>input_sequence_36642
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------------------------------------------------------------CCC---------CGCGACCG
AATCTCCAGCGGCGCCG---TCCCCCTTCGGCCCCAATGGTGAACCCGCCGGAGCTCTACCACCGGATCCTCGACGTCCC
CAGGGGCACCTCGTCGCAGGGGCTCCGCGCCGCGTACAAGGGCCTCGCCAGGAAATGGCACCCCGACAAGCACCCGCCGG
CCTCCAAGCCCGAGGCCGAGGCGCGCTTCAAGGCCATCACCGAGGCCTACGAGGTGAGTAG--CGCCCCGCCGCCTCCCT
CCCCGCGCGCGC------------------TCGTCGCCGCCGTGGAAACCGCATGCATTCGCGGCTCGTCCTGATTCGCT
GTCGGCGTGGGCTTGTTTTGGTTGC-GCAGGCGCTCCTGGACCAGCAGGAGAACAGGGCGGTGTTCGGGGTGTGCAACGA
CGATCGGGCGGCCGAGATGTTCGGGACGTTCGGC---------------GCGGGCGGGGGCGGGGGCGGCGCGCGCATGG
CGAGGACGCGCAGCGACGACTTCTGCATGCGGAGCGCGCCCGCCACGCCGGCCAGGGAGTTCACCAAGGTCTACAGCTCC
GGCAACACG------GGCGGGCGCCGCGCCTTCGCCGAGTTCTCCAGCTCCATCATGCGCAAGGCGCCGCCGCTGGAGCG
CGCCCTCGAGTGCACGCTGGAGGAGCTCTGCCGCGGCTGCAAGAAGCAGGTCAAGTTCACCCGCGACGTCGTCACCAAGA
ACGGGTACCGCCACTCACTCGCCGCTTCCTCC----------TCCCCCCACCCAATCCATGAGCAGGACTGATTGAAACT
TCGCCTGAATTCTTAAAGAAAACAAAATACTATCAATTC-----------------------------------------
---------------------------------ACGCGGAACAGGCCTGATGTGATCCATCACC----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------CATCTACATGGGAGATTTCGACGGATCGATGCCTGGA------
--------------------------------------------------------------------------------
---------------------------------------------AAATTTCAGGGCAGGCAAGAATTCAGACTTTCTCC
CCGACGGCGACATCCATTCCACCTTGGCACCTTGCGCCCGCG-----CCCCAATTCGCCGCACTGTTCCCAAATCCTCGG
TGCACAGTAACCCAGCACCATTGCCGCTCCCTTTCCAGCCTACGCCGCACTTGTTTTTTACAGTGGGTGAACTGCTTTAT
AGCCTGCCTG------------CATTCCTCAGGGGAATATTTAGCTTACTTTGGAACATAACAACCAAACCTTTAGGCAA
CTGCTCTCCGGTGCGCGCCTTTTTTTACCTCGCGGGGCATCTATGCTATCCTTGCAAAGATTATCCTACCTAACATGAGA
CGTAACACGACCACTAATGATGTTCTTGG-AAAGGGTTTAGTGTCAGGGCCCTGTCTCGAGGGGATAATTCTAAGGCTTC
GGTTGCTTTCCTTGCCACATATGTGTATGGAAATTTGTTGGGGCCT----------------------------------
-------------------TTGATTACCCTTCTTTTGGACCTATAATCTAACAAAGAT-------GTGGTCCTTTGACGG
TATTAATTCATAA---------TTTCGTT--------TACATGTGAGGGTATGGCCTAGGAGGGTTC-------AGAGAC
AATGACTCCTGAGCTTCCTTGCTCCTTTAGGCTCTA---TCCCCTGGGAATGTTGTTGGGCTGATCACCATCACATGATT
AATGCCTTTGACAGGTCAATAGTTAAGAAGGAGGTGACCCAGGCGATCATGGTGAAGCCGGGGTGGAGGAAGGGGCACAA
GGTCACCTTGGACGGCATGGGGGACGAGAGGCCGGGGTGCCTGCCGGCCGACGCCGTCTTCACCGTGGCCGAGAAGAAGC
ACTCGATGTTCAAGAGGGTGGGCGACGACCTGGTGCTCAAGGCCAAGGTGCCGCTGGTGAACGCGCTCACCGGCTGGTCC
TTCTCATTCAGGCTCCTGAGCGGCAAGAAGGTGAGCTGCAAGTTCGACGACGAGGTCATCTGCCCGGGGTACGAGAAGGT
GATCAAAGGCGAAGGGATGCCGATCGCCGAGC---AGAGAGGCGCGCGGGGCGACCTACGGGTGAAGCTCGAGATCGTCT
TCCCGGAGCAGCTCACCGACGAGCAGCGTGCCGGCCTCGCTGAGATCCTGAAGGACTGCACCTGAGTGAGTCTGCAATGT
TGTTGCTAGGCCCAGCTGTATGTATAAGTTTTCCCGGCCGTGCTGTTAATACCTCTCCAGAGGGTGTGAGTACATAAAGA
GATGGGTCCTTGTACATACAGTTCAGTTTTTCTCTCTCTCTATATATGATATATGATGAAACGTGAGGCAAGCATTATGT
GGATAGTATAGTAAATGTTTGGTCCATGA---------------------------------------------------
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>chr3D_1_TraesCS3D01G379400
CATACGACTATGTTGCAAAAAAACGTACGAA-GGTCTAAAGACAACAACACACCACGCCCTAGAACACCTAAGCCACGAG
AAGGCCCTAAG----------GACGCAAAGCGTCGCCTCTGCCGAGCTCGAAGAGACAAGGGTCTTCACCCGAAACTATA
ACACAGAGAGGAGAACCACAACGATGTTCACAAGAGAAGAGCGGCCACACCAAAGCGCAGCTTTCG--TTGGACATCTCA
CCCGTGCCAGCACAAGGCCTCCAGGATTACCGCGACGAACACAAACCTCGAGATCCGCTCTGG-CGTCAACGCTACCGAC
GACAGAAAAGCGAGCCCGAGCCACCCACCGCTACACCCCCTCGTCGCCAATACGACCATCCTTACCTATCCGGAGCAACA
GCCCCGACCCGCCCTCGGGCCCAGATCTGGCTGACCAGAGCACGGACCCTAGGTCAGAACCACCGCCGTCGCGTGTGTAG
