>input_sequence_36501
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------------------------------------------------ATGCAGGGGAACATGGCGAGGCTGGTGTCGTC
TTCCCTCCTCAGGGGGCTCGCGCGGTCGTGCCGCGCGCCCAGCACGGCGGTAAGTGCCGGCACCTTCATCTG-TTCATAG
TTCTGAGCTTTTCCCGATTTATTTTCGCTCAACTGGTCCGAGCTCTGATCGAGCCCCAAAATCCCCAAATTGCTGTCAGG
TTCATTGGGACCTAGTAAGCTAATCGGTTCACTCGTTTACAGTTGCATAAATTTAATGTTACATTCATCTGTACC-----
---ATCTC--TCTATCACGAGATTGTTTGATAAGAGCTATCATGATGACCCTGGTTTTCACCTTTTTTTAAAGCATATCA
TGTCTAGAGATGAGACTCCGGTGGCCCCATATATTTTAACCAAAAATCCACATGTGTAGAGTTGAGCTCATTTCAGCATT
TGCCATGACCATTTGTGCTATAAGGCAGCCATTATTATGTCTGAATGGATGTTATGGATGCTATAGTTCTCTACCAAGTG
GTTTCCTGTAAACGTGTTCCATTTAAATGGGATGTTTATGCAACCTGTTTAATGCTGTACGCCTGCATGGAGAGTGCTTC
GGTGAGGCTGGAGCCACCTCCCGGCTCTGAGCCTTATAATGCTATAAACTGGTGGTTG-TTTGGTTTCATTTTAAATGGA
ACAGTGTCTATGAGATTTAAAGAAGGTTACATGGTTAGTTTCAGCTTAGACTTGCAATGTTATCACAGTTGAGGTTTTCT
CGTTAGCTTCTGGGCATCAA--------TTGTCCTTTTTGCTCTGTGCTTACACTATAGTATTTTCAAGCTTTATTTTGC
TTCCAGTTTATCAAAGAACCAACCAATGTTGCACTATCAGCTTTTGTCAAGCAAAATCAGATTGTTTCTGTTTTGATTTT
GATCTCATGTTTGCACAATGACCTTGTTTTG-CATGATAACTGGAAAAGCAGACCGTGTCACGACCAGCTTTCCAACAGT
TCATGAACTACTCATCAGGAATCAGTGGTGATTCTAACGTGAATGGCGGCACAAGTGCAACACGAGTAACCGCTGATACT
GATACACATCAAGATTTCCAGCCTACAAGCAAAGGTTCTGACATGTCTTTGCAAGACATCGTTGCTCAGGTATTTATATG
CACACATGAGCTTCAGAACATTTATATTCAATCTCTTGAAATGTAACAAAAATACGCATGGCATGAAAATTGTAAAGCTT
AATGTTGTGTCATATTCTTCTGCTGTTAATTAATTTCCTTGATGAAATCTTTGCCAGGATATCAAGGAGAATCCAGTCGT
TATCTTCATGAAGGGTTATCCTGAAGCTCCCAGGTGTGGATTTAGTGCACTGGCAGTTAAGGTCCTCCAGCAATATGGTA
AGCTATATCTCAGAACCAGCTCTCAGTCAATTGTGCCCCTGAAATCCCTAAATCATATCTTGTCTATTGCAGGCGTCTCT
ATCACTGCCAGAGATATTCTGAGTAATATGAAGCTCAAGGAGAGTGTCAAAGCTTACTCGTAAGTTGCTCGTCATAACCT
CCCTGATGTTGTACTTTCAGTTTTAGATGGAAGACAATTGTCTCAAAAAGGAAAAAAAAAAAAGGAACTAGCCATG----
----------------------GGAATAGGGTATGGGATGATGTGGTAAAGAAAATATTTTACTATGGGTTAAGATTTAG
CTTCAACAACAGATGATAAAACATACAGAATATGATTTTGATTTA-GC----TGGAGGCTTTACTTGGAACAGA-TTCGT
CGAAAACATGTTGTGTGCCCTTGATTACAACATTGGAGAGTTCTACTTAATGTTCAACTTTCAGAGTTCCAATTTTATTC
AGTTTCATTCATATGCATCATGGCGGAAATGACAAATGGATAATTTAACACCTGTTGCTAAGCTGCCGGGGTTTACAAAT
TATGTATCTCCTGATGGTATCATTATTAAAGCTACTGTTTGTTTGTGCAGTAACTGGCCTACCTTTCCGCAAATATTTAT
CAACGGGGAGTTCGTTGGGGGCTCTGACATCATATTAAGCATGCACCAGGCAAGTGAAC---------------------
-----------GGATCATCACTATTTCATTCAGCATGTGTATCCAGCTGGTATCTTTCACTTGGTGGTTGACTTATTCTC
--TAAATTTTCTTCAGAAAGGGGAACTTAAGGATTTACTTGGTGATTCCGCACAAAAGGGCGAGCAAGACAGTGCCCAGT
GA------------------------------------------------------------------------------
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>chr3A_1_TraesCS3A01G127900
