>input_sequence_36388
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--------------------------------------------------------------ATGGATATGGAGATGGAG
CTCGACGCCGCTCGCCACGGGTTCGCCAAGATGGGCTTCGGGTCCGTCCGCCTCTCCTTTCGCCCCTGCTACTTGTCTGT
ACTAC--------TATCCTTGGCTGGAGCAGTAGCTGA--------CCTCGGGGTGTGTGGTCGCAGGTGCAAGCACTAT
AGGAGGCGGTGCAGGATCCGGGCGCCCTGCTGCAACGACGTCTTCCACTGCCGCCATTGCCACAACGACTCCACGGTCTC
TGCTCTGCTCTGCTCTTCCTCTCTTCTCCTTGCTCTCTTCTCTGGTCTGCTTGGGTTGATGATGCTCACATTTCTTTCGT
TCTTTGGATAATCTCTGTCTTTCCAACTGCATCTTGTTCTT----CTTGGATCGGGCTTAGAAAGACGGGCACGAGCTCG
ACCGCCACGCAGTTGAATCGGTGCGCACTTCTCTCACTGCTTCCT----CCTCTTCATTTCTCATACTATCTATTATGTT
CCCAGTGCCCGGAAATCTTGTTTCTTGACTTCACCTT-CAGC-------TTTCTCGCTAACAAAACAACATTTCCTTTT-
T---------------CCGTAGGTTATATGTCTCGTCTGTGACACCGAGCAGCCGGTTAGCATCTGACGGCGATTCCCCA
C----TTTCTTCTTTCTTGTGCTGCTAATAGTCTAGTTTCAGAGTTTGGGTATAACACTAACAGTTTGGCACTGGTGGTG
ATCATCAGGTCGCGCAGGTGTGCAGCAACTGCGGCGTGTGCATGGGGGAGTACTTCTGCCGGGCGTGCAAATTCTTCGAC
GACGATGTGAGAATTGAGA------------------TCCCTGTCCCTGTGCCTGTGCTGGATTTGGATTTGGATTTGGT
GGTGATTGGGTTGTTGTTGATGGGATCTTGCTGCTGCTGTGCAGGTCGACAAGGAGCAATACCACTGCAAAGACTGCGGC
ATCTGCAGGTAGCTACT----CCTATCATATCTTCCGAACTGATGCTTAATTGAGAGACTGAGAGCACATGAAACCAGGC
CAAATTATGCAACATTGT--ACAAAATTCACAAATGAGTCTTCACTTTCATTCAGTTGTTGTACTTTGACACATCGCCCT
GAAAGTTCAAGATGCCGAGCTGACTAACTGAAACTGTGATACATGCATCTT----TTCCAACAGAGTTGGAGGCAAGGAC
AACTTCTTTCACTGCCACAAGTGCGGTAAGCAAGCATGATCCTTATTCCTTCCATGACACAGTCCGAATCACTCC-GATT
CACTCCGATTCCAACCATATATGTATCTCAATCCGCCGGGTACCGCCGCCGCAGGATCGTGCTACTCGGTGACCCTCCGG
GATAAGCATGTCTGCATCGAGGACTCGATGAAGAACAACTGCCCGATCTGCTACGAGTACCTGTTCGACTCCCTGAGGGA
GGCGTCGGTGCTGCGATGCGGCCACACCATGCACTTGCAGTGCTTCCACGAGATGCTCAAGCACGACAAGTAATCGCCCA
TGCCTTCCTATCG-------------------ACCCACACATCCCATCCCTTTCGTGTGATCTTGTTCTTCTTGCTTGGA
TAGATAGATAACGCTATCCTCCACGTATCTGCAGGTTCACTTGCCCCATGTGCTCCGTGTCCATCTTTGACATGGAGAAA
TTCCTGAGGGCCTTAGATGCCGAGGTAAGTATTTTCTCAGTAAGATCCGTAGCAAGCATGATTTTCATCTTGGTTCC---
-----------TTTTCTCTTCATGTTCTTGGCCCCGGCCTGAGATTTTTTTTTTGTATC----TCTTTTTGTCAGATTGA
GGCGAAGTTCTTACACATGGGAAAGGTCAGTGACACATTTGCAACTCACATATTTTTGTAGCCCTCAAATAAACATGTTT
CTTTGTGAAATTTTATAGGAACATAATAAGAATGCATATGTACTTGTGGAAAAGAGTACTGCATAATTTTTTCCGCAAAA
AAAGTACTGCATAATTTCTGGAAATTTGAAAATATACT-----TTTTCTTAAAAAAAAGGCTTCAACTGACTCAGACTCA
TTACCACTATTCT-TCTAGTAGTAG----CAAGTTATATAAATGTGATGGTTTTCTGATGCCATTACTAGTGGCGTGTGT
TTGTGGGTGGGTGCAGGGATGGATCGTGTGCAACCACTGCTGGGACACGACCCGGGTGTATCCGGGCATGACGGGACAGA
GAAAGTGTTGCCATTGCCAGTCCTACAACACCTGCAGGGTTGCTCCATCGGTGCTGCCGGCCTAG---------------
--------------------------------------------------------------------------------
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--
>chr4A_1_TraesCS4A01G249200
CGCCACTACTACGGTTACACTTACACAACCCAGCGTCATCAGTC----CAATTATTAGTACTCGTATACGCGAGCAGGCA
