>input_sequence_36656
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-----------------------------------------------------------------ATGGACACATTCCTC
TTCCTTGCCATTCTTCCATTGCTCACTGCTCTGCCATGCTCATATGCTCAGTCGATGCTAAGCACTGGCTCATCCTTATC
TGTAGAAGAGCATAGGCAGACCTTCCTTACCTCACCAAATGATGATTTTTCTTGCGGCTTCTATGAAGTTGGAGAGAATG
CATTCTCCTTCTCTATCTGGTTCACCACCACCATGGAAAAGACTGTTGTATGGTCTGCAAACCCCAGGTCCTTGGTGAAT
GGCCATGGTTCCATGGTGTCTCTGAACCATAATGGAAACTTGGTCCTCACTGATGTCAATGGCACCGTAACTTGGGAGAG
CAAGACAAGCTCTGGTGAGGGCACGGTGGTTTCCCTTCTTGACACCGGCAACCTCATAATCAAAGACTACACTGGTGCAA
ATTTGTGGGAAAGCTTCTCTTCACCGACAGATACATTGCTGCCTTTACAGACTCTCAAAAAAGGTACAAAGCTGGTCTCC
GGTTATTACAGCCTTTATTTTGACAATGACAATGTGCTACGCCTCATGTATGATAGTCCAGAAATATCAAGTATCTATTG
GCCAAGTGCAGACTACACAGTGTTTCAAAATGGGCGGACTAGCTACAACAGCTCTAGGATTGCAGTCCTCGACACTGAAG
GATTTTTCCTCTCAAGTGATGGGCTGAATGTTAAGGCTTCTGATTGGGGTAATGGAGTCAAGCGAAGGCTTACAATTGGG
TCTGATGGAAACCTCAGAATGTACAGTCTGAATGTGTCAAATGGGAGTTGGATAGTATCATGGCAGGCTATAGCAAAATT
GTGCGATGTGCATGGGCTATGTGGACAAAATGGGATATGTGAGTTCTTGCCAAGTTTCAGGTGTTCATGTCCCCCAGGAT
ATGAGATGACCGATCCGGAAAACTGGAACAGAGGTTGCAAGCCGCAATTCAGCAAAGGCTGCAGCAAAGCAGAAGAGTTT
GACTTCATCAAGCTCCCTCAAACCAACTTTTATGGCTTTGATCTGACCAATAATGTGTCCGTCTCACTTGAAGAATGTAA
AAAGACATGCTTGGACATTTGCTCCTGCTCAGCTCTCACGTAC-------------------------------------
-----------------------------------------------AAGGCAGGATCTGGACTTTGCTACACCAAAGCT
GTACTCTTCAATGGTTACAGCTCCACAAATTTTCCTGGCGACAACTATATCAAACTGCCCAAGAATATGAGCATCTCCAG
ACAGTCCCGTATCACATGCAATCCGGATATTCGAGTGGTTGTACAAGGATCTGCAAGTATGTATGGAATGAATGATGTCA
ACAAGAGTTATACAATTTATTATGTGTTCGCAGCAATACTGGGAGCCCTAGTCTTGCTCTTTATCGGTACAAGCTGGTCG
TTTCTTTACAGCAAGCAAAATATACCTAAGTCAATGGAAGAAGGTTATAGGACTGTGATGAGCCAGTTCAGGATGTTCAT
CTACAGGGAATTACGGGAAGCAACTGGAAAGTTCAAGGAAGAGATTGGAAGAGGGGGTTCGGGAATTGTTTATAGAGGGG
TACTTGAAGATAAGAGAGTGGTGGCAGTGAAGAAACTAACTAGCGTTTCACATAGTGAGGAGGAATTCTGGGCAGAAATG
AATATAATCGGAAGGATCAACCATATGAATTTAGTAAGGGTGTGGGGGTTTTGCTCTGAGGGTCAACACAAACTGCTGGT
GTACGAGTATGTAGAGAGTGAATCACTTGACAAGTTTATATTTGGTAATGTAAGTGCTGAGAGATTACTTGCATGGAGCC
AACGATTCAAAATAGCACTAGGAACAGCAAGAGGCTTGGCGTACCTCCATCATGAGTGCCTTGAATGGGTAATCCATTGT
GATATAAAGCCAGAGAACATACTCCTGACCCGAGACTTCGAAGCAAAGATAGCAGACTTCGGACTAGCCAAACTCTCAAA
GAGAGACAGTTCCAGTTTCAATCTCACCCACATGAGAGGAACAATGGGCTACATGGCGCCAGAGTGGGCGCTGAATTTGC
CGATCGACGCAAAGGTTGATGTATACAGTTATGGCGTTGTACTTCTCGAGATTGTGACTGGAAATAGGATCTCAAGTGGG
ATTACAGTGGATGGGAAAGAGGTGGAGTTT-GACAGTTTGTGCATGCAGTTAAAGAATTGCTGGAGAGTGGAGATGTCAA