TCGTCACTGTCAAGGCCCGCCCCGCCCACCACACTGTTTGCCACGGCGCCACAGGGCCTAGCG-CCTGCACCAGGGCCTG
GCATGGGGAAGCCGACCCGCGCCGCCCCCGTCGCACGGTGAGTCGGGGACAAGACAGAGCCTCGCCGCCATCCATCGGGC
TTCGCCTGGCCGTGTCCTCTGGCAGGGCGAGCGAGCAAGAGGATGGTCGGCGGCGGAGATCTAGGGTGTGCCCTCCCCAT
CGCCTCGTGGG-GCGACGCGAGAGGGGTGA--------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------------------TAAGATTTT
TCACTTTCACAAGCAGACA-GAGC-ATGGAAGGCTCCATCCATTGACAATTCAACCTCACACTATGG-CCCCACATGCAC
CACCGCTGGTAGTAACAAATGCAGTAGA-T-----------CTCTCCCTCTCTCTCGCTCCAAACGGTTTCAAATAGATC
GCCCTGCATAAAAGCCACTCATTTCTCCCACTGGCTCACTCTGCTTCCGCT---CTCCTCATCCTCTCTGCCACTAACCA
CCTCCCTCCTCCCTCC-----------------------CCTCCCCCGTT--TCGCTTTCCCC---------CGCGACCG
AATCTCCAGCGGCGCCG---TCCCCCTTCGGCCCCAATGGTGAACCCGCCGGAGCTCTACCACCGGATCCTCGACGTCCC
CAGGGGCACCTCGTCGCAGGGGCTCCGCGCCGCGTACAAGGGCCTCGCCAGGAAATGGCACCCCGACAAGCACCCGCCGG
CCTCCAAGCCCGAGGCCGAGGCGCGCTTCAAGGCCATCACCGAGGCCTACGAGGTGAGTAG--CGCCCCGCCGCCTCCCT
CCCCGCGCGCGC------------------TCGTCGCCGCCGTGGAAACCGCATGCATTCGCGGCTCGTCCTGATTCGCT
GTCGGCGTGGGCTTGTTTTGGTTGC-GCAGGCGCTCCTGGACCAGCAGGAGAACAGGGCGGTGTTCGGGGTGTGCAACGA
CGATCGGGCGGCCGAGATGTTCGGGACGTTCGGC---------------GCGGGCGGGGGCGGGGGCGGCGCGCGCATGG
CGAGGACGCGCAGCGACGACTTCTGCATGCGGAGCGCGCCCGCCACGCCGGCCAGGGAGTTCACCAAGGTCTACAGCTCC
GGCAACACG------GGCGGGCGCCGCGCCTTCGCCGAGTTCTCCAGCTCCATCATGCGCAAGGCGCCGCCGCTGGAGCG
CGCCCTCGAGTGCACGCTGGAGGAGCTCTGCCGCGGCTGCAAGAAGCAGGTCAAGTTCACCCGCGACGTCGTCACCAAGA
ACGGGTACCGCCACTCACTCGCCGCTTCCTCC----------TCCCCCCACCCAATCCATGAGCAGGACTGATTGAAACT
TCGCCTGAATTCTTAAAGAAAACAAAATACTATCAATTC-----------------------------------------
---------------------------------ACGCGGAACAGGCCTGATGTGATCCATCACC----------------
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-------------------------------------CATCTACATGGGAGATTTCGACGGATCGATGCCTGGA------
--------------------------------------------------------------------------------
---------------------------------------------AAATTTCAGGGCAGGCAAGAATTCAGACTTTCTCC
CCGACGGCGACATCCATTCCACCTTGGCACCTTGCGCCCGCG-----CCCCAATTCGCCGCACTGTTCCCAAATCCTCGG
TGCACAGTAACCCAGCACCATTGCCGCTCCCTTTCCAGCCTACGCCGCACTTGTTTTTTACAGTGGGTGAACTGCTTTAT
AGCCTGCCTG------------CATTCCTCAGGGGAATATTTAGCTTACTTTGGAACATAACAACCAAACCTTTAGGCAA
CTGCTCTCCGGTGCGCGCCTTTTTTTACCTCGCGGGGCATCTATGCTATCCTTGCAAAGATTATCCTACCTAACATGAGA
CGTAACACGACCACTAATGATGTTCTTGG-AAAGGGTTTAGTGTCAGGGCCCTGTCTCGAGGGGATAATTCTAAGGCTTC
GGTTGCTTTCCTTGCCACATATGTGTATGGAAATTTGTTGGGGCCT----------------------------------
-------------------TTGATTACCCTTCTTTTGGACCTATAATCTAACAAAGAT-------GTGGTCCTTTGACGG
TATTAATTCATAA---------TTTCGTT--------TACATGTGAGGGTATGGCCTAGGAGGGTTC-------AGAGAC
AATGACTCCTGAGCTTCCTTGCTCCTTTAGGCTCTA---TCCCCTGGGAATGTTGTTGGGCTGATCACCATCACATGATT
AATGCCTTTGACAGGTCAATAGTTAAGAAGGAGGTGACCCAGGCGATCATGGTGAAGCCGGGGTGGAGGAAGGGGCACAA
GGTCACCTTGGACGGCATGGGGGACGAGAGGCCGGGGTGCCTGCCGGCCGACGCCGTCTTCACCGTGGCCGAGAAGAAGC
ACTCGATGTTCAAGAGGGTGGGCGACGACCTGGTGCTCAAGGCCAAGGTGCCGCTGGTGAACGCGCTCACCGGCTGGTCC
TTCTCATTCAGGCTCCTGAGCGGCAAGAAGGTGAGCTGCAAGTTCGACGACGAGGTCATCTGCCCGGGGTACGAGAAGGT
GATCAAAGGCGAAGGGATGCCGATCGCCGAGC---AGAGAGGCGCGCGGGGCGACCTACGGGTGAAGCTCGAGATCGTCT
TCCCGGAGCAGCTCACCGACGAGCAGCGTGCCGGCCTCGCTGAGATCCTGAAGGACTGCACCTGAGTGAGTCTGCAATGT
TGTTGCTAGGCCCAGCTGTATGTATAAGTTTTCCCGGCCGTGCTGTTAATACCTCTCCAGAGGGTGTGAGTACATAAAGA
GATGGGTCCTTGTACATACAGTTCAGTTTTTCTCTCTCTCTATATATGATATATGATGAAACGTGAGGCAAGCATTATGT
GGATAGTATAGTAAATGTTTGGTCCATGAGCTGTATGTACACGCGAGATCTCGCCTTGTTTTCTTGGCCTCTTGATGCCT
