCATGGAGGAATGCGCA
>chr2A_9
ATTTTC-------TTTGAATATTTCAGATAACATGCACATCCCAAAAACAATTTA-TTCTTTTTGTAGAAATATCACATA
AAAACAATATATGCATGCATGGAGAACACAAATTTTCTCGTACATACAAGATCAAATCAAAGTAGTTAAGATGCAACAAA
TACCAAACATATGAGTTACTAGGGAAAGATATTCCATTTTCTCACAACCTTTGATTACAGAATTACAATGAAGTTTCCAA
AACGTCTGAGTAATTAGAGGAAGGTACACCATTTATTCACAAACTTTGAGTGATATTTACAAAACTACAGTAAATATGTA
GCAACATATGAGTGAC-TAGATGAAATTATAATATTTTACCACAACCTTGGAAGAATAACTATAACACGACACTAAAAAT
TTCAAAAATCTCGGAAAATTACCATCTTAACTCGTGCTTTTTATATTGCAATACATGAAAATTATTTGTTAAATTAATGT
GAATTTTTTTAAGTTAAAACCTCTTTAATGGAAGTTAGAAATGTCATTTCCAGTTTATCATGAATCGAAGATTTCCAGAG
TATATTACGTTTTTTTTTTTGAGACAGAGTATATTAGGTTTTTCAAAACATTTCGCAGTGAGAGAAGCCCAACGGCGATT
GGTGGGCCGTACACACGAATGAGAGCCTCGGGCCATAGCATCAGCACGGGCCGACTGTGACGTCTCGACCTAACAGGACC
AGCCCGTCCAGCCCACACAATGCCGCCGCCGTCCCTCCGAGCGGCCCGTGCTCATATACCACGCTGCCACGGCTCTCCCC
TCGTTCCCCATTCTCTCGGAAGTCGCGCTCCCAAACCCTAGCT-CCCACCGCAGCGGCCCCCGCC---------------
---CCCTCCCGGTTCGCCGCTCGCTTCCTTCTCCCGCACCAGCGACCCCCCTCCCCTGCCCGGTCGCTCGCTGAATCATC
CGCGCGTTTGATCTGCAGGTGCGCGCTTGCTGCTGCAGACGAGAAGCGGCTGAGGCGAAGAAGAGGAATCGACCATGGCG
ACCCGTAAGCTCCCCGTCCCTTTCTCCAGTGCGCG-TTTTGTCCCCCACGAATTCGGTGGCATCGGAAGGGGCGGCTGTG
GCTGTCGAATCCTCTCGTTTTTTTCACTGTTCGGATTGACTGACTGGTTGGTCGCCACGGTCGCGGTGCGCGTTTCGGGG
ATGTTTTGGAGTGTCGATTTCGTGGCTAGATGTTGAGAACAGTTGGTATTTAGGCAGCATATTAGAGATGTTGTCGGTTG
GTCCTTTCGAGAGGATTCTCAGCTATCTGGATATGATTTATTCTTCGGTATCTAGGATTTAGAGTTCGAATTAATGTTTA
GATTAGCTTTGAGTTTGTGATAAGCAGCTGTTCGTTGCGCACTTTGATGAGAGATTGCAGTTGAGTTAACCACATCCCCA
TTTCATATACAAGTGGTGCTGTTGTGCTCTGAGAATATGAAATCGTGATGTTTAATCATGTGGTACACCTCCAAGTGGAT
GCTCTTGTGCCTGTGATAAGTGTTAGAAGTTCCTATGTGATTTTTCAGTACAAGTCATTACCCTTCTAGTCTGA--GTTG
CTGTACTGTTTGTGGCAACTCTGCTTCTTGTAGCCTT-TGGGTTTTGACCTTGTTCTTTGCTATGTGGTTTCTGTAGGTA
TCCAGTTTGAGAACAACTGTGAAGTTGGTGTTTTCTCCAAGCTCACAAATGCCTACTGTCTGGTTGCAATTGGAGGATCA
GAGAATTTCTACAGGTTAGCAATGGATGTTTTCTTTGGTTTAGCTCTTTGGACTTTTGGTGGAAGCAGAGGAATAACCAG
CTC-TAACTGATTGATCTTTTGAATACCTATGCAGTACATTTGAGTCTGAGCTTGCAGATGTCATTCCTGTGGTCAAGAC
CTCTATCGGTGGCACTAGAATAATTGGTCGCCTCTGCGTTGGTTAGCATTTGAACTTATACTCAGTCATTTGATCTATTC
ACTCACTTGTAGTGTACTTACCACCACCTTGATGACCCCAGGAAACAAGAATGGACTTCTCTTGCCACACACAACCACTG
ATCAAGGTACTCTGTTACAGTACCTCAATCTACGATGC-------AATTGTTTGCATAATTCTGTTATGTCTTGTGTGTT
GTTGACTTGTTACGTACTGCACAGTGCTCTTATGGTTTAATATGC-TTTGAATACGAAGTTGCTTTCTACCAGCATGCAC
TTTCAAGTTGATTTTAGTACTTCAG-GACTGTTGATACTATTGGAATTACATAGAAGTTGCTTAGAGATTTGGTATGTAT
ATAGAGGCTGGTTTCTTCAGGCACTTGTAATGTATCAGTTCTTAGAAATCTTGCAACTAGAGAGGCATGATTTCTGTAGG
CAAGTGATATTATGATTTTCGTGATGCTTATTATGTTTATGGGATTTCAAAA--TTTTCTAGAGCTTCAGCATCTGAGGA
