>input_sequence_36532
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--------------------------------------ATGAG---CCACGGGGCAATGGGAGGGCGCTGCTTCCTGAAC
CTCCTCCCCTGCTCCACGACCCCCTGCAAAGACAGCGTCGGCGTCGGCGTCGGCACGCCCGGTTCGTCGTCATGCCGCCA
CTCCGTCCACCACCACCGCGCCAGA---GCGCGCGGCCC---GAGGAGAAACGCGGCCGCCAGGGTGTCCTGCTCCGCCG
CCGCCGCGCAGGCGCCGCCGTCGCAGAGCACAATCAAGGTACCACTGCCACATGCAGAAGGGGAGTCGTGGCCGCTTGCT
TGTCTTCTGCTTGGACTGTCGTCTCTGACGCCCTGCTGTTCCCGTGGCGACTGAC---------TGCTTAAGGTGGTCAT
CGTCGGCGCGACCAAGGAGATGGGGAGGGCGGCGATCGCGGCGGTGAGCAGGGCGCGGGGGATGGAGCTCGCGGGCGCCA
TTGACACCCAGTGCATCGGGATGGATGCAGGAGAGGTGCGTGCTCTGCC--------------------------GCCTC
TGTTTTTTGCTCTGTTGCGGTTTGTGAAGTGCTGGTGTTGTTTCTTCAGCTAAGCGGCATGGAAGAAGCCCTGGAGATCC
CGGTGCTCAATGACCTCACCATGGTCCTCGGCTCCATAGCACAGGTACCAATTGCCAGAATCTTCATCCGGTGGAATGAT
GAT-------------------------TGCGCATGTCGCTGACCGCAGGCAGATTCTGCTATTTTCAGACAAGAGCAAC
TGGTGTGGTTGTTGACTTCAGTGAACCTTCATCCGTCTATGACAATGTCAAGCAGGTACATCATCCAACGTCAAGAATA-
-TACGAGCTCCATCCGCATTCATCCAGAATTGCAAATGCAGATTC-----AGGGAGTAGCAAACCGACTC---TAATAAT
ACCTCAAGAAAGCATTTCAGAAACATGATCGTAATGAGTATAATGCACTTCAGAACTAG----------TAAATTCATAC
GTTGTTCAGTTACTTTGTAGTACTCCAAGGAAGATGCACAATGAGATCTTTATTTATCAAATCTAAACTAAATGGAAGAG
CATAGTGGATGCTTAGA----TT-TTCAGGTTAATGAATCTTAGATGGATGCCTCAGACTCTGTAACATCTCCATCAGCA
CTTGAGATGTGAAACCTAATACACTA-CTGACCACCCAAAAATGGTTCACACGCAGGCAGCAGCATTTGGCTTAAGCAGT
G----TCGTATACGTTCCGAAAATCGAGATGGATACAGTAACTGAACTGTCAGCATTCTGCGACAAGGCAAGCATGGTAA
GGCTACTACTACTGCTCGATTGTTTCTAAAATTCACCATGATCAGAATATTCAAA-----CATGCAATCTTACATTGATT
TCATGACCAGGGTTGCCTGGTCGCGCCAACGCTGTCAATCGGC-----TCGGTGCTCCTTCAGCAAGCTGCAATCCAGGC
CTCATTCCACTACAACAACGTCGAGATAGTGGAATCAAGACCTAACCCATCGGTACGAAGCACTCCCGACAAGTTAACCC
TCTGCATTCACTATGATATGCAT---------------------------------------------------------
-------------------------GCCT-AAGGAAAACGTTTACAGTGCGCATCCATCAGGAAAATATA---TAGATAC
TGTTG-TCTAGATGTGCTATCAGCAATGTGCAGACTGCTAGACTGATGTTTTTGGCTTTGACAGGACTTGCCATCGCCAG
ATGCGATACAGATTGCGAATAACATATCTGATCTTGGTCAGATCTACAACAGACAAGATATGGATTCCGATAATCCAGTA
AGCGCAGCACAAAT-ATTCAGAAATTCTACTTTCAGTGTGCATTTGAGTTATCAAATTTTTATC----------------
------TCTATAATAACAACTTGAAAACAGTAAATGATGTGTTCTTCACAAACTGACTGGTTAGTGTTGAAAAGGCAAGA
GGTCAGGTACTTGGAGAAGATGGGGTGCGTGTGCACAGCATGGTTCTTCCAGGGCTTGCGTCGAGCACGTCGGTCGTTTT
GTCGGGCCCCGGAGAGGTACTTAAGCTGTAATAATACTTTTGACTGAACTTTGGATGAACTGACCACAATACCATTATTT
TCAGGTTTACACCTTGAAGCATGATGTTACAGACATCCAGAGCCTAATGCCAGGACTGATTCTGGCAATACGGAAGGTGA
TACGCCTGAAGGTAACTGGCACTGCACTTTTCATGTGGTGTACATGAGACAATGTCTTATTCACTGAAAAGATCGCTA--
------CATCTTTTGCAGAACTTGATTTATGGTCTGGAGAAGTTCTTGTAG-----------------------------
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>chr4D_1_TraesCS4D01G349000
AACCCCTTGCCTTTTGTCAGAGAACTGGCGGCTCGCAGTTCTGGCAGTCGGTCGTCCAGCTTCTCCCAGTCCTTCGCATC
GGGACTTCCATCTCGGTGGGGTCCGGCACGGAGACTTTGTTTTGGTTTGACCGGTGGGCCAGAGACTCCCCCTTC-GTTG
CGCGCTTCCCCGACCTCTTCTCCATAGTGGTAGACCCCTTGATCTCAGTTGAGAGGGCCCTTATTGACTTAGTGTGCCTT
GCTTTCCGGAGGCCCTTTGGCCCCCCTGAGTCCGCCGCTTGGCGTGAGTTACTAGATTGTGTGGCTCTCCACGAACCTGT
GGTGGACGGTGGCCCGGACCAGGTGAGATGGCGGCTCGAGCCATCGGGCCAATTCTCCACTAAGTCTCTCTACCATGCCA
TCGCCCCCTCCTCCGCCCCTCCCCCC-TTGCGACGGTGTGGTCCATCCGCTTGCCTCTGAAAATCCGGATCTTCATGTGG
CAGTGGATTCGCGGGCGGACCCCGTCGGGCGTTGAGGTCCGCAAGCGTAATGACCCGGGCTCTGGCCTTTGCCCGCTTTG
CGCCACACCCGAAGACTCGAACCACATCTTCTTTTCCTGTGTGTCCGCGCAATTCGTGTGGAGCTGCTTCCGCGAGGTGG
TGGGTGGAAATTGGTGCCACGCCAACTTCCCCGACCTGTATACGGAGCTCCAGTCCCTGCGTCCCTCTTGCTCTCCTCAT
