>input_sequence_36583
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------GCTCTTCTCCCAGTCATTCATATCCGCCATCCTTCTCAATTCTTATCGAAATTCGGTAAATTCCCAAACACCCC
GCTCCTTCTCC-CGGATATCATTTTACATCTTCCGTTTGGTGTGAACAAAAAGAGGGGGTTACTTTTTTTTTC-------
-----------------------------------CTCTCCATTAGTTGTTCATTTGGAAGGAAATTCATG---------
---GGTGGTGGG------ATCGTAGGACAATGGCGGAAGGCAAGAAGGATTCTCCGAAGCTGAACCAGCGGATGGTATCA
TCTCTCTCGAAGCGAACTGCCGCGGCACATTCTTGGCATGATCTGGAGATAGGTAAATGCACATCC---------TAGTG
TCTTGCCTCCCATCAAAATTCTTTGCCCCGATCGGGATTC--AAAGTGTATTTCTGAAGGTTCATATATAATCTCATGTA
TAATTTCTCCAAATTCTAGGACCTGAAGCCCCTCTGATCTTCAACGCCGTAAGCATCTT----GACATACTCTATTGCCT
TGGCACGCTGTGTA----AATTACAGCAAATAGCTCAGATATGCATCATAGTCTTGCATGAATTTAGGTTGTTGAGATCA
CAAAGGGGAGCAAAGTCAAGTATGAACTTGACAAGAAGACTGGGATGATAAAGGTACGCGCATACATTCCTCACTTTCAG
CTTGGTGGTGTATGACAAGAAAGCTAAAAAACAAAACTTCTTCACAGTGGAGA----ACATGAAAATTAAGCTATTTCTG
TAGGTTGACAGGATTCTGTACTCGTCCGTAGTCTATCCACATAACTACGGTTTCGTACCACGGACGCTGTGTGAAGATGG
AGATCCAATTGACGTCTTGGTCCTGATGCAGGTGAGTTTTGCATTACTGATTTCAAGTTTATGCAACTCACAAGGT----
--------GATGCACATTGTGTCCGAGAATCGAGAATGTCTTATGTGTTCTGACTAACCTACACCTTCACAGGAACCAGT
CATACCTGGTTGCTTTCTTCGAGCTAAGGCTATTGGGCTGATGCCCATGATTGATCAGGCAAGACAG-TTTTTTTAAGAG
TTTCATTTATGAATAGAGTATATCAATCTCACATTATGTCT----GCTTGATACCGTGATTACTTTTTGGAACAAAAAGG
GTGAGAAAGATGATAAGCTCATTGCTGTTTGCGTTGATGATCCCGAGTACCGTCATCTCAACGACCTTAAGGAGCTCTCT
CCCCACCGCCTTGCTGAAATCCGTCGCTTCTTCGAAGATTGTACATTCTGTTTCCTCACATATTATCGGA-TTTACGCCA
ACCATAGCGACATAAATGGTTTCCTTAAATGCTT-AGTTTATTTGATGTTATGCTTCTGCAGACAAGAAGAATGAGAACA
AGGAGGTTGCTGTCAACGACTTCTTGCCACCGGAGACTGCACAGGCTGCCATTAAGCACTCGATGTGAGTTGTTTCTGAA
ATAGCTTTACAGGGTTATCTATCAGCAATTAGTAATGCAAACGCATTTCAGAGGCATGCCTCC---ACATTATAATGAGA
CGGAAACTGACACCATCTACAGTTTAAACGTGTTTATGTTCCCCGCAAAAAAATAAATAAACGTGTTTATGTTAGTATAT
ATAAGGATGTCTACAGAAGCTAATTTAACATACATTACCTGATTGAAGACAAATTTGTAGTTAAAGCATACTCCCTTTGT
TCCAATTATTTGATGCTCTAGCTTTGCACAAAGTCAAACTTCTAAACATTTAACGAAGTGTATAAGAAAATATGCTAATA
TCTACAACATCAAATATATAT------------AGTACAATATAAAAATATATTTTATGATGAATCTAATGAATGCAAAT
TGGTATAGTATATGTTGATATTATAGACTTCGTCAAGCTTA---TTTTTTTTGACTTAGAACAAAGTTGCAACTTTAAAA
TAACTTCGAACAGAGAGAGTACAATATATTATTATTAACCATTGTGCCGCTGTTTCAGGGACCTATACGCAGAATATATC
CTGCAGAGTCTGAGGAACTAATCATAGTTGCAAACTCGCAAGGCTGCAGAAACCACCAACATGGTCTCGTAAAAGGACAA
TAATCGACTGCGTGGATTTTATTTAAAGACCCATTTTTTCTATATATTTAAATAATGGGACAATGCTATTCCCATACATA
TTTTTCTGCAGAACATTGTAATCAAGGACTAATGTTATACTTGTGTATAGTGTTTCATAATATTTGAATC----------
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>chr1A_1_TraesCS1A01G342700
ACTAATTTGACGTCGGCGGCAGCGGCTCACGACTTGACATTGAGGTAGTACTCGGTCACCGACGGGTAAAGAATGTTGGC
GAGCTCATACTCCTCCTACGCCGCCTCAAGCCGGGCGGCGTCGCCATCTTTACCATCCGCCACCGCGTCCTTCGCCGCAT
CAAGATCGATCTTCGTCACACGGAGCCTCTTGGTGTTTGGCAAAAGTTGGTCGTCGAGCTCGAGGAAGCGAGCCCACGCG
CCCTAGCCATGCTGTGGGAGAGTGCGCCGCATTCACGTGCATGCATCGAGCGCCACGGTCCGATGGCGGCCCGACTGAAG
CTGCAGGTCTCCGCGTCGTGCTGTGTGCGCTTGCGTGGCGGCGATCCCCTGCCTTCGCCTCGGCCACACGCCTATGTGCC
CCTCCCGCCATGGATCCGAACAAAATGGACGACGCGCCGTGGAATCTCTCACCGAAGTTTGGAAAGGGAGGCGGCGGAGG
AGAAAGGAGACGACAGATGAAATGAAGGATGCGAACTCTAAATCACTTCGCAGCCGGTAGATATAGCTGCTCGGGGTCGG
TTTTGCGGGTCACTCGTATATTTTTATGAGCCAGGCCAAATATAAAAAATTTGCTCGGGCCCCAAACATGCAAATACGTT
