>input_sequence_36354
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------ATGGTGAAGCCTGTGCAGGACGAGGAGA
ACCAGAGGCTGCTCCTCGACGACCACAAGGAGAAGCACTTCACCTCCGGCGAGGTGGTCCGGGACATCATCATCGGCGTC
TCCGACGGCCTCACCGTGCCCTTCGCCCTCGCCGCCGGCCTGTCCGGCGCCGACGCGTCTTCCTCGCTCGTGCTCACCGC
CGGGCTCGCCGAGGTCGCCGCCGGCGCCATCTCCATGGGGCTCGGAGGGTAAGGAGAGAGATCAAAATCTCCTTGATTTT
CTGGGTATATGTTTGCTCTGATTAATGTCGTTTGTTACTCCTCCGGCCAGCTATTGCTTTCCTGAACATGCCGCATGCAT
GC-TGCTGGCTTGCTGGATGCTTGATTAGCCAAT-TCTGGATTTGTATGCAAAGGCTTAATTATTTCTGAAA-CAGAGAT
TAGTGAGAGTAGCTTGCTGTTATTGATGCCAAGAATGGAAAGTAGGGGAATGCTTAATAACGTCCACTAACCAAAAATTG
GAGAACTT-TGTCGCACAGACGAATGTTTTTTGATGAGTACCA-GCTAATTTTTATACTCCTACAGTGTTAAGTACCTTC
CTACATTGTTCACTAAGTTGGGTCATTTATTGTCCAGAGTCTGGACAACCACTTACCTAGGATTTCTGTAGTTTTCCTTT
GTGTCAGCAACAGCTAGGAGTACAAAACAATACTTCCTCCGTGACAAATGCAGGACCTATTTTATGCCCTATGCAAAACC
AAAAACAAAACTGTTCCA-------------TGCCCGATCTTTGCACGACATGTAAATCCAGCGGCTAGTGCCCTTTTCA
GCCATACGCATGTCCGGCTGGATTTAATCTTCATGTGTGAATTGTGTATTTATTAAG-AAAAAAGACGGTAAGTGAGGCC
CCATAG---TAGTTGGTGTAACAAACCCAAGTTACAGGTACCATGCCTTAAATCTGAGTAGGTGGAAAGGCAGCAACCCC
TTTCCACCAATATGTTGTGCGTTAGTCTGTGAATCATGCAGATTTTGTCGTGTGCATAGCATGACTCAATCAAAAATGTA
CAATTATATGCTAGACTCCTAGTGATCCCAAAATGCAATACTGTTCACCCACACTAAGCGCACCTGC--ACACACACGTG
CATAGGAATTTGACCGGAGTACATTAGAAATAGGGATTATTTTCACACATGAATTACTCAAAATTTTT---TTGCCAGTT
TTTCGTTGATGTATATATGGAATATTCACCAAACGAATAACAAAGTTCTGGAGCAAAATATTCGTTATTTTCA--GAGTT
TATAGTTTCTCCCTGTTTCACAATTTCAAGCACTAC--------------------------------------------
-------------------------------------------------------------TATTTTTTAGAAAATCGCA
AGCACTAA-----TTTTTTTTAGCAAAAGGACTAATTACTAAAACGGGCCGAAGTGATGTCTATATTTAACCCAGCCCAA
AGCGGGCCAACTTCTGCTGGGCCGTACCAAACGGAATTAACGCAGTAAAAGCCTACGGCTAATGTGGGCTCGCACTCTTG
TCAGGTACCTCGCCGCTAAGAGCGACGCCGACCACTACTACCGGGAGCTGCAGCGCGAGCAGGACGAGATCGACACCGTC
CCGGACACAGGTCACTCTCTCACTTGACACTCTTTATTCATCTAAAAAAACTTGACACTCTCTATCGATTCTAATCTAAT
C--TAAGTATCTAACGGCTGAGATGCATTTCTTTGAGCAGAGGCCGCAGAGATCGCGGACATACTCTCTGAGTACGGGCT
GGGCCCCGAGGAGTACGGGCCGGTCGTGACCTCCCTCCGCAACAACCCAAAGGCCTGGCTCGAGTTCATGATGAAGTAAT
CAAATCAGTCAAGCTTAACAAACCCACTCATTTTTTTTTCTAATTAATCTAACCATGTGACTGATCACGGCGGAACTTTG