GGGCAG-CAAGGCGATCCGATCGACCAAAGAAAAGAAATCATGTTC----TGTACACCGATCATGATGGAGCGATCGGCG
GCGAAATGAATGAGTATGAAAAATCTCGGCTTCATGATCCACATCCACATGAATGAAATACTCTACTGCCCAGTGCTGCC
TGCAGCTGCGCCATCCCGAT----------CC--TGCCTGGTAAAGAAACAGGGAAGAAGGGGCGTCAGGTCGACCTTGA
CAGGACCGATCAACAAACCAACGTACA-TTTATGCTTGGGGATCTGCCCCCGGCGTCAGTCAAACTGATGAGATATACTG
TACGTACATTCAGAGGATTCGGGGCTTTCACGGGAAGCCGTCCGGGTCAGAGGTCTTCTTCCGCGCGC-----CTCCGGT
GAGCGGTGACGATAGAGTGTAATTCAGAGTGATGGGC-----TGACGCGTGCGCAGTGGAGTTAGAACGCAGTGACCCGC
CGGAGGAGTAAAGAATCGTCATCCCATCCCGAGTGCTTTCGGAGCTTCCATCTTTGGCCCGCCCGCACGCCACCACCTCC
TTCCCGTAACAA-AAAGCAACGCTGTTGATAATTGCTTACGAGTAT----------AAACAAGAGG--GAGAAAGAAAGA
TGCGCAAAGGCTCCCCTCCTGGATCTTGAATTCTTGATAAGTTAAAGAAATGGCAGTAGGTCTATCCATGTAGATCCTCT
GCGCTCCGGAAACTATACT-TCTTCAGTCATA---CTACAACTGTAGAGGAAGAAGAGAAGAGAGGGGTAGGC-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------AGGCACGCTAGACTGCAGTGACAGTATAAAAAT----GCTCTCCTCGCCCTC
CTA--------------AGCGAGCGCGGCAACAGGCAGCAACGGCAGTAGAAGGCTAGAAGCAGAGCAGAAGCCAGATCC
GAAGCCGCCGCCGCCGCCGCCGCCGCCTCCGTCGAGCCCGGACAAGAACAGCAATCTCGCCAATGGATATGGAGATGGAG
CTCGACGCCGCTCGCCACGGGTTCGCCAAGATGGGCTTCGGGTCCGTCCGCCTCTCCTTTCGCCCCTGCTACTTGTCTGT
ACTAC--------TATCCTTGGCTGGAGCAGTAGCTGA--------CCTCGGGGTGTGTGGTCGCAGGTGCAAGCACTAT
AGGAGGCGGTGCAGGATCCGGGCGCCCTGCTGCAACGACGTCTTCCACTGCCGCCATTGCCACAACGACTCCACGGTCTC
TGCTCTGCTCTGCTCTTCCTCTCTTCTCCTTGCTCTCTTCTCTGGTCTGCTTGGGTTGATGATGCTCACATTTCTTTCGT
TCTTTGGATAATCTCTGTCTTTCCAACTGCATCTTGTTCTT----CTTGGATCGGGCTTAGAAAGACGGGCACGAGCTCG
ACCGCCACGCAGTTGAATCGGTGCGCACTTCTCTCACTGCTTCCT----CCTCTTCATTTCTCATACTATCTATTATGTT
CCCAGTGCCCGGAAATCTTGTTTCTTGACTTCACCTT-CAGC-------TTTCTCGCTAACAAAACAACATTTCCTTTT-
T---------------CCGTAGGTTATATGTCTCGTCTGTGACACCGAGCAGCCGGTTAGCATCTGACGGCGATTCCCCA
C----TTTCTTCTTTCTTGTGCTGCTAATAGTCTAGTTTCAGAGTTTGGGTATAACACTAACAGTTTGGCACTGGTGGTG
ATCATCAGGTCGCGCAGGTGTGCAGCAACTGCGGCGTGTGCATGGGGGAGTACTTCTGCCGGGCGTGCAAATTCTTCGAC
GACGATGTGAGAATTGAGA------------------TCCCTGTCCCTGTGCCTGTGCTGGATTTGGATTTGGATTTGGT
GGTGATTGGGTTGTTGTTGATGGGATCTTGCTGCTGCTGTGCAGGTCGACAAGGAGCAATACCACTGCAAAGACTGCGGC
ATCTGCAGGTAGCTACT----CCTATCATATCTTCCGAACTGATGCTTAATTGAGAGACTGAGAGCACATGAAACCAGGC
CAAATTATGCAACATTGT--ACAAAATTCACAAATGAGTCTTCACTTTCATTCAGTTGTTGTACTTTGACACATCGCCCT
GAAAGTTCAAGATGCCGAGCTGACTAACTGAAACTGTGATACATGCATCTT----TTCCAACAGAGTTGGAGGCAAGGAC
AACTTCTTTCACTGCCACAAGTGCGGTAAGCAAGCATGATCCTTATTCCTTCCATGACACAGTCCGAATCACTCC-GATT
CACTCCGATTCCAACCATATATGTATCTCAATCCGCCGGGTACCGCCGCCGCAGGATCGTGCTACTCGGTGACCCTCCGG
GATAAGCATGTCTGCATCGAGGACTCGATGAAGAACAACTGCCCGATCTGCTACGAGTACCTGTTCGACTCCCTGAGGGA
GGCGTCGGTGCTGCGATGCGGCCACACCATGCACTTGCAGTGCTTCCACGAGATGCTCAAGCACGACAAGTAATCGCCCA
TGCCTTCCTATCG-------------------ACCCACACATCCCATCCCTTTCGTGTGATCTTGTTCTTCTTGCTTGGA
TAGATAGATAACGCTATCCTCCACGTATCTGCAGGTTCACTTGCCCCATGTGCTCCGTGTCCATCTTTGACATGGAGAAA