AAATCCGCCGAAAATATCCGGACTGGGCCCACCG-----------------------------------------CCCAC
CGCCCAACACCGCCGGACAAAAATGCTTGTTGGCCAGGAGCCAAATAACAAACCAAGTCGCTATGTGCACCCACTCATGT
ACCCAGCCAGATGGCAGACGAATTAACGGTCAGCTTCTCATTGGCCAGATTTAGCCTGTAAAAAA-AACTCTAAAAAACA
ACAAAAATGAATCCTAGCTATATATAGTATATGTAGTATTACGTTCTAATTCGGGAGCGCATGCAGAAGGTGTCCGAGCC
GCCGCTTCTCCCGCCACTTCTCCAGGATCTCCCAACCCACCTAGAGCTCTATAT----AAGCAACGACCGTTCCTGCGCT
TCACGTGCTCTTCTCCCAGTCATTCATATCCGCCATCCTTCTCAATTCTTATCGAAATTCGGTAAATTCCCAAACACCCC
GCTCCTTCTCC-CGGATATCATTTTACATCTTCCGTTTGGTGTGAACAAAAAGAGGGGGTTACTTTTTTTTTC-------
-----------------------------------CTCTCCATTAGTTGTTCATTTGGAAGGAAATTCATG---------
---GGTGGTGGG------ATCGTAGGACAATGGCGGAAGGCAAGAAGGATTCTCCGAAGCTGAACCAGCGGATGGTATCA
TCTCTCTCGAAGCGAACTGCCGCGGCACATTCTTGGCATGATCTGGAGATAGGTAAATGCACATCC---------TAGTG
TCTTGCCTCCCATCAAAATTCTTTGCCCCGATCGGGATTC--AAAGTGTATTTCTGAAGGTTCATATATAATCTCATGTA
TAATTTCTCCAAATTCTAGGACCTGAAGCCCCTCTGATCTTCAACGCCGTAAGCATCTT----GACATACTCTATTGCCT
TGGCACGCTGTGTA----AATTACAGCAAATAGCTCAGATATGCATCATAGTCTTGCATGAATTTAGGTTGTTGAGATCA
CAAAGGGGAGCAAAGTCAAGTATGAACTTGACAAGAAGACTGGGATGATAAAGGTACGCGCATACATTCCTCACTTTCAG
CTTGGTGGTGTATGACAAGAAAGCTAAAAAACAAAACTTCTTCACAGTGGAGA----ACATGAAAATTAAGCTATTTCTG
TAGGTTGACAGGATTCTGTACTCGTCCGTAGTCTATCCACATAACTACGGTTTCGTACCACGGACGCTGTGTGAAGATGG
AGATCCAATTGACGTCTTGGTCCTGATGCAGGTGAGTTTTGCATTACTGATTTCAAGTTTATGCAACTCACAAGGT----
--------GATGCACATTGTGTCCGAGAATCGAGAATGTCTTATGTGTTCTGACTAACCTACACCTTCACAGGAACCAGT
CATACCTGGTTGCTTTCTTCGAGCTAAGGCTATTGGGCTGATGCCCATGATTGATCAGGCAAGACAG-TTTTTTTAAGAG
TTTCATTTATGAATAGAGTATATCAATCTCACATTATGTCT----GCTTGATACCGTGATTACTTTTTGGAACAAAAAGG
GTGAGAAAGATGATAAGCTCATTGCTGTTTGCGTTGATGATCCCGAGTACCGTCATCTCAACGACCTTAAGGAGCTCTCT
CCCCACCGCCTTGCTGAAATCCGTCGCTTCTTCGAAGATTGTACATTCTGTTTCCTCACATATTATCGGA-TTTACGCCA
ACCATAGCGACATAAATGGTTTCCTTAAATGCTT-AGTTTATTTGATGTTATGCTTCTGCAGACAAGAAGAATGAGAACA
AGGAGGTTGCTGTCAACGACTTCTTGCCACCGGAGACTGCACAGGCTGCCATTAAGCACTCGATGTGAGTTGTTTCTGAA
ATAGCTTTACAGGGTTATCTATCAGCAATTAGTAATGCAAACGCATTTCAGAGGCATGCCTCC---ACATTATAATGAGA
CGGAAACTGACACCATCTACAGTTTAAACGTGTTTATGTTCCCCGCAAAAAAATAAATAAACGTGTTTATGTTAGTATAT
ATAAGGATGTCTACAGAAGCTAATTTAACATACATTACCTGATTGAAGACAAATTTGTAGTTAAAGCATACTCCCTTTGT
TCCAATTATTTGATGCTCTAGCTTTGCACAAAGTCAAACTTCTAAACATTTAACGAAGTGTATAAGAAAATATGCTAATA
TCTACAACATCAAATATATAT------------AGTACAATATAAAAATATATTTTATGATGAATCTAATGAATGCAAAT
TGGTATAGTATATGTTGATATTATAGACTTCGTCAAGCTTA---TTTTTTTTGACTTAGAACAAAGTTGCAACTTTAAAA
TAACTTCGAACAGAGAGAGTACAATATATTATTATTAACCATTGTGCCGCTGTTTCAGGGACCTATACGCAGAATATATC
CTGCAGAGTCTGAGGAACTAATCATAGTTGCAAACTCGCAAGGCTGCAGAAACCACCAACATGGTCTCGTAAAAGGACAA
TAATCGACTGCGTGGATTTTATTTAAAGACCCATTTTTTCTATATATTTAAATAATGGGACAATGCTATTCCCATACATA
TTTTTCTGCAGAACATTGTAATCAAGGACTAATGTTATACTTGTGTATAGTGTTTCATAATATTTGAATCAACACTTGGA
ACATTTAGTCTTGCCCTGTTGGCCTGAATTTCAAAATAATTATTTGGAAAAGACGATTGCCAGTCTTGAAGCAAAGTAGT
TAACACCTTTGTGTGTGTATGACTTTGAAGTGCATGGTGTGTGCTCCGG---AGCGTGAACTTTATGTA-------GTAC
ATGTGAGTACCATCCGAGTCCCGGAGCTGC------------------------------------------AGTGTGAT
TGTTCAGATT-ATATACATGCGTAAGAGCAACTCCACAAGGTCGCT------ATATCGGGCTAATTGGCATAATAACCGC
CGAAAAGGACACTCTAGCAGCTAT--------------CACGGGTCACCATAATTCATGGAGGGCCTCCGTATTCAGTCC
ACAAGCCTCCATATTTAGAGGATAGGGGAAGTTGGTTTGGAGGATGCGTCATCTACCAACCGCTTACGTGGGAGGGAAGT
