>input_sequence_36358
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--------------------------------------------------ATGGCGCTCCGGCTCCACTCTGCCCTCTCC
GCCGCCGCCTCCGGACGCCTCTTCTGCCACCGGGCTCTC-----------------------------------------
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-----------------------TCCGCGGAGGCCACCTCGCGCCCTCAGTGGG-----------------GTGTGATCG
CCGGCACGCGTCCGGTCAAGTCGCCGGCGCTCGGTGCGACCTTCCACCTCGCCGAGCCCCCGCGCGCCTCCCGCCTCCTC
GTCCCCGACCACCTCCTCGGGTCGGGGCCACTCCCGGGCGTCGACAGAGGAATCATGGGCGCGCTCTTCTGCGACGTCCG
CACCGTGAGCGCCGACGGCTTCCTCCTCC---TCAACTTCCTCGACGTCCGCACCACGGGCCCCGTCCTCGAGAGTCAGC
GCGCTGACCCATTTCGGGACGCGACCCTTTCAGCGCTCCCCGAGGCCACGCGGTTCGTCTGCAACCCTCTCAGCGGCGAC
CTGTTCCGCCTGCCGGACATCGACGGCACCAATAAGACCCTGTGCGACAACCGCCTCGGCCTCCTCACCAAGGCCCTGCG
CGGTCACGGCCCGCCCGACAGGTACGCCGTCGCCGAGCTCCTACAGGAAAAGGAGCCCTCGAGGCGCTTCTCCATGAGGC
GGTTCCTCTCCGAGACAGGGGAGTGGGAGAAGCTCACGGGCCTGCCGTCCCCGCTCCCACTCCCGCTGGCGCGTCGGATG
GAGGTGGACCACGAGGCCGTGGCCTTCGGCGGCCGGCTCTGGTGGGTCGATGTGAGCTGTGGTGCCGTCTCCGCGGACCC
GTTCAGCGACCGGCCCGAGCTCCGCTTCGTGGAGCTCCCGGAGGGCAAGGAGCGAGTGGCCCCTGATCCCCGGACCCTGT
GCAGATACCGGCGCGTTGGGGTCAGCGAGGGGAGGCTGCGTTACGCCGTGGTGTCCCAGTGGGAGCCCTTCCTTCTCCGC
TCGTTTGCCCTTGATGGCGACGACGATTGGACACTGGAGCACGAGGTGGCGCTTAGCCCACTCTGGACGAACGGGGGCTA
CCCCTGGCTGCCTATGGAGGAGACACCGCGGATTGCCGTCATCGACCCCATGAACGCGAGCATCATGCATCTCACCATCG
GCAACTATGTTGTCACCGTGGACATGGACACGGGGAAGGTGGTTGCTAGTGTAATTGTCTCGGCGGAGCATCAGCTTGAT
CTAATCATGACCGATGGT---TTCTTTCGGGCTTTTGTGCTCTCGCCGTGGCTTGGATCAAACAGGATTCCTCGTGCAGG
TAATCGACTTGTGCATGACTCATTCTTCTGAAATGCAAAAGTTGTTTAGCATATAAATAGTAGAATAAG-----------
--------------------------------------------------------------------------------
--------------TAAGATCTAATGAAAGTTGTATGTTAAATACTTAATCGTAATGTGTGCACTAAAATTCAGAGAGGC
ATTTGACATGCACATGCTAAGTACAATACTCAGCTATTAAGCCATAAAGGACACAATTTGTTAATCGATTGGGATTTAGA
AATACACGAAGAGTTTGATTTGCCTTGGCGAAAGATTGTGTGAACCTCCCAAAA-TGATTTATTGGGAATTAGGTGTGAA
ACTGTAATCATGCTTTTGAACTTTGTGTTCGAACGTGAGAATGGTTAAATATGAAGTTACGTTCTAATTCAATCAAACAA
TGTTGTTGGCTTCGCAAGGATAGGATTAGTTGACTGGTGTGAGAATAAGAAGTAAGGGAAGCGTGCGTTTGACCCATATC
CACAATGAATTATTAT-------TTTCTGCTTCAAACTAGCAAAGCTCCCAATTTGTTGACTTGCTGCAAGCTAAAACAT
TTCCAGTCTAAAGCATGGTA--------ATCTGCCAAATTTCAAAGTTACCGATATATGTTGTACATTTTTTCATCTTTT
TGTCAGACAGTTTTAGGTTAAGGATGTTGTAGCCTTTTAATCATTCCTCTATACTTCCTTTGTTTCATGGACTACTCA--
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---------------------------------------------AGTATACTGTTGTCCCAAAAAAAAGTTTGACCGCT