CCAGTTCATTCATTCCATTAACTATCTGAAG------------GTGCAGTTAATTGGTGCTCGTTCCGTCAGTTACTAGC
GTGCGCTGGTGCCAGCTTCGCGATAATCCCTTGCTTGGCCGAGGAATTTACATTACAGGTTTGCTTTGTGCA---TTCCC
CAGCTTTTCCTTGTCACCAACTGACAAC---------CTGGTGGTGCTTAAATCTCAAGGAATTCAGGACAGTTTCACCA
GTTAATCATACTGCTGCAGATGCTT---GGATCGTGGATGGGCCATTTGGTAGGCGAGAAAAGCCCGGGCGATCCGGAGA
AATCGACGAAACTGGACCATGGCAATGAATCGCTCGTACTCGAGCGTGCAAATTGAATGAAATGATCTAGCTGATGGGAA
GGGAGGGGAGGGGAGGAGGAGCTGGAATTGATGGTTGGTGCAGCGCAGTTCCTCCAGCAGATGTTGGGCCCCTGATGCTC
CTGGAAAGGAAAGAGCAACCAAACCAACCCTGTTTGGGAGTTGTGGTGGTTCAGTGCCAATTGGCGTTTGGTAGCCCAGC
AGCAGCAGAACGGAGCAACTTGTGTGTGTGCTGCACTAGTGCCAGTAGGTGCTGCACAAACACCTTGGGACAACTAGGCA
ACAAGTTCTCCACCAGTCAACGTGGTGGAGATATGCTGCTGAATGCTTATCCCTAAACTAACCTTCCTTTTTTTTCTCTT
TTCTC-----AGACCATGCATACTGTAGCGAATTCGACAAGATGTGGTGCCGGCAAATGAAGAGGAGGCGTTTTATGTTC
ACGGGTCACAGGATGGTCAAGAGGCTGCTGAATATA--GATCCTAAGTTACAAACATGGAAGAATTGGTCCGATCATC--
----GCCGGCGGCGGCGCGGCGGGGACTAGCTAGTACCCCATGACCGCCGACGACATGTTGAGCAGGGGCCCGAGCGTGT
CGGGCGCGAACTTCCTGGCGAACAGGAAG
>chr3A_1
CATACAACTATGTTGCAAAAAAACGTACGAAAGGTCTGAAGACAATAGCATGTCACGCCTTAGAACACATAAGCCACGAG
AATGCCCTAAGGAGGGAGAAGGACGCAAAGCGTCGCCTTTGCCGAGCTCGAAGAGACAAGGGTCTTCACCCGAAACTCTA
ACACAAAGAGGAGAACCACAATGATGTTCACAAGGGAAGAGCGGCCACACCAAAGCGCAGAGCATTAATTGGACATCTCA
CCCGTGCCAGCACAAGGCCTCCAAAAAAACCGTGACGAGCACAAACCTCGAGATCCAGTCTGGGCGTCACCGCTACCAAA
AACAGAAAAGCGAGCCCGAGCCACCCACCGCTACACCCCATCGTCGCCAACACGACCATCCTTACCTATCCGGAGCGACA
ACTTCGACCCGCCCTCGGGACCAGATCTTGCCGGCCAGAGCACGAACCCTAGGTTAGAACCACTGCCGCCGCGCGTGTAG
GCATCATTGTCGAGCCCCGCCCCACCCACCACATTGTCTGCCATGGTGTCGCATCGCCTAGCGCCCCGCACAAGGGCCTG
GCATAGGGAAGCCGACCTGTGTCGGCCCCGTCGCACAAGGTGTCGAGGACAAGACAAAGCCTCGCCACCATCCATCGGGC
TTCGCCTGGTCGTGTCCTCTGGCAAGGCGAGCGAGCAAGAGGGTGGTCGGCGGCGGAGACCTAGGGCGTGCCCTCCCCGT
CGCCTCGTGGGAGAGACACGAGATGGATGATAAGAGCATCTTCAGCCACGTACCTCTAACTTGACCCCTCAAACGCCCGC
GGACGCGCCCGGTCAGTGACCGAGGCGTGTTTGTTTTGAGCCCCTACATTTTCGTCCGCGCAGCCACACTTGTCATATTT
TTTTCTCACATGTCCAGTCACTTGCACTTGATTGGTGGAGAAGAAGAGAGAGAAAGAAAAGAATGAATATAAAAAGAGAA
AAGGTGGTCATATGTCCGATCGTGTCATACGTCGTGGACTGACCGGGCGTGCCCGGGCACGTCCGCGAGCCCTCATAACG
TGTCCGGGTGGATATGAGAGGTGCCGGTCAGTCCAGACGTTTGAAACGGATACGAGGGGTTTGGTTGGGTCGCATTTTTA
TGACCGGTCACCGAACGGACGGCCTGCCCGAACGTTTGAGATGGATATGAGGGGTCCAGTGGTAGATGCTCTAAGAATTT
TCACTTTCACAAGCAAACGTGAGC-ATAGAAGGCTCCATCAATTGACAATTGAACCTCACATCATGGTCCCCACATGCAC
CACCACTAGCAGTAACAAATGCTACTACAATATCTCCCCCCCTCTGTCGCTCGCTCGCTCCAACGGGCTTCAAATAGATG
GCCCTGCATAAAAGCCACTCATTTCTCCCACTGGCTCACTCTGCTTCCGCTCTCCTCCTCATCCTCTCTGCCACTAACCA
CCTCCCTCTGCATCAAACCCACCACTCCCTCCTCCCTCCCCTCCCCCGTTTCTCGCTCGCTTTCCCCCGGGACGCGACCG
AATCTCCAGCGGCGCCGCCCCCCCCCTCCGGCCCCAATGGTGAACCCGCCGGAGCTCTACCACCGGATCCTCGACGTCCC
CAGGGGCACCTCCTCGCAGGGGCTCCGCGCCGCCTACAAGGGCCTCGCCAGGAAATGGCACCCCGACAAGCACCCGCCGG
CCTCCAAGCCCGAGGCCGAGGCGCGCTTCAAGGCCATCACCGAGGCCTACGAGGTGAGTCCACCGCCCCGCCGCCTCTTC
CC-------CGC------------------GCGTCGCCGCCGTGGAAACCGCATGCATTCGCGGCTCGTCCTGATTCGCT
GTCGGCGCGGGCTTGTTTTGGTTGCCGCAGGCGCTCCTGGACCAGCAGGAGAACCGGGCGGTCTTCGGGGCGTGCAACGA
CGACCGGGCGGCCGAGATGTTCGGGACGTTCGGC---------------GC---------------CGGCGCGCGCATGG
CGAGGTCGCGCAGCGACGACTTCTGCATGCGGAGCGCGCCCGCCACGCCCGCCAGGGAGTTCACCAAGGTCTACAGCTCC
GGCAACACG------GGCGGCCGCCGCGCCTTCGCCGAGTTCTCCAGCTCCATCATGCGCAAGGCGCCGCCGCTGGAGCG
CGCCCTCGAGTGCACGCTCGAGGAGCTCTGCCGCGGCTGCAAGAAGCAGGTCAAGTTCACCCGCGACGTCGTCACCAAGA
ACGGGTACTGCCACTCACTCACCGCTTCCTCCTTCCTCCTCATCCCCCCACCTAATCCATGAGCAGGACCGATTGAAACT
TCACCTGAATTCCTCAAGAAAACAAAG---TATCAATTC-----------------------------------------