GACATATTCCAAAGGAGAAGACAAAATGGCAGGCGCGTGAAGCGGACGTACTGAAGTTTAACATTGATGGTGCCCACATG
CCAGGAAGCTCTCAATCTGCGTGGG-AGTGATTGCACGTGACCTCAATGAAGATGCAGTAGCTTGCATGGCAGGAAGGAA
TGAGCATGTCCATGATGCTTTCGCAGCAGAACTACGAGCGGCTGAGGGCGAGATGGAGCTGGCCGCCCATCTTGGAGCGA
TCCGGATCTGCATCGAGACTGACTCACAGCTTCTCCA-GCGGCCCTCACGCGGAAGGAGCCAAACTTCTCAGCAAATGCC
TCGGCCCTGGACGTCCTGAAGATTCAAATGAGGCTATGATTCTCAAAGTGTGATGTTATTGCATGCAGGCGGGAAGCCAA
CGGTGCTGTGCACGAACTCGCTAAGTTAGGATACGAATGTAATGTGAATGAACCCACCATATGGGATATCAGTGTTCCGC
CGTCTGTGGCCGAACTTGTTTTAGGCGACATGCCTAGCCTGGTTGCGTAATAAAGCGTTTTTGCTTTGACCCTAAAAAAA
GTCATCAACCTGATGTCCCGTTAAAAAAAAAATCACCATCCTGATGAAGAGCTCGCGCGTGGCCGCGTGGCGATCGGACG
GCGCGGAGCACGTCGCGCCGTAAGGAGTTGCACCGCACGTTCGTGCGGTATATTCACCGAACAGCACATCCTGGTA----
--GATTGGAGTCGAACCGTCCGAGAAGGCAGTGCCCGCCGCCGCCGCCGCCCCCGCCCCCTCAATCCCCCTGCCCCGCCG
CCCAACTCCCTCCGCCTCTCGCGCGCGTCGCCGCCCACCGCGCCCCTGCCGTCTCGACCCCGTCCGCAATCTCTCTCCAC
TGGGTTTCGAGGTATGAGCTTTCGTTCATCCACCGATTAGTTAAACCCTACCGATCTCCCCAATTTCTGGGCGCATCTAG
ATCCGTCCCTGTTGCTAAATCGCGGTTGCCTGTCTGTTTTACCCGTCGATGCAGGGGAACATGGCGAGGCTGGTGTCGTC
TTCCCTCCTCAGGGGGCTCGCGCGGTCGTGCCGCGCGCCCAGCACGGCGGTAAGTGCCGGCACCTTCATCTG-TTCATAG
TTCTGAGCTTTTCCCGATTTATTTTCGCTCAACTGGTCCGAGCTCTGATCGAGCCCCAAAATCCCCAAATTGCTGTCAGG
TTCATTGGGACCTAGTAAGCTAATCGGTTCACTCGTTTACAGTTGCATAAATTTAATGTTACATTCATCTGTACC-----
---ATCTC--TCTATCACGAGATTGTTTGATAAGAGCTATCATGATGACCCTGGTTTTCACCTTTTTTTAAAGCATATCA
TGTCTAGAGATGAGACTCCGGTGGCCCCATATATTTTAACCAAAAATCCACATGTGTAGAGTTGAGCTCATTTCAGCATT
TGCCATGACCATTTGTGCTATAAGGCAGCCATTATTATGTCTGAATGGATGTTATGGATGCTATAGTTCTCTACCAAGTG
GTTTCCTGTAAACGTGTTCCATTTAAATGGGATGTTTATGCAACCTGTTTAATGCTGTACGCCTGCATGGAGAGTGCTTC
GGTGAGGCTGGAGCCACCTCCCGGCTCTGAGCCTTATAATGCTATAAACTGGTGGTTG-TTTGGTTTCATTTTAAATGGA
ACAGTGTCTATGAGATTTAAAGAAGGTTACATGGTTAGTTTCAGCTTAGACTTGCAATGTTATCACAGTTGAGGTTTTCT
CGTTAGCTTCTGGGCATCAA--------TTGTCCTTTTTGCTCTGTGCTTACACTATAGTATTTTCAAGCTTTATTTTGC
TTCCAGTTTATCAAAGAACCAACCAATGTTGCACTATCAGCTTTTGTCAAGCAAAATCAGATTGTTTCTGTTTTGATTTT
GATCTCATGTTTGCACAATGACCTTGTTTTG-CATGATAACTGGAAAAGCAGACCGTGTCACGACCAGCTTTCCAACAGT
TCATGAACTACTCATCAGGAATCAGTGGTGATTCTAACGTGAATGGCGGCACAAGTGCAACACGAGTAACCGCTGATACT
GATACACATCAAGATTTCCAGCCTACAAGCAAAGGTTCTGACATGTCTTTGCAAGACATCGTTGCTCAGGTATTTATATG
CACACATGAGCTTCAGAACATTTATATTCAATCTCTTGAAATGTAACAAAAATACGCATGGCATGAAAATTGTAAAGCTT
AATGTTGTGTCATATTCTTCTGCTGTTAATTAATTTCCTTGATGAAATCTTTGCCAGGATATCAAGGAGAATCCAGTCGT
TATCTTCATGAAGGGTTATCCTGAAGCTCCCAGGTGTGGATTTAGTGCACTGGCAGTTAAGGTCCTCCAGCAATATGGTA
AGCTATATCTCAGAACCAGCTCTCAGTCAATTGTGCCCCTGAAATCCCTAAATCATATCTTGTCTATTGCAGGCGTCTCT