TTCCTGAGGGCCTTAGATGCCGAGGTAAGTATTTTCTCAGTAAGATCCGTAGCAAGCATGATTTTCATCTTGGTTCC---
-----------TTTTCTCTTCATGTTCTTGGCCCCGGCCTGAGATTTTTTTTTTGTATC----TCTTTTTGTCAGATTGA
GGCGAAGTTCTTACACATGGGAAAGGTCAGTGACACATTTGCAACTCACATATTTTTGTAGCCCTCAAATAAACATGTTT
CTTTGTGAAATTTTATAGGAACATAATAAGAATGCATATGTACTTGTGGAAAAGAGTACTGCATAATTTTTTCCGCAAAA
AAAGTACTGCATAATTTCTGGAAATTTGAAAATATACT-----TTTTCTTAAAAAAAAGGCTTCAACTGACTCAGACTCA
TTACCACTATTCT-TCTAGTAGTAG----CAAGTTATATAAATGTGATGGTTTTCTGATGCCATTACTAGTGGCGTGTGT
TTGTGGGTGGGTGCAGGGATGGATCGTGTGCAACCACTGCTGGGACACGACCCGGGTGTATCCGGGCATGACGGGACAGA
GAAAGTGTTGCCATTGCCAGTCCTACAACACCTGCAGGGTTGCTCCATCGGTGCTGCCGGCCTAGCAGCCACGATACCCG
CTTCGGTGAACGCTACGATTATTTAGTACTAGTTGCGATTGATGTATTATTTCCAGTTCAACATGAACTGTGCAGACTGC
AGAAACATTATTATACACGGTACCGATTTATATGTATGTACGGTGCCAATTTGTGAGAAAGAAAGATGAATGGAAAAACA
CCCGTCTCGTTGCAGTTTCTAGGGGAATTTGATGATATGTAAGTAAGTAAGTAAGATGTTGGGTT----------GTTGG
TTATCTTTTGAGAAAAGATCCCACAGAAACCGGTTTGTGAAAAATGATTGGTTTCATATCACACATTCGTCCCTATGCAT
GAATGTATTG---TACCTTGTAAATATTGATGTGAATGTAAAGCTTCTTATAATAGTTTATCCTTCCCGTCTGA------
--------------------------------------------------------------------------------
------AAAC-AATGAACCAAGGATAAGAGAAAGAGCG-----AAAAAGGAAAAGCTTGTTCCAAAATGGTCGGGCTGGA
GAAAGGCTATTATGGAATAACATGGAAATCATCACATCCTTCTCAAAGGACTTCTCCAATATCACTATGAGATGCAAAAC
CCGGAGGTTCTAGACATTTTGTATACAT-GAAAAAAAAATCCTTACTTGTCAAAGATAATGAAAATGACCAGTC------
--TAGTGTACCAACTACTATGGCAA--------CATATACTACATGGATGAGGGTAGAATCCCCCTTATGGTCT-ATCAA
ATTTGTACCTAGCTATCTAG-AAATGATAATTCACTAAGGATGAGGAATAAACATCACTATGTTGCTTGCTTGAGAATTT
GGTTCGT-------TGGTATCAAAGTGTTTGTCTCAACCACGAAGTTCAAAATATCCACTCGGAAGAAATAGGCTGTTAT
TAGAACTCATGATTCGTAAGTACTCCCTCCGTTCCTAAATATTTGTCTTTCTAGAGATTTCAAATGGTCACCACATACGG
ATGTATATAGACATATTTTAGAGTATAGATTCACTCATTTTGCTCCGTATGTAGTCACCATTTGAAACCTCTAAAAAGAC
AA
>chr4B_3
--CCACTACTACGGTTACACTTGCACGACCAGGCGTCATCAATCAATTCAATTATTAGCACTCGTA--CGCGAGCACGCA
AGGCAA-CAGGGCGATCCGATCGACCAAAGAAAAGAAATCACGTAC----TGTACGCCGATGATGATGGAGCGATCGGCG
GCGAAATGAACGACTATGAAAACTCTGGGCTTCATGATCCGCACGATTGAATGTTTTACTGCC------------CTGCC
TGCAGCTGCGCCGTCCTGAT----------CTGATTCCTGGTAAAGAAACACGAAAGAAGGGGCGTCGGGTCGACCTTGA
CAGGACCGATCAACAAACCAACCATGCGTTTATGCTCGGGGATCTGCCCCCGGCGTCGGTCAAACTGATGAGATATG---
-------ATTCAGAGGGTTCG-----------------------------------------------------------
---------------------------------GGGC-----TGACGCGTACGCTGTGGAGTTAGAATGCAGTGACCCGC
CGGAGGAGTAAAGAATCGTCATCTT-----GAGTGCTTTCGGAGCTTCCATCTTTCGCC---CCGCACGCCACCACCTCC
TTCCTGTAACAA-AAAGCAACGCCGTTGATAATTATAGTAGTATGTTCATTGAATAAAAAAAGGGGGAAAGAAAGCAAGA
AGCGCAAAGGCTCTCCTCCTGGATCTTGAATTCTTGATAAGTTAAAGAAATGGTAGTAGGTCTAG-CATCTAGATCCTCT
CAGCTCCGGAAACAAATAGCTCTTCAGTCATACTCCTACAACTGTAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG
AAGAAGAAGAGAGAGGAA-GTTGAGAAGGGAAAACAATTGCACCGAGCAACGAAGGCTCCCT-----------------C