---------------------------------ACGCGCAACAGGCCTGATGTGATCCATCATC----------------
--------------------------------------------------------------------------------
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-------------------------------------CATCTACATGGGAGATTTCGACGGATCGATGCCTGGA------
--------------------------------------------------------------------------------
---------------------------------------------AAATTTCAGGTCAGGCAAGAATTCAGACTTTCTCC
CCGACGGCGACATCCATTCCACCTTGGCACCTTGCGCCTGCCCGCGCCCCCAATTTGCCGCACTGTTTCCAAATCCTCGA
TGCACAGTAGCCCAGCACCATTGCCGCTTCCTTTCCAGCCTACGCCGCACTTGTTTTTTACAGTGGGTGAACCGCTTTAT
AGCCCGCCTGCCCGCCTGCCTGCATTCGTCAGGGGAATATCTAGCTTACTTTGGAACATAACAACCAAACCTTTAGGCAA
CTGCTCTCCGGTGCGCGCCTTTTTTCACCTCGCGGG-CATCTATGCCATCCTTGCAAAGATTATCCCACCTAACATGAGA
CGTAACACGACCGCTAATGATGTTCTTGGAAAAGGGTTTAGTGTCAGGGCCCTGTCTCGAGGGGATAATTCTAAGGCTTC
GGTTGCTTTCCTTGCCACATATGTGTATGCAAGTTTGTTGGGGGCT----------------------------------
-------------------TTGATTGCCCTTCTTTTGGACCTATAATCTAACAAAGAT-------GTGGTCCTTTGACGG
TATTAATTCATAAAAACCAAAATTTCGTG--------TACATGTGAGGGCATGGCCTAGGAGGGTTC-------AGAGAC
AATGACTCCTCAGCTTCCTTGCTCCTTTAGACTCTACTATCCCCTGGGAATGTTGTTGGGCTGATCACCATCACATGATT
AATGCCTTTGACAGGTCAATAGTTAAGAAGGAGGTGACCCAGGCGATCATGGTGAAGCCGGGGTGGAGGAAGGGGCACAA
GGTCACCCTGGACGGCATGGGGGACGAGAGGCCGGGGTGCCTGCCGGCCGACGCCGTCTTCACCGTGGCCGAGAAGAAGC
ACTCGACGTTCAAGCGGGTGGGCGATGACCTGGTGCTCAAGGCCAAGGTGCCGCTGGTGAGCGCGCTCACCGGCTGGTCC
TTCTCATTCAGGCTCCTGAGCGGCAAGAAGGTGAGCTGCTCGTTCGACGACGAGGTCATCTGCCCCGGGTACGAGAAGGT
GATCAAAGGCGAAGGGATGCCGATCGCCGAGC---AGAGAGGCGCGCGGGGCGACCTACGGGTGAAGCTCGAGATCGTCT
TCCCGGAGCAGCTCACCGACGAGCAGCGCGCCGGCCTCGCTCAGATCCTCAAGGACTGCACCTGAGTGAGTCTGCAATGT
TGTTGTTAGGCCCAGCTGTATGTATGAGTTTTCCCGGCCGTGCTGTTAATACCTCTCCAGAGGGTGTGAGTACATAAAGA
GATGGGTCCTTGTACATACAGTTCAGTTTTTCTCTCTATAAATAT----------ATAAAACGTGAGGCAAGCATTATGT
GGCTAGTATAGTACATGTTTGGTCCATGAGCTGTATGTGCACGCGAGATCTCGCCTTGTTTTCTTGGCCTATTGATGCAT
CCAGTTCATTCATTGCATTAACTATCGAGTTAACTATCTCAGAGTGCAGTTAATTGGTGCTCGTTCCGTCAGTTACTAGC
GTGCGCTGGTGCCAGCCTCGCGCTAATCCCTTGCTTGGCCGAGGAATTTACATTGCAGGTTTGCTTTGTGCATTCTTCCC
CAGCTTTTCCTTGTCACCAACTGACACCCTGTTGATGCTGGTGGTGCTTAAATCTCAAGGAATTCAGGACAGTTTCACCA
GTTAATCATACTGCTGCTGCAGGTGCAAGGATCGTGGATGGGCCATTTGGTAGGCGAGAAAAGCCCGCGCGATCCGGAGA
ATTCGACGAAACTGGACCATGGCAATGAATCGCTCGTACTCGAGCGCGAAAATTGAATGAAATGATCTAGTTGAGCT---
-------GAGGGGAGGAGGAGCTGGAATTGATGGTTGGTGCAGTGCAGTTCCTCCAGCAGATGTTGGGCCCCTGATGCTC
CTGGAAAGGAAAGAGCAACCAAACCAACCCTGTTTGGGAGTTGCGGTGGTTCAGTGCCAATTGGCGTTTGGTAGCCCAGC
AGCAACAGAAGAGAGCAACTTGTGTGTGTGCTGCACTAGTGCCAGTAGGTGCTGCACAAACACCTTGGGACAACTTGGCA
ACAAGTTCTC-------------------GATATGCTGCTGAATGCTTATGCCTAAACTAACCTTCCTT-TTTTTCTCCT
TTCTC-----AGACCATGCATACTGTAGCGAATTCGACAAGATGTGGTGCCGGCAAAGGAAGAGAAGGCATTTTATGTTC
ACGTGTCACAGGGTGGTCAAGAGGCTGCTGAATATA--GATCCTAAGTTACAAACATGGAAGAATCGGTCGGATCATC--
----GCCGGCGGCGGCGCGGCGGGGATTAGCTAGTACCCCATGACCGCCGACGACATGTTGAGCAGGGGCCCGAGCGTGT
CGGGCGCGAACTTCCTGGCGAACAGGAAG
>chr3B_708
CCTCGGGGGCGACATAGGGGGTGATATTTC--------------------------------------------------
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----------------------------------------------------------------------------TTTT
TCACTTTCACAAGGAGACGTGAGCAATGGAAGGCTCCATCCATTGACAATTCAACCTAACAATACGG-CCCCACATGCAC
TACCACTAGTAGTAACAAATCCCTCGCTCT-----------CTCTCTCGCTCGGTCGCTCCAACGGGTTTCAAATAGATC
GCCCTGCATAAAAGCCACTCATTTCCCCCACTGGCTCACTCTGCTTCCGCTCTCCTCCTCGTCCTCTCTGCCACTAACCA