ATCACTGCCAGAGATATTCTGAGTAATATGAAGCTCAAGGAGAGTGTCAAAGCTTACTCGTAAGTTGCTCGTCATAACCT
CCCTGATGTTGTACTTTCAGTTTTAGATGGAAGACAATTGTCTCAAAAAGGAAAAAAAAAAAAGGAACTAGCCATG----
----------------------GGAATAGGGTATGGGATGATGTGGTAAAGAAAATATTTTACTATGGGTTAAGATTTAG
CTTCAACAACAGATGATAAAACATACAGAATATGATTTTGATTTA-GC----TGGAGGCTTTACTTGGAACAGA-TTCGT
CGAAAACATGTTGTGTGCCCTTGATTACAACATTGGAGAGTTCTACTTAATGTTCAACTTTCAGAGTTCCAATTTTATTC
AGTTTCATTCATATGCATCATGGCGGAAATGACAAATGGATAATTTAACACCTGTTGCTAAGCTGCCGGGGTTTACAAAT
TATGTATCTCCTGATGGTATCATTATTAAAGCTACTGTTTGTTTGTGCAGTAACTGGCCTACCTTTCCGCAAATATTTAT
CAACGGGGAGTTCGTTGGGGGCTCTGACATCATATTAAGCATGCACCAGGCAAGTGAAC---------------------
-----------GGATCATCACTATTTCATTCAGCATGTGTATCCAGCTGGTATCTTTCACTTGGTGGTTGACTTATTCTC
--TAAATTTTCTTCAGAAAGGGGAACTTAAGGATTTACTTGGTGATTCCGCACAAAAGGGCGAGCAAGACAGTGCCCAGT
GAAACAAGCTACAGT-TGTTAGCATTTGCATGGAGATGGATGCTTCCTCTCTGAGTACTCTTTTACTCGACGCTCTTCCT
GCGGTGTTCTGTTGTTTTGACGCAGGATTTTCATCGTCGTGTTGCCAGCCATGATGGAAATCTCTCGGTTCCAAGAGCAT
CCAAGTTTTCGCTTCATGACAAATAAATGCCACTTTTTCAATACTCTGTTTTTTGTACGTTGTAATAGTCAGGTGATTTC
GTTTGGATTCTG--TACTTTGGGCTCCGTTTGCGTTGCAGTAATAAATGGTTAGGCTGTTACTTTGTACTTTTTTTTGAA
ACAAGTTACTTTGTACTTTAGGCTGCTTTTCTATTCCGCGAAGTTAATTTTGTTTGTGTAATCACCTGTTTCCACCGCGA
GCGCACCATCGATTCAAAGGCTTGTGGGGTAGTTATTTATGCTGCTTTTCTATTCTGCAAAGTTAATTTTGTTTGTATAA
TCATCCGTTTCCACCGTGAGCGTACCATCGATTCAAGGCTTGTGGTGTTGCATTGTCTGAATACAGAACTTACCTGTGTA
ATGCATCTTGCTTGTATAAACTTACAGCATAAAACCTGCCCAAATCGAAGAGCAAGGTAGTGACAACTATGTCAAGGGCG
GATTTTGGGTTGTTTGGAATAATCAAAACAGCCAGG---TGATAATTTTTAAAAATTCTAAAAGCAATTTAATTTTTGTA
AAAAGGCCCCTAGATCCATTATAAAGGATCATCAACAATACAAAGGACCCAAACAAACTAGAAATTATATTCCAGTCCAT
AGAGCACCAAACAAATTTATCCACCAAAACGAGCCGCCGCCACCGCGTCGCACTTGAAGCCGGCCACTCCGATCTACGGC
CCTGAAGGACCGGCGCACAGGTAGAGCCGCCGCCATTGTCGTCGTCGCCGTTGAATAAACCAGGATCACGAACCACGCCT
ACGCCTAGATCCAGCGATACGAAGACCGGCGCCCACACAACGCCTTGC
>chr4D_1
GACACACTCCGAAGTAGAAGACAAAATGGCAGGCGCCTGGAGTGGATGTACTGAAGTTTAACATTGATGGTGCCCACATG
CCAGGAAGCTCTCAATCTGCGTGGGGAGTGATCGCCCGGGACCTCAATGGAGACGCAGTAGCTTGCATGGCAGGAAGGAG
TGAGCACGTCCATGATGCTTTTGAAGCAGAACTATGAGCGGCGGAGGGTGCCGTGGAGCTGGCTGCCCATCTTGGGGCGA
TCCAGATCTGCATCGAGACTGATTCACATCTCCTCCAGGCGGCCCTCACGCAGAAGGACCCAAGCTTCTCAGCATATGCC
TCGGCCCTGGACGATCTGAAGATCCAGATGAGGCTATGATTCTCAAAGTGTGATGTTATTGCATGTAGGCGGGAAGCCAA
CGGTGCTGCGCACGAGCTCGCTAAGTTAGGATATGAATGTAGTGTGAATGAACCCACCATATGGGATGTCGATGTACCGG
CGTCTATGGCCGGACTTGTTTTAGGCGACATGCCTAACCTGGCTGCGTAATAAAGTG-TTTTGCTTTGACCCTAAAAAAA
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------------------------------------------------
>chr5B_10
---------CAAGGGAGAAGACCAGATGGCAGGCACCAGAAGCAGACGTACTGAAGTTTAACATTGATGGTGCCTACGTG