CTTTTACAGCGCCTGTCTCTTCTCTCCT---TCTATGACCCAATCCCCAACTCGACCCCCGTTTCTTTCCATTCTCGGCA
ACGCACCCCACCACCACCAGACCAGAGTAGGCACAGTAGACAGCAGCGACAGTATAAAA-T----ACTCTCCTCACCCTC
CTCCTAGCGAGCGAGCAAGCG----CGGCAACAGGCAACAA-----------------AAGCAGAGGAGAAGCCAGATCC
GAAGCCGCCGCCGCC------ACCGCCTCCGTCGAGCCCGGACAAGAACAGCAATCCCGCCA------ATGGACATGGAG
CTCGACGCCGCTCGCCACGGGTTCGCCAAGATGGGCTTCGGGTTCGTCGGCCTCCCCTCTGT---CCGCTACTTGTCTGT
ACTAACCAACTAGTACCCTTGGCTGACGGGGAGACTGCTTCTTCGTCTTCGTCGTGTGTGCGCGCAGGTGCAAGCACTAC
AGGAGGCGGTGCAGGATCCGGGCGCCCTGCTGCAACGACGTCTTCCACTGCCGCCATTGCCACAACGACTCCACGGTCTC
TGCCCTGCTCTGCTCTGCCTCTCTTCTCTTTGCTCTCTCCTCTGGTCTGGTTGGGTTGGTGGTCCTCACAATTCTTTCGT
TCTTTGGATAATCTCTGCCTTTTCATCTGCATCTTCTTCTTCTTGCTTGGATTGGGCTTAGAAAGACGGGCACGAGCTCG
ACCGCCACGCAGTCGAATCGGTGCGCACTTCTCTCACTGCTTCCT----CCTCTTCATTTC------------TTATACT
CCC-----------ATCTTGTTTCTTCACTTCACCTT-CTTCAACTTGATTTCTCGCTAACAAAACAACATTTCCTCTCC
T---------------CCGTAGGTCATATGTCTCGTCTGTGACACCGAGCAGCCGGTTAGCATCTGATGGCGATTCCCTC
TCTAGTTTCTTCTTTCTTGTGCTGCTACTAGTTTCAGAGTTGAGTTTGGGTATAACAGATT--GATTG-----GTTGGTG
ATCGTCAGGTGGCGCAAGTGTGCAGCAACTGCGGCGTGTGCATGGGGGAGTACTTCTGCCGGGCGTGCAAATTCTTCGAC
GACGATGTGAGAATGAGATCCATCGTT------CCTGTCCCTGTCCCTGTCCCTGTGCCCGATTTA------GATTTGGT
GGTGATTGGGTTGTTGTTGATGGGATCTTGCTGCTGCTGTGCAGGTTGACAAGGAGCAATACCACTGCAAAGACTGCGGC
ATCTGCAGGTAGGTACT----CCTATCATATCCTCACAACTGATGCTTAATCGGGAGACTGAAAGCATACAAAACCAGGC
CAAATTATGCAAGATTATACACAAAATTCACAAATGAGTTTCCACTTCCATTCAGTTCTACT--TTTGACACATCGCCCT
GAAAGTTCAAGTTGCCGAGCTGACTAACTGAAACTGTGACACATGCATATCTATCTTCCAACAGAGTTGGAGGCAAGGAC
AACTTCTTCCACTGCCACAAGTGCGGTAAGCATTCAACATTCATGATCCTTTCATGACACAGTCCTAATTTCAA------
-----CGATTCCAACTGTATATGTATCTCAATTCGTCGGGTGCCGCCGCCGCAGGATCGTGCTACTCGGTGACCCTCCGG
GACAAGCATGTCTGCATCGAGGACTCGATGAAGAACAACTGCCCGATCTGCTACGAGTACCTGTTCGACTCCCTGAGGGA
GGCGTCGGTGCTGAGATGCGGCCACACCATGCACTTGCAGTGCTTCCACGACATGCTCAAGCACGACAAGTAATCGCCCA
TGCGGCCATGC----------------CCCCTGCCCACACATCCCATCCCTTTCGTGTGATCTTGTTCTTCTTGCTTG--
--GATAGATAACGCTATCCTCGACGTG-TTGCAGGTTCACTTGCCCCATGTGCTCCGTGTCCATCTTTGACATGGAAAAA
TTCTTGAGGGCCTTAGATGCCGAGGTGAGTATTTTCTCAGTAAGATCCACAGCATCGGCATGATCTCATCTTGGGTTCCT
TTTCGTGTGAATTTTCTCTTCGTGTTCTTGGCCCCGGCCTGAGATTTTTTTT--GTATC----TTTTTTTGTCAGATTGA
GGCGAGTTTCTTACACATGGGAAAGGTCAGTGGCAAATTTGCAACTG---------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------ACCCAGATTCA
TTTACTAAACTCTATAAATCCGATGAGACCCGGTTATATAAATCTGATGGTTTTCTGATGCCATTACTCCCGGCATGTGT
TTGTGGGTGGGTGCAGGGATGGATCGTGTGCAACGACTGCTGGGACACGACCCGAGTGTATCCGGGCATGGCGGGACAGA
GAAAGTGTTGCCATTGCCAGTCCTACAACACCTGCAGGGTTGCTCCATCGGTATTGCCGGCCTAGTACCCA---------
CTTCGGTGGCCACTACGATTATTTAGTACTAGCTGCGATTGATGTATTATTTCCAGTTCAACATGAACTGTGGAGACTGC
AGAAGCATTATTATATACGGTACCAATTTATATGTACGTACGGTGCCAATTTGCGAGAAAGAAAGATGGATGAAAAAACG