CTTTTAGTGTGTGTTTTTTTATACTATGATCTTTTCTTTTTGAAATAGATACGGTCTTTCAGTGTTTGTTAGTAGCAGTT
TTATTCAGAACTTTGCTTGCTTTCAGTTTTCCAAACAGAAGAGAACTATTCAGATCAATTAAGATTTAAAGAGGCTTG--
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-----------------------------------------------------TAACAAACATGCAGCGTGACTGTGTGA
GCTGCTGCTG-----CCCAAGT----GATCACTCGTCCCAAGCCACTCGCTC------------ACTCACTATGGGCGTT
TCCAGCTTTGGCAACAAGATAAGATAGCTCACAGGAGCATGAG---CCACGGGGCAATGGGAGGGCGCTGCTTCCTGAAC
CTCCTCCCCTGCTCCACGACCCCCTGCAAAGACAGCGTCGGCGTCGGCGTCGGCACGCCCGGTTCGTCGTCATGCCGCCA
CTCCGTCCACCACCACCGCGCCAGA---GCGCGCGGCCC---GAGGAGAAACGCGGCCGCCAGGGTGTCCTGCTCCGCCG
CCGCCGCGCAGGCGCCGCCGTCGCAGAGCACAATCAAGGTACCACTGCCACATGCAGAAGGGGAGTCGTGGCCGCTTGCT
TGTCTTCTGCTTGGACTGTCGTCTCTGACGCCCTGCTGTTCCCGTGGCGACTGAC---------TGCTTAAGGTGGTCAT
CGTCGGCGCGACCAAGGAGATGGGGAGGGCGGCGATCGCGGCGGTGAGCAGGGCGCGGGGGATGGAGCTCGCGGGCGCCA
TTGACACCCAGTGCATCGGGATGGATGCAGGAGAGGTGCGTGCTCTGCC--------------------------GCCTC
TGTTTTTTGCTCTGTTGCGGTTTGTGAAGTGCTGGTGTTGTTTCTTCAGCTAAGCGGCATGGAAGAAGCCCTGGAGATCC
CGGTGCTCAATGACCTCACCATGGTCCTCGGCTCCATAGCACAGGTACCAATTGCCAGAATCTTCATCCGGTGGAATGAT
GAT-------------------------TGCGCATGTCGCTGACCGCAGGCAGATTCTGCTATTTTCAGACAAGAGCAAC
TGGTGTGGTTGTTGACTTCAGTGAACCTTCATCCGTCTATGACAATGTCAAGCAGGTACATCATCCAACGTCAAGAATA-
-TACGAGCTCCATCCGCATTCATCCAGAATTGCAAATGCAGATTC-----AGGGAGTAGCAAACCGACTC---TAATAAT
ACCTCAAGAAAGCATTTCAGAAACATGATCGTAATGAGTATAATGCACTTCAGAACTAG----------TAAATTCATAC
GTTGTTCAGTTACTTTGTAGTACTCCAAGGAAGATGCACAATGAGATCTTTATTTATCAAATCTAAACTAAATGGAAGAG
CATAGTGGATGCTTAGA----TT-TTCAGGTTAATGAATCTTAGATGGATGCCTCAGACTCTGTAACATCTCCATCAGCA
CTTGAGATGTGAAACCTAATACACTA-CTGACCACCCAAAAATGGTTCACACGCAGGCAGCAGCATTTGGCTTAAGCAGT
G----TCGTATACGTTCCGAAAATCGAGATGGATACAGTAACTGAACTGTCAGCATTCTGCGACAAGGCAAGCATGGTAA
GGCTACTACTACTGCTCGATTGTTTCTAAAATTCACCATGATCAGAATATTCAAA-----CATGCAATCTTACATTGATT
TCATGACCAGGGTTGCCTGGTCGCGCCAACGCTGTCAATCGGC-----TCGGTGCTCCTTCAGCAAGCTGCAATCCAGGC
CTCATTCCACTACAACAACGTCGAGATAGTGGAATCAAGACCTAACCCATCGGTACGAAGCACTCCCGACAAGTTAACCC
TCTGCATTCACTATGATATGCAT---------------------------------------------------------
-------------------------GCCT-AAGGAAAACGTTTACAGTGCGCATCCATCAGGAAAATATA---TAGATAC
TGTTG-TCTAGATGTGCTATCAGCAATGTGCAGACTGCTAGACTGATGTTTTTGGCTTTGACAGGACTTGCCATCGCCAG
ATGCGATACAGATTGCGAATAACATATCTGATCTTGGTCAGATCTACAACAGACAAGATATGGATTCCGATAATCCAGTA
AGCGCAGCACAAAT-ATTCAGAAATTCTACTTTCAGTGTGCATTTGAGTTATCAAATTTTTATC----------------
------TCTATAATAACAACTTGAAAACAGTAAATGATGTGTTCTTCACAAACTGACTGGTTAGTGTTGAAAAGGCAAGA
GGTCAGGTACTTGGAGAAGATGGGGTGCGTGTGCACAGCATGGTTCTTCCAGGGCTTGCGTCGAGCACGTCGGTCGTTTT
GTCGGGCCCCGGAGAGGTACTTAAGCTGTAATAATACTTTTGACTGAACTTTGGATGAACTGACCACAATACCATTATTT
TCAGGTTTACACCTTGAAGCATGATGTTACAGACATCCAGAGCCTAATGCCAGGACTGATTCTGGCAATACGGAAGGTGA
TACGCCTGAAGGTAACTGGCACTGCACTTTTCATGTGGTGTACATGAGACAATGTCTTATTCACTGAAAAGATCGCTA--
------CATCTTTTGCAGAACTTGATTTATGGTCTGGAGAAGTTCTTGTAGGAAATGATCAAGTCACATTCACATATCAT
GAGAACTAGAGGTCATTTTTTCGAGGAAGAGAACTACAGTTTTTGATCTTCCAGCTGTTCACCATAAGAGATAAATAGGA
TTAAATCAATTCCTTGGCTCATAATCAGATAAGTGCCAACGACAAAGCGGATCCGAGACCTAAGAACGCGATGCAGAGTT
TCGAAAAGAATGGCTCCATGCATAAGATGACACTTCTGATA-GAGGTCTAGACAATGAGCAAGCTGATGACAAGCTCTCA
TGTTTATACCTGGTGGCTTACTATACTGTTAGAGGCTTTTTCAGAACCATACTCATAGAGATAAATGATACCGGTCACGC
TATGATGCGGGTCCTTTCCGGTGTACCAACTTTTTTTTGGAACTCTAGTGTACCC-TTTAACTTGGTTTCGTCTACAACT
CTGAAAGCACTACAGGATTGCTAGACAGAAATCACTGCCGATAGGGCATTAAGAAATCACACAGGAGCATTGTAACTACA
AACATCGGTTCAAATATTCACAGCAGCATCAACAATGCAGGATATATCCTCAGCGCAGATGAGAATCCCAGGGCAATCCA