CTAACTAGCGTATGCTGTGAT------------------GATCTACTGGAAAACGTAAATTCTTCATTTGTTTCGGAAGG
AAAAACTCAGTTCTTAACTTTAGTGCACAGAAAACTCAGTGTTATACTCCCTCCGTCCTAGTTCTTTTGCGTTAGTATTG
TGGGCTGATGCTATCGTTTAAGTTT---TTTCAAACGTTTATGACGAAAAAGAGCTATTTTCAGGCAAGCTGGGCAATGC
CAGGAACAAGACTCTGGCAGACGTTCTGATTCGCTCAAACTGA-------------------------------------
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>chr1D_1_TraesCS1D01G157700
GTGCTCGCAGCCACCGAACGCCCAACGGGGAAGATGC-TGAACTCCCCTCAAGCCGCGTACTCCAAGCCGTCGTGATCTT
TTCGAGTTGCCTTTGCGCACAACCGCATCTGATTTTTCCCTCTCTGCCTTCACATGGTCTTTTCTCTGCCAACACAACCA
GCACAAACAGTAAAAGAATCTCTTGTCACCTAGAGACGCAATGCGGCAGGAACGGGTGGCACGATTGATGACACCTGGAC
CAAGGCGTGCAAGACGTGGTTAACACCGGTTGACTAGTGGGGAAAGGAGCAAAACAAACTCCAGATTGACGTGGACTCGC
AAAATCATTGCCCTGAATCAACTCGTATCCCTCCACCACGCAGCCACATGCCAATGGT-CCACCCATCAGCAGATTACTT
CACAAATCACAACGCGTTGCCCAAATCAAAATCATAGACCAAATCTCAAATCGAAGACCTCAGTTGATTAAGAGAGCTTC
CACCCCTAGGGAGGTCATCGTGAATTAAACGATTTGGTGTTACAAGTAGTATCAGTTAGAAACCTTTTAGCTATTGAGCA
TAATTGTAAAACATGAGAGTATTCTCCTGTCAATTCTCATCATTGATCATTCGGTAGAGCCCGGCCAGAAAGAACATCCC
AAAACGAAGTTGAAAAGCTGAAGCCACCAGGAGGCATTTCAAACGTTCAAATTTCACCAGTCCTCGCGCGTTACCGATAC
TTTCCGCTGCAGCCCTCCTGCGCTTCCTACTGCCC------TACTCCTACAGGCGTCCCTTCTTGGAAGAGAGAGAAAGA
GGCCAGTCCCCTTGTTTCTGTGGACCAACTCCAGTAGACCGTCTTGGCTGACGCGGCGGCCTATGGGGAACTCGATACAC
AGCACCCGGTGGACCAACCCCACCAAGCTCTTCTAACAAAACGTCAAAACCGACTCCTCGTTCGG--AAAAAACTCCTCA
TTCCGCTCCGCTAGTCCAGTGTCCATCCAGTCCACAGCACACCGCCCGCGATGGCGCTCCGGCTCCACTCTGCCCTCTCC
GCCGCCGCCTCCGGACGCCTCTTCTGCCACCGGGCTCTC-----------------------------------------
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-----------------------TCCGCGGAGGCCACCTCGCGCCCTCAGTGGG-----------------GTGTGATCG
CCGGCACGCGTCCGGTCAAGTCGCCGGCGCTCGGTGCGACCTTCCACCTCGCCGAGCCCCCGCGCGCCTCCCGCCTCCTC
GTCCCCGACCACCTCCTCGGGTCGGGGCCACTCCCGGGCGTCGACAGAGGAATCATGGGCGCGCTCTTCTGCGACGTCCG
CACCGTGAGCGCCGACGGCTTCCTCCTCC---TCAACTTCCTCGACGTCCGCACCACGGGCCCCGTCCTCGAGAGTCAGC
GCGCTGACCCATTTCGGGACGCGACCCTTTCAGCGCTCCCCGAGGCCACGCGGTTCGTCTGCAACCCTCTCAGCGGCGAC
CTGTTCCGCCTGCCGGACATCGACGGCACCAATAAGACCCTGTGCGACAACCGCCTCGGCCTCCTCACCAAGGCCCTGCG
CGGTCACGGCCCGCCCGACAGGTACGCCGTCGCCGAGCTCCTACAGGAAAAGGAGCCCTCGAGGCGCTTCTCCATGAGGC
GGTTCCTCTCCGAGACAGGGGAGTGGGAGAAGCTCACGGGCCTGCCGTCCCCGCTCCCACTCCCGCTGGCGCGTCGGATG
GAGGTGGACCACGAGGCCGTGGCCTTCGGCGGCCGGCTCTGGTGGGTCGATGTGAGCTGTGGTGCCGTCTCCGCGGACCC
GTTCAGCGACCGGCCCGAGCTCCGCTTCGTGGAGCTCCCGGAGGGCAAGGAGCGAGTGGCCCCTGATCCCCGGACCCTGT
GCAGATACCGGCGCGTTGGGGTCAGCGAGGGGAGGCTGCGTTACGCCGTGGTGTCCCAGTGGGAGCCCTTCCTTCTCCGC