G----CGCACGCAGGTTCGAGCTGGGGCTGGAGAAGCCGGACCCGCGGCGCGCGCTGACGAGCGCGGCGACGATCGCGCT
GGCCTACGTCGTCGGCGGCATGGTGCCGCTCTCCCCCTACATGTTCGTGGCGTCGGTCGACAGCGCCATGATGACCTCCG
TCGTGGTCACCCTCGCCGCGCTGCTTTTCTTCGGCTACGTCAAGGGCCGCTTCACTGGGAACCGCCCGTTCCTCAGCGCC
ATCCAGACCGCCATCATCGGCGCGCTCGCCTCCTCCGCCGCCTACGGCATGGCCAAGGCCGTGCAGGCCATCTGA-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------
>chr5D_1_TraesCS5D01G209900
CTTAAAGAAAACCCGAGACAAACGCTCATGCTACTGCACG----------CTGATATCGAGCTCACCTCTGCCCAAGACC
ATGCACCGACACTCTCTTCTCTGGTGACTGAGCCAGGCCGCACGGCTATCGAAGATCGCTGCGTTGGATCACCAGCGCCG
CTGTCAACCATCGCCTGCCGAAGACCGCAGCTCACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACTGG
TTGTGCTAGTTCATATTCCTGCATTTTACAAATCCTTTGAATCAAAGATGCCCTAAAAGTTGGACGTGCAATAACGATCG
TTGTCTCCT-CCTTTGAGTTTATGCAAACAATACAACTTGGCATGAGATGGATCCGTGGTTCCATGGTAGATTGGTCTCA
GCAAATAAT-AAAGTGAAGTACGGACGCATAAAAACAGAATCAGACATACTCACCACACATTCACATAGTACCTCGCGTG
CCCAAATCCCAAGATTGCCCCGACTTCCCATGTCCAAACAGGACATTTCACCCGGCCTCCAACCCCTATAAATCCCCCCT
CCCAGCTCTGTCCACTTCGCCTACACCAAAACCCACCCTTGTCATCGCAGATCACGAGCTAGCTAACTGAGCGCAGGAAA
TAGTTAAGCACACCAGCTCGCTCGTAAGCACGCTCCCACGCCGACCGGCAAGATGGTGAAGCCTGTGCAGGACGAGGAGA
ACCAGAGGCTGCTCCTCGACGACCACAAGGAGAAGCACTTCACCTCCGGCGAGGTGGTCCGGGACATCATCATCGGCGTC
TCCGACGGCCTCACCGTGCCCTTCGCCCTCGCCGCCGGCCTGTCCGGCGCCGACGCGTCTTCCTCGCTCGTGCTCACCGC
CGGGCTCGCCGAGGTCGCCGCCGGCGCCATCTCCATGGGGCTCGGAGGGTAAGGAGAGAGATCAAAATCTCCTTGATTTT
CTGGGTATATGTTTGCTCTGATTAATGTCGTTTGTTACTCCTCCGGCCAGCTATTGCTTTCCTGAACATGCCGCATGCAT
GC-TGCTGGCTTGCTGGATGCTTGATTAGCCAAT-TCTGGATTTGTATGCAAAGGCTTAATTATTTCTGAAA-CAGAGAT
TAGTGAGAGTAGCTTGCTGTTATTGATGCCAAGAATGGAAAGTAGGGGAATGCTTAATAACGTCCACTAACCAAAAATTG
GAGAACTT-TGTCGCACAGACGAATGTTTTTTGATGAGTACCA-GCTAATTTTTATACTCCTACAGTGTTAAGTACCTTC
CTACATTGTTCACTAAGTTGGGTCATTTATTGTCCAGAGTCTGGACAACCACTTACCTAGGATTTCTGTAGTTTTCCTTT
GTGTCAGCAACAGCTAGGAGTACAAAACAATACTTCCTCCGTGACAAATGCAGGACCTATTTTATGCCCTATGCAAAACC
AAAAACAAAACTGTTCCA-------------TGCCCGATCTTTGCACGACATGTAAATCCAGCGGCTAGTGCCCTTTTCA
GCCATACGCATGTCCGGCTGGATTTAATCTTCATGTGTGAATTGTGTATTTATTAAG-AAAAAAGACGGTAAGTGAGGCC
CCATAG---TAGTTGGTGTAACAAACCCAAGTTACAGGTACCATGCCTTAAATCTGAGTAGGTGGAAAGGCAGCAACCCC
TTTCCACCAATATGTTGTGCGTTAGTCTGTGAATCATGCAGATTTTGTCGTGTGCATAGCATGACTCAATCAAAAATGTA