TTCACCTCCATCATCAGACTCCTGCAAGGCCTATCTCCTCTTCCAGCCAATGACGCAGATGGCCATGGCATTGGGAAGCC
TGTTAGCTAATAGTATCCGCCGCGTGCCAACTTCCTCACCACCACCGCCCATAGC-------------------------
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------------------------------------CTCCACTTTCTCACCACCGCCGCCCATAGCCTCTACTTTCCT--
CACCGCCGCCGACAATATACACTGATGTTTTCG-----------------------------------------------
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-------------------------------------------------------GTGGACATGGCAGCGTGCGGCTAGC
ACAGTGAGGTCGATGTTGTTGGTCAGTAAGCGGAGAAA--AGGGTTGTGGAGCTCTATGGTTGT-----------CACCA
CAAACGATCGAGCAGCAGCGGAGCCGCCGTCATCAAATGTGTCATCGAAAAGAATAAGGTTAGAAAGATCCGGTTAGAAA
GA----TCAAGTGTTTAACCACCTGGAATTTTGAGAGCCGTCTTTGTCATGATCAGTCCATACGTCACTCTGTACGCCAT
----------------GGAGCAGAAGTGCTGTACGTCGGACTACTTACCATGCCTATATAACGCATTGCCGTTCGTATTA
CAGCAACGGGGC-AAATTAACCTGGTGCACAAACCA--------ACAGAGCAGACACGTAAAGTGAGGTA
>chr1D_615
TCGAGCCGCAAAATGA----------------------------------------------------------------
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---------------------------------------------------------------------GCAAATACGTT
AAATCCGCCGAAAATATCCGAGCCATCTGCTATAGCGGATCTGCTAAAGCTGCTCTTAGTTGGGAGTATAAGAATCCCAC
CGCCGAGCACCGTGGGACAAAAAAGCTTATTGACCAGGAGCCTAATAACAAACCAAGTGGCTACGTGCACCCA-------
-----GCCAGATCCCAGACCACTTAACGGTCAGCTCCTCATTGGCCAGATCTACCCTGAAAAAAAGAACTCTAAAAAACA
GCAAAGAAAAATCCTAGCTATATATA------GTAGCATTACTGTCTAATTCGGGAGCGCATGCAGGAGGTGTCCGAGCT
GCCGCTTCTCCCGCCACTTCTCCAGGATCTC-CAACCCACCTAGAGCTCTATAT----AAGCAACAACTGTTCCTGTGCT
TCATCTGTTCTTCTCCTGGTCATTTATATCCGTCATCCGACTCGATCCTTATCGAAATTTGGTATGTACCCAAACACG--
GCTCCTTCTCCTCGGATATCAATTTGCATTTTT-GTTTGGTCTGAAGAAGAAGAGGGGGTTTCTTGTTGCCCAGAAATTG
CAGTACCACGAGTACCTTTACTTTTTTTTCTTTCTCTATCTATTGGTTGTTCATTTGGAAGGAAATTCATGAGGATTTCC
TTGGGTGGTGGG------ATTGTAGGACAATGGCGGAAGGCAAGAAGGATGCTCCGAAGCTGAACCAGCGGATGGTATCA
TCTCTCTCGAAGCGAACTGCTGCGGCACATTCTTGGCATGATCTGGAGATAGGTAAATACATATATCCTG-------ATG
TCTTGCCTTCCATCAAAATTCTTTGCCCCGATCGGGATG--AAAAATGTGTTTCTCAAGGTCCATATATAATCTCATGTA
TAATTTCTCCAAATTCTAGGACCTGAAGCCCCTCTAATCTTCAATGCCGTAAGCATCTTGATCGACATACCCTATTGCCT
TGGCACGCTGTGTACGTAAATTACAGCAAATAGCTCAGATGCATCTCATAGTCTTGCATGAATTTAGGTTGTTGAGATCA
CAAAGGGGAGCAAAGTCAAGTATGAACTTGACAAGAAGACTGGGATGATAAAGGTACGCAC--ACATTCCCCACTTTCAG
CTTGGTGGTGTATGACAAGAAAGCTAAAAAAAGAATCCTCTTCACAATGGAGAACATGCATGAAAATTAAGCTATTTCTG
TAGGTTGACAGGATTCTGTACTCGTCCGTAGTCTACCCACATAACTACGGTTTCGTACCACGGACGCTGTGTGAAGATGG
AGATCCAATTGACGTCTTGGTCCTGATGCAGGTGAGTTTTGCATTACTGATGTCAAGTTTATGCAACTCACAAGGT----
--------GTC-------------------CGAGAATGTCTTATGAGTTCTGACTAACCTACACCTTCATAGGAACCAGT
CATACCTGGTTGCTTTCTTCGAGCTAAGGCTATTGGGCTTATGCCCATGATTGATCAGGCAAGATAGTTTTTTTTAAGAG
-TTCATTTATGAATA-----TGTCAATCTCACATTATGTCTGCCTGCTTGATACCGTGATTACTTTTTGGAACAAAAAGG
GTGAGAAAGATGATAAGCTCATTGCTGTTTGCGTTGATGATCCCGAGTACCGTCATCTCAACGACCTTAAGGAGCTCTCT
CCCCACCGCCTTGCTGAAATCCGTCGCTTCTTCGAAGATTGTACACTCTGTTTCCTCGCATATTATCGGA-TTTACGCCA
ACCATAGCGACATAAATGGTTTCCTTAAATGCTT-AGCTTATTTGATGTTATGCATCTGCAGACAAGAAGAATGAGAACA
AGGAGGTTGCTGTGAACGACTTCTTGCCACCGGAGACTGCACAGGCCGCCATTAAGCACTCCATGTGAGTTGTTTCTGAA
ATAGCTTTACAGGGTTAGCTACCAGCAATTAGTTATGCAAATGCATTTCAGAGGCATGCCTCC---ACATTATAATGAGA