TCGTTTGCCCTTGATGGCGACGACGATTGGACACTGGAGCACGAGGTGGCGCTTAGCCCACTCTGGACGAACGGGGGCTA
CCCCTGGCTGCCTATGGAGGAGACACCGCGGATTGCCGTCATCGACCCCATGAACGCGAGCATCATGCATCTCACCATCG
GCAACTATGTTGTCACCGTGGACATGGACACGGGGAAGGTGGTTGCTAGTGTAATTGTCTCGGCGGAGCATCAGCTTGAT
CTAATCATGACCGATGGT---TTCTTTCGGGCTTTTGTGCTCTCGCCGTGGCTTGGATCAAACAGGATTCCTCGTGCAGG
TAATCGACTTGTGCATGACTCATTCTTCTGAAATGCAAAAGTTGTTTAGCATATAAATAGTAGAATAAG-----------
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--------------TAAGATCTAATGAAAGTTGTATGTTAAATACTTAATCGTAATGTGTGCACTAAAATTCAGAGAGGC
ATTTGACATGCACATGCTAAGTACAATACTCAGCTATTAAGCCATAAAGGACACAATTTGTTAATCGATTGGGATTTAGA
AATACACGAAGAGTTTGATTTGCCTTGGCGAAAGATTGTGTGAACCTCCCAAAA-TGATTTATTGGGAATTAGGTGTGAA
ACTGTAATCATGCTTTTGAACTTTGTGTTCGAACGTGAGAATGGTTAAATATGAAGTTACGTTCTAATTCAATCAAACAA
TGTTGTTGGCTTCGCAAGGATAGGATTAGTTGACTGGTGTGAGAATAAGAAGTAAGGGAAGCGTGCGTTTGACCCATATC
CACAATGAATTATTAT-------TTTCTGCTTCAAACTAGCAAAGCTCCCAATTTGTTGACTTGCTGCAAGCTAAAACAT
TTCCAGTCTAAAGCATGGTA--------ATCTGCCAAATTTCAAAGTTACCGATATATGTTGTACATTTTTTCATCTTTT
TGTCAGACAGTTTTAGGTTAAGGATGTTGTAGCCTTTTAATCATTCCTCTATACTTCCTTTGTTTCATGGACTACTCA--
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---------------------------------------------AGTATACTGTTGTCCCAAAAAAAAGTTTGACCGCT
CTAACTAGCGTATGCTGTGAT------------------GATCTACTGGAAAACGTAAATTCTTCATTTGTTTCGGAAGG
AAAAACTCAGTTCTTAACTTTAGTGCACAGAAAACTCAGTGTTATACTCCCTCCGTCCTAGTTCTTTTGCGTTAGTATTG
TGGGCTGATGCTATCGTTTAAGTTT---TTTCAAACGTTTATGACGAAAAAGAGCTATTTTCAGGCAAGCTGGGCAATGC
CAGGAACAAGACTCTGGCAGACGTTCTGATTCGCTCAAACTGATACTAGAGCAGATGAAGCATGCAAGGTAACCAGCCAA
TATATATCTGTTGATACTTTCTCATATCTAATGCTTCTATGGCATCATGAGGATACTGCGTTCCTTTCTACCCATCCAGC
GTGTATACATATCTGTGCTCCTGCTAGGTATTCTTGTTGTGTGTTCAGACTTCTGAGAATCTGTAGGGGAGTTGTTGATC
TGGATAAAACAGATCAGGGGTGCTGGACAGCGCTAGTTTAGATTGTTGCTGCTGCTGCTCTTTCCTGGCCCCTTTGGCGT
ACCA-AAACGATTTGAAATTTTGAAGCTACCAAGCTAATCCATCATCTGGCTGATGCAGTTCGTCAATTTGCAGCAACGG
CGCGCGTTTTGGAGTTAGATGCAACAGGAGGCGTTCAAGATCCTCTTCGGCGGGATTCAACCTATCATCATCAGGGGG-G
CCAGTGGAGTTTGGGGAG---TTCTTAGCTTCGATCAAGACTCTTGCCTTTCCAAATTTTATTTTGCTTTGTATGGCTAT
CTTGTAAACAGGGCCAAACCTGAAACCTGACAACTTTTGAATGGAAGCTGCGCGATAAACCTTTTCTCTAAAAGCGTTAT
GCATATTTTACCAATTATATACTACTCCCTCCGTTCCAAAATAAATGTCGTGGCTTTAGTTGTTAATACCGGTTCCTAGA
TATTGATTATAAAATACTCCATCTATTCACTATTATAAGATGTACCAACTTTTTTTTCTAAATTGAATGCATGTAAACAT
GTTTTAGTGTGTTTGTTTACCAATTTCAGTCTGTATGTAGTCCATATTAAAATATTTGAAATATCTTATAATAGTGAAAG
GAGGGAGTAGTATACTGAGAGCAATACGTTATGTATTTGTTGTGGTTACATCAAATCCAACCCAGGAGTCCTGCCTAATC