ACTGCATACCTGATCAAGTGGTTGTTCAGCGCATCGATGAAAGGCTGTCTGCCCTTGGCAATTGCATATCCTGCAATGAC
CATGTTGCGCTCACACACCCTGACCTTGACAAGGTATGCCTATACATCCCTAGTGATGTTTGTTTGTTGACCCTGTGCCT
TTCCTAGCTTACCTTCAACTAAACTATCTCCTGTTTGGTTCCCCAGGCAACTGAGGAGCTTATTGCAGATGTGCTTGGGG
TTGAGGTGTTCCGTCAGACGATTGCAGGAAATATCCTTGTTGGCAGCTACTGTGCATTCTCTAACAGGGGTGGACTGGTA
TGTTGTTGCTGCATTTGCATACCTCTGATCTAC-----------------------------------------------
-------------------------------------ATGTTTCTGCAAAAATTGGTTAA--GTTGTTAATGTGCAATTC
CTTTGTGGCACAGGTCCATCCTCACACATCCATTGAAGATCTTGATGAGCTGTCCACACTCCTCCAAGTCCCTCTTGTCG
CTGGAACCGTGAACCGTGGTAGCGAGGTCATTGCTGCGGGCATGACGGTGAACGACTGGACCGCCTTCTGTGGCTCAGAC
ACCACGGCTACCGAGCTGTCCGTCATCGAGAGCGTCTTCAAGTTGAGAGAAGGCCAGCCCACAGCGATCGTCGATGACAT
GAGGAAGTCGCTGATTGACAGCTATGTCTAAATGATCAAA-GGGCATGCGGTGCGGTGTGGTTGGTTCTTGAGCTGTACT
CTTGGTTGACAGTAGCAAAAAAAACGTGCCTGTCTAAGCTGTTACTTCTGTCTG-TCTTCTGAATCTGGAACTACACACT
TATATGCTTTGTACTCG--TAAAGCTTACGGTATCGGAAGACGTGCTCTTGCGCTTTTGTGATATTGGAATCTTATAACT
GCGAGTGATGTTGGTTTTATAC---TCG----------------------------------------------------
-------AGCATTGGCCAACTTTGGCTACATCTGCATTGACGATTCATGCATTGTTGTTTTTGCACTTGGAAAAACATTT
TGCTCCGCTACAT-------------------------------------------------------------------
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---------------------AAAAAATATGCACAGGTCCTCAGCT----------------------------GTGTGA
TGGCAGATCAAAATGATAATCGGCACGTGCCTTTTGCTCGCTTATTGTATAC--GAGTACAAAATCATTACACATACGCA
TATAACGTGACATAGT----------------------AGTGGAAATAAATCAGTACAG---------------------
-----------GTACAGTACACCTTTACGATAATAATCAACATACTTTACGATAATAATCAACACACGGGCCGAGAACTT
GGTATATGTAGACTGAATTAGGACGCTCCGCCGATGCGGCCCTGCTTGGCGGCGGTGACGGTGATCTTCATCCCGGCCTG
GCAGTCGCCGGGGACGCTGGAGATGAAGTAGTTTGGGCCGAGGGCGAGCGTGACGCGGTCGGCCCCGGACTTGTTCACCT
TGGCGCCGCTCGGCGCGGCGCACGCCCGGTACCCCTCCGCTGACACGGCCACCACGTTGTGCGCCGTCGGGTCGTAATTG
AACACTGCATGCACATGTACCCAACAAATCCGCAGGCATCAACCAC-AATTTTCATGCAGCAGGCATCGATCCATGTATG
TATGCACGTATTTAAATT------AAGGAAAACTGTAAAAAAATGTTATATTTAGTCACATTTAGAAACTGAGGGTGTAC
GTACCAAGGACGTCGCGGCCCTTGAAGCGCTTGCCGTTGGGCCAGGAGCCGGCGTTGACGGACCAGCCGCCGCCGTCGCC
GACGGTGAACTCCGCCGACTCCGCCACCCCCGCATGGAGGAACGCGCA
>chr2B_559
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--------------------------------ATTACGTTCTTCAAAACATTTCGCAGCGAGAGAAGGCCAACAGCGATG
GGTGGGCCGAACACACGAATGAGAGCCTCGGCCCATAGCATCAGCACGGGCCGGCTGTGACGTCTCGACCTAATAGGACC
AGCCCGTTCGGCCCACACAGTTCCGCCGCCGTCTCTCCGAGCGGCCCGTGCTCATATACCACGCCGCCACGGCTCTCCCC
TCGTTCCCCATTCTCTCGGAAGCCGCGCTCCCAAACCCTAGCT-CCCACCGCAGCGGCCACCGCCTCTCGACCCCCGCCC
CT---CTCCCGGTTCGCCGCCCGCTTCCTTCTCCCGCACCAGCGATCCCTCTCCCCTGCCCGTCTGCTCGCTGAATCATC