GGTTATAG------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------
>chr3A_1_TraesCS3A01G246200
AGATAGAGAAGCATAGCGAAGTGCTTCAATGCAATGATCATATATCAATACATAGGAACCTAGTGTGAGGAACATGCACC
TA-TTTGCCTTGCACGCAAGTATAAGAAGATTCCCAGAAGAAACGGAATAAAAATAACACAAGCATGATCTTTAATTTGG
CATCGCGTGACATATAATAAATGATCAATATCAGGGGACAGTGACAATACCATGATAACGCCAAGCTACCCGGTCATAAG
TCCATGGCTCCATGCCAAGGATCGGTGGCAGTGACACCATGGCTATCAGGGCATTAGGCAGGAGGCCTAACCACTTGTGG
CTTGTCCACCTCCTCTTCTTTTTTCTAACAAGTTGTCCACCTCTTCAAGTGGGCAATAACTACCATAGCATGTCAAAGAC
GGCATACCATAAACACACTCACAAATAAAATGTAGCTCAAGCTTGCTAAATGATTATCATCATTGCCCAGAAGAAGAAAG
GTTATGGTGATGCCAGCTTGTC----------------------ACTAACGAACTTCTGACGCCAATTCAATCAATGATT
AGCATCTCATAACTAGCTCAGGACCAACATCATCAAGGTCCATAATAAACTAATGCTCAGAAAAGGAGGCCAATATATGA
AACAAAAGGATAATCATAATTAGCAAAAAGTAAGTAATAAAACCATGGGACAAACTATTTTGCACCATGCAGCTTTCGTC
AATTTGGACTAAAAACTTCCTAAAATGGAGAATTTCAAAATAAGGAAAAAAAATCCCATCGCGGTCCTCTCTGTCTAGAA
GCCACCACGACTGACTGAGATAAGAATCATCATAAAATAAAAAA--TAACCCATTCGCATGTTAGACCAAGAAACTGAAG
CATGAGTTCAAATTGGACTCTATGAAAGGGCCTTCGCAGCAAGTGGGAAATTAATTAGGACCACATGCATACATACATGA
TGAAAATAGCAAGCATAAATGGAAGCAGTACCTTCGGTCATACAACTCGCTGAACACCAAGAAAAATGGACACATTCCTC
TTCCTTGCCATTCTTCCATTGCTCACTGCTCTGCCATGCTCATATGCTCAGTCGATGCTAAGCACTGGCTCATCCTTATC
TGTAGAAGAGCATAGGCAGACCTTCCTTACCTCACCAAATGATGATTTTTCTTGCGGCTTCTATGAAGTTGGAGAGAATG
CATTCTCCTTCTCTATCTGGTTCACCACCACCATGGAAAAGACTGTTGTATGGTCTGCAAACCCCAGGTCCTTGGTGAAT
GGCCATGGTTCCATGGTGTCTCTGAACCATAATGGAAACTTGGTCCTCACTGATGTCAATGGCACCGTAACTTGGGAGAG
CAAGACAAGCTCTGGTGAGGGCACGGTGGTTTCCCTTCTTGACACCGGCAACCTCATAATCAAAGACTACACTGGTGCAA
ATTTGTGGGAAAGCTTCTCTTCACCGACAGATACATTGCTGCCTTTACAGACTCTCAAAAAAGGTACAAAGCTGGTCTCC
GGTTATTACAGCCTTTATTTTGACAATGACAATGTGCTACGCCTCATGTATGATAGTCCAGAAATATCAAGTATCTATTG
GCCAAGTGCAGACTACACAGTGTTTCAAAATGGGCGGACTAGCTACAACAGCTCTAGGATTGCAGTCCTCGACACTGAAG
GATTTTTCCTCTCAAGTGATGGGCTGAATGTTAAGGCTTCTGATTGGGGTAATGGAGTCAAGCGAAGGCTTACAATTGGG
TCTGATGGAAACCTCAGAATGTACAGTCTGAATGTGTCAAATGGGAGTTGGATAGTATCATGGCAGGCTATAGCAAAATT
GTGCGATGTGCATGGGCTATGTGGACAAAATGGGATATGTGAGTTCTTGCCAAGTTTCAGGTGTTCATGTCCCCCAGGAT
ATGAGATGACCGATCCGGAAAACTGGAACAGAGGTTGCAAGCCGCAATTCAGCAAAGGCTGCAGCAAAGCAGAAGAGTTT
GACTTCATCAAGCTCCCTCAAACCAACTTTTATGGCTTTGATCTGACCAATAATGTGTCCGTCTCACTTGAAGAATGTAA
AAAGACATGCTTGGACATTTGCTCCTGCTCAGCTCTCACGTAC-------------------------------------
-----------------------------------------------AAGGCAGGATCTGGACTTTGCTACACCAAAGCT