AAATTTAGCAACATTATCAAGGTCAGGGCAAGTCAAAGAAGAAAGAAGATAAAAAGAGGAAGTCAAAGATGAAGGCACAT
GAAGAAAG
>chr1A_1
GTGCTCGCATCCACCGAACGCCCAACCGGGAAAGATGTTGAACTCCCGTCAAACCGCCTACTCCAAGCCGTCGTGATCTT
CTCAAGTTGCCTCTGCGCACAACTGCATCTGATTTTTCCCTCTCCGCCTTCGCATGGTCTTTTCTCTGCCAACACAATCA
GCATAAACAATAAAAGAATCTCTTGTCACCTAGAGACGCAATGTGGCAGGTACAGGTGGCACGATTGATGACACCTGGGC
CAATGCGTGCAAGACGTGGTTAACACCGGTTGACCAGTGGAGAAAGGAGCAAAACAAACTCCAGATTGACGTGGACTCTC
AAAATCATTGCCCTGAATCGACTCGTATCCCTCCACCATGCAGCCACATGGCAACGGGCCCACCCATCAGCAGATTACTT
CACAAATCACAACGCATTA-CCAAATCAAAATCATGGACCAAATCTCAAATCGGAGACCTG---------AGAGAGCTTC
CACCCCCATGGAGGTCATCGTGAATTAAACGATTTGGTGTTACAAGTATT---AGTTAGAAACTTTTTAGCTATTGAGCA
TAATTGTAAAACATGAGAGTATTCTCCTGTCAATTCTCATCATTGATCAT-CGGTAGAGCCCGGCTAGAAAGAACATCCC
AAAATAAAGTTCAAAAGCTGAAGCCACCAGGAGGCATTTCAAACGTTCAAATTTCACCAGTCCTCGCGCGTTACCGATAC
TTTCCGCTGCAGTCCTCCTGCGCTTCTTACTGCCCTACTCCTACTCCTACAGGCGTCCCTTCTTGGAAGAGAGAGAAAGA
GATCAGTCCCCTTGTTTCTGTGGACCAACTCCAGTAGACCGTCCTAGCTGACGCGGCGGCCTATGAGGAACTCGATACAC
AGCACCCGGTGGACCAACCCCACCAAGCTCTTCTAAAAAAACGTCAAAACCAACTCCTCGTTCCAAAAAAAAACTCCTCA
TTCCGCTCCGCTAGTCCAGTGTCCA----GTCCACAGCACACCACCCGCGATGGCGCTCCGGCTCCGCTCTGCCCTCTCC
GCCGCCGCCTCCGGACGCCCCCTCCGCCACCGGGCTCTCTCCGCTGTTGGGACAAACCTGGTCCGGCAACGAACGCCGAA
TAGCCTCCAGCGATACGACCGCCGGACGAACCTTTTATTGTCTCTCTTGCTCAAACGGAGATAGAAGAAGTGCTAGACAT
AGATTTTCAGATGACGTACGCCTCGCCGCACGAACGGCGCCACGCCCGCCGATGAACGGCGCAACGGCCGCACACACGGC
CTTTCTTTTTCTCTTAACCGGGCACAATACCCCCATCTACAATGGACTGGATTACATGGCTTAAATAGCCAGACTCACCG
GCCACCCCGCAGCCTGAACGCACACATATCTCAACCACATGCAACCATATCATCCGATGCATGCACGTAACTAACAACTC
TGGAGTCTAACCAACCTACGTGCATGACACACACAACCTAATCAACTGACTCAATCATGATTATCCTAACAATCTCACCC
TAATCTTGATTTGCCGTTGCCCGTGTTGGTGCAGCTCCCGTCGTCGTCGTTTCCATGGCCGTCACAGCGGCCTCCACCCT
TTTCCTCGGCGACACACGCCGATCTTCTTCTTAGCCGGCGACACACGTCCGACATTCTGGCGACATACATCGTCTTCCTC
GTCTCCGGTTGCAGCGACATATGCCATCTCCTCCGACTCCGGCGACACATCCCGGTGACAGCCGCAATACCACGCATCTC
CTTGGGCCGACACACGACCCAGAGCTCCATCGCACAGCCGTCGGCGAACGCCGCCACCGCCGGCACGCGCCCGACATGGG
GAACGACGCCACCGCACACCCCAGCGCTGACGTGCAGCGCCTCCACACCGCCTCGCTGTGCCGCGCCTCCGCAGCTTCCT
CGCCGCGCCACCACGACCTCTGCGCCACCACGTTCGCCGCGGACTCACCGCGGATCGACAAGGCTCTGATACCAATTGTT
GGGACAAACCTGGTCCGGCGACGAACGCCGAATAGCCTCCAGCGGTACGACCGCCGGACGAACCTTTTATTGTCTCTCTT
GCTCAAACGGAGATAGAAGAAGTGCTAGACATAGATTTTCAGATGACGTACGCCTCGCCGCACGAACGGCGCCACGCCCG
CCGACGAACGGCGCAACGGCCGCACACACGGCCTTTCTTTTTCTCTTAACCGGGTACAATCCCCCCATCTACAATGGACT
GGATTACATGGCTTAAATAGCCAGACTCACCGGCCACCCCGCAGCCTGAACGCACACATATCTCAACCACATGCAACCAT