-CCCTCTCGTTGCAGTTTCTAGGGGAATTTGATTGATGATATA----TAAGAAAGATGTTGGGTTATTGGTCAAAGTTGG
TCATCTTTTGAGAAAAGATCCCATGGAAACTGGTTTGTGAAAAATGTTTGGTTTCATATCACACATCCGTCCCTATGCAT
GAATGTATTA---TACCTTGTAAATATTGATGTGAACGTAAAGCTTCTTATAATAGTTTGTCCTTCCCGTCATAAATCTT
CAAGAATTATGAGCCAAAAGAACCTATAATGGGTTGTTTTTAGTTGCAAAGAGTTATGTATACTGCACACATAGCTCACA
ATTATGAAAA-AATGAACCAAGGATAAGAGAAAGAGTGGGGAAAAAAAAGGAAAGCTTGTTCTAAAATGGTCGGGCTGGA
GAAAGGCTATTATGGAATAACATGGAAATCATCACATCCTTCTCAAAAGACTTCCGCAATATCACTACGAGATGCAAAAC
CTGGAGGTTCTAGACATTTGGTATACAGGGAAAAAAAAATCCTTACTTGTCAAAGATAATGAAAACGACGAGTCTCGCAC
TTTAGCGTACCAACTACCATGACAG--------CATATACTACATGGATGAGGGTAGAATCCCCCTTATGGTTC-ATCAA
ATTTGTACTTAGCTAGTTAGAAAATGATAATTCACTAAGGAAGATGAATAAACATCAC--TGTTTCTTGCTTGAGAATTT
GGTTTGT-------TGGTATCAAAGTGTTTGTCTCAACCATGAATAACAAAATATCCACTCTGAAGTAATAGGCTGTT--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--
>chr4D_66
---------------------------------------------------------------------GCGAGCAGGCA
AGGCAAACAAGGCGATCCGATCGACCAAAGAAAAGAAATCATGTACTTACTGTACACCGATGATGATGGAGCGATCGGCG
GCGAAATGAATGAATATGAAAACTCTGGGCTTCATGATCCACATGAATGAGTACTTTATTGC----------------CC
TGCAGCTGCAGGAGCTACGGCACCATGATCCTGATGCCTGGTAAAGAAACACGAAAGAAGGGGCGTCGGGTCGACCTTGA
CAGGACCGATCAACAAACCAACGTGCA-TTTATGCTCGGGGATCAGCCCCCGGCGTCAGTCAAACTGATGAGATATCC--
----TACATTCAGAGGATTCGGGGCTTTCACGGGAAGCCGTCTGGGTCAGAGGTCTTCTTCCGTGCGCATGCTCTCTGGT
GAATGGTGACGATAGATA-TAATTCAGAGTGAGGGGAGGGGTTGACGCGTACGCTGTGGAGTTAGAATGCAGTGACCCGC
CGGAGGAGTAAAGAATCGTCATCTT-----GAGTGCTTTGGGAGCTTCCATCTTTGG-C---CCGCACGCCACCACCTCC
TTCCTGTAACAACAAAGCAACGCTACTGATAATTATACTTGTATGTTTATTGAATAAAAAAAGGGG--AAGAAAGAAAGA
AGCGCAAAGGCTCTCCTCCTGGATCTTGAATTCTTGATAAGTTAAAGAAATGGCAGTAGATCCAG-TATCTAGATCCTCT
CAGCTCTGGAAACAATAGCCATGCAACTGTG------------------------------------GAACAAGAAGAAG
AAGAAGAGAAGAGAGGAAAGTTGAGAAGGGAAAACAATTGCGCCGAGCAAGGAAGGCTCTGCCTGCCAACAAGAGCCTCC
CTTTTACAGCGCCTGTCTCTTCTCTCCTCCTTCTATGACCCAATCCCCAACTCGACCCCCGTTTCTTTCCATTCTCGGCA
ACGCACACCACCACCACCACCAGAGTAGTCGTCTGC-------CAGTGACAGTATAAAA-TAGAGACTCTCCTCACCCTC
CTCGTAGCGAGCGAGCGAGCGAGCGCGGCAACAGGCAACAA-----------------GAGCAGAGGAGAAGCCAGATCC
GAA---------GCC------GCCGCCTCCGTCGAACCCGGACAAGAACAGCAATCTCGCCA------ATGGATATGGAG
CTCGACGCCGCTCGCCACGGGTTCGCCAAGATGGGCTTCGGGTCCGTCAGCCTCTCATCTGT---CTGCTGCTTGTCTGT
ACTATCCTTG-----CCCTTGGCTGGAGCAGTAGCTGA--------CTTCGTGGTGTGTGCTTGCAGGTGCAAGCACTAC
CGGAGGCGGTGCAGGATCCGGGCGCCTTGCTGCAACGACGTCTTCCACTGCCGCCATTGCCACAACTACTCCACGGTCTC
TGCTCTGCTCTGCTCCACCTCTCTTCTCTTTGCTCTCTTCTCTGGTCTGCTTGGGTTGGTGGTCCTCACGTTTCTTTATT
TCTTTGGATAATCTCTGCCTTTTCGTCTGCATCTTCTTCTTCTTGCTTGGATTGGGCTTAGAAAGACGGGCACGAGCTCG
ACCGCCACGCAGTTGAATCGGTGCGCACTTCTCTCACTGCTTCCTTCCTCCTCTTCATTTC------------TTATGTT
ACCAATGCCCGGATATCTTGTTTCTTTCTTGACTTCGCCTTCAACTTAATTTGTCGCTGACAAAACAACATTTTCCTTGA
TCAATTTCCTCTCCTCCCGTAGGTTATATGCCTCGTCTGCGACACCGAGCAGCCGGTTAGCATCTGACGGCGATTCCCTC