GTACTCTTCAATGGTTACAGCTCCACAAATTTTCCTGGCGACAACTATATCAAACTGCCCAAGAATATGAGCATCTCCAG
ACAGTCCCGTATCACATGCAATCCGGATATTCGAGTGGTTGTACAAGGATCTGCAAGTATGTATGGAATGAATGATGTCA
ACAAGAGTTATACAATTTATTATGTGTTCGCAGCAATACTGGGAGCCCTAGTCTTGCTCTTTATCGGTACAAGCTGGTCG
TTTCTTTACAGCAAGCAAAATATACCTAAGTCAATGGAAGAAGGTTATAGGACTGTGATGAGCCAGTTCAGGATGTTCAT
CTACAGGGAATTACGGGAAGCAACTGGAAAGTTCAAGGAAGAGATTGGAAGAGGGGGTTCGGGAATTGTTTATAGAGGGG
TACTTGAAGATAAGAGAGTGGTGGCAGTGAAGAAACTAACTAGCGTTTCACATAGTGAGGAGGAATTCTGGGCAGAAATG
AATATAATCGGAAGGATCAACCATATGAATTTAGTAAGGGTGTGGGGGTTTTGCTCTGAGGGTCAACACAAACTGCTGGT
GTACGAGTATGTAGAGAGTGAATCACTTGACAAGTTTATATTTGGTAATGTAAGTGCTGAGAGATTACTTGCATGGAGCC
AACGATTCAAAATAGCACTAGGAACAGCAAGAGGCTTGGCGTACCTCCATCATGAGTGCCTTGAATGGGTAATCCATTGT
GATATAAAGCCAGAGAACATACTCCTGACCCGAGACTTCGAAGCAAAGATAGCAGACTTCGGACTAGCCAAACTCTCAAA
GAGAGACAGTTCCAGTTTCAATCTCACCCACATGAGAGGAACAATGGGCTACATGGCGCCAGAGTGGGCGCTGAATTTGC
CGATCGACGCAAAGGTTGATGTATACAGTTATGGCGTTGTACTTCTCGAGATTGTGACTGGAAATAGGATCTCAAGTGGG
ATTACAGTGGATGGGAAAGAGGTGGAGTTT-GACAGTTTGTGCATGCAGTTAAAGAATTGCTGGAGAGTGGAGATGTCAA
GGTTATAGCCGATGCTAGACTGAATGGCCATTTCAATCCTGAGCAAGTGGCGGTAATGGTGAAATTGGCTTTATCTTGTC
TCGAAGAAAGAAACAGCAGACCTACAATGAATGAAATTGTAAAAGCTCTACTGGCATGTGATGACGAAGACAATCACCCA
GCCCACTCATGGTGACCGGCAATAAACAACAGTGTATCAATTGCAATAAGAAGAATTGGTCTAGTATATTGCTTGATATT
TGAAAGTAGAG---------------GAAAATG---------------TCAGGTTGTGTGTTGCATAAATCTTTCTGTAG
ATGGAACAGTAGCTGCACTGTATTGAATGTTGTCTACATGAATTCTTGCATGAAACATAGTGGGCTTATTTGTATAGTTT
TTCCTTACAGAGAAAAAAGAAAAGAAAAGAAGATTTTAGTCTGCATAACTGTTTGATCTTCTAGAGCATGTAACAACTTC
CAAAGATTCCCACTGTTTCTTCAAAAATCCGTTCTTCCATTCGAGATCCCTTCAGTGCAACCAGAGATTGTGTGACTCTT
GTTAGCAAATAGCCAGTTAACAACTGACAACATTCACTCATTGAAATCTTGTACAAATATAAGATACTGATAAATGTGAC
CAATAACTC-AAAGGAAAATTTGCTAGTAGCTAAAATACTAGCACAAATCATTTCAGCTATCAATGTCTTGCTGAATTAG
CAGTGGAATACTGACTTGAATGGTCCATCGATCTAGTACTACGGAACCACTACATTTTGGCACTAATTTATGGTCGAACT
TTCGGCTGGTAACATAATCAGTAAAGTGATCCAGTCATCCTTGGACTACATTATTAGTCACGATGGTAGAAAGTACAAAT
CGAGCACCAGGGCCAAATTATTTTCCCCGGCAATATGGTAAAACTTTAGCACTTATAACTGTGTCAGCTTAACTGATCTT
TCAGAACACTGCTCAAGTTGGGAATATCTACAATCCTTGGAGTAACAAAAATGATTGATTTAGCTTCCTGTTCAGAAAG
>chr3B_1
AGATAGAGAAGCATAGCGAAGTGCTTCAATACAATGATCATATATCAATACAC-GGGACCTAGTGTGAGGAACATGCATT
TAGTTTGCCTTGCACGCAAGTATAAGAAGATTCCCAGAAGAAACGGAATAAAAATAACACAAGCATGATCTTTAATTTGG
CATCGCGTGACATATAATAAATGATCAATATCAGGGGACAGTGACAATACCATGATAACGCCAAGCTACCCGGTCAGAAG
TCCATGGCTCCATGCTAAGGATCGGTGG------CACCATGGCTATCAGGGCATTAGGCAGGCGGCCTAACCACTTGTGG