ATCATCCGATGCATGCACGTAGCTAACAACTCTGGAGTCTAACCAACCTACGTGCATGACACACACAACCTAATCAACTG
ACTCAATCATGATTATCCTAACATCCGCGGAGGCCACCTCGCGCCCTCAGTGGTGTGTGATCCTCAGTGGTGTGTGATCG
CCGGCACGCGTCCGGTCAAGTCGCCGGCGCTCCGTGCGACATTCCACCTCGCCGAGCCCCCGCGCGCCTCCCGCCTCCTC
GTCCCTGCCCACCTCCTCGGGTCGGGTCCACTCCCGGGCGTCGACAGAGGAATCATGGGCGCGCTCTTCTGCGACGTCCG
CGCCGTGAGCGCCGACGGCTTCCTCCTCCTCCTCAACTTCCTCGACGTCCGCACCACGGGCCCCGTCCTCGATAGTCAGC
GCGCTGACCCATTTCGGGACGCGACCCTTTCAACGCT-CCCGAGGCCACGCGGTTCGTCTGCAGCCCTCTCAGCGGCGAG
CTGTTCCGCCTTCCGGACATCGACGGCACCAAGGAGACACTGTGCGACAACCGCCTCGGCCTCCTCACCAAGGCCCGGCG
CGGTCACGGCCCGCCCGACAGGTACGCCATCGCCGAGCTCCTACAGGAAAAGGAGCCCTCGAGGTGCTTCTCCATGAGGC
GCTTCCTCTCCGAGACAGGGTAGTGGGAGAAGCTCACGGGCCTGCCGTCCCCGCTCCCACTCCCGCTGGCGCGTCGGATG
GAGGTGGACCACGAGGCCGTGGCCTTCGGCGGCCGGCTCTGGTGGGTCGATGTGAGCTGTGGTGCCGTCTCCGCGGACCC
GTTCAGCGACCGGCCCGAGCTCCGCTTCGTGGAGCTCCCGGAGGGCAAGGAGCGGGTGGCCCCTGATCA-CGGACCCTGT
GCAGATACCGGCGCGTTGGGATCAGCGAGGGGAGGCTGCGTTACGCCGTGGTGTCCCAGTGCGACCCCTTCGTTCTCCGT
TCGTTTGCCCTCAATGGCGACGACGATTGGACACTGGAGCATGAGGTGGCGCTTAGCCCACTCTAGACGAACGGGGGCTA
CCCCTGGCTGCCTATGGAGGAGACACCAAGGATTGGCGTCATCGACCCCATGAACGCGAGCATCATGCATCTCACCATCG
GCAACTATGTTGTCACCGTGGACATGGACACGGGGAAGGTGGTTGCTAGTGTAATTGTCTCGGCGGCGCATCAGCTTGGT
CTAATCATGACCGATGGTGGTTTCTTTCGGGCATTTCTGCTCTCGCCGTGGCTTGGATCAAGCCGGATTCCTCGTGCAGG
TAATCGACTT--GCATGACTCATTCTTCTGAAATGCATGATTGAAAATAGCTAAGTACTCCCTCCGTTTCAAATTATTTG
TCGCAGGTATGGATATATCTAGATGTATTTTAATTCTATATACATCCATTTCTGCGACGAGTAATTTGAAAGAAAGGGAG
TAGTACGTATAATATAAGATCCAATTAAAGTTGTGCGTTCAATTCTTAATCATGATGCGTGAACTCAAGTTCAGGGGGGC
ATTTGACATGCATAGGCTAAGTACAATGCTCAACTATTAAG---------------TTTGTTAATTGATTGGGAATTAGA
AATGCGTGAACCGTTTGATTTGCCTCGGCGAAAGATTGCGT-AACCTCCCAAAATTGATATATTGGGAATTAGGGGCCAA
ACTGTAATCAAGCTTGT----------TTCGAACATGAGAATGGT----------GTTACGTTCTAATTCAATCAAACAA
GGTTGTTGGCTTCGCAAGGATACGATTTGTTGACTGGTGTGGGAATAAGAAGTTCCTCTACACTTTCTTTGTTCACATTC
TACTGAAGTATTGAACACAAAACTTTCTGCGTCAAACTAGCAAAGCCCAAATTGTTG-----------------------
-TCCGGTCTAAAGCATGGCTAGGGGGTTATCTGCCAAATTTCAAAGTTACTGATGTATGTTGTACATT-TTTCATCTTTT
TGTCACTCGGTCTTAGGTGAAGGATGTCATAGCCTCTTAATCATTCCTCTATACTTTCTTTGTTTCACGGACTACTCAAG
CTTTTTTCTTGGACGTCGTAACTGCCACACGTGTGGTGTATCGGGTGGTTGTGCTGCACGCCCTGTGTGACACGAAGACG
ACCCCGCCCGCACGACCGCGTCCGGGCGCGCGCAGCCACAGACCGCACGCCCGGTGCAGCACGATCGCCCCACACGAGCA
CGTACGGGCGAGCGAGCACGCGGCTCGCACGACTCGTCTCGGCCGTCGCCCCTCCCCGCCTACGAGCCACACGTCCCGTG
TGTCACACGCCCTGCGTGTCAGTAACCACGCGTCCCGTCGCGATTGCCATGGTCCGGACCCTCTTCAGTTGCCATGTTGC