CGCGCGTTTGATCTGCAGGTGCGCGCCTGTTGCTGCAGACGAGAAGCGGCTGAGGCGAAGA---GGAATCGACCATGGCG
ACCCGTAAGCTACCCATCCCTTT-TCCAGCGCGAG-TTTTGTCCTTCACGAATTCGGTGGCACCGGAAGGGGCGGCTGTG
GTTGTCGAACCCTCTCGATTTTTTCGTTGCTCGGATTGATTGATTGATTGGTCGCCACGGCCGCGGTGCGGGTTTCGGGG
CTGTCGTGAAGTGTCGATTCCGTGGCTAGATGTTGAGAACGGGTGTGATTTAGGCAGCGTCTTAGAGAAGGTGTGGTTTC
GTCCCTGCAGAAAGATAGTTGACCGTCTGGACATGATTTATTCTTTGGTATTTAGGATT-AGAATTCGAATTAATAATTA
GATTAGCTTTGAGTTTGTGATGAGCAGCTGTTGCTGCTGCTGTATTTATCTAGGA----------TTAACCCCGTCACCA
TTTCGTATACAAGTGGTGTTGCTGTGATCTGAGAGTATGAAATTGTGATGTTTAATCATGTGGTACACCTCCAAGTGGAT
GCCCTTGTGCCTGTGA-AAGTGTTAGAAGTTCATATGTGATTTTCG-GTATAAGTAATTACCCTTCTAGTCTGA--GTTG
CTGTACTGTTTGTGGCAACTCTGCTCCTCGTATCCTT-TGGGTTTTGACCGTGTTCTTTGCTATGTGGTTTCTGCAGGTA
TCCAGTTTGAGAACAACTGTGAAGTTGGTGTTTTCTCCAAGCTCACAAATGCCTACTGTCTGGTTGCAATTGGAGGATCA
GAGAATTTCTACAGGTTAGCAATGGATGTTTCCTTTGGTTTAGCTTTTTGGACTTTTGGTGGAAGCAGAGGAATAACTAA
CTC-TAACTGATTGATCTTTTGAATACCTATGCAGTACATTTGAGTCTGAGCTTGCAGATGTCATTCCTGTGGTCAAGAC
CTCTATCGGTGGCACTAGAATAATTGGTCGCCTCTGCGTTGGTTAGCCTTTGAACTTATAGTCTGTCATTTGAGCTATTC
ACTCACTTGTAGTGTACTTACCACCACCTTGATGACCCCAGGAAACAAGAATGGACTTCTCTTGCCACACACAACCACTG
ATCAAGGTACTTTATTTCGGAACCTCAATCTACAATGT-------AATTGTTTACATAATTCTGTTATGTCTTGTGTGTT
GTTG--------CGAACCGCACAGTTCTCTTATGGTTTAATATGCTTTTGAATACGAAGTTGCTATCTACCAGCATTCAT
TTTCAAGTTGATTTTAGTACTTAAAAGACTGTTGATACCATTGGAGTTACATAGAAGTTGCTTAGAGATTCGTTATGTCT
ACAGATGTTGGTTTCTTCAGTCATTTCTGATGTTTCAGTTCTTAGACATCTTGCTTCTAGAGAGGCATGATTTGTGTAGT
TAAGTGATATTATGATTTTTGTGATGCTTATTATTTTTATGGGGTTTTGAAC-TTTTGCTAGAGCTTCAGCATCTGAGGA
ACTGCATACCTGATCAAGTGGTTGTTCAGCGCATCGATGAGAGGCTGTCTGCCCTTGGCAATTGCATATCCTGCAATGAC
CATGTTGCGCTCACACACCCTGACCTTGACAAGGTATGCCTATACATCCCTAGTGATGTTTATTTGCTGAACCTGTGCCT
TTCCTAGCTTACCT-CAACTAAAGTATCTCCTGTTTGGTTCCCCAGGCAACTGAGGAGCTTATTGCAGATGTGCTTGGGG
TTGAGGTGTTCCGTCAGACGATTGCAGGAAATATCCTTGTTGGCAGCTACTGTGCATTCTCTAACAGGGGTGGACTGGTA
TGGTGTTGCTGCATTTGCATCCCTCTGATCTAT-----------------------------------------------
-------------------------------------CTGTTTCTGCAAAAATTGGTTAAG-GTTGTTAATGTGCAATTC
CTTTGCGGCACAGGTCCATCCTCACACATCCATTGAAGATCTTGATGAGCTGTCCACACTCCTCCAAGTCCCTCTTGTCG
CTGGAACCGTGAACCGTGGTAGCGAGGTCATTGCTGCGGGCATGACGGTGAACGATTGGACCGCCTTCTGTGGCTCAGAC
ACAACGGCTACCGAGCTGTCCGTCATCGAGAGCGTCTTCAAGTTGAGAGAAGGCCAGCCCACAGCGATCGTCGATGACAT
GAGGAAGTCGCTGATTGACAGCTATGTCTAAATGATCAAAAGGGCATGCAGTGCGGTG----TGGTTCTTGAGCTGTACT
CTTGGTTGACAGTAGCAAAAAAG-CGTGCCTGTCTAAGCTGTTACTTCTGTCTG-TCTTCTGAATTTGGGATTGCAAACT
--TATGCTTTGTACTGG--TAAAGCTTACGGTATCGGGAGATGCGCAACCTTATACTTCTAGTCCAGTAT----------
-------ATGTTGGTTTTATAT---TCTACTCCCTCCGTCCAGAAATACTTGTCACACGATAAGTATTTCCTGACGGAGG