CCAGGAAGCTCACACTCTGCGTGGGGAGTGGTGGCCCGGGATCATACTGGAGATGTAGTAGCTTGCATGGCAGGGAGGAA
TGAGCATGTCCATGATGCATTCGCAGCTGAGCTACGAGCGGCCGAGGGCGTGGTGGAACTGGCTGCCCATCTTGGGGCGA
TCCGGATCAACATCGAAACTGATTCACAACTTCTCTAGGCGGCCCTTACCCAGAAGGAGCCTAGCTTTTCAGCGTATGCC
TCGGCCCTGGACGACCTGAAGATCCAAATGAGGCTATGGTTCTCCAAGTGTGATGTAATTGCATGCAGACAGGAGGCCAA
CGGTGCTGCGCATGAACTTTCTAAGCTAGGATATGCATGTAATGTGAATGAACCCATCATATGGGATGTCAATGTTCCAC
CGTCTGTGGCTGGAATTGTTTCAGGCGATATGCCTAACCTGGTTGCGTAATAAAGCG-TTTTGCTTTGACCCTCAAAAAA
A-------------------------------------------------------------------------------
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>chr3D_622
--------------------------------------------------------------------------------
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---------------------------------------------------------------CGCGTGGCGATCGAACG
GTGCGGAGCACGTCGCGCCGTAAGGAGTTGCACCGCACGTCCGTGCGGTATATTCACCGAACAGCACATCCTAGTACTCC
TAGATTGGAGTCGAACCGTCCGAGAAGGCAGTGCCCGCCGCC------GCCGCCGCCCCCTCAATCCCCCGGCCCCGCCC
CCCAACTCCCTCCGCCTCTCACGCGCGTCGCCGGCCACCGCGCCCCTGCTGTCTCCACCCCGTGCGCAATCTCTCTCCAC
TGGGTTTTGAGGTATGAGCTTTCGTTCATCCACCGATTAGTTGAACCCTACCGATCTCCCCAATTTCTGGGCGCATCTAG
ATCCGTCCCTGTTGCTAAATCGCGGTTGCCTG-CTGTTTTACCCGTCGGTGCAGGGGAACATGGCGAGGCTGGTGTCGTC
TTCCCTCGTCAGGGGGCTCGTGCGGTCGTGCCGCGCGCCCAGCACGGCGGTAAGTGCCGGCACCTTCATCAACTTCATAG
TTCAGAGCTTTTCCCCATTTGTTTTCGCTCAATTGGTCCGAGCTCTGATCGAGTCCTAAAATCCTCAAATTCCTGTGGTT
GG--TTGGGGCCTGGTAGGCTAATCGGTTCACTCGTCTAGAGTTATATG-AATTTATGTTATATTCATCTGTGCCATCTC
TCTAAGTGATTCTATCACGAGATTGTTTGATAAGAGCTATCATGATGACCCTGGTTTTCACTTTTTTTTAAAGCACATCA
TGTCTAGAGATGAGACTCCGGTGGCCCCATATATTTTAACCAAAAATCCACATGTGTAGAGTTGAGCTCATTTCAGCACT
TGCCATGACCATTTGTGCTATAAGGCAGCCATTATTATGTCTGAATGGATGTTATGGATGCTATAGTTCTCTACCAAGTG
GTTTCCTGTAAACGTGTTCCATTTAAATGGGATGTTTATGCAACCTGTTTAATGCTTTACGCCTGCATGGAGAGTGGTTT
GGTGAGGCTGGAGCCACATCCTGGCTCTAAACCTTATAATGCCATAGACTGGTGGTTGTTTTGGTTTCATTTTAGATGGA
ACAGTGGCTATGAGCTTTGAAGAAGGCTACATGGTTAGT-TTAGCTTAGACTTGCAATGTTATCACAGTTGAGGTTTTCT
ATTTAGCTTCTGGTCATCTA--------TTGTCCTTTTTGCTCTGTGCTTACATTATAGTATTTTCAAGCTTTATTTTGC
TTCCAATTTATCAAAGAACCAACCAATGTTGCACTATCAGCTTTTGGCAAGCAAA-TCAGATTGTTTCTATCGTTATTTT
GATCTCATGTTCGCACAATGACCTTGTTTTG-CATGATAACTGGAAAAGCAGACTGTGTCACGACCAACTTTCCAACAGT
TCATGACCTACTCATCAGGAATCAGTGGTGATTCTAACGCGAATGGGGGCACAAGTGCAACACGAGTAACTGCTGATACT
GATACACATCAAGATTTCCAGCCTACAAGCAAAGGTTCTGATATGTCTTTGCAAGACATTGTTGCTCAGGTATTTATATG
CACACATGAGCTTCAGATCATTTAGATTCAAGCACTTAAAATGTAACAAAAATACGCATCACATGAAAATTGTAAAGCTC
AATTTTGTGTCATATTCTTCAGCTGTTAATTAATTTCCTTGATGAAATCTTTGCCAGGATATCAAAGAGAATCCAGTCAT