TGCACAAATTCGACATATTAACCGCCGATGCCAAAGAAAAGCCATACAACCTCTCAGCATGGTATATTCAGCATATATAT
GCCATACACAGGCAAAAT-AAAAAGCTAATGGAAAATTATCACAAAAGAATGTCGCGGCGGCATAACATGGTTCATCTTA
AACCATCTAGTTTTCACGGTACACTTCAATCATACAGAAATAACCAACTATCCTGTTTGTGAGCAAGGGTAGATTTTTTA
ACTAAATAACCCAACATGCAGATTAAAGTGTCAAACTGGCAGGATTAAATGTCTTGAAAGACATTAACAGACCTGTGTAA
CAAGATGAAACCATATCCAACAGATAAACTATCATGTGAGCACCAGTATTCAAGCCATGATCTTCGCCGACCTCATGTAA
AGACTGTCCACAAC
>chr5A_1
AACCCCTTGCCTTTTGTCAGAGAACTGGTGGCTCGCAGTTCTGGCAGTCGGTCGTCCAGCTTCTCCCGGTCCTTCGCATC
GGGACTTCCATCTCGGTGGGGTTCGCCATGAAGACTTTGTTTTGGTTTGACCGATGGGCCGGAGACTCCCCCTTC-GCTG
CGCGCTTCCCCGTCCTCTTCTCCATAGTGGTAGACCCCTTGATCTTAGTTGAGAGGGCCCTTATTGACTTAGGGCGCCTT
GCTTTCCGGAGGCCCTTTGGTCCCCCGGAGTCCGCTGCTTGGCGTGAGTTACTAGATTGCGTGGCTCTCCACGAGCCTAT
GGGAGACGGTGGGCCGGACCAGATGAGATGGCGGCTCGAGCCTTCGGGCCAATTCTCCACTAAGTCTCTCTACCATGCCA
TCGCCCCCTCCTCCGCCCCTCCCCCC-TTGCGACGGTGTGGTCCATCCGCTTGCCTCTGAAAATCCGGATCTTCATGTGG
CAGTGGATTCGCGGGCGGCTTCCGTCGGGTGTTGAGGTCCGCAAGCGTAATGTCCCGGGCTCTGGCCTTTGCCCGCTTTG
CGCCACCCCCGAAGACTCGAACCACATCTTCTTTTCCTGTGTGTCCGCGCAATTCGTGTGGAGTTGCTTCCGCGAGGTGG
TGGGTGGAAATTGGTGCCACACCAACTTCCCCGACCTGTATACGGAGCTCCAGTCC------------------------
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>chr5A_1
AACCCTTTGCCTTTTGTCAGAGAACTGGCGGCTCGCAGTTCTGGCAGTCGATCGTCCAGCTTCTCCCGGCCCTTCGCATC
GGGACTTCCATCTTGGTGGGGTCCGGCACGGAGACTTTGTTTTGGTTTGACCGGTGGGCCGGAGACTCCCCCTTC-GCTG
CGCGCTTCCCCGTCCTCTTCTCCATAGTGGTAGACCCCTTGATCTCAGTTGAGAGGGCCCTTATTGACTTAGGGCGCCTT
GCTTTCCGGAGGCCCTTTGGTCCCCCGGAATACGCCGCTTGGCGTGAGTTACTAGATTGCGTGGCTCTCCACGAGCCTGT
GGGGGACGGTGGCCCGAACCAGGTGAGATGGCGGCTCGAGCCTTCGGGCCAATTCTCCACTAAGTCTCTCAACCATGCCA
TCGCCCCCTCCTTCGCCCCTCCCCCCCTTGCGACGGTGTGGTCCATCCGCTTGCCTCTGAAAATCCGGATCTTCATGTGG
CAGTGGATTCACGGGCGGCTTCCGTCGGGCGTTGAGGTCCGCAAGCGTAATGGCCCGGGCTCTGGCCTTTGCCCACTTTG
CGCCACCCCCGAAGACTCGAACCACATCTTCTTTTCCTGTGTGTCTGTGCAATTCGTGTGGAGATGCTTCCGCGAGGTGG
TGGGTGGAAATTGGTGCCACACCAACTTCCCCGACCTGTATACGGAGCTCCAGTCC------------------------
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>chr6B_1
AACCCCTTGCCTTTTGTCAGAGAACTAGCGGCTCGCAGTTCTGGCAGTCGGTCGTCCAGCTTCCCCCTATCCTTCGCATC
GGAACTTCCATCACGGTGGGGTCTGGCACGAAGACTTTGTTCTGGTTTGACCGGTGGGCCGGTGACTCTCCCTTC-ACTG
CGCGCTTCCCTGACCTCTTCTCCATCGCTGTAGACCCCTTGATCTCAGTTGAGAGGGCCCTTATTGACTTAGGGTGCCTT
GCTTTCCGGAGGCCCTTTCGCCCCCCGGAGTCCGCCGCCTGGCGCGAGTTACTAGATTGCGTGGCTCTCCACGAGCCTGT
GGTGGACGGTGTCCTGGACAAGGTGAGATGGCGTCTCGAGCCTTCGGGCCAATTCTCCACTAAGTCTCTCTACCATGCCA
TCGCCCCCTCCTCCGCCCTCCCCCCT-TTGCGACGGTGTGGTCCATCCGCTTGCCTCTGAAAATCCGAATCTTCATATGG
CAGTGGATTCGCGGTCGGATACCGTCGGGCGTGGAGGTCCACAAACGTAATGGCCCGGGCACTGGCCTTTGCCCGCTTTG
CGCTAGCCCCGAAGACTCGAACCACATC---TTTTCTTGTGTGTTCGCGCAATTCGTGTGGAGCTGCTTCCGCGAGGTGG
TGGGTGGAAATTGGTGCCACACAAACTTCCCCAACCTGTATACGGAGCTCCAGTCC------------------------
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>chr7D_3
--CCCCTTGCCTTTTGTCAGAGAACTGGCGGCTCGCAGTTCTGGCAGTCGGTCGTCCAGCTTCTCCCGGTCCTTCGCATC
GGGACTTCCATCTCGGTGGGGTCCGGCACGGAGACTTTGTTTTGGTTTGACCGGTGGGCCGGAGACTCCCCCTTC-GCTG
CGCGCTTCCCCGACCTCTTCTCCATAGTGGTAGACCCCTTGATCTCAGTTGAGAGGGCCCTTATTGACTTGGGGCGCCTT
GCTTTCCGGAGGCCCTTTGGCCCCCCGGAGTCCGCCGCTTGGCGTGAGTTACTAGATTGCGTGGCTCTCCACGAACCTGT
GGTGGACGGTGGCCCGGACCAGGTGAGATGGCGGCTCGAGCCATCGGGCCAATTCTCCACTAAGTCTCTCTACCATGCCA
TCGCCCCCTCCTCCGCCCCTCCCCCCCTTGCGACGGTGTGGTCCATCCGCTTGCCTCTGAAAATCTGGATCTTCATGTGG
CAGTGGATTCGCGGGCGGATCCCGTCGGGCATTGAGGACCGCAAGCGTAATGGCCCGGGCTCTGGCCTTTGCCCGCTTTG