GAGTACTAGCATTGACGAACTTCGGTTACATCTACGTTGACGATTCATGCA---TTGTTTTTCCACTTGGAGAAATTTCT
TGCTCTGTTATATAAAAAAATACGGAAATGTTAACGCCCACACGTGTGGGCGTTAGCCAACTCGCCCACACGCCTTCATC
ACCGTCCAACGCCTTTTGCACGAATGTTGGCGTAAAAAGGCTGATTTTGTGTGCTATGTAGGACAAGGCGTGTGTGTGGT
GTGAGACATAGTTCGCCCACACATCCAATTTGCCACATGGAGGGACCGGTGTGTGGACGTTTAGCAGTTCACCCACACAC
CAGTTTTCAGTCACGCACAAGGGATGATGTGTCGGCGTTTGCCATCTCGTCCACACGTCCGCCTCCTCTCTCACACTCAA
GCTGCCAGTTGCCATGCGTTTTGCAGCGTACATGGCAATTGCCCTAGTGTGATTGCAAGCAGATGGCAACTCTTTCTTTC
TTTTATCCAAACATGTCAGTTGCCATATTTTTTGCATGGTACTCCCTCCGTCCGGGTTTATTAGGCCTAAAGACAACTTT
TCTTAGACCAAGACACATAGTAATTTGCTCACATTAATTCTTTCATTCCACTCCCAATGCACTCTCTCACATGCATGCAG
CCAATGAAAAAGCACACATGAAGTGTATTAACTTTTCAGCCATGGCACCAACAACAATAGCTTTCAATACAACCAATGAA
ATGGTTGCATGCATGCACCTTTCCAACACGGGGCCTTATAAAAGGGGACATGCTTGTGATGCTGAGAGGCCTAATAAATC
CGGACGGAGGGAGTACTTGGCAAACTGCCCTAGCGTGCATGTAAGGAGATGTCAACTCTTTTTTTTACATGGCAACTGCC
CTAACGTGCTTGTGAGCACATGGCAACTCTCTCTTTTACCCGAACATGTTTTTTTGCCATGCCATTTTTTCAGTGCTAGA
CGGCAACTGCCTAGTGTTAGTAGGTGACAACTTCTAAAGTTTTGAAATTATGGCAACTGCAGTAGACCAGACCACACATG
GCAACAGCTGTAGTTGTTCAAAAAATGGCAATCTGAAAGTTTGACTTGAGATGGCAACTGCAGTTGAGCAGACATGACAA
CTGTAGTTGTCCGATATGGCAACCGTAGTTCAGCAACATAGCAACTGCACTTAAACGAACATAGACGAGGGTCCGGCCCA
TGGCAACTGCGTGCACGCGATAAAGTGTCACGTGAGACATGCAGGACCACGAGGCACGAGGCCTGACGTACCGAATTTGT
GGGCGTTATCTATTTTCGCCCACACGCACGCGTGTAAGAGGGACCGGAAGGGAAAAAAAGAGCCGTGTGAACGCTAATTG
TTTTGCCCACACACAAACGTGTGGGCTAGTCCTCTTAGGCACCACACAGAACGTGTGGACAAATTTCTTAACGTCCACAC
ATATGGCAGTTATCGGGACCCAAAAAATACGCACAGGTCCTCAGCTCTGGGCAGAGCTTTTATTTCCAACCAGCGTGTGA
TGGCAGATGAAAAAGATAATCAGCACATGCCTCTTGCTCGCTTATTGTATATAAGAGTACAAAATCATTACACATGTTAT
AACG----------TAACACAAGAGGCACGAATGATGGAGTGGTAATAAATATTGGATA---------------------
----------------------------------------------------------------CATGGGCCGAGAACTT
GGTATATGTAGACTGAATTAGGACGCTCCGCCGACGCGGCCCTGCTTCCTGGCGACGACGGCGATCTTGATGCCGGCCTG
GCACTGGGCGGGGACGCTGCAGATGAAGTAGCTTGGGCCGAGGGCGAGCGTGACGCGGTCGGCCCCGGACTTGAGCACCT
TGGCGCCGCGCCGAGCGGCGCACGCCTCGTACTCCGACGCGGACACCTTCACCACGTCCAGCGCCGTCGGGCCGT-----
--------------------------------------------------------------------------------
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------------------------------------------------
>SNPs
-SSS-SSSSSSSS----------S---------S---------S--------SSSS--S-S---S------S-S------
---SS-SSSSSSS-----------------SSS---------S--------------S----------------------
----------------S-SS--------S--------------S-------------S-----------S------S---
-----S--------------------S----------------------S------S-------SS-----S-----SS-