CAATTATATGCTAGACTCCTAGTGATCCCAAAATGCAATACTGTTCACCCACACTAAGCGCACCTGC--ACACACACGTG
CATAGGAATTTGACCGGAGTACATTAGAAATAGGGATTATTTTCACACATGAATTACTCAAAATTTTT---TTGCCAGTT
TTTCGTTGATGTATATATGGAATATTCACCAAACGAATAACAAAGTTCTGGAGCAAAATATTCGTTATTTTCA--GAGTT
TATAGTTTCTCCCTGTTTCACAATTTCAAGCACTAC--------------------------------------------
-------------------------------------------------------------TATTTTTTAGAAAATCGCA
AGCACTAA-----TTTTTTTTAGCAAAAGGACTAATTACTAAAACGGGCCGAAGTGATGTCTATATTTAACCCAGCCCAA
AGCGGGCCAACTTCTGCTGGGCCGTACCAAACGGAATTAACGCAGTAAAAGCCTACGGCTAATGTGGGCTCGCACTCTTG
TCAGGTACCTCGCCGCTAAGAGCGACGCCGACCACTACTACCGGGAGCTGCAGCGCGAGCAGGACGAGATCGACACCGTC
CCGGACACAGGTCACTCTCTCACTTGACACTCTTTATTCATCTAAAAAAACTTGACACTCTCTATCGATTCTAATCTAAT
C--TAAGTATCTAACGGCTGAGATGCATTTCTTTGAGCAGAGGCCGCAGAGATCGCGGACATACTCTCTGAGTACGGGCT
GGGCCCCGAGGAGTACGGGCCGGTCGTGACCTCCCTCCGCAACAACCCAAAGGCCTGGCTCGAGTTCATGATGAAGTAAT
CAAATCAGTCAAGCTTAACAAACCCACTCATTTTTTTTTCTAATTAATCTAACCATGTGACTGATCACGGCGGAACTTTG
G----CGCACGCAGGTTCGAGCTGGGGCTGGAGAAGCCGGACCCGCGGCGCGCGCTGACGAGCGCGGCGACGATCGCGCT
GGCCTACGTCGTCGGCGGCATGGTGCCGCTCTCCCCCTACATGTTCGTGGCGTCGGTCGACAGCGCCATGATGACCTCCG
TCGTGGTCACCCTCGCCGCGCTGCTTTTCTTCGGCTACGTCAAGGGCCGCTTCACTGGGAACCGCCCGTTCCTCAGCGCC
ATCCAGACCGCCATCATCGGCGCGCTCGCCTCCTCCGCCGCCTACGGCATGGCCAAGGCCGTGCAGGCCATCTGATCGAG
CTCGAGCCGCGCCGCGCCGCGCCCGGGGGACGGCTAAGTACCAAGAAAAATAAATACAGCAAGCTACCTACCTGTGTATG
TATGATCAAGCGTTGCCGTAGTCGAGTGGTAGCTGTACGTGCAGACTCTAGCGTTCGATCTGGTAAGTGTACTGGTGGCC
CAAGTGTACTGATGTGCACCGTTTGTTTTGTTTTCTGTTTGTGTACTGGTAGCCCAAAGTGTACTGCAGTATGTTAGTAG
TGTA----TTTGGGTGTACTTGTTTTTTCTTGCCATCTGTCGCGTTAGGTAAGTATACTATTTGTAAGGCAAGTTGCGTT
TATTTGGGTGCGGTGGTAATCTGATGGGCTTTGAATCAGCTGGCAAATGAGTCTTGCGAATCCTCTAAGCAGAGGCCCAT
ATAACTCTTCTGAAGTGAGTTTCGTTTCTGAATTCGTCGCCACATTGTCGG-AAAAAAATATTTCTGTGAAGTAGTAAGA
GATAGTGACGTCCTCTCACAAATCA-AAATTAAAAAT--AAAGAGATAGTGACATACCACATTATCTTGGCAACGACGAC
GAGGCAGCCAGCAACTCTGTTTCACGAAAGCAACCACAAGAAATATCGCACTCTTGAAAACAATATAAAACCGGAAGACC
GGAGTGAGGTAGTTCTTATCAAGTCAATAGCAACATAAAAACAGTGCACATCCCCGCTAAAAGAAG-ACAGTGCGCAGTG
TAAAAAACAGAATTATGACATTTCTGAACAAGCATATCAACATAAACTTGTGAAAATAGCTGACACAACAAACAATTGGT