CGCCACACCCGAAGACTCGAACCACATCTTCTTTTTCTGTGTGTCCGCGCAATTCGTGTGGAGCTGCTTCCGCGAGGTGG
TGGGTGGAAATTGGTGCCACACCAACTTCCCCGACCTGTATACGGAGCTCCAGTCC------------------------
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>chr6D_3
--CCCCATGCCTTTTGTCAGAGAACTGGCGGCTCGCAGTTCTGGCAGTCCGTCGTCCAGCTTCTCCCGGTCCTTCGCATC
AGGACTTCCATCTCGGTGGGGTCCGGCACGGAGACTTTGTTTTGGTTTGACCGGTGGGCCGGAGACTCCCCCTTC-GCCG
CGCGCTTCCCCGACCTCTTCTCCATAGTGGTAGACCCCTTGATCTCAGTTGAGAGGGCCCTTATTGACTTAGGGTGCCTT
GCTCTCCGGAGGCCCTTTGGCTCCCCGGAGTCCGCCGCTTGGCGTGAGTTACTAGATTGCGTGGCTCTCCACGAACCTGT
GGTGGACGGTGGCCCGGACCAGGTGAGATGGCGGCTCGAGCCATCGGGCCAATTCTCCACTAAGTCTCTCTACCATGCCA
TCGCCCCCTCCTCCGCCCCTCC-CCCCTTGCGACGGTGTGGTCCATCCGCTTGCCTCTGAAAATCTGGATCTTCATGTGG
CAGTGGATTCGCGGGCGGATCCCGTCGGGCGTTGAGGTCCGCAAGCGTAATGGCCCGGGCTCTGGCCTTTGCCCGCTTTG
CGCCACACCCGAAGACTCGAACCACATCTTCTTTTCCTGTGTGTCCGCGCAATTCGTGTGGAGCTGCTTCCGCGAGGTGG
TGGGTGGAAATTGGTGCCACACCAACTTCCCTGACCTGTATACGGAGCTCCAGTCC------------------------
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>chr6D_3
--CCCCTTGCCTTTTGTCAGAGAACTGGCGGCTCGCAGTTCTGGCAGTCGGTCGTCCAGCTTCTCCCGGTCCTTCGCATC
GGGACTTCCATCTCGGTGGGGTCCGGTACGGAGACTTTGTTTTGGTTTGACCGGTGGGCCGGAGACTCCCCCTTC-GTTG
CGCGCTTCCCCGACCTCTTCTCCATAGTGGTAGACCCCTTGATCTCAGTTGAGAGGGTCCTTATTGACTTAGGGCGCCTT
GCTCTCCGGAGGCCCTTTGGCCCCCTAGAGTCCGCCGCTTGGCGTGAGTTACTAGATTGCGTGGCTCTCCACGAACCTGT
GGTGGACGGTGGCCCGGACCAGGTGAGATGGCGGCTCGAGCCATCGGGCCAATTCTCCACTAAGTCTCTCTACCATGCCA
TCACCCCCTCCTCCGCCCCTCC-CCCCTTGCGATGGTGTGGTCCATCCGCTTGCCTCTGAAAATCCGAATCTTCATGTGG
TAGTGGATTCGCGGGCGGATCCCGTCGGGCGTTGAGGTCCGCAAGGGTAATGGCCCGGGCTCTGGCCTTTGCCCGCTTTG
CGCCACACCCGAAGACTCGAACCACATCTTCTTTTCCTGTGTGTCCGCGCAATTCGTGTGGAGCTGCTTCCGCGAGGTGG
TGGGTGGAAATTGATGCCACACCAACTTTCCCGACCTGTATACGGAGCTCCAGTCC------------------------
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>chr7B_3
--CCCCTTGCCTTTTGTCAAAGAACTGGCGGCTCGCAGTTCTGGCAGTCGGTCGTCTACCTTCTCCCTGTCCTTCGCATC
GGAACCTCCATCTCGGTGGGGTTAGGCACGGAAACTTTGTTCTAGTTTGACCGGTGGGCCGGAGACCCCCCCTTC-GCCG
CGCGCTTCCCCGACCTCTTCTCCATCGCTGTAGACCCCTTGATCTCAGTTGAGAGGGCCCTTATTGACTTAGGGTGCCTT
GCTTTCCGGAGGCCCTTTGGCCCCTCGGAGTCCGCCACCTGGCGTGAGTTACTAGATTGCGTGGCTCTCCACGAGCCTGT
GGTGGATGGTGGCCCGGACCAGGTGAGATGGCGGCTCGAGCCTTCGGGCCAATTCTCCACTAAGTCTCTCTACCATGCCA
TCGCCCCCTCCTCCGCCCCTCCCCCC-TTGCGACGGTTTAGTCCATCCGCTTGCCTCTGAAAATCTGGATCTTCATGTGG
CAGTGGATTCACGGTCGGATACCGTCGGGCGTGGAGGTCCGCAAACGTAATGGCCCGGGCACTGGCCTTTGCCCGCTTTG
CGCTACCCCCGAAGACTCGAACCACATCTTTTTTTCTTGTGTGTCCGCGCAATTCGTGTGGAGCTTCTTCCGCGAGGTGG
TGGGTGGAAATTGGTGCCACACCAACTTCCCCGACCTGTATACGGAGCTCCAGTCC------------------------
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>chr3B_3
--CCCATTGCCTTTTGTTAGAGAACTGGCGGCTCGCAGTTCTGGCAGTCGATCGTCCAGCTTCTCCCTGTCCTTCGCATC
GGAACTTCCATCTCGGTGGGGTCAGGCACGGAGACTTTGTTCTGGTTTGACGGGTGGGCCGGAGACTCCCCCATC-GTTG
CGCGCTTCCCCGACCTCTTATCCATCGCTGTAAACCCCTTGATCTTAGTTGAGAGGGCCCTTATTGACTCAGGGCGCCTT
GCTTTCCGGAGGCCCTTTGGCCCCCCGGAGCCCGCCGCCTGGCATGAGTTACTTGATTGCGTGGCTCTCCACGAGCCTGT
GGTGGACGGTCACCCGGACCAGGTGACATGGCGGCTCGAGCCTTCGGGCCAATTCTTCACTAAGTCTCTCTACCATGCCA
TCGCCCCCTCCTCC---CCCCCCCCC-TTGCGACGGTTTAGTCCATCTGCTTGCCTCTAAAAATCTGGATCTGCATGTGG
CAGTGGATTCGTGGTCGGATACCGTCGGGCGTGGAGGTCCGCAAACGTAATGGCCCGGGCACTGGCCTTTGCCCGCTTTC
CGCTACCCCCGAAGACTCGAACCACATCTTCTTTTCCTGTGTGTCCGCGCAATTCGTGTGGAGCTGCTTCTGCGAGGTGG
TGGGTGGAAATTGGTGCGACACCAACTGCCCCGACCTGTATACAGAGCTCCAGTCC------------------------
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>chr1A_3