CCTCCCTCTGCATCAAACCCACCACTCCCTCCTCCCTCCC-----CCGTTTCTCGCTTTCCCC---------CGCGACCG
AATCTCCAGCGGCGTCG---CCCCCCTCCGGCCCCAATGGTGAACCCGCCGGAGCTCTACCACCGGATCCTCGACGTCCC
CAGGGGCACCTCGTCGCAGGGGCTCCGCGCCGCCTACAAGGGCCTCGCCAGGAAATGGCACCCCGACAAGCACCCGCCGG
CCTCCAAGCCCGAGGCCGAGGCGCGCTTCAAGGCCATCACCGAGGCCTACGAGGTCAGTGT----CCCCCCCGCCTCTTC
CC-------CGGGCGCCTCCCTCCGTGCGTGCGTCGCCGCCGTGGAAACCGCATGCATTCGCAGCTCGTCCTGATTCGCT
GTCGGCGTGGGCTTGTTTTGGTTG-CGCAGGCGCTCCTGGACCAGCAGGAGAACAGGGCGGTGTTCGGGGTGTGCAACGA
CGACCGGGCGGCCGAGATGTTCGGGACGTTCGGC---------------GCCGGCGCCGGCGGGGGCGGCGCGCGCATGG
CGAGGTCGCGCAGCGACGACTTCTGCATGCGGAGCGCGCCCGCCACACCGGCCAGGGAGTTCACCAAGGTCTACAGCTCC
GGCAACACG------GGCGGCCGCCGCGCCTTCGCCGAGTTCTCCAGCTCCATCATGCGCAAGGCGCCGCCGCTGGAGCG
CGCCCTCGAGTGCACGCTGGAGGAGCTCTGCCGCGGCTGCAAGAAGCAGGTCAAGTTCACCCGCGACGTCGTCACCAAGA
ACGGGTACTGCCACTCGCTCACCGCTTCCTCCCCCTC------CCCCTCACCAAATCCATGAGCAGGACTGATTGAAACT
TCACCTGAATTCTTCAAGAAAACAAAA---TATCAAATC-----------------------------------------
---------------------------------ACGCGGTACAGGCTCGATGTGATTCATCATC----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------CATGTAAATAGGAGATTTCGACGGATCGATGCCTGGA------
--------------------------------------------------------------------------------
---------------------------------------------AAATTTCAGGGTAGGCAAGAATTCAGACTCTGCTC
CTGACGGCGACATCCATTCCACCTTGGCACCTTGCGCCCACG-----CCCCAATTCGCCGCACTGTTTCCAAATCCTCGA
TGCACAGTAGCCCAGCACCATTGCCGCTCCCTTTCCAGCCTACGCCGCACTTGTTTTTTACAGTGGGTGAACTGCTTTAT
AGCCTGCCTGCCTACCTTCCTGCATTCGTCAGGGGAATATTTAGCTTACTTTGGAACATAACAACCAAGCCTTTAGGCAA
CTGCTCTCCGGTGCGCGCCTTTTTTCACCTCGCGGG-CATCTATGCTATCCTTGCAAAGATTATCCTACCTAACATGAGA
-GTAATACGACCACTAATGATGTTCTTGG-AAAGGGTTTAGTGTCAGGGCCCTGTCTCGAGGGGATAATTCTAAGGCTTC
AGTTGCTTTCCTTGCCACATATGTGTATGCAAGTTTGTTGGGGGCT----------------------------------
-------------------TTGATTACCCTTCTTTTGGACCTATAATCTAACAAAGAT-------GTGGTCCTTTGACGG
TATTAATTCAT---------AATTTCGTG--------TGCATGTGAGGGCATGGCCTAGGAGGGTTC-------AGAGAC
AATGACTCCTGAGCTTCCTTGCTCCTTTAGACTCT---ATCCCCTGGGAATGTTGTTGGGCTAATCACCATCACATGATT
AATGCCTTTGACAGGTCAATAGTTAAGAAGGAGGTGACCCAGGCGATCATGGTGAAGCCGGGGTGGAGGAAAGGGCACAA
GGTCACCTTGGACGGCATGGGGGATGAGAGGCCAGGGTGCCTACCGGCGGACGCCGTCTTCACCGTGGCCGAGAAGAAGC
ACTCGACGTTCAAGAGGGTGGGCGACGACCTGGTGCTGAAGGCCAAGGTGCCGCTGGTGAACGCGCTCACCGGCTGGTCA
TTCTCATTCAGGCTCCTGAGCGGCAAGAAGGTGAGCTGCTCGTTCGACGACGAGGTCGTCTGCCCTGGGTACGAGAAGGT
GATCAAAGGCGAAGGGATGCCGATCGCCGAGC---AGAGAGGCGCGCGGGGCGATCTACGGGTGAAGCTCGAGATCGTCT
TCCCGGAGCAGCTCACCGACGAGCAGCGCGCCGGCCTCGCTGAAATCCTCAAGGACTGCACCTGAGTGAGCTTGCAATGT
TGTTGTTAGGTCCAGCTGTATGTATAAGTTTTCCCGGCCGTGCTGTTAATACCTCTCCAGAGGGTGTTAGTACATAAAGA
GATGGGTCCTTGTACATACAGTTCAGTTTTTCTCTCTATATATATG----ATATGATGAAACGTGAGCCAAGCATTATGT
GGATAGTATAGTAAATGTTTGGTCCATGAGCTGTATGTACACGCGAGATCTCGCCTTGTTTTCTTGGCCTCTTGATGCCT
CCAGCTCATTCATTCCA------------TTAACAACCTCAGAGTGCAGTTAATTGGTGCTCATTCCGTCAGTTACTAGC
GTGCGCTGGTGCCAGCTTCGC-CTAATCCCTTGCTTGGCCGAGGAATTTACA-----GGTTTGCTTTGTGCA---TTCCC
CAGCTTTTCCTTGTCACCTACTGACACGCTGTTGATGCTGGTGGTGCTTAAATCTCAAGGAATTCAGGACAGTTTCACCA
GTTAATCATACTGCTGCAGATGCTT---GGATCGTGGATGGGCCATTTGGTAGGCGAGAAAAGCCCGGGCGATCCGGAGA
ATTCGACAGAACTGGACCATGGCAATGAATCGCTCGTACTCGAGCGCGCAAATTGAATGAAATGATCTAGCTGAGGT---
--GAGGGGAGGGGAGGAGGAGCTGGAATTGATGGTTGGTGCAGCGCAGTTCCTCCAGCAGATGTTGGGCCCCTGATGCTC
CTGGAAAGGAAAGAGCAACCAAACCAACCCTGTTTGGGAGCTGCGGTGGTTCAGTGCCAATTGGCGTTTGGTAGCCCAGC
AGCAACAGAAGAGAGCAACT--TGTGTGTGCTGCACTAGTGCCAGTAGGTGCTGCACAAACACCTTGGGACAACTAGGCA