CTAGACCAAATACATTGATAGTAGCATTAGTGCGGCCTTTGCAGTTATGGATTGGTGATTCAGGGGTTCTATTGTTTAAG
ATTAAAGAAGCCGATATTAATTCTTCTGGAACTTCTATTTAAGAACAGATTAGCCATATTCATCTTCTCGAGTCTCTAGG
TTCTTTTCTGATTACTGATTAATGATGGGTTGCCTTCATCTTTC
>chr5B_1
CTTAAAGAAAACGCGAGACAAACGCTCATGCTACTGCACGCCAGACGGTTCTGATATCGAGCTCACCTCTGTCCAGGACC
ATGCACCGACACCCTCTTCTCTGGTGACTGAGCCAGGCTGCACGACTATAGAAGATCGCTGCGTTGGATCACCAGCGCCG
CTGTCAACCATCGCCTGCCGAAGACCGCACCTCACCATTCATCTCCGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCAAGGCGTTGCGG--------------
--------------------------------------------------------------------------CACTGG
TTGTGCTAGTTCCTATTACTGCATTTTACAAATCCTTAAAATCAAAGATGCCCTAAAAGTTGGACGTGCAATAACGATCG
CTCTCTGCTCCCTTTGAGTTTCTACAAACCATACAACTTGGCATGAGATGGATCCGTGGTTCCATGGTAGATTGGTCTCA
GCAAATAATAAAAGTGAAGTACGGACGCATAAAAACATAATCAGACATACTCACCACACATTCACATAGTACCTCGCGTG
CCCAAATCCCAAGATTGCCCCGACTTCCCATGTCCAAACAGGACATTTCACCCGGCCTCTAACCCCTATAAATACCCCCT
CCCAGCTCTGTCCACTTCGCCTACACCAAAACTT-CCCTTGTCATCGCAGATCACGAGCTAGCTATCTGAGCGCAGGAAA
TAGCTAAACACACCAGCTCGCTCGTAAGCACACTCCCACGCCGACCGGCAAGATGGTGAAGCCTGTGCAGGACGAGGAGA
ACCAGAGGCTGCTCCTCGACGACCACAAGGAGAAGCACTTCACCTCCGGCGAGGTGGTCCGGGACATCATCATCGGCGTC
TCTGACGGCCTCACCGTGCCCTTCGCCCTAGCCGCCGGCCTGTCGGGCGCCAACGCGTCCTCCTCGCTCGTGCTCACCGC
CGGGCTCGCCGAGGTCGCCGCCGGCGCCATCTCCATGGGGCTCGGAGGGTAAGGAAACAGATCGAAATCTCCTTGATTTT
CTGGGTATATGTTTCCTCTGATTAATGTCGTTTGTTACTCCTCCGGC----TATTGCTTTCCTGAACATGTCGCATGCAT
GC-TGCTGGCTTG-----------------------CTGGATTTGTATGCAAAGGCTTAATTATTTCTGAAA-CGGAGAT
TAGTGAGAGTAGCTTGCTGTTCTTGATGCCAAGAATGGAAAGTAGGGGAATGATTAATAACGTCTACTAACCAAAAAATG
GAAATTTT-TGCCGCACAGACGAATGTTTACTGATGAGTACCCCGCTAAGTTTTATACTCCTACAGTGTTA-GTACCTTC
CTGCATTGTTCACTAAGTTGGGTCATTTATTGTCCAGAGTCTGGACAACCACTTACCTAGGATTTCTGTAGTTTTCCTTT
GTGTCAGCAACAGCTAGGAGTACAAAACAATACTTCCTCCGTGACAAATGCAAGACGTATTTTATGCCCTATGCAAAACC
AAAAAAGAAACTGTTCCACGCCCGGTACTTGTGCCCGATCTTTGCACGACATGTAAATCCAGCGGCTAGTGCCCTTGTCA
GCCATACGCATGTCCGCCTGGATTTAATCTTCATGTGTGAATTGTGCATTTATTTTGAAAAAAAGACTGTAAGTGAGGCT
CCGTAG---TAGTTGGTGTAACAAACCCAAGTTATAGGTACCATGCTTTGAATCTGAGTAGGTGAGAAGGCAGAAACCCC
TTTCCATCACTATGTTGTGCGTTAGTCTGCGAATCATGCAAATTTTGTCCTGTGCATAGCATGACTCAACCAAAAATGTA
CAATTATATGTGAGACTCCTAGTGATCCCAAAATGCAATACTGTTCACCTACACTAAGCACACCTGCACACACACACGTG