-S-------S-----SS----S-----------------------S-------------------S---S----------
--------------------------------------------S----S---S---------SS---------S---S-
---S---SS---------S---S--------------------S--S-----S---S-S----S-S--S----------S
--S-----------------------------------------------------------------------------
---S------------SSSSSS-S-SSS-SS---S--------S--S------S--------S---S-------------
--------------S--------------S---------------------------------S----------------
-------------------------------------------S------------------------------------
-SS-----------------------------------S-----------------------------------------
--------------------------------------------------------------------------------
-----------------------------------S--------------------------------SS----------
--S----------------------------------------------------------S------------------
----------------------------------------S------------------------------------S--
------------------------------------------------------S----SSS--------S---------
---------S---------SS-------------------S--SS-------------------------SS--------
---------------------------------S-------------------------S-----S-S---S--------
-S--------------S-------------------------S-------------------S--S---S--SSSS----
----S-S-------S------S-----------S---S------------S-----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------S-----------------------------
---S-------S--S------------S----------------------------------------------------
---------------------------------------------------------S--S---S-------------S-
-------------------------------------------------------------S------------------
----------------S------S-----S-S----S-SSSSSSS----S------S-----------------------
------------S-----------------------------S------------------------------S-S----
-----------------------S-----------------S--------------------------------------
-----------------------S--S------S--S---------S-------------S-----------------SS
---S------------------S-------S------------SSS---S-SS---------------------------
-------------------------------------------------S------------------------------
---------------------------------------------------------------------S----------
-S---------SSS---------------------S-SS-----------------------------------------
-------------------S------------------------------------------------------------
-------S--------------S----------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------------SS---S--------------
-------SS---------------------------------------------------------------------S-