CTTCTCCACCTGATCTTCTTTTCTCTAACAAGTTGTCCACCTCTTCAAGTGGGCAATAGCTACCATAGCATGTCAAAGAC
GGTATAACATAAACACACTCACAAATAAAATGTAGCTCAAGCTTGCTAAATGATTATCATCGTTGCCCAGAAGAAGAAAG
GTTATGGTGATGCCAGCTTGTCACTAACGAACTTCTAGCTTGTCACTAGCGAACTTCTGACGCCAATTCAATCAAGGATT
AGCATCTCATAACTATCTCAGTACCAACATCATCAAGGTCCATAATAAACTAATGCTCAGAAAAGAAGGCCAATAT--GA
AACAAAAGGACAATCATAATTTGCGAAAAATCAGTAATAAAACCATGGGACAAACTATTTTGCACCGTGCAGCTAACGTC
AATTTGGACTTCAAACTTCCTAAAAAGGAAAATTTCAAAATA---AAAAAATATCCCATCACAGTCCTCTCTGTCTAGAA
GCCACCACGACTGACTGAGATAAGAATCATCATAAAG-AAAAAA--TAACCTATTCGCATGTTAGACCAAGAAACTGAAG
CATGAGTTCAAATTGGACTCTATGAAAGGGCCTTCGCAGCAAGTGGGAAATTAATTAGGACCACATGCATACATACATGA
TGAAAATGGCAAGCATAAATGGAAGCAGTAGCTTCGGCCATACAACTCGCCGAACCCCAAGAAAAATGGACACATTCCTC
TTCCTTATCATTCTTCCATTGCTCACCACTCTGCCATGCTCATATGCTCAGTCGATGCTAAGCACTGGCTCATCCTTATT
TGTAGAAGAGCATAGGCAGACCTTCCTTACCTCACCAAATGATGATTTCTCTTGCGGCTTCTATGAAGTTGGAGAGAATG
CATTCTCCTTCTCTATCTGGTTCACCACCACCATGGAAAAGACTGTTGTATGGTCTGCAAACCCCAGGTCCTTGGTGAAT
GGCCATGGTTCCATGGTGTCCCTGAACCATAATGGAAACTTGGTCCTCACTGATGTCAATGGCACAGTCACTTGGGAGAG
CAAGACAAGCTCTGGGGAGGGCACGGTGGTTTCCCTTCTTGACACTGGCAACCTCATAATCAAAGACTCCACTGGTGCAA
ATTTGTGGGAAAGCTTCTCTTCACCGACAGATACATTGCTGCCTTTACAGACTCTCAAAAAAGGTACAAGGCTGGTCTCC
AGTTATTACAGCCTTTATTTCGACAACGACAATGTGCTACGCCTCATGTATGATAGTCCAGAAATATCAAGTATCTATTG
GCCAAGTGCAGACTACACAGTGCCTCAAAGTGGGCGGACTAGCTACAACAGCTCTAGGATTGCAGTCCTCGACACTGAAG
GATTTTTCCTCTCAAGTGATGGGCTGAATGTCAAGGCTTCTGATTGGGGTAATGGCGTCAAGAGAAGGCTGACAATTGGT
TCTGATGGAAACCTCAGAATGTACAGTCTGAATGTGTTAAATGGGAGTTGGATAATATCATGGCAGGCTATAGCAAAACT
GTGCGATGTGCATGGGCTATGTGGAAAAAATGGGATATGTGAGTTCTTGCCAAGTTTCAGGTGTTCATGTCCCCCAGGAT
ATGAGATGACCGATCCGCAAAACTGGAACAAAGGTTGCAAGCCACAATTCAGTAAAAGCTGCAGCAAAGCAGAAGAGTTT
GACTTCATCAAGCTCCCTCAAACCGACTTTTATGGCTTTGATCTGACCAATAATGTGTCC---TCACTTGAAGAATGTAA
AAAGATGTGCTTGAACATTTGCTCCTGCTCAGCTCTCACGTAC-------------------------------------
-----------------------------------------------AAGGCGGGATATGGACTTTGCTACACCAAAGCT
GTACTCTTCAATGGTTACAGCTCCCCAAATTTTCCTGGCGATAACTATATCAAACTACCCAAGAATATGAGCATCTCCAG
ACAATCTCGTCTCACATGCAATCCGGATATTCCAGTGCATGTACAAGGATCTGCAAGTATGTATGGAATGAATGATGTCA
CCAAGAGTTATACAATTTATTATGTGTTTGCAACAATATTGGGAGCCCTAGTCTTGCTCTTTATCGGTACAAGCTGGTCG
TTTCTTTACAGCAAGCAAAACATACCTAAGTCAATGGAAGAAGGCTATAGGACTGTGATGAGCCAGTTCAGGATGTTCAT
CTATAGGGAATTACGGGAAGCGACTGGAAAGTTCAAGGAAGAGATTGGAAGAGGGGGTTCTGGAATTGTTTATAGAGGGG
TACTTGAAGATAAGAGAGTGGTGGCAGTGAAGAAACTAACCAGCGTTTCACATAGCGAGGAGGAATTCTGGGCAGAAATG