CATGTTGCTGAACTACAGTTGCCATGTTGCCATGTTGCTGAACTACAGTTGCCATGTTGCTGAACTACAGTTGCCATGTC
GGACAACTACAGTTGCCATGGTTTCTCAACTGCAGTTGTCATCTTAGGTCAAGTGTCGGATGTCATTTTTGGGCAACTGC
AGTTGTTGCCATGTATGGTCTTGTCTACTACAGTTACCATGATTTGAAAAACTTTAGGAATTGCCACCTACTAACACTGG
ACAGTTGCCATGTAGCACTAAAAAAAACATGGCAAAAAGTATGTTTCGGGTAAAGAGAGAGTTGTCATCTGCTTACAAGC
ACGCTAGAGGCAGTTGCCATGTACCCTGCAAAAACACATGTCAACTGATAGCTTTGGTGTGTGGGAGAGGAGACGGGCAT
GTGAGCGATGGTGGTATCTTTAGGAGTTGCCACCTACTAACACTAGACAATTGCCATGTAGCGCTACAAACAAACGTGGC
AACAATAACATGTTCGGGTGAAAGAGAGTTGCCATCTGTTTAGAATCACAAATAGGGCAGTTGCCATGTACCCCTCAAAA
GACATGGCAAATGACAGCCTGGGTGTGGGAGAGTGGGAGAATGGGCAGTCGTGGGAGATGGGGAACAGAAATGGTGCGTG
GCGTGCGGGCGCGACATCAATTTCATCGCACGCCCCGACTGGCGAACCATTGACCGCGGAGAGAAAACGGCGTGCGGGCG
AACTCCCTCACACGCCACACACACGAGTTGTCCTACGTGGCACACAAATTCAGTCTTTTCATGCCAAGATTCGTGCAAAA
AGCGCTGGACGGCAATGAAGGCGTGTGGACGAGTTGGCTAGCGCCCACACGTGTGAGCATTAACATTTCGTTTTTTTAGG
ATAAAAGAAATGCATTAAAATCAACCATCAGGGTTGCAATCGGACAGTAGAATTTCTTTCAGCTCCAAAGGAACTTCTGC
CATGAAGAAAAAATCACCATATCTTCTAGCCAAGTCAGCAAGGCTATGTGCTAGCTTATTCTGCTTCCTACTCACCCATC
CAATCTGAAACGAACTGAAAGAGTTCAGGAGAGCCTGAATGTCATTGATTATGGAGAAAAGACTGGATTGGTTAGGGACG
CCAGGTTCCAATGCTTTGGACAGAGCCATAGTCTACTCAAGTAATAGTATATTGTTGTCATGAAAAAAAGTTTGACCGCT
TTAATCAGCATCAAGCTGTGGATATGGGCATGCTGTGACGATCTACTGGAAAACGTAAATTCTTCATTTGTTTCGGAAGG
-AAATCTCAATTATTATCTTTAGTGCACAGAAAACTCTACTGTTATA---------------------------------
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>chr1A_3069
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-----------------------------------------------------------------------TTGGTATTG
TGGGCTGATGCTATGTTCAAAGTTACTATTTCAAACGTTTGTGACGAAAAGGAGCCATTTTCAGGCAAGCGGGACAATGC
CAGGAACAAGACTCTGGCAGATGTTCTGATTCGCTCAAACTGATACTAGAGCAGATGAAGCATGCAAGGTACCAGCCA--
---ATATCTTTCGATACTTTCTTATATTTAATTCTTCTATGACCTTATCAGGATACTGCATTCCTTTCTATCCATCCAGC
GTGTATACATATCTGTGCTCCTGCTCGGTATTCTTGGTGTGTGTTCAGACTTCAGAGAATCTGTAGGGGAGTTATTGATC
TGGATAAAACAGATCAGGGGTGCTGGACAGCGCTAGTTTAGATC---GCTGCTGCTGCTCTTTCCTGGGCCCTTGGGCGT
ACCATAAACGATTTGATCTTTTGAAGCTACCAAGCTAATCCATCATCTGGCTGACGCACTTCGTCAATTTGCAGCAACGG
CGTGCGTTTTGGAGTTAGATGCAACAGGAGGTGTTCGAGATCATTTTCGACGGGATTCAACCTATCATCATCAGGGGGAG
CCATTGGAGTTTGGGGAGTTTTTCTTAGCTTCGATCAAGACTCTTGCCTTTCCAAGTTTTATTTTGCTTTGTATGGCTAT
CTTGTAAACAGGGCCAAACCTGAAACCTGACAGCTTTTGAATGGAAGCTGGGCGATAAACCTTTTCTCTAAAAGGGTCAT
GAATATTTTACCAA------------------------------------------------------------------
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>SNPs