CAAGGGAATTTGACCGGAGTACATTAGAAATAGGGATTATTTTCACACATGAATTACTCAAAAAAA------TGCCAATT
TTTCGTTGATGTATATATGAAATATTCACCAAATGAATAATAAAGTTCTGGAGCAAAATATATGTTATTTTCACAGAGTT
TATAGTTTCTCCCTGTTCCGCACTTACAAACACTACTACTCCCTCCGTTCGGAATTACTTGTCTCGAAAATGGATGTATC
TAGAACTAAAATACGTCTAGATACAACCATTTCTACGACAAGTAATTCCGAACGGAGGGAGTACTTTTTAAAAAATCGCA
AGCACTAA-----TTACTTTTTTTA----CACTAATTACTAAAACGGGCCGAAGTGATGTCTACATTTAACCCAGCCGAA
AGCGGGCTAACTTCTGCTGGGCCGTACCAAACGGAATTAACGCAGTAAAAGCCTACGGCTAATGTGCGCTCGCACTCTTG
TCAGGTACCTCGCCGCTAAGAGCGACGCCGACCACTACTACCGGGAGCTGCAGCGCGAGCAGGACGAGATCGACACCGTC
CCGGACACAGGTCACTCTCTCACATTCTCTCTC----------------ACCTGACACTCTCTATCGAT-CTGATCGAAT
C--TAAGTATCTAACGGCTGAGATGTATTTCTTTGAGCAGAGGCCGCGGAGATCGCGGACATACTCTCTGAGTACGGGCT
GGGCCCCGAGGAGTACGGGCCGGTCGTCACCTCCCTCCGCAACAACCCAAAGGCCTGGCTCGAGTTCATGATGAAGTAAT
CAATCAGTCAAGCCCACCCAG-CCCACTCACTTTTTT-TCCAATTAATCTAACCATGTGACTGATCGCGGCGGAACTTTG
GTGCACGCATGCAGGTTCGAGCTGGGGCTGGAGAAGCCGGACCCGCGGCGCGCGCTGACGAGCGCGGCGACGATCGCGCT
GGCCTACGTCGTCGGCGGCATGGTGCCGCTCTCCCCCTACATGTTCCTGGCGTCGGTCGACAGCGCCATGATGACCTCCG
TCGTGGTCACCCTCGCCGCGCTGCTCTTCTTCGGCTACGTCAAGGGCCGCTTCACCGGGAACCGCCCGTTCCTCAGCGCC
ATCCAGACTGCCATCATCGGCGCGCTTGCCTCCTCCGCCGCCTACGGCATGGCCAAGGCCGTGCAGGCCATCTGATCGAG
CTCGAGCCA-----CGCCGCGCCCGGGGGACGGCTAAGTACCAAGAAAAATAAGTACAGCAAGCTACCTACCTGTGTATG
TATGATCAAGTGTTGCCATAGTGGAGTGGTAGCTGTACGTGCAGACTCTAGCGTCCGATCTGGTAAGTGTACTGGTGGCC
CAAGTGTGCTGATGTGCACCGTTCGTTTTGTTTTCTGTTTCGTTTTCGAGCTCGATGATGATG-TACACTATGTTAGTAG
TGTATATGTTTGGGTGTATTTGGTTTTTCTT-----CTGTCGCGTTAGGTAAGTATACTATTTGTAAGGGAAGTTGCGTT
ATTTA-GGTGATGTGGTAATCTGATGGGCTTTGAGTCAGCTGGCAAATGAGTCTTGCGAATCCTCTAAGCAGAGGCCCAT
ATAACTTTTCTGAAGTGGGCTTCGTTTCTGAATTCATCGCCACATGTCGAAAAAAAAAATATTTCTGTGAAGT---AAGA
GATAGTGACGTCCTCTCTCAAAATTTAAATCTAAATT--AAAGAGATAGTGACATACCACATTATCTCGGCAATGACGAC
GAGGCAGCCAGCAACTCTGTTTCGCGAAAACAATCACAAGTAATATCACTCTCTCGAAAACAACATAAAAACGGAAGACC
AGAGTGAGGTAGTTCTTCTCAAGTCAATAGCAACATAAAAACAGTGCCCATCCGCAAAAGAGAAAAAACAGTGCACAGTG
TAAAGAAAAGAATTATTACATTTCTGAGCAAGCATATCACCGTAAACTTGTGAAAATATCTGACATAACAAACAATTGGT
CTGGACCAAATACATTGATAGTAGCATTAGT-------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------
>chr5A_545