AATATAATCGGAAGGATCAACCATATGAATTTAGTAAGGATGTGGGGGTTTTGCTCCGAGGGACAACACAAACTGCTGGT
GTACGAGTACGTGGAGAATGAGTCCCTTGATAAGTTTATATTTGGTAATGTAAGTACTGAGAGATTACTTGCATGGAGCC
AACGATTCAAAATAGCACTAGGAACAGCAAGAGGCTTGGCGTACCTCCATCATGAGTGCCTTGAGTGGGTGATCCATTGT
GATATAAAGCCAGAGAACATACTCCTGACCCGAGACTTCGAAGCAAAGATAGCAGACTTCGGACTAGCCAAACTCTCAAA
GAGAGACAGTTCCAGTTTCAATCTCACCCACATGAGAGGAACAATGGGCTACATGGCGCCAGAGTGGGCACTGAATTTGT
CGATCGACGCAAAGGTTGATGTATACAGTTGTGGCGTTGTACTTCTCGAGATTGTGACTGGAAATAGGATCTCAAGTGGG
ATTACAGTGGATGGGAAAGAGGTGGAGTTTAGACAGTTTGTGCATGCAGTTAAAGAATTGCTGGAGAGTGGAGATGTCAA
GGTTATAGCTGATGCTAGACTGAATGGCCATTTCAATCCTGAGCAAGTGCCGGTAATGGTGAAATTGGCTTTATCTTGTC
TCGAAGAAAGAAACAGCAGACCTACAATGAATGAAATTGTAAAAGCTCTACTGACATGTGATGACGAAGACAATCACCCA
GCCTACTCATGGTGACCGGCAATAAACAACAGTGTATCAATTGCAATAAGAAGAATTGGTCTAGTATATTGCTTGATATT
TGAAAGTAGAAGAAAATGTTGCTACAGAAAATG---------------TCAGGTTGTGTGTTGCATAAATCTTTCTGTAG
ATGGAACACTAACTGCACTGCATTGAATGTTGTCTACATGAATTCTTGCATGAAACATAGTGGGCTTATTTGGATAGTTT
TTCCTTACAGAAAAAAAAGAAAAGAAAAGAAGATTTTAGTCTGCATAACTGTTTGATCTTCTAGAGCATGTAACAACTTC
CAAAGATTCCCGCTGTTTCTTCAAAAATCCGTTCTTCCATTCGAGATCCCTTCAGTGCAACCAGAGACCGCGTGACTCTT
GTTAGCAAATAGCCAGTTAACAACTGACAACATTCACTCAATGAAATCTTGTACAAATATAAGATACTGATAAATGTGAC
CAATAACTC-AAAGGAAAATTTGCTAGTAGCTAAAATACTAGCACAAATCATTTCAGCTATCAATGTCTTGCTGAATTAG
CAGTGGAATACTGACTCGAATGGTCCATCGATCTAGTACTACGGGACCACTACATTTTGGCACCAATTTATGGTCAAACT
TTCGGCTGGTAACATAATCAGTAAAGTGATCCAGTCATCCTTGGACTACATTATTAGTCACGATGGTAGAAAGTACAAAT
CGAGCACCAGGGCCAAATTATTTTTTCCAAAAATATGGGAAAACTTTAGCACTTATAACTGTATCAGCTTAA--------
TCAGAACACTGCTCAAGTTCGGAATATCTGCAATCGTTGGAGTAACAAAAATGATTGATTTAGCTTCCTGTTCAGAAAG
>chr3D_1
AGATAGAGAAGCATAGCGAAGTGCTTCAATACAATGATCATATATCAATACATAGGAACCTAGTGTGAGGAACACGCATT
TAGTTTGCCTTGCACGCAAGTATAAGAAGATTCCCAGAAGAAACAGAATAAAAATAACACAGGCATGATCTTTAATTTGG
CATCGCACGACATATAATAAATGATCAATATCAGGGGACAGTGACAATACCATGATAACGCCAAGCTACCCGGTCAGAAG
TCCATGGCTCCATGCTAAGGATCGGTGG------CACCATGGCTATCAGGGCATTAGGTAGGCGGCCTAACCACTTGTGG
CTTGTCCACCTCATCTTCTTTTTTCTAACAAGTTGTCCACCTCTTCAAGTGGGCAATAGCTACCATAGCATGTCAAAGAC
GGCATAACATAAACACACTCACAAATAAAATGTAGCTCAAGCTTGCTAAATGATTATCATCGTTGCCCAGAAGAAGAAAG
GTTATGGTGATGCCAGCTTGTC----------------------ACTAACAAACTTCTGACACCAATTCAATCAAGGATT
AGCATCTCATAACTAGCTCAGTACCAACATCATCAAGGTCCATAATAAACTAATGCTCAGAAAAGAAGGCCAATAT--GA
AACAAAAGGACAATCATAATTTGCGAAAAATCAGTAATAAAACCATGGGACAAACTATTTTGCACCGTGCAGCTAACGTC