ACAAGTTCTCCACCAGTCAACGTGGTGGAGACATGCTGCTGAATGATTATGCCTAAACTAACCTTCCTTCTTTTTTTCCC
CTCTTTTCGAAGGCCATACATACTGTAGCGAATTCGACAAGATGTGGTGCCGGCAAATGAAGAGAAGGCGTTTTATGTTC
ACGGGTCACAATGTGGTCAAGAGGCTGCTGAATATATAGATCCTAAGTTACAAACATGGAAGAATCGGTCCGATCATCGC
CGCCGCCGGCGGCAGCGGGGG-----CTAGCTAGTACCCCATGACCGCCGACGACATGTTGAGCAGGGGCCCGAGCGTGT
CGGGCGCGAACTTCCTGGCGAACAGGAAG
>chr6A_977
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------------------------------CCTCCCTCCC-----CCGTTTCTCGCTTTCCCC---------CGTGACCG
AATCTCCAGCGGCGCCG---CCCCCCTCCGGCCCCAATGGTGAACCCGCCGGAGCTCTACCACCGGATCCTCGACGTCCC
CAGGGGCACCTCCTCGCAGGGGCTCCGCGCCGCCTACAAGGGCCTCGCCAGGAAATGGCACCCCGACAAGCACCCGCCGA
CCTCCAAGCCCGAGGCCGAGGCGTGCTTCAAGGCCATCACCGAGGCCTACAAGGTGAGTCTACCGCCCCGCCGCCTCTTC
CC-------CGC------------------GAGTCACCACCGTGGAAACCGCATGCATTCGCGGCTCGTCCTGATTCGCT
ATCGGCGCGGGCTTGTTTTGGTTGCCGCAGGCGCTCCTGGACCAGCAGGAGAACCGGGCGGTCTTCGGGGCGTGCAACGA
CGACCGGGCGGCCAAGATGTTCGGGACCTTCGGCGCCGGTTGCGGCAGGGC---------------CGGCGCGCGCATGG
CGAGGTCGCGCAGCGACGACTTCTGCATGCGGAGTGCGCCCGCCACGCCGGCCAGGGAGTTCACCAAGGTCTACAGCTCC
GGCAACACG------GGCGGCCGCCGCGCCTTCGCCGAGTTCTCCAGCTCCATCATGCGCAAGGCGCCGCCGCTGGAGCG
CGCCCTCGAGTGCATGCTCGAGGAGCTCTGTCGCGGCTGCAAGAAGCAGGTCGAGTTCACCCGCGATGTCGTCACCAAGA
ACGAGTACTGCCACTCACTCGCCGCTTCCTTCTTCCTCC----------------------------ACCGATTGAAACC
TCGCCTGAATTCCTCAAGAAAACGAAA---TATCAATTC-----------------------------------------
---------------------------------ACGCGGAACAGGCCTGATGTGATCCATCACC----------------
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-------------------------------------CATCTACATGGGAGATTTCGACGGATCGATGCCTGGA------
--------------------------------------------------------------------------------
---------------------------------------------AAATT------------------------------
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>chr1D_1489
CGCACGCCC-----------------------------------------------------------------------
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-----------------------------------------------CCGGCGAGGGAGTCCCAGAAGGTGTACAGCTCC
ACGGACATCGGCGGCGGCGGGCGGCGCGCGTTCGCCGAGTTCTCCAGCTACGTGGTGCGCAAGGCGCCGCCGCTGGAGCG
CAAGGTGGAGTGCACCCTGGAGGAGCTCTGCGCCGGGTGCAAGAAGGAGGTCAAGTACACCCGCGACGTCGTCACCAAGA
ACGGGTAAGCCATCACGCCACGA---------------------------------------------------------
TGACGTGGAACCGTACACAAAACAAAA---CATCCATATCTCCAGATCTGTCACTCACCTGAGACAACATCATTGCCGTT
TATTCAGAGTCCCTTATACTACCACTGTATATGACGTGGAACAGTAACAGTATCACACCACAGTATGCATGCTATCCAAG
TATTTTCGATAAAAAATACTTCCTCCGTCTCATAATATAAAAACGTTTTTAATGCTAGACTAGTTTCAAAAACGTTTTTA
TATTATATGACGGAGGGAGTAGGTTTTATTCACTCAAAATGAAGCATTAAATAGGATACAAACACAATAAACACACGAAA
ACTCTGCATAGCTAAGATTAATTTACGACTCTCTTTTCATCTACAAATTCAGTTTATATTTGTGGTTAGACATCCATCGT
AACATAAAAAAGAAAGATCGAGTGTGTCAGACTATAGATTCAGATGAATGTGCGTGTGCCTACTTGATGATGAGCAAGAA
TAATCTTGGTACGGTTTAACATGCGGTCTAGACAATGCTTGCTTGAAAGTTCAGGCTAGACAAACAGAGCTGTTAAGTAC
TGTGACACCAAATCAGCTTTAGTTTCAATTATGTGGTGTACCTTCTAAGAAATAGGTGTTCAAATAGCGATCTGCTCAAC
CCCCATCAAGGGACACACTTAAACACAGGACACTGGTAGTCTGGTACAGTTTCAGGCCATTGGCCAGTTTCTCCAGCCGG
CCACAGACTG------------CATTTATCACTAAAATACATATGCTAGAGATGAAATGTTCAGTCCCCCTATGGTTGTC
TGCAAGATGATTATCCTCTTTTTTTTTTGATCAAGCAAG-----------------ATGATTATCCTCACTAACCACTAA
GAACTAACTACAATATTATGCCACAATTCAGTACAA------------------------------AATTCTTAGGCAGG
TACTCCCTCTGTAAAGAAATATAAGAGCGTTTAGATCACTAATTACTTAAGAGGTAGTACTAGCATACTTGTAATGTGCC
ACTAAGAACTCATGTTTGGTTGAATACCTCTATTTTGGAGGCTATCACCTGTCGAAATGCGTGGGGTGGTCCTTCGGGGG