TGGAAACTGACACCATCTACAGTTAAAACGTGTTTATGTTAGTGT-----------------------------------
GTAATGATGTCTACTGAAGC-----TAACATATATTACCTGGTTGAAGATAAATTTGTAG-TAAAGCATACTCCCTTTGT
TCCAATTATTTGATGTTCTAGCTTTGCACAAAGTCAAACTTCTTTAAATTTAACGAAG----------------------
---ACAACATCAAATATATATATATATATATATAGTACAGTACGAAAATATATTTTATGATGAATCTAATGAATGCCAAT
TGGTCTTGTATATGCTGATATTATAGACTTCGTCAAGTTTTTC---TTTTTTGACTTAGAACAAAGTTGCAACTTTAAAA
TAATTTCGAACAGAGAGAGTACAATATATTATTATTAACCATTCTGCCGCTGTTTCAGGGACCTATATGCAGAATATATA
CTGCAGAGTCTGAAGAACTAATCGTGGTAGCAAACTTGCAAGGCTGCAGAAACCACCCACATGGTCTCGTAAGAGGACAA
TAATCGACTACATGGCTTTTATTTAAGGGCCCATTTTTTCTATATATTTAAATAATGGGA-AATGCTATTCCCATACGTA
TTTTTCTGCAGAACATTGTAATCAAGGACTAATGTTATACTTGTGCATAGTGTTTCATAATATTTGAATCAACACTTGAA
ACATTTAGTCTTGCCCTGTTGGCCTGAATTTCAAAATAATTATTTGGAAAAGACGATTACCAATCTTAAAGCAAAGTAGT
TAACACCTTTGTGTGTGTATGACTTTGAAGTGCATGGTGTGTGCTCCGGCGGAGCGTGGACTTTATTCA----TATGTAC
ATGTGAGTACCATCCGCGTCCCGGAGCTGCTAGTTATCGGCATCGTCACAAGTGTTATTAAAATTTCAAAGAAGCGTGAT
TGTTGAGATTAATATACATGCATAAGAGCAACTCCAGCAGGGTCGCGATATCATATCGGGCCAACTGGCATAATAACCGC
CGAAA-GGCCACTCTAGCTAGCAGAGACGCCATCCTACCACGGGTCACCATAATTCATGGAGAGCATCCATAGTCAGTTC
GCAAGCGTCCATATTTAGAGGATAGGAGATGTTGGTTTGGAGAGTGCGCCATCTACCAACGGCTTACGTGAGAGGGAGGT
TTCAACTCCCTTGTCAGACTCCTGCAAGGCATATCTCCTCTTCCAGCCAATGGCGCAGATGGCCATGGCATTGGGAAGCG
TGTTAGCTAATAGCATCCGGCGCGTGCCAACTTCCCG-------------------------------------------
------------------------------------CCGCCATATTTTTCGGTCACCCGTTGCTACAAATTTTTATTTTT
TTTGGAAAAGGGGTGATTTCCCGGCCTCTGCATCAGGTGGATGCATACGGCCACTTAGATAAATAAAATAGGTTCCACAA
TGTCGAAAAAGTCGTAAAAGAAAACTACGTCGAGCTCACATAGACCTCGACACGAAAATACAAAAAAAGGCCATAAAGCC
ACAACCGGCTGGCAGAAAAATAGGTATGGAAACTAATTGCCAATCCTATTACATGACCGCCATCCAAACCGGTTGAATAT
ATCCCGCGCTACCATCTCCCACCGGACAGATCCAGTAACCAAACGCTCCCTGGCCTCCGTCGGAGTGAGTAGGGACCACA
TACGGATCAACGCCGTAGCTCGGAATACAACCTGCAAAAAATGAATAGTAGTTATTCTGTTAAAAGCCAAATCATTTCTG
CAGTTCCAAATTGCCCATAACAACGCACAAACTCCTACACGAATGTGTCTAGCTGTACCGGACTCTATCCCATCCAGCCA
CGTTCCAAATAACGACCCGACCGAACTCAGAGGAGTAATGTTAAAAGCAATTTGCACTGAGCGCCACAAGATTTTTGCCA
ACGGGCACTCAAAGAATAAATGTTTAATGGTTTCATCCCGATCACAGAAACTACACCTAGTAGATCCTGTCCAATTGCGC
TTAACCAAGTTGTCCTTTGTTAAAATGACCTGTTTATGGACAAACCACATAAACACTTTGATTTTCAAAGGAACTTTAAC
TTTCCAAACATGTTTGGAATTGGGAATGACACTCGAGTTAATAACATCGATGTACATCGATTTAACGGTAAAATGTCCAG
ACCTAGTAAGCTTCCAACACAACTGATCGGGCTGATGTTGTAGCTGAACGTCCATCAGTCTACGCACCAGATGAAGCCAA
GCTTCCCATCTATTACCAACAAGCACCCTCCTAAACTGAATATTAAGGGGTGTGGCCTGCATAATCGTTGCCACAAGCGC
ATCACGGCGATGCACAATACGATACAGAGTTGGGTACTGTAACGCCAACGGAGTCTCACCAAGCCAGGTGTCCTCCCAGA
AGCGAGTATCATTACCATCGCCGACTATAAACTTTGTTCTATTAAAGAAGGCTGTCTTAACTCTCATAAGCCCCTTCCAA
AATGGCGAATCAGTTGGTCGCATTGTCACCTGTGACAAAGTTTTGGATTGCAAATACTTGTTACGAAGTATCTGTGCCCA
AGTCGCATCAGTCCCATCTGATAACTTATATAGCCACTTACTAAGCAGGCATCTGTTCTTTACCTCAAGATTCTCAATAC
CCAACCCCCCCTGATCCTTGGGACGACAAATAATATCCCACTTGGCGAGTCTATACTTTCTTTTTAGATCATCACTCTGC
CAAAAAAATCTTGACCGATAAAAGTCCAGCCGTTTCCTAACCCCAACTGGAACCTCAAAGAAAGATAGTAGGAACATCGG
CAAACTTGTGAGCACCGAATTAATAAGAATCAACCGGCCTCCATAAGACAGAAGTTTGCCCTTCTAACAACTAAGTTTCT
TTTCGAACCGATCTTCGATACATTTCCATTCTCTGTTCGTGAGCTTACGATGATGAATGGGTATACCTAGGTAAGTAAAA
GGTAAAGCCCCTAATTCACAACCAAACAATTGCCTATAAGCCTCTTGTTCCTCCTTGGCTCGACCAAAGCAGAACAACTC