---------S----------------S-----SSSSS----------S----S----S----------------------
S--S--------S----------S--------------------S------S-------------------------S--
---S-----S---------------------------------S------S--S------------------------S-
---S------------------------------S-----S-------------------------------------S-
-------------------S------------------S-----------S---S--S----------------------
---------------S--SS---------------S-----------------S------SSSSSSSSSS----------
------S-S---------------------------------------S-SSS----------S----------------
--------------------------------------------------S--------------S--------------
----SS-----S--------------------------------------------------------------------
------------S-------------S-----------------------------------------------------
-SS----------------------------------------S-S-------------------S--------------
------------------------------------S--------------S-----------SS---------------
-------------------------SSSS--------------S----------------------S-------------
-------------------S-S--S-------------------------------------------------------
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-----------------------------------------------------S--------------------------
--------------------------------S-------S---------------------------------------
-----S-S------------------S-----------------------------------------------------
-S----------------------------------------------------------------------S-------
--------------------------------S----S-------------------------S---------------S
-----------S--------------------SS----S-------------------------------------S---
----------------------------S-----------------------------------S---------------
-S------------------S-----------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------S-------------SS----------
--------------------S----------------------------------------S--S------S-------S
-----------SS----------------------------S----------------------S---------------
---------------------------SS------S--------------------------------------------
------------------------------------------------------------------S-----------S-
--------------------------------S---S------------------------S-S----------------
----------SS-------------------------SS-S-SSSSSSSSS--SSS-SSSSSSSSSSSS-----------
--------------------------------------------------------------------------------