CAGGGCATTAGGTGGTGTGTAATTCGTGTATGGTGCCTGCATGTGAGGGTGCTGGCCTAGCTAGCTGGTACCGGAGAGAC
AGTGACTCTATTCGTACCACCTGATCGCATTTTTTACGCTACTGACCAGTGACCATCGGCTGCATGATTTGGTCCCTGAC
--------TGACAGGCTGATCGCCAAGAAGGAGGTGACGCAGATCATCCGGGTGAAGCCCGGGTGGAAGAAGGGGACCAA
GGTGACGTTCGAGGGCCTGGGCAACGAGCGCCCCGGCTGCCTCCCCGGCGACGCCGTCTTCACCGTGTCGGCCAGGAGGC
ACAAGGCGTTCAAGCGGCAGGGCGACGACCTGGTGCTCAAGGCGGAGGTGCCGCTGGTGAACGCGCTCACCGGCTGGTCA
TTCTCGTTCCGCCTGCTCGGCGGCGAGAAGGTCAGCTGGTCGTTCCGCGACGAGGTCATCCGCCCCGGGTACGAGAAGGT
GGTGAGGGGGGAGGGCATGCCCGTCGTCGGCGGCAAGAAGGGCGCGCGCGGGGACCTGCGGGTCAAGTTCGACGTGGTGT
TCCCCAAGAACCTCACCGGCGAGCAGCGAAGGGGCCTCGTCGAGATCCTGAGGGGCTGCGCCTGA---------------
--------------------------------------------------------------------------------
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-----------------------------
>SNPs
-------------------------------------S-------S-S--SSS------S--------S-----------
--S-----------------------------------S--------------------------------------S--
-----S---------------S------------S-------------------------SSSSSS--------------
-----------------------SS-SS----S-----S-----------------SS-----------S-------S-S
S--------------------------------------S----------S-------------------------S---
S-SS---------------S--------S--S-S----------S---------S--------S----S----S------
S-S---S----S--S--------S---------S---S-----S--S-S-S--SS-----------S----S--------
----S------------S-S-S--S-----------SSS-S----S----------S---------S-------------
---------S--------------S-----------------S----------------S------S-----------S-
-------------S---S-----S--S-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------S------------------------------------------S------------------
----S--S--------------SSSSSS------------------S-S---S----------SS---------------
--------------------------------------------------------------------------------
--------SS-SSSSS----------------------------------------------------------------
--------------------S------S----------------------------------------------------
---------------------------------S----------------------------------------------
-----------------------------------------------------------SS----------------SSS
--SSSSSSS---------------------S-------------------------------------------------
--------------------------------------------------------------------------------
---S-----------------------------------------------S----SS----------------------
-----S--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------S-------------------------------------------S---------------------------
---------------------------SSS--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------S
---------S----------------------------------------------------------------------
---------------------------S----------------------------------------------------
------------------------------------S-------------------------------------------
--------------------------------------------------------------------------------
-----------------------------S-------------S------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------S-------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------S-------------------------------------------------------------------------
---------------------------------------SS------------------------S--------------
--------------------------------------------------------------------------------
----------------------------S---------------------------------------------------