GCTTTTATGAAAGTTAATCTTTAAACCGGACAATTGTTCAAATAAGCACAACACCAGCTTCATGTTTCTCGCTTTTGCCA
AGTCATGCTCCATAGAGATGATTGTATCATCAGCGTATTGCAAAATGGACACACCCCCATCAACTAGGTTAGGCACCAAG
CCACCTACCTGACCGGCGTTCTTTGCCCTACCTATGAGAATAGCCAACATATCAACTACAATGTTGAACAATATAGGGGA
CATTGGATCTCCTTGTCTCGGGCCTTTGTGTGTCTGAAAATAATGACCTATATCCTCATTGACTTTAAGTCCAACACTAC
CTTTTTGCGTAAAGGATTCTACCTGGCGTCTCCAGGCCTCATCAAAACCCTTCATACGTAAAGCCTGTTGAAGGAAAGGC
CATTTGACTTTGTCAAACGCTTTTTCGAAATCCACTTTGAAAACAACCCCATCCAGCTTTTTCGTGTGGATTTCATGGAG
AGTTTCATGTAGGACCACAACACCCTCAAGAATGTTCCTGTCCGGCATGAAAGCCGTTTGGGTAGGCTGCACAACGGCAT
GCGCGATCTGTGAGAGCCTATTGGTCCCGACCTTGGTGAAAATTTTGAAGCCAACATTAAGAAGACAGATTGGCCTGAAT
TGCTCAATTCTCACTGCCTCTGCTTTCTTAGGAAGAAGGGTGATCGTTCCAAAATTTAGCTGAAAAAGATTAAGCTGCCC
AGCAAACAGATCATGGAACAAAGGCAACCAATCTCCTTTAATAATAAACCATCATTTCTTATAGAACTCCGCTGGAAATC
CATCTGGTCCAGGCGCTTTGTTAGTTTCCATTTGTGAGACGGCATCAAATACCTCTTTCTCGGTAAAAGGAGCCGTCAGA
ACATCATTCTCCACAACTGTGAGCTGAGGAACATCCTCAACCCTGGACTCATCCAGAGACACACAGTTATTGTCTGGAGG
ACCAAACAACTGCTTATAGAATTCAGTAATGTACAATTTTAGGTTCTCTTGTCCTACAATTGTACCCTCATCTTGCTCAA
GCTGAAAAATCCTCTTCTTTCGATGCTTATCATTAGCAATCATATGAAAAAATTCAGTGTTCGCGTCCCCCCGGACTATG
TTCGCGTCCCGTTGCTACAAAATGGGCGCACCATGTCTCCACTTTCTCACCATCGCCGCCCATAGCCTCCACTTTCTCAC
CACCGCCACCCACAATATACACGGACGTTTTTG-----------------------------------------------
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-------------------------------------------------------GTGGACATGGCAGCACGCGGCTAGC
ACGGTGAGGTCGATGTTGTTGGTCAGTCAGCGGAGAAAACAGGGTTGTGGAGCTCTATGGTTGTTTCCTGCCTGCCACCA
CAAACGATC--------------------TCATCAAATGTGTCATCGAAAAGAATAAGGTTAGAAAGATCTGGTGGGTGG
TCGTGTTCAAGTGTTTAACCACCTGGAATTTTGAGAGCCGTCTTGGTCATGATCAGTCCATACGTCACTTTGCACGCCAT
CGTGTGACGATTAACAGGAGCAGAAGTGCTATACGTCGGGCCACTTCCCATGCCTATATAACGCATTGCCATTCGTTTTA
CAGCCACGGGGCAAAATTAACCGGGTGCACAAACAAGAAACACGACAGAGCAGACACGTAAAGCGAG---
>chr1B_675
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---------------------------------------------------------------------------CCCAC
CGCCCAGCACCATCGAACAAAAATGCTTGTTGACCAGGAGCCTAATAACAAACCAAGTCGCTACGTGCACCCACTCGTGT
ACCCAGCCAGATCCCAGACTAATTAACGG-CAGCTCCTCATTGGCCAGATTACCCTG--AAAAAAAAACTCTAAAAAACA
GCAAAAGAAAATCCTAGCTATATATA------GTAGCATTACTGTCTAATTCGGGAGCGCATGCAGGAGGTGTCCGAGCT
GCCGCTTCTCCCGCCACTTCTCCAGGATATC-CAACCCACCTAGAGCTCTATATAATTAAGCAACAACCGTTTCTGTGCT
TCAAGTGTTCTTCTCCTGGTCATTCATATCCGCCATCCGACTCAATTCTTATCGAAATTTGGTAAATGCCCAAACG--CC
GCTCCTTCTCCTCAGATATCAATTTACAATTTT-GTTCGGTGTGAAGAAGAAGAGGGGGTTTCTTGTTGCCCAGAAATTG
CAGTACCACGAGTACCTTTACTTTTTTTTCTT----TCTCCATTGGTTGTTCATTTGGAAGGAAATTCATGATGATTTCC
TTGGCTGGGCATCGGGGAATTGTAGGACAATGGCCGAAGGCAAGAAGGACAATCCGAAGCTGAACCAGCGGGTCGTATCA
TCTCTCTCGAAGCGAACTGTGGCGGCACATTCTTGGCATGATCTCGAGATAGGTAAATACATACACATATCCTAATAATG
TCTCGCCTTCCATCAAAATTGTTTTCCCCCGATCAGTGTGAAAAAGTATATTTCTGAACGCTCGTATATAATCTGATGTA
TGAAATCTCCAAATTCTAGGACCTGAAGCCCCTCAAATCTTCAATGTTGTAAGCATCTT----GACATACTCTATTGCCT
TGGCACGATGTGTAAATTATACGTAGCAAATAGTTCAGAC--GCATCATTGTCTTGCACGCATTTAGGTTGTTGAGATCA
CAAAGGGGAGCAAAGTCAAGTATGAACTTGACAAGAAGACTGGGATGATAAAGGTACACAC--ACATTCCCCACTTTCAG
CTTGGCAGTGTATGGCAAGAAAGCTTAAGAAAT--TTCTTTTCACAATGGAGA----GCATTAAAATTAAACTGTTTCTC
TAGGTTGACAGGATTTTGTACTCGTCCGTAGTCTACCCACACAACTACGGTTTCGTACCACGGACGCTGTGTGAAGATGG