-------------------------------------------------------------------------S------
-----S-----S--------------------------------------------------S-----------------
--------------------------------------------------------------------------------
----------------------S-------------------------------S-------------------------
-----------------SS---------S-------------------------------------S-------------
-------------------SSSSSS-------------------------------------------------------
-------------------------------------------------S------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------SS-----------------------------------------------------------------
------S--S----------S-S-------S------SS--S--SSSSSSS--SS-SSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSS----------------S-----------------------------------S----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------S-----
----------------------------------------S-----------------------S-----------S---
-------------S-S------------------S-----------S---------------SS-S-S------------
----------SSSSSSS-SSSSSS--SS-------S-----S--S---SS-------------------S----------
--------------------------------------------------------------------------------
------------------------------------------S-----
>forward_694
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------GTAGCATCATCATGGGCCGT--------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------------------------
>reverse_1593
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------TGGTGTTG
CTGTGCAGTTTG--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------
>forward_1076
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------GTCCCTTTTCCAGTGCGAGT--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------
>reverse_2857
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------CGCTGGGGGAGTTCAGTTTA----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------
>forward_1615
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------TGTTG
CTGTGCAGTTTGTGT-----------------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_3183
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------GGCGATCGTCGATGACAT
GA------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------
>forward_3132
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------GGTCAGAC
ACAACCGCTACT--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------
>reverse_5505
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------TGTCGGGTCGTAGTTG
AACA----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------