-----S--------------------------------------------------------------------------
-------------------------------------S-S-----SSSSS------------------------------
--------------------------------------------------------------------------------
--------------------------SSSSS-------------------------------------------------
----------------------S-------------------------------S-------------------------
--------------------------S-----------------------------------------------------
--------------------------------------------------------------------------------
-S--------------------------------------------S---------------------------S-SSSS
SS------------------------------------------------------------------------------
-------------------------------------------S------------------------------------
----S-----SS--------------------------------------------------------------------
--------------------------------------------------S------------------S--------S-
----------------------------------------------------------------S---------------
------------S----------------------------------------------------S--------------
--------------------------------------------------------------------------------
-----------------------------
>forward_617
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-------------------------------------GTGAGTCGGGGACAAGACAG-----------------------
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>reverse_3551
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------------------------------GCTCTATCCCCTGGGAATGT------------------------------
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>forward_1344
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--------------------------------------------TCCCTCTCTCTCGCTCCAAA----------------
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>reverse_3881
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----------------------------------------AGTTCGACGACGAGGTCATC--------------------
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-----------------------------
>forward_1452
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------------------------------------------------------------------------ACTAACCA
CCTCCCTCCTCC--------------------------------------------------------------------
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>reverse_3906
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-----------------------------------------------------------------GGGGTACGAGAAGGT
GATCA---------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------
>forward_1740
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----------------------------------------CGAGGCCTACGAGGTGAGTA--------------------
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>reverse_4210
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-------------------------------------------------TATATGATGAAACGTGAGGCAAGC-------
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-----------------------------
>forward_3881
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---------------------GGCAAGAAGGTGAGCTGCAA---------------------------------------
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>reverse_4891
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----------CGGAGCAACTTGTGTGTGTG--------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------