CCTAGTTTCTTCTTTCTTGTGCTGCTAACAGTTTAGTTTCAGAGTTTGGGTATAACACTAACAGATTG-----GGTGGTG
ATCATCAGGTGGCGCAAGTGTGCAGCAACTGCGGCGTGTGCATGGGGGAGTACTTCTGCCGGGCGTGCAAATTCTTCGAC
GACGATGTGAGAATGAGATCCATCGTCCCTGTCCCTGTCCCTGTCCCTGTCCCTGTGCTGGATTTG------GATTTGGT
GGTGATTGGGTTGTTGCTGACAGGATCTTGCTGCTGCTGTGCAGGTCGACAAGGAGCAATACCACTGCAAAGACTGCGGC
ATCTGCAGGTAGGTCGTCCTGCCTATCATATGCTGAC-------------------------------------------
-------------------------------------------------------------------------TCTCGCT
TCCACTTTCAGTTGCCGAGCTGACT----GAAACTGTGAT------------------CAACAGAGTTGGAGGGAAGGAC
AACTTCTTCCACTGCAAGAAGTGCGGTAAG-----------CATGATCTTTTCATGATACAGTCCTAATTTTGATAGACT
CACTCCAATTCAAACTATGGATGTATC------CGTCGGGTGCCGCCGCCGCAGGATCGTGCTACTCGGTGACCCTCCGG
GACAAGCATGTCTGCATCGAGGGCTCAATGAAGAACAACTGCCCGATCTGCTACGAGTACCTGTTCGACTCCCTGAGGGA
GTCGTCGGTGCTGAGATGCGGCCACACCATGCACCTGCAGTGCTTCCACGAGATGCTCAAGCACGACAAGTAATTGCCCA
TGCCTTTCTATCCATCTCCCCTCCCCTCCCCTACCCACACATGCCATTCCTTGCGTGTGATCTTGTTTTTCTTTCT----
----TAGATAACGCTATCCTCGACGTATTTGCAGGTTCACTTGCCCCATGTGTTCTGTGTCCATCTTTGACATGGAAAAA
TTCTTGAGGGCCTTAGATGCTGAGGTAGGTATTTCCTCAGTAAGATCCACAGCAAC-----GATCTCATCTTGGGTTCCT
TTTCGTGTGAATTTTCCCTTCACGTTCTTGGCCCCGGCCTGAGAAATTTTTTTTGTTATCTTTTTTTTTTGTCAGATTGA
GGCCAAGTTCTTACACATGGGAAAGGTCAGTGCCACATTTGCAACTCACATATTTATGA---------------------
--------------------------------------------------------------------------------
------------AAATTTTGAAACTTTAAAAATATACTTTCGATTTTCTTAAGAAAAGGGCTCCGACTAACCCAGACTCA
TCTACCAATATTCGTCTAGTAGTAG----CCAGTTATATAAATCTGATGGCTTTCTGA------------TGGCATGTGT
TTGTTGGTCGGTGCAGGGATGGATCGTGTGCAACGACTGCTGGGACACGACCCGAGTGTATCCGGGCATGGCCGGACAGA
GAAAGTGTTGCCATTGCCAGTCCTACAACACCTGCAGGGTCGCTCCATCGGTGCTACCGGCCTAGTAGCCATGATACCCG
CTTCGGTGAACACTACGATTGTTTAGTACTAGCTGCCATTGATGTATTATTTGCAGTTCAACATGAACTGTGCAGGCTGC
AGAAGCATC---ATATACGGTACCGATTTATATGTACGTACGGTGCCAATTTGCGAGAAAGAAAGATGAATGGAAAAACG
-CCGTCTCGTTGCAGTTTCTAGGGGAATTTGATTGATGATATAGAAGTATATTGTT-----GGTTGTTGGTCAAAGTTGG
TCATCTTTTGAGAAAAGATCCCCCAGAAACTGGTTTGTGAAAAATGATTGGTTTCATATCACACATTCGTCCCTATGCAT
GAATGTATTGTACTACCTTGTAAATATTGATGTGAATGTAAAGCTTCTTATAATAGTTTGTCCTTCCCGTCAAAAATCTC
CAAGAATTATGAGCCAAAAGAACCTATAATGGGTTGTTTTTAGTTGCAAAGAATTATGTATGCTGCACACATAGCTCACA
ATTATGAAAACAATGAACCAAGGATAAGAGAAAGAGCGGAAAAAAAAAAGGAAAGCTTGTTGTAAAACGGTCGGGCTGGA
GAAAGGCTATTATGGAATAACATGGAAATCATCACATCCTTCTCAAAAGACTTCCCCGATATCACTATGAGATGCAAGAC
CCGGACGGTTTAGACATTTAGTATACAGGAAAAGAAATGTCCTTACTTGTCAAAGATAATGAAAATGACCTGTCCCGCAC
TTTAGTGTACCAACTACTATGACAAGTTGACAACATATACTGCATGGATGAGGGTAGAATCCCCCTTATGGTCTAATCAA
ATTTGTACCTAGCTATCTAGAAAATGATAATTCACTAAGGAGGAGGAATAAACATCACTATGTTGCTTGCTTGAGAATTT
GGTTCGCTGATCGCTGGTATCAAAGTGTTTGTCTCAACCATGAATATCAAAATATCCACTCTGAAGTAATAGGCTGTTGT
TCGAACTCATGATGTGTAAGTA----------------------------------------------------------