GGATCCACTCGACGTCTTGGTCCTGATGCAGGTGAGTTTTGCACTACTGATGTCAAGTTTATTCCACTCACAAGGTGATG
CACATTGTGTC-------------------CGAGAATGTTTTACGAGTTCTGACTAACCTACACCTTGATAGGAACCCGT
CATTCCTGGTTGCTTTCTTCGAGCTAAGGCTATTGGGCTTATGCCCATGATTGATCAGGCAAGATAGTTTTTTTTAAGAG
TTTCATTTATGAATA-----TATCAATCTCACATTATGTCT----GCCTGATACCGTGATTACTTTTTGGAACAAAAAGG
GTGAGAAAGATGATAAGATCATTGCAGTCTGCGTTGATGATCCCGAGTACCGTCATTTCAATGACCTTAAGGAGCTCTCT
CCCCACCGCCTTGCTGAAATCCGTCGCTTCTTCGAAGATTGTACACTCAGTTTCCTCACATATTATCGGATTTTACGTCA
ACCATAGCGACATAAATGGTTTCCTTAAGTGCTTAAGTTTATTTGCTGTTATGCATCTGCAGACAAGAAGAATGAGAACA
AGGAGGTTGCTGTGAATGACTTCTTGCCATCGAACACTGCACAGGTTGCCGTTCAGCACTCAATGTGAGTTGTTTCTGAA
ATAGCTTTACAGGGTTATCTATCAACAATTAGTTATGCATATGCATTTCAGAGGCATGCCTCCTCCACACTATAATGAGA
TGCAAACTGACACCATCTACAGTTAAAACATGTTTATGTTACTAC-----------------------------------
ATAAGGATGTCTACTGAAGCTAATTTAACATACATTACCTGATTTAAGATAGATTTGTAGTTAAAGCATACTCACTTTGT
TTAAATTATTTGATGTTCTAGCTTTGCACAAAGTCAAACTTCTTTACATTTAACGAAGTGTATAAGAAAATATGCTA---
TCTTCAAGATCAAACATATAT------------AGTACAGTACAAAAATATATTTTATGATGAATCTAATGAATG-----
--GTGTTGTATATTTTGATATTACAGACTTCGTCAAGCTCTTTCTTTCTTTTGACTTAGAACAAAGTTGCAACTTTAAAA
TAATTTCGAACAGAGAGAGTACAATATATTATTATTGACCATTCTGCCGCTGTTTCAGGGACCTATACGCAGAATATATC
CTGCAGAGTCTGAAGAACTAATCTTAGTTGCAAACTTGCAAGGCTGCAGAAACCACCCACGTGGTCTCGTAAGAGAACAA
TAATCGACTACATGGCTTTTATTTAAGGCCCATTTTTCCCTATATATTTAAATAATGGAACAATGCTATTCCCATACATA
TTTTTCTGCAGAACATTGTAATCAAGGACTGATGTTATACTTGTGCATAGTGTTTCATAATATTTGAATCAACACTTGAA
ACATTTAGTCTTGCCCTGTTGGCCTGAATTTCAAAATAATTATTTGGAAAAGGCGATTACCAATCTTAAAGCAAAGCAGT
TAGCACCTTTGTGTGTGTATGACTTTGAAGTGCATGGTGTGTGCTCCGG---AGCATGTACTTTATTCATATGTATGTAC
ATGTGAGTACC-TCCGAGTCCCGGAGCTGATAGTTATCGGCATCGTCACAAGTGCTGTTAAAATTTCAAACAAGTGTGAT
TGTTGAGATTAATATACATGCATAAGACCAACTCCAGCAGGGTCGCCATACCATATCGGGCCAATTGGCATAATAACCTC
CGAAAAGGCCACTCTAGCAGGTACGCCA----------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------TCCTCTTCCAGCCAATGGCGCAGATGGCCATGGCATTGGGAAGCG
TGTTAGCTAATAGCATCCGCCTCGTGCCAACTTCCCGCAGCCACTGCCGCCATATTTGCATTGGGAGGTGTGTTAGCTAA
TAGCATCCGCCTCGTGCCAACTTCCCGCAGCCACTACCGCCATATTTTTCAGTCGCCCGCTGCTATAAAATGGT------
--------------------------------------------------------------------------------
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------------------------------------------------------------------CTCCACTTTCTCAC
CACCGCCGCCCACAATATACACGGACGTTTTCGAAACGAAGGTAAAAGATTTGCCTCATCGATTAATTAAGTAGAAGAGA
GTTGCCCAGTTAATCAACGGAAAACCGGGCAAAAATCGATACAAACCAACCACATGTGGACTACTCACGAAGCATGCAAC
CCCGTAAAAGCACCAACCTGACAACCATACCCAACACATAACGACCACCAACCCCCACACTGCTACATCGCAAAGAAACC
CCTAACGAGAGTAACACAGCCGAAGACCACATGCACCACCAAATCCGCGCTGACAACTCAGACCATAAGGACAACCCAAG
GACTGATGACCATCAATCAAGCAGCTGCAGACGCCTTTCTTGTGGCGCCACTCTTCATTCTCTTGCTCCTGAGAGCCTCC
TCTACAATCGTGTTGCCAGATCCAGGGTTAGCCGCCTCCAAACGTTTGAGCAAGCTGTGAATCTCTATCTGGAAGAGAAT
ATCATTGATCTTGTCACGCACAGAAACCTGCCCAATGGTCTCGTGCGAGTGAGTGACTGTAACATCGGAATCTTCACGCT
CCACAATGGCGAGCAGCTGGCTGGGCTCCAAAGGATCAGGCGCCAACATGTTGACCGCCTCAACATTATTAGTCACAGAT
ACCATCGACACGATGTACTCAGACGCCTCTAGTTGCTCACATGACCTAGGCGAATCCTGCCCCTCAACAGGGTTCACCTG
CGAGACGACCTCCACATGCTCCAAAGACTGAGGCGAAGCAGGTCTCACACATAGTTGTTGAAGCTCGGGCATAATCTGCA
ACACAGGGGCAACGACTACGGCGATGTCCCTCGCTTACAGCGGCAGACATCGACGACAAGTTGTCCCCAACTCAAGGGGA