--CCCCTTGCCTTTTGTCAGAGATCTGGCGGCTCGTAGTTCTGGCAATCGGTCGTCCAGCTTCTCCCTGTCCTTCGCATC
AGGACTTCCATCTCGGTGGGGTCCGGCTCGGCAACTATGTTCTGGTTTGATCGGTGGGCCGGAGACCCCCCCTTTTGCCG
CGCGCTTCCCCGACCTCTTCTCCATCGCGGTTGACCCCTTGATCTCAGTTGAGAGGGCCCTTATTGACTTAGGGCGCCTC
GCTTTCCGGAGGCCTTTTGGCCCCCCGGAATCCTCCGCTTGGCGTGAGTTGCTAGATTGCGTGGCTCTCCGTGAGCCTGT
GGTGGACGGTGGCCCGGATCAGGTTAGATGGCGGCTCGAGCCTTCGGGCCAATTCTCCACCAAGTCGTTGTACCAGGCCA
TCGCCCCATCCTCCGCTCCTCCCCCC-TAGCCACGGTGTGGTCCATCCGCCTACCTCTGAAAATCCGGATCTTCATGTGG
CAGTGGATTCGCGGTCGGATCCCGTCTGGCGTTGAGGTTCGCAAACGCAATGGTCCGGGCTCTGGCCTTTGCCCGCTTTG
CGCCACCCCCGAAGACTCGAATCACATCTTCTTTTCCTGTGTGTCCGCGCAATTCGTTTGGAGCTGTTTCCGCGAGGTGG
TGGGTGGAAATTGGTGCCACGCCAACTTCCCCAACCTGTATACGGAGCTCCAG---------------------------
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>chr5A_692
TCCCAGT-------------------------------------------------------------------------
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------------------------------------------------------------GTCCCTCTTGCTCTCCTCAT
CTTTTAGTGTTTTTTTATTTGATGTTCTGATCTGAGGAAACTGATAGGTTCCTATTTC----------------------
-----CAGAACTTTGCTTGCTTTTAATTTTCCAAACAGAAGAGAACTATTCAGATCAATTAAGATTTAAAGAG-------
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--------------------------------------------------------------TGCAGCGTGACTGTGTGA
GCTGCTGCTACCCAACCCAAGT----GATCACTCGTCCCAAGCCACTCACTCG------------CTCACTATGGGCGTT
TCCAGCTTTGGCAACAAGATAGGATAGCTCACAGGAGCATGAA---CCACGGGGCCATGGGAGGGCGCTGCTTCCTGAAC
CTCCTCCCCTACTCCACGACCCCCTGCAAAGACGGCGTCGGCATCGGC------ACGCCTGGTTCGTCGTCATGGCGCCA
CTCCGTCCACCACCACCACCGCACCAGTAAGGTCGTCGCCGGGAGGAGAAGCGCCGCGGCGAGTGTCTCCTGCTCCGCCG
CATCCGCGCAGGCGCCGCCGTCGCAGAGCACAATCAAGGTACTGCTACCACATGGCATGGAATTGATTAAGGGGGTCATT
AAG---CTGCTTGGAATGTCATGTCTGACGCCCTGCTGTTCCCCTGGCGACGTACGTTGGGAATTGATTCAGGTGGTCAT
CGTCGGCGCCACTAAGGAGATGGGGAGGGCGGCGATCGCGGCGGTGAGCAGGGCGAGGGGGATGGAGCTCGCGGGCGCCA
TTGACACCCAGTGCATCGGGATGGATGCAGGAGAGGTGCGTGCTTGCTTGCTCACCACTCGTTCCCGTGTGCTCTGCCTC
TGTTTTTTGCTCTGTTTCAGTTTGTGAGTGCTTCGTGTTGTTTCTTCAGTTAAGTGGCATGGACGAAGCCCTGGAGATCC
CGGTGCTCAATGATCTCACCATGGTTCTCGGCTCCATAGCACAGGTATCGATTAGC---ATCTTCACCTGTGGAATGTTG
ACTCATCATGTGCTTCCTTT---TCGGGTGCGCGTTTCGCTGACCGCAGGCAGATTCTGCTCTTTTCAGACAAGAGCAAC
TGGTGTGGTTGTTGACTTCAGTGAACCTTCATCCGTCTATGACAATGTCAAGCAGGTACATTATCCAATGTCAAGAATA-
-TACGAGCTGCATCCGCATTCATCCAGAATTGCAAATGCAGATTC-----AGGGAGTAGCAAACCGAAACTAATAATATC
ATCTCAAGAACGCATTTCAGAAACCGGGACGATGATC-------GCACTTCAGAACTAG----------TAAATTCATAC
GTTGTTCAGTTACTTTGTAGTACTGTAAGGAAGATACACAATAAGATCTATATTTATCGAATTTAAATTAGATTGCAGAA
CATAGTGGATGCTTAGA----TTGTTCAGGTTAATGAATCTTAGATGGATGCCTCAGACTATGTAACATCTCCATCAGCA
CTTGAGATGTGAAACCTAATACACTA-CTGACCACCCAAAAATGGTTTACACGCAGGCAGCAGCATTTGGCTTAAGCAGT
G----TCGTATACGTTCCGAAAATCGAGATGGATACAGTAACTGAGCTGTCAGCATTCTGCGACAAGGCAAGCATGGTAA
GGCTACTACTGC---TCGATCGTTTCTAAAATCCATCATGATCAGAATATTCAAA-----CATGCAACCTTATGTTGAGT
CCATGATCAGGGTTGCTTGGTCGCACCAACGCTGTCGATTGGC-----TCGGTACTCCTTCAACAAGCTGCAATCCAGGC
CTCATTCCACTACAACAACGTCGAGATAGTGGAATCAAGACCTAACCCATCGGTATGAAGCACTCCCAACAAGTTAACCC
TCTGCATTCAGTATGATATATGGATGTCTTCCAATCATTTGCATCACAGAACATTAGGTGCGGCTAATATTTTACCGCCT
TGCAATCACAAGCAAGAGGGGAAAAGCCC-AAGGAAAACGTTTACAGTACCCATCG----GGAAAATAAA---TAATTTT
GTG-----TAGATGTGCTATTAGCAATGTGCAGATTGCTAGACTGATG--TTTGGCACTGACAGGACTTGCCATCGCCAG
ATGCAATACAGATTGCGAACAACATATCTGATCTTGGTCAGATATACAACAGACAAGATATGGATTCCGATAATCCAGTA
AGTGCTACACAAAC-ATTCGAAAATTTTCCTTTCGGCGTAAATTTTTAGAAGTAACATTGGCAGGAGCACTGATATGTCA