AATTTGGACTTCAAACTTCCTAAAAAGGAAATGTCA-----A---AAAAAAATTCCCATCGCAGTCCTCTCTGTCTAGAA
GCCACCACGACTGACTGAGATAAGAATCATCATAAAG-AAAAAAAATAACCTATTCGCATGTTAGACCAAGAAACTGAAG
CATGAGTTCAAATTGGACTCTATGAAAGGGCCTTCGCAGCAAGTGGGAAATTAATTAGGACCACATGCATACATACATGA
TGAAAATAGCAAGCATAAATGGAAGCAGTACCCTCGGCCATACAACTCGCTGAACACCAAGAAAAATGGACACATTCCTC
TTCCTTACCATTCTTCCATTGCTCACCGCTCTGCCATGCTCATATGCTCAGTCGATGCTAAGCACTCGCTCATCCTTATC
TGTAGAAGAGCATAGGCAGACCTTCCTTACCTCACCAAATGATGATTTTTCTTGCGGCTTCTATGAAGTTGGAGAGAATG
CATTCTCCTTCTCTATCTGGTTCACCAACACCATGGAAAAGACTGTTGTATGGTCTGCAAACCCCAGGTCCTTGGTGAAT
GGCCATGGTTCCATGGTGTCTCTGAACCATAATGGAAACTTGGTCCTCGCTGATGTCAATGGCACCGTGACTTGGGAGAG
CAAGACAAGCTCTGGCGAGGGCACGGTGGTTTCCCTTCTTGACACCGGCAACCTCATAATCAAAGACTACACTGGTGCAA
ATTTGTGGGAAAGCTTCTCTTCACCGACGGATACATTGCT----------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------------ACCAATAATGTGTCCGTCTCACTTGAAGAATGTAA
AAAGACATGCTTGGACATTTGCTCCTGCTCAGCTCTCACGTACTCCCTCCTTTCCAAAATAGATGACCCAACTTTGTACT
AAAGTTAGTACAAAGTTGGGTCATCTATTTTAGAACGGAGGGAGTACAAGGCAGGATCTGGATTTTGCTACACCAAAGCT
GTACTCTTCAATGGTTACAGCTCCACAAATTTTCCTGGCGACAACTATGTCAAACTGCCAAAGAATATGAGCATCTCCAG
ACAGTCTCATATCACATGCAATCCGGATATTCGAGTGGTTGTACAAGGATCTGCAAGTATGTATGGAATGAATGATGTCA
ACAAGAGTTATACAATTTATTATGTGTTCGCAGCAATACTGGGAGCCCTAGTCTTGCTCTTTATCGGTACAAGCTGGTCG
TTTCTTTACAGCAAGCAAAATATACCTAAGTCAATGGAAGAAGGTTATAGGACTGTGATGAGCCAGTTCAGGATGTTCAT
CTACAGGGAATTACGGGAAGCAACTGGAAAGTTCAAGGAAGAGATTGGAAGAGGGGGTTCGGGAATTGTTTATAGAGGGG
TACTTGAAGATAAGAGAGTGGTGGCAGTGAAGAAACTAACTAGCGTTTCACATAGTGAGGAGGAATTCTGGGCAGAAATG
AATATAATTGGAAGGATCAACCATATGAATTTAGTAAGGATGTGGGGGTTTTGCTCTGAGGGTCAACACAAACTGCTGGT
GTACGAGTATGTGGAGAATGAATCACTTGACAAGTTTATATTTGGTAATGTAAGTGCTGAGAGATTACTTGCATGGAGCC
AACGATTCAAAATAGCACTAGGAACAGCAAGAGGCTTGGCATACCTCCATCATGAGTGCCTTGAGTGGGTAATCCATTGT
GATATAAAGCCAGAGAACATACTCCTGACCCGAGACTTCGAAGCAAAGATAGCAGACTTCGGACTAGCCAAACTCTCAAA
GAGAGACAGTTCCAGTTTCAATCTCACCCACATGAGAGGAACAATGGGCTACATGGCGCCAGAGTGGGCACTGAATTTGC
CGATCGACGCAAAGGTTGATGTATACAGTTATGGCGTTGTACTTCTCGAGATTGTGACTGGAAATAGGATCTCAAGTGGG
ATTACAGTGGATGGGAAAGAGGTGGAGTTTAGACAGTTTGTGCATGCAGTTAAAGAATTGCTGGAGAGTGGAGATGTCAA
GGTTATAGCCGATGCTAGACTGAATGGCCATTTCAATCCTGAGCAAGTGGCGGTAATGGTGAAATTGGCTT------GTC
TCGAAGAAAGAAACAGCAGACCTACAATGAATGAAATTGTAAAAGCTCTACTGGCATGTGATGATGAAGACAATCACCCA
GCCTACTCATGGTGACCGGCAATAAACAACAGTGTATCAATTGCAATAAGAAGAATTGGTCTAGTATATTGCTTGATATT
TGAAAGTAGAG---------------GAAAATGTTGCTAGAGAAAATGTCAGGTTGTGTGTTGCATAAATCTTTCTGTAG