GAGACAACCATAGAGCTCTTCATCCATGTTCTCCATTGAGCCACCAACAATATCAACCTGACTAACAACATCAACCTGAC
TAGAAGGACGCAACATAGGAGTGGACTGTAGCACAACCGACACAAGAGAGAGCTTGTCCACGGCCATCTCCGCCCGCTCC
AGAAAGCTCCCAACACGCATCAACAGTTTGGCTTGAGTTGCTAAAGTGGACTGCAACAACACATCGGTTGGGGGTGTGCC
GAGCCAACATCATCAGAAACAATTGACGGCCAGGACCCTCGATGAAGCGCCTTGTAGGGGATCATGGATTTCATCACACC
CCCACAAGAAGCTGGAGCTCGACAATGCTCGGTGCTGAGGCGAGACAGTGGTTCAGTGGACATGGCA----GCGGCTAGC
ACAGTGAGGTCGATGTTGTTGGTCAGTCAGCGGAGAAC--AGGGTTGTGGAG----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------
>SNPs
S-S-SSSSS-SSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------
--------------------SS-SSSSSS-SSSS----------------------------------------------
------S-----S-------------------S---------S--------------------S------------S---
------------SS-----S---------------S-----------------S----S---------------------
S------SS-----------------SSSSSS----S-----SS----------------------S------------S
-------------------------------S---------------------------------S----------S---
---S---S--------SS--------------------SS-------------------S-------S---------S--
---------------------S-------S--SS------------S--S-----------S---S--SSSSS-------
--------------------------------------------S-----------------------------------
--------------------S-----------------------------S-----------------------------
--------------------S-------------------------------------S--S--S------------S--
--------S------------------------------S----------------------------------------
-----------------------------------S--------S-----------------------------------
----------------------------------------SS--------------------------------------
-----------------------------------------------------------S-SS-------S---------
-------------------------------SS--S-S--------S----------S----------------------
-----------------------------------S--------------------------------------------
---------------------------------------------------S----------------------------
---------SSSSSSSSSSSSSSSSSSSSS---------------S-----------------------S----------
---------------------------------------S------------------------S---------------
---------------SSSSS------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------S----------------------------------
------------------------------------------------------S-------------------------
-------------S-----------------------------------------------S------------------
---------------------------------S-------S--------------------------------------
S-----------------------S---------------S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
--------------S----------------------------------S------------------------------
---------------S---------------------------SS--------------------------------SSS
---------------------------------------S--S---------------------------------S---
----S-S---------------------------------S---------------------------------------
---S---------------------------------------S------------------------------------
-------------S---------S------------S--------------------S--------------S-------
---------S-S---S----------S-S---------------------------------------------------