CTTTATTCCAAATTATAAACTTGAAAACTGCAAATGATATGTTC--CACAAACTAACTGGCTAGTGTTGAAAAGGCGAGA
GGTCAGGTACTTGGAGAAGATGGGGTGCGTGTGCACAGCATGGTTCTTCCAGGGCTTGCTTCGAGCACGTCGGTCGTTTT
GTCTGGCCCCGGAGAGGTACATAAGCCCAAATAATACTTTTGACTGAACTTTGGATGAACTGACTACAGTACCATTCTTT
TCAGGTTTACACCTTGAAGCATGATGTTACAGACGTCCAGAGCCTAATGCCAGGACTAATTCTGGCAATACGGAAGGTGA
TACGCCTGAAGGTAACTGGCACTGCACTTTTCATGTGGTGTACTTGAGACAATGTCTTATTCACTGAAAAGATCACTA--
------CATCTTTTGCAGAACTTGATTTATGGTCTGGAGAAGTTCTTGTAGGAAATGATCAACTCACATTCACATATCAT
GAGGACTAGGGGTCATTTTTTCGAGGAAGAGAACTACAGTTTTTGATCTTCCAGCTGTTCACCATAAGAGATAAATAGGA
TTAAATCAATTCCTTGGCTCATAATCAGATAAGTGCCAACGACAAGGCGGATCCGAGACCTAAGAACGCGATGCAGAGTT
TCGAAAAGAATGGCTCCATGCATAAGATGACACTTCTGATAAGAGCTCTAGACAATAAGCAAGCTGATGACAAGCCCTCA
TGTGTATACCTGGTGGCTTACTATACTGTTAGAGGCTTTTTCAGAAGCATACTCATAGAGATAAATGATACCAGTCACGC
TATGATGCGGGTCCTTTCCAGTGTACCAACTTTTTTTTGGAACTCTAGTGCACCCTTTTAACTTGGTTTCGTCTACAACT
CTGAAAGCACTACAGGATTGCTAGACAGAAATCACTGCCGACAGGGCATGAAGAAATCACACAGGAGCCTTGTAACTACA
AACATCAGTCCAAATATTCATAGCAGCATCAACAGTGCAGGATATATCCTCAGCGCAGATGAGAATCCCAGGACAATCCA
TGCACAAATTCGACATATTTACCGCCGATGCCAAAGAAAAGCCATACAACCTCTCAGCATTGTATATTCAGCA-------
---ATACACAGGCCAAAAAAAAAAGCTAATGGAAAATTATCACAAAAGAATGTCGCGGCAGCATAACATGGTTCATCTTG
AACCATCTAGTTTTCAAGGTACACGCCAATCATA----------------------------------------------
--------------------------------------------------------------------------------
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--------------
>chr4B_804
--------------------------------------------------------------------------------
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-----CAGAACTTTGCTTGTTTTCAATTTTCCAAACAGAAGAGAACTATTCAGATCAATTAAGATTTAAGAGAAAAGCAT
GTTTTTGGTCTCTCAAGTCATTTTTTGGTATACATTTGGTCCTTCAAGTCTCAAAACCGGATAAGTCTGGTCCAAAACCA
GATTTTAAGCACGTTGACCGGGTTTGACCATGTTTGACCACGTTCACTTGTACTAACAAACATGCAGCGTGACTGTGCGA
GCTGCTGCTACCCAACCCAAGTGATCGATCACTCGTCCCAAGCCACTCACTCACTCACTCACTCACTCACTATGGGCGTC
TCCAGCTTCGGCAACAAGATAAGATAGCTCACAGGAGCATGAACTACCACGGGGCAATGGGAGGGCGCTGCTTCCTGAAC
CTCCTCCCCTGCTCCACGACCCCCTGCAAAGCCGGCGTCGGCATCGGC------ACGCCCGCTTCGTCGTCATGCCCCAA
CTCCGTCCACCACCACCGCACCCGATCAGCGCGCGGCCC---GAGGAGAAACGCGGCCGCCAGGGTGTCCTGCTCCGCCG
CAGCCGCGCAGGCGCCGCCGTCGCAGAGCACCATCAAGGTACTGCTGCCACATGCAGAATGGGGGCCGTGGCTGCTTGCT
TGTGTTCTGCTCGGACTGTCGTCTCTGACGCCCTGCTGTTCCCCTGGCGACTGAC---------TTCTTAAGGTGGTCAT
CGTCGGCGCGACCAAGGAGATGGGGAGGGCGGCGATCGCGGCGGTGAGCAGGGCGCGGGGGATGGAGCTGGCGGGCGCCA
TTGACACCCAGTGCATTGGGATGGATGCAGGAGAGGTACGTGGGTGC---------------------GTGCTCTGCCTC
TGTTTTTTGCTCTGTTGCGGTTTGTGAGTGCTGTGTGCTGTTTCTTCAGTTAAGTGGCATGGACGAAGCCCTGGAGATCC
CGGTGCTCAACGACCTCACCATGGTTCTCGGCTCCATAGCACAGGTACCAATTGGCACAATCTTCATCCGTGAAACGATG
ATTTATCTATCATGTGCTTCTTGTCGGGTGCGCGTTTCGCTGACCGCAGGCAGATTCTGCTCTTTTCAGACAAGAGCGAC
TGGTGTGGTTGTTGATTTCAGTGAACCTTCATCCGTCTACGACAATGTCAAGCAGGTACGTTATCTATCTAATGAATCTA
CTACGAACTCCATGGGCATGCATCCAGAATTGCAAAAGCCTAATTCAAGTAGGAAGTAGCAAACCAATAC---TAGTAGT
ACCTCAATAAAGCATGTCAGAAACCACAACAATGGTG-------GTACGGTAATGCCGCCATTCAGGACTAAATTCATAC
GCTGTTCAGTTACTTAGTACTACTCCCAGGAAGATGCAGAATAACATCTTTACTTGTAGAATGTAAACTGAATTGCAAAA
CAAAGTGGATGCTATGCTACCTT-TTCAGGTCAATGATTCTTGGATGGATGCTTCAGGCTGTGCAACCTCTCCATTGACA
CTTGGATGAAATCTACTAATACACTATCTGACCACCCAAAACTGGTTCACACGCAGGCAGCAGCATTTGGCTTAAGCAGT
G----TGGTATACGTTCCGAAAATCGAGATGGACACAGTAACTGAACTGTCAGCATTCTGCGACAAGGCAAGCATGGTAA
GGCTACTACTGCT-CTCGATTGTTTCTAAAATTCACCATGATCAGAACATTCAAACATAACATGCAACCTTATGCCGAGT
CCATGGCCAGGGTTGCTTGGTCGCACCGACACTGTCGATCGGC-----TCGGTGCTCCTTCAACAAGCTGCAATCCAGGC