--------------------------------------------------------------------------------
--
>SNPs
SS--------------------S---S---SS---------S----------------S-------SS------------
S----S--------------------------------------S----------------S------------------
-------------S--------S---S-----------------SS-SSS-S--SSS--SSS-SSSSSSSSSSSS-----
----------------S--------------S-------------------S-S-------------S------------
------------------------S-----------S---------------------------------------S-SS
SSSS--------------------------------------S--------------------S------------S---
--SS------------SSS-------------S-----------------S---S------------S------------
-----------------------SSSSSSS-----------------------------SSS------------------
----S-----------------------------SSSSSS-SS-S--------------S---S----S-----------
S------------S--------------------------------------------------SS---S----------
SS-----------S---SS-----------------------------S--------SS-SSS--SS-S--SS-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------S-----------------S-----S--------S-----
--S----------------------------------S---SSSSSSSSSSSSSSSSS--------S-------------
---------------SSSSSS-----------------------------------------SSSSSS-----S------
------------------------------------------------S---------S-SSSSS---------------
----S----------S-------------------------------S---S--------S------------------S
--------------------------------------------------------------------------------
----------------S-----------S-----------------------------S--S-S----------------
-----------------S----S--S---------S----------------S---------------------------
-------------------------------------------------------------SSSSSSSSSSSS-------
----S--------S------------S------------SS-------------------------------------S-
------------------------------------------------------------------------------SS
--------------------------------S-------------------------------S---SSSSS-------
----------S-----S---------------------------------------------------------------
--------------SSSSS-------------------------------S---------------SSSSSS--------
--------------------------------------------------------------------------------
------------S-------------------S--SS--------------S-S--------S----S-SS---------
------------S---S----------------------S-S-----S---------S-SS-SS----------------
-----------S------------------------------------S-S-----------------------------
--------S-----------------------SS--SS--S-S-SS-----S-------------S---SS-SSS---S-
---------------S----------------S--S-----S--------------------------------------
--S-----------------------------------------------------------------------------
-------------S------------------------------------------------------------------