---------------------S---S--------SS---S---S-------S-S---S---S---S--S-----S-S---
------------S-S------------S----S--------SSSSSSSSSSSSSSS---------S--------S-----
---S-SS---SS-------------S------------S--S-----------------S--------------S-SS--
----------S----S-SSSSSSSSSS-------S----------SSSSSSSSSS-------------------------
S---------------------S----S-------------S-----------SSSSSS-SSS-SSS----SS-SSSS--
S--SSSSSSS-SSS-S--------------S---------------S-SS-S-S-SSSSSSSSSSSSSSSSSSSSSSSSS
S---S-------------SS------------------------------S---S-------------S-----------
-----SS-S--S------S--------SS------S--------------------S----------S------------
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---------------------------------------------------S-------SSS------------------
S---SS---S-SSSSSSSSSS-----------------------------------------------------------
S---S----S--S---S--------------------SSSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSS--S------
--------------SS-SS-----S---------------S---------S----S--------------S--S------
---------------------S-------------------------------------------------S-SSS-SSS
SSS------S-S----------S----S----S--------S-S-S--S----------S----------S---------
-------------------------S----------S----------------S-------------------S------
-------------------------------------------SSSS---------------------S-----S-----
----------------SS------------------------------------S---S---------------------
--S----------------------------S----S-----S-S----S------------------------------
---S---------------------------------------------------S------------------------
--------------------------------S-----------------S-----------------------S--S--
-S------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSS
>forward_987
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-------CCGCTAGTCCAGTGTCCATC-----------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------
>reverse_4141
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------GCGTGCGTTTGACCCATATC
--------------------------------------------------------------------------------
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--------
>forward_2839
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------TCGACGGCACCAATAAGACC-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------
>reverse_6445
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------GTTGCTGCTGCTGCTCTTTC----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------