CACTA---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------G
TTGTGCTAGTTCCTACTCCTGCATTTTACAAATCCTTTAAATCAAAGATGCCCTAAAAGTTGGACGTGCAATAACGATCG
TTCTCTGGTCCCTTTGAGTTTCTGCAAAGCATACAACTTGGCATGAGATGGATCCGTGGTTCCATGGTAAATTGGTCTCA
GCAAATAAT-AAAGTGAAGTACGGACGCATAAAAACAGAATCAGACATACTCACCACACATTCACATCGGACCTCGCGTG
CCCAAATCCCTAGATTGCCCCGACTTCCCATGTCCAAACAGGACATTTCACCCGGCCCCTAACCCCTATAAATCCCCCCT
CTCAGCTCTGTCCACTTCGCCTACACCAAAACCCACCCTTGTCAAGGCAGATCACGAGCTAGCTAACTTGGCGCAGGAAA
TAGCTAAGCACACCAGCTCGCTCGCAAGCACGCTCCCACGCCGACCGGCAAGATGGTGAAGCATGTGCAGGACGAGGAGA
ACCAGAGGCTGCTCCTCGACGACCACAAGGAGAAGCACTTCACCTCCGGCGAGGTGGTCCGGGACATCATCATCGGCGTC
TCCGACGGCCTCACCGTGCCCTTCGCCCTCGCCGCCGGCCTGTCCGGCGCCAACGCGTCCTCCTCGCTCGTGCTCACCGC
CGGGCTCGCCGAGGTCGCCGCCGGCGCCATTTCCATGGGGCTCGGAGGGTAAGGAAACAGATCAAAATCTCCTTGATTTT
CTGGGCATATGTTTCCTCCGATTAATGTCGTTTGTTACTCCTCCGGCCAGCTATTGCTTTCCTGAACATGCCGCATGCAT
GCCTGCTGGCTTGCTGGATGCTTGATTAGCCAAAATCTGGATTTGTATGCAAAGGCTTAATTATTTCTGAAAACGGAGAT
TAGTGAGAGTAGCTTGCTGTTCTTGATGCCAAGAATGGAAAGTAGGGGAATGCTTAATAACGTCCACTAACCAAAAAATG
GAAAAAAAATGTCGCACAGGCGAATGTTTTCTGATGAGTACCA-GCTAATTTTTATATTCCTACAGTGTTA-GTACCTTC
CTGCATTGTTCACTAAGTTTGGTCATTTATAGTCCAGAGTCTGGACAACCACTTACCTAGGATTTCTGTAGTTTTCCTTT
GTGTCAGCAACAGCTAGGAGTACAAAACAATACTTCCTCCGTGACAAATGCAAGACGTATTTTATGCCCTATGCAAAAAA
AA----------GTTCCACGCACAGTACTTGTGCCCGATCTTTGCACGACATATAAATGCAGCGGCTAGTGCCCTTTTCA
GCCATACACATGTCCGGCTGGATTTAATCTTGGTGTGTGAATTATGCATTTTTT-----AAAAAGACTGTAAGTGAGACC
CCTACAATATAGTTGGTATAACAAACCCATCAC---GGTACCATGTCTTGAATCTAAGTAGGTGGGAAGGCAGCAACCCC
TTTCCACCACTACATTGTGC----GTCTGCGAATCGTGCAAATTTTGTCGTGTGCATAGCATGACTCAACCAAAAATGTA
CAATTATATGCGAGACTCCTAGTGATCCCAAAATGCAATACTGTTCACCCACACTAAGCGCAT-----------------
------------------------------------------------ATGGATTACTCAAAAAAAAAGAATTGCCAATT
TTTCGTTGATGTATATATGGAATATTCACCAAACGAATAATAAAGTTCTGGAGCAAAATATTCGTTATTTTCACAGAGTT
TATAGTTTTGCCCTGTTTTGCAATTACAAGCACTAC--------------------------------------------
-------------------------------------------------------------TGTTCTTTAGAAAATGGCA
AGCACTAACTACTTTTTTTTTAGCAAAAGCACTAATTACTAAAACGGGCCGAAGTGCTGTCTATATTTAGCCCAGCCCAA
AGCGGGCCAACTTCTGCTGGGCCGTACCAAACGGAATTAACGCAGTAAAAGCCTACGGCTAATGTGCGCTCGCACTCTTG