TATCTTCATGAAGGGTTATCCTGAAGCTCCCAGGTGTGGATTCAGTGCACTGGCAGTTAAGGTCCTCCAGCAATATGGTA
AGCTATATCTCAGTACCAGCTGTCAGTCAATTGTGCCTCTGAAATCCCTAAATCATATCTTGTCTATTGCAGGCGTCTCT
ATCACTGCCAGAGATATTCTGAGTAATATGAAGCTCAAGGAGAGTGTCAAAGCTCACTCGTAAGTGGCTCGTCATAACCT
CCTTGATGATGTACTTTCAGTTTTAGATGGTAGACAATTGCCTCAAAAAGGG-----AAAAAAGGAACTAGCCATGTGTA
GCACTCGAGATTCTGCATCATGGGAATAGGGTATGAGATGGTGTGGTAAAGAAAATATTTTACTATGGGTTAAGATTTAG
CTTCAAG---AGATGAT-AAACATACAGAATATGATTTTGATTTAAGTTAGTTGGAGGCTTCGCTTGGAACAGATTTCGT
CCAAAACATGTTGTGTGCCCTTGAT--CAACATTGCAGAGTTCTACTTAATGTTCAACTTTCAGAGTTTCAATTTTATTC
AGTTTCATTCATATGCATCATGGCGCAAATGACAGATGTATAATTTAACACCTGTTGCTAAGCTGCCGGGACTTACAAAT
TCTGTATCTCCTGATGGTATCATTATTAAAGCTACTGTTTGTTTGTGCAGTAACTGGCCTACCTTTCCACAAATATTTAT
CAACGGAGAGTTCGTTGGGGGCTCTGACATCATATTAAGCATGCACCAGGCAAGTGAATGGATCATCACTATTATTATTA
TTTTTGACTGTGGATCATCACTATTTCATTCAGCATGTGTATCCAGCTGGTATCTTTCACTCGTTGGTTGACTTGTTCTC
TATAAATTTTCTGCAGAAAGGTGAACTTAAGGATTTACTTGGTGATTCCGCACAAAAGGGCGAGCAAGACAGTGCCCAGT
GAAACAAGCTACAGTATGTTAGCATTTGCATGGAGGTGGATGCTTCCTCTCTGAGTACTCTTTTACTCGACGCTCTTCCT
GTGGTGTTCTGTTGTTATGACGCAGGATTTTCATCATCGTGTTGCCAGCCATGATGGAAATCTCTCGGTTCCAAGAGCAT
CCAAGTTTTCGTTTCATGACAAATAAATGCCACTTTTTCAATACT--GTTTTTTGTACGTTGTAATAGTCAGGTGATTTC
GTTTGGATTCTATATATTTTGGGCCCCGTTTGCGTTGCAGTAATAAATGGTTAGGCTGTTAC------------------
--------------------------------------------------------------------------------
----------------------------GTAGTTATTTATGCTGCTTTTCTATTCTATGAAGTTAATTTTGTTTGTGTAA
TCATCCGATTCCACCGCGAAAGCACCATCGATTCAAGGCTTGTGGGGTTGCATTGTCTGAATTCAGAACTTACCTGTGTA
ATGCATCTTGCTCGTATAA---------------CCTGCCCAAATCGAAGAGCAAGGTAGTAACAATCCTCTCGAGGGCG
GATTTTGGGTTGTTTGAAATAATCAAAACAGATGTGCAATAATTTTTTTTTAAATTCTGAAAACAACTTTAATTTTTGTG
AAAAGGCCCCCAGATCCATTATAAAGGATCAACAACAATA----------------------------------------
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>chr3B_665
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--------------------------GTTGCACCGCACGTTCGTGCGGTATATTCACCGAACAGCACATCCTAG------
TAGATTGGAGTCGAACCGTCCGAGAAGGCAGTGCACGCCGCC------GCCGCCCCCTCCTCAATCCCCCGGCCCCGCCG
CCCAACTCCCTCCGCCTCTCACGCGCGTCGCCGCCCACCGCGCCCCTGCTGTCTCCACCCCGTCCGCAATCTCTCGCCAC
TGGGTTTCGAGGTATGAGCTTTCGTTCATCCACGGATTAGTTAAACCCTACCGATCTCCCTAATTTCTGGGCGCATCTAG
ATCCGTCCCTGTTGCTAAATCGCGGTTGCCTG-CTGTTTTGCCCGTCGATGCAGGGGAACATGGCGAGGCTGGTGTCGTC
TTCCCTCGTCAGGGGGCTCGTGCGGTCGTGCCGCGCGCCCAGCACGGCGGTAAGTGCCGGCACCTTCATCAG-TTCATAG
TTCTGAGATTTTCCCCATTTATTTTCGCTCAACTGCTCCGAGCTCTGATCGAGCCCTAAAATCCCCAAATTGCTGTCAGG
TTCATTGGGACCTAGTAAGCTAACCGGTTCACTCGTTTACAGTTACATAAATTTAATGTTACATTCATCTGTGCC-----