CTCATTCCACTACAACAACGTCGAGATAGTGGAATCAAGACCTAACCCATCGGTACGAAGCACCTCCGACAAGTTAACCC
TCTGCACTAACCATGATATGCAT---------------------------------------------------------
-------------------------GCCTAAGGAAAAAAGTTTACAGTACCCATGA----GGAAAACATCTACTAGATAC
TGTTG-TCTAGATGTGCTATCAGCAATGTGCAGATCGCTAGACTGATGTATTTGGCATTGACAGGACTTGCCATCGCCAG
ACGCGATACAGATTGCGAATAACATATCTGATCTTGGTCAGATATACAACAGACAAGATATGGATTCCGATAATCCAGTA
AGCGCAGCACAGAT-ATTCAGAAATTTTACTTTCGATGTGCATTTGAGTAATC-AATTTTCATC----------------
------TCTATAACAGCAACTTGAAAACAGTAAATGATGTGTTTTTCACAAACTGACTGGCTAGTGTTTTAAAGGCCAGA
GGTCAGGTACTCGGAGAAGATGGAGTGCGTGTGCACAGCATGGTTCTTCCAGGACTTGCCTCAAGCACGTCGGTCGTTTT
GTCGGGCCCCGGAGAGGTACTTAAGCTCTAATAATACTTTTGACTGAACTTTGGATGAACTGACCACAGTAACAATATTT
TCAGGTTTACACCTTGAAGCATGATGTTACAGATGTCCAGAGCCTGATGCCAGGACTGATTCTGGCAATACGGAAGGTGA
TACGGTTGAAGGTAACTGGCGCACTCCTTTTTCTTCAGTATGTATTCCAGAGACAGCATCTCTACACCGAAACAAATAAT
TAATCGCATCTTTTGCAGAACTTGATTTATGGCCTGGAGAAGTTCTTGTAGGAA--------------------------
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>chr4B_2105
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-------------------------------------AAAAATGGTTTATGCGCAGACAACAGCGTTTGGCTTAAGCAGT
ATCTATCGTATACGTTCCCAAAATCGAGATGGATACAGTAACCGAGCTGTCAGCATTCTGCGAGAAGGCAAGCATGGTAG
GACT-------------GATTATTTCTAAAATTCACCACGCTCAGATTATTAAAC-----CATGCGATCTTACGCCGAGT
TCATGATCAGGGCTGCTTGGTAGCACCGACACTGTCGATTGGATCGGATCGGTACTCCTTCAGCAAGCTGCAATCCAGGC
CTCATTTCACTACAATAACGTCGAGATTGTGGAATCAAGGCCTAACCCATCGGTAAGGAGCATCCCTAACAAATGAAA--
--------------------CAT---------------------------------------------------------
-------------------------GCCA-ATGGAAAACGTCTACATTGCTCATCA----AAAACAGAAATACTATTGCC
AAGAAATCGAGATATGTTATCATCAGTGTGCAGATTGCTAGACTAATCTTTGACATTGA-ACAGGGCCTGCCATCGCAAG
ACGCAGTACAGATTGCAAATAACATATCTGATCTTGGTCAGATATACAACAGGGAAGATATGGACGCTAATAATCCACTA
AGTGTGACAAAAATAATTCAGCAATTTTCCTTTCAGAGTGATTT------------------------------------
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--------------
>SNPs
-------------------------------------------------------------------S------------
------------------------------------------------------------S-------------------
------------------------------------------------------------------------S-------
--------------------------S--------------------------------S--------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------S--------------------------------S---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------SSSS--------------------
----------S-S---S---SSSS-SSSSSSS-SSSSSSSSSS-SSS-S-S-SS-S-SSSSSSSSSSSSSSSSSSSSSSS
SSSSS--------------------S-----------------------------------------------SSSSS--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------S--------------------------------------S-------------------------------
------------------------------------------S-------------------------------------
---------------------------------S--------S-----SSSSSS--------------------------
-------------------S------------------------------------------------------------
-S----------------------------------------SS-------------------S-S------S-------
---S---------------------------------------S------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------SSSSS-------------------------------
---------------------------SSSSS-S---------------S----S--------S----------------
-------------------------S----------------------------S--S------------SS-S-SSSSS