ATGGAACACTAACTGCACTGTATTGAATGTTGTCTATATGAATTCTTGCATGAAACATAGTGGGCTTATTTGTATAGTTT
TTCCTCACAGAAAAAAAAGAAAAGAAAAGAAGATTTTAGTCTGCATAACTGTTTGATCTTCTAGAGCATGTAACAACTTC
CAAAGATTCCCGCTGTTTCTTCAAAAATCCGTTCTTCCATTCGAGATCCCTTCAGTGCAACCAGAGACCGCGTGACTCTT
GTTAGCAAGTAGCCAGTTAACACCTGACAACATTCACTCACTGAAATCTTGTACAAATATAAGATACTGATAAATGTGAC
CGATAACTCAAAAGGAAAATTTGCTAGTAGCTAAAATACTAGCACAAATCATTTCAGCTATCAATGTCTTGCTGAATTAG
CAGTGGAATACTGACTTGAATGGTCCATCGATCTAGTACTACGGAACCACTACATTTTGGCACTAATTTATGGTCGAACT
TTCGGCTGGTAACATAATCAGTAAAGTGAGCCAGTCATCCTTGGACTACATTATTAGTCGCAATGGTAGAAAGTACAAAT
CGAGCACCAGGGCCAAATTATTTTTTCCGGCAATATGGGAAAACTTTAGCACTTATAACTGTATCAGCTTAACTGATCTT
TCAGAACACTGCTCAAGTTCGGAATATCTACAATCGTTGGAGTAACAAAAATGATTGATTTAGCTTCCTGTTCAGAAAG
>SNPs
------------------------------S-----------------------------------------------SS
--------------------------------------------------------------------------------
----------------------------------------------------------------------------S---
---------------S------------SSSSSS----------------------------S-----------------
------------S---------------------------------------------S---------------------
------S------------------------------------------------------S------------------
---------------------------------------------------------------------------S----
---------------------S-------------------------------------------S----------SS--
----------S----------S--S----S-S----------------------------------S-------SS----
----------SS-------------S---S------------SSS-----------------S-----------------
------------------------------------SS-------------S----------------------------
--------------------------------------------------------------------------------
-------------------------------------S------------------------------------------
------S-------------------S-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------S-----------
---------------S----------------------------------------------------------------
---------------------------------------------------------------------S----------
S-------------------S-----S-----------------------------------------------------
----------------------SS-----S--------------------------------------------------
-------------------------------S-----------------------S------S-------S--------S
-------------------------------------S----------------S-----------------------S-
-------------------------S------------------------------------------------------
-----------------S------------S------------S--------S---S-----------------------
------------------------S-------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------S-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------S----------------------------------------
------------S----S--------------------------------------------------------------
----------------------------------------------------------------S---------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------S----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---S----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------S--S--------------------------------------------------------------------
-----------S--------------------------------------------------------------------
-----------S-------------------------------------------------------SS-S---------
----------------------------------------S---------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------SS------------S-----------------------S-----------------
-------------------S---------------S-------------------------------------------
>forward_998
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------ATGGAAGCAGTACCTTCGGT------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------------
>reverse_2760
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------GTGTGGGGGTTTTGCTCTGA---------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------------------------------------
>forward_1866
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------TGTGCATGGGCTATGTGGAC------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------------
>reverse_3110
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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---------------------------------------------------------------------GCTGAATTTGC
CGATCGACG-----------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------
>forward_1977
--------------------------------------------------------------------------------
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-------------------------------------CAAGCCGCAATTCAGCAAAG-----------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------------------------------------
>reverse_3612
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------GCTGCACTGTATTGAATGTTGTCT---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------