---AAGTGATTCTATCACGAGATTGTTTGATAAGAGCTATCATGATGACCCTGGTTTTCACCTTTTTTAAAAGCATATCA
TGTCTAGAGATGAGACTCTGGTGGCCCCATATATTTTAACCAAAAATCCACATGTGTAGAGTCAGCATCTGTC-------
-------ACCATTTGTGCTATAAGGCAGCCATTATTATGTCTAAATG---------GATGCTATAGTTCTCTACCAAGTG
GTTTCCTGTAAACGTGTTCCATTTAAATGGGATGTTTATGCAACCTGTTTAATGCTGTACGCCTGCATGGAGAGTGGTTC
GGTGAGGCTGGAGCCACATCCTGGCTCTGAACCTTATAATGCCATAGACTGGTGGTTGTTTTGGTTTCATTTTAGATGGA
ACAGTGGCTATGAGCTTTGAAGAAGGTTACATGGTTAGTTTTAGCTTAGACTTGCAATGTTATCACAGTTGAGGTTTTCT
CGTTAGCTTCTGGGCATCTATTGTCCATTTGTCCTTTTCGCTCTGTGCTTACACTAT-GTATTTTCAAGCTTTATTTTGC
TTCCAATTTATCAAAGAACCAACTAATGTTGCACTATGAGCTTTTGTCAAGCAAA-GCAGATTGTTTCTGTTGCGATTTT
GATCTCATGTTCACACAATGACCTTGTTTTTACATGATAATTGGAAAAGCAGACCGTGTCACGACCAGCTTTCCAACAGT
TCATGACCTACTCATCAGGAATCAGTGGTGATTCTAACGTGAATGGGGGCACAAGTGCAACACGAGTAACCGCTGATACT
GATACACATCAAGATTTCCAGCCTACAAGCAAAGGTTCTGACATGTCTTTGCAAGACATCGTTGCTCAGGTATTTATATG
CACACATGAGCTTCAGAACATTTAGATTCAAGCACTTGAAATATAACAAAAATACGCATGGCATGAAAATTGTAAAGCTT
AATGTTGTGTCATATTCTTCTGCTGTTAATTAATTTCCTTGATGAAATCTTTGGCAGGATATCAAGGAGAATCCAGTCAT
TATCTTCATGAAGGGTTATCCTGAAGCTCCCAGGTGTGGATTTAGTGCACTGGCTGTTAAGGTCCTCCAGCAATATGGTA
AGCTATATCTCAGAACCAGCTGTCAGTAAATTGTGCCTCTGAAATCCCTAAATCATATCTTGTCTGTTGCAGGCGTCTCT
ATCACTGCCAGAGATATTCTGACTAATATGAAGCTCAAGGAGAGTGTCAAAGCTTACTCGTAAGTGGCTCGTCATAACCT
CCCTGATGATGTACTTTCAGTTTTAGATGGAGGACAATTGTTTCAAAAAGGAGAAGG-AAAAAGGAACTAGCCATG----
----------------------GGAATAGGGTATGAGATGATGTGGTAAAGAAAATATTTTACTATGGGTTAAGATTTAG
CTTCAACAACAGATGAT-AAACATACAGAATATGATTTTGATTTA-GTTAGTTGGAGGCTTTACTTGGAACAGA-TTCGT
CGAAAACATGTTGTGTGCCCTTGATTACAACATTGCAGAGTTCTACTTAATGTTCAACTTTCAGAGTTCCAATTTTATTC
AGTTTCATTCATATGTATCATGGCGGAAATGACAAATGGATAATTTAACACCTGTTGCTAAGCTGCCGGGATTTACAAAT
TATGTATCTCCTGATGGTATCATTATTAAAGCTACTGTTTGTTTGTGCAGTAACTGGCCTACCTTTCCGCAAATATTTAT
CAACGGGGAGTTCGTTGGGGGCTCTGACATCATATTAAGCATGCACCAGGCAAGTGAAC---------------------
-----------CGATCATCACTATTTCGTTCAGCATGTGTATCCAGCTGGTATCTTTCACTTGGTGGTTGACTTGTTCTC
--CAAATTTTCTTCAGAAAGGGGAACTTAAGGGTTTACTTGGTGATTCCGCACAAAAGGGCGAGCAAGACAGTGCCCAGT
GAAACAAGCTACAGTATGTTAGCTTTTGCATCGAGATGGATGCTTCCTCTCTGAGTACACTTTAACTCGAAGCTCTTCAT
GTGGTGTTCTGTCGTTTTGGCGCGGGATTTTCATCATTGTGTTGCCAGCCATGATGGAAATCTCTCGGTTCCAAGAGCAT
CCAAGTTTCCGTTTCATGACAAATAAATGCCACTTT-TCAATACT--GTTTTTTGTACGTTGTAATAGTCAGGTGATTTT
GTTTGGATTCTATATACTTTGGGCTCCGTTTGCGTTGCAGTAATAAATGGTTAGGCTGTTACA-----------------
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-----------------------------TAGTTATTTATGCTGCTTTTCTATTCTGCGAAGTTAATTTTGTTTGTGTAA
TCATCCGTTTCCACTGCGAGCGCACCATCGATTCAAGGCTTGTGGGGTTGCATTATCTGAATTCAGAACTTACCTGTGTA