------------S-----------------------------------------------------------------SS
SS-------------------S------S-----------------------------------------------S---
---S--------------------------------------------SS-----SSSSSSSS-SSSSSS-S-SSSS---
----------------------------------------------------------------S---------------
--------------------------------S----------------------S--SSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSS--S--S--S--S---S------------------------S----S----S-S---S--S--------
--SS-SSS-S--------------------S------------S------------------------SS----S-----
----------------------------------S-------------------S---------------S---------
-----------------------------------------------------------------S-----S--------
-----------S--------------------S-----------------------------------------------
----S----------S--------------------S----------------S-------------------------S
S--------------------------------SSSSSS--SSS------------------------------------
-S----------------------------S-------------------------------------------------
-----------------------------------------------------------S-----------SS-------
--------------------------------------------------------------------------------
---------S--------------------------------------S-S-----------S-----------------
-----------------------------------------------S------S-------------------------
-------------------S-------S----------------------------------------------------
---------------------S----------------------------------------------------------
-----------------------------------------S--------------------------------------
----------------------------------------S---SS---------------S----S-----------S-
-S-----------SS-------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SS
>forward_1177
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------GCAACGGCAGTAGAAGGCTA-----------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--
>reverse_2383
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------ACTTTGACACATCGCCCT
GA------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--
>forward_1267
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------ACAGCAATCTCGCCAATGGA-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--
>reverse_2526
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------TTCCTTCCATGACACAGTCCG--------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--
>forward_2149
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------TGCCTGTGCTGGATTTGGAT-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--
>reverse_4143
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------CAAAATGGTCGGGCTGGA
GA------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--