---------------------------------------------S--------------------------------S-
----------------------------------------------------------S---S----S------------
----------------------------------------------------------S-------SS------------
--------------------------------------------------------------------------------
----S----------------S--------------SS---SSSSS---------------S------------------
--------S-----------S--S--------------------------------------S--S---S--S-----S-
S-----S-------------------S--S------------SS----S-----------S---------S------S--
----S----S-SS-----------------S---------------------S--------------------------S
-------------S---------------------SSSSSS-SSSSS-S-SSSSS-------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------S----------------S------SS--
----------S-----------S--S------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------------------------------------SS---------
---------------------------S----------------------------------------------------
---------SSSSSSSSSSSSSSSSSSSS-----------------------------------------S---SS-SSS
SS------------------------------------------S------------------------S--S-------
------------------------------S--------S-S----S-----------------------S-----S---
----S-----------------S-----------S----------------------------S---SSS
>forward_538
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------TAAATCACTTCGCAGCCGGT----------------------
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----------------------------------------------------------------------
>reverse_2012
--------------------------------------------------------------------------------
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-----------GCACATTGTGTCCGAGAATCG------------------------------------------------
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----------------------------------------------------------------------
>forward_539
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------AAATCACTTCGCAGCCGGTA---------------------
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----------------------------------------------------------------------
>reverse_2602
--------------------------------------------------------------------------------
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-----------------------------------------CGCATTTCAGAGGCATGCC--------------------
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----------------------------------------------------------------------
>forward_2025
--------------------------------------------------------------------------------
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-----GGTGATGCACATTGTGTCCG-------------------------------------------------------
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----------------------------------------------------------------------
>reverse_3790
--------------------------------------------------------------------------------
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-----------------------------AGTTGGTTTGGAGGATGCGT-------------------------------
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----------------------------------------------------------------------