ATGCATCTTGCTCGTATAAACTTACAGCAT-AAACCTGCCCAAATCGAAGAAGGTAGTGGCGATTCC---GTCGAGGGCA
GATTTTGGGTTATTTGAAATAATCAAAACAG-------------------------------------------------
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>SNPs
----S-S-----------------------------S-------------------------------------------
--------------------------------S--S--S----------S------------------------------
------------------------------------------S-------S-S----------S-----------S----
----------------------S-----S----------------------S-----------S----------S-----
-------------S---------S--------------------------------------------------------
--------S------------------------S---------------------------------S---S--------
------------S-----------------------S--------------------S----------------------
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------S---
-S----------------------------------------------------------------------S-------
------------------------------------------SSSSSS---S------------------S---------
--------------------S----------------------------S-----S------------------------
--------------------------------------------------------------------------------
--------------------------------S-----------------------------------------------
-------S------------S-------------------------------------------------S---------
---------------S----------------------------------------S-----------------------
--------------------------------------------S---------------------------S-------
----SS-S------------------------------------------------------------------------
------------------------------------------------------------------------------S-
--------------------------------------------------------------------------------
----------------------------------------------------------------------------S---
-----------------S---S--------S-----------S---S---------------------------S-----
------S-------S---S----------------------S--------------------------------------
------------------S-------------------------------------------------------------
-----S-------------------------------------------------S----------------S-------
-----------S--------------------------------------------------------------------
------S---------------------------------------S---------------------------------
--------------------------------------------------------------------------------
------------------------S------S-S----------------------------------------------
------------------------------------------------------------------------------S-