SS-------------------------------S-S-------------------------S------------------
-------------------------------------------------------------S------------------
-------------------------------------------------------------------SS---------S-
------------------------SS--S--SSSSSSSSSSSSS------------------------------------
------------------------------------------S---------------S---S----------S-S---S
------------------------------------------------------------S-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------S--S-----------------------------------------------------------S----S-
----------------S-------S-----------S-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------S----SSSSS--------------------
----------------------------------S---------------------------------------------
-------------------------------------------S------------------------------------
--------------------------S----------------------S----------S-------------------
---------------S--------------------------------------------S---------------S---
-----------------------------------------------------------S--------------------
---------------------------S----------------------------------------S-----------
----------------------------------S---------------------------------------------
--------------------------------------------------------------------------S-----
--------------------------------------------------------------S-----------------
---S-----S----------------------------------------------------------------------
---------------------------------------------S----------------------------------
---------------------------------------------S----------S------------------S----
---S------------------------------------------S-------------------------S-------
-------------------S------------------------------S-----------------------------
-----------------------------------------S-------S------------------S-----------
------S--S----------S-------------S-------------------------------------S-------
-------------------S----------------------------------------S------------SSSSSSS
SSS----------S---S-----------------------------------------S-------------------S
----------------S-------SS--------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSS
>forward_533
--------------------------------------------------------------------------------
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---------------------------------GAGGTCCGCAAGCGTAATGA---------------------------
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>reverse_2559
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------------------------------------------------------------------------------TT
TCATGACCAGGGTTGCCT--------------------------------------------------------------
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>forward_1744
--------------------------------------------------------------------------------
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--------------------------------------------TTCAGCTAAGCGGCATGGAA----------------
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>reverse_3726
--------------------------------------------------------------------------------
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---------------------------------------------AGCGGATCCGAGACCTAAGA---------------
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--------------