--------------------------------------------------------------------------------
---------------------S---------------S------------------------------------------
-----------------------------------------------------------------S--------------
--------S-------------------------------------------S--SS-----------------------
-----------------------------------S--------------------------------------------
-----------------S-----------------------------S--------------------------------
-----------------------------------S--------------------------------------------
----------------------------------------------------------------------S---------
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--------------------------------------------------------------------------S-----
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-S---------------------------------S--------------------------------------------
-----------S---------------------------------SS---------------------------------
-----------S--------------------------------------------------SSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSS------------------------------S-----------------S---
----------------S-----S----------------------S----------------S-----------------
------------S-----------------S------------------------------------SS----S------
----------------S--------------SSSS-----S--SS-----S---S-SSS----SS-S------------S
----------S--------------------S--------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_617
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-------------------------------------ATCCTGATGAAGAGCTCGCG-----------------------
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>reverse_2546
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-----------------------------------------------------------------TGCTCGTCATAACCT
CCCTG---------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------
>forward_713
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------TCACCGAACAGCACATCCTG-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------
>reverse_2768
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------CTGGAGGCTTTACTTGGAACAG-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------
>forward_2438
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------GCTCTCAGTCAATTGTGCCC------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------
>reverse_3621
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------GGCTGCTTTTCTATTCCGCG----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------