TCAGGTACCTCGCCGCTAAGAGCGACGCCGACCACTACTACCGGGAGCTGCAGCGCGAGCAGGACGAGATCGACACCGTC
CCGGACACAGGTCACTCTCTCACATTCTCTCTCACTTGAC--------------ACTCTCTCTATCGAT-CTAATCTAAT
CTATAAGTATCTAACGGCTGAGATGTATTTCTTTGAGCAGAGGCCGCAGAGATCGGAGACATACTCTCTGAGTACGGGCT
GGGCCCCGAGGAGTACGGGCCGGTCGTCACCTCCCTCCGCAACAACCCAAAGGCCTGGCTCGAGTTCATGATGAAGTAAT
CAAATCAGTCAGCCCACCCAG-CCCACTCACTTTTTTTTCCAATTAATCTAACCATGTGACTGATCGCGGCGGAACTTCG
GTGCACGCACGCAGGTTCGAACTGGGGCTGGAGAAGCCGGACCCGCGGCGCGCGCTGACGAGCGCGGCGACGATCGCACT
GGCCTACGTCGTCGGCGGCATGGTGCCGCTCTCCCCCTACATGTTCGTGGCGTCGGTCGACAGCGCCATGATGACCTCCG
TCGTGGTCACCCTCGCCGCGCTGCTCTTCTTCGGCTACGTCAAGGGCCGCTTCACCGGGAACCGCCCGTTCCTCAGCGCC
ATCCAGACCGCCATCATCGGTGCGCTCGCCTCCTCCGCCGCCTACGGCATGGCCAAGGCCGTGCAGGCCATCTGATCGAG
CTCGAGCCGCGCCGCGCCGCGCCCGGGGGACGGCTAAGTATCAAGAAAAATAAGTACAGCAAGCTACCTGCCTGTGTATG
TATGATGAAGTGCTGCCGTAGTCGAGTGGTAGCTGTACGTGCAGACTCTAGCGTTCGATCTGGTAAGTGTACTGGTGGCC
CAAGTGTACTGATGTGCACCGTTCGTTTTGTTTTCTGTTTGTGTACCGGTAGCCCAAAGTGTACTACAGCATGTCAGTAG
TGTA----TTTGGGTGTACTTGTTTTTTCTTGCCATCTGTCGCGTTAGGTAAGCATACTATTTGTAAGGCAAGTTGCGTT
ATTTA-GG--CGGTGGTAATGTGATGGGCTTTGAATCATCTGGCAAATGAGTCTTGCGAATCCTCTAAGCAGAGGCCCAT
ATAACTTTTCTGAAGTGAGTTTCGTTTCTGAATTCGTCGCCACATTGTCGGAAAAAAACCATATCTGTGAAGT---AAGA
GATAGCGACGTCCTCTCACAAAATA-AAAATAAAAATTAAAAAAGATAGTGACATACCACATTATCTTGGCAATTGCGAC
AAGGCAGCCAACAACTCTGTTTCGTGAAAGCAACCACAAGAAATATCGCACTCTCGAAAACAACCTAAAAACGGAAGACC
AGAGTGAGGTAGTTCTTCTCAAGTCAATAGCAGCATAAAAACAATGCACATCCCCGCAAAAAAT--AACAGTGCACAGTG
TAAAAAACAGAATTATGACATTTCTGAACAAGCATATCAGCATAAACTTGTAAAAATATCTGACACAGCAAACAATTGGT
CTGGACCAAATACATTGGTAGTAGCATTAGT-------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------
>SNPs
------------S----------------------------------------------------------S---S----
------------S-------------------------S-----S----S------------------------------
-----------------------------S-----SSSSSSSSSSSSSS-------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------
------------S-------------------------S-----------------------------------------
--S---S--------------S-------S--------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------S--------------------
--------------------------------------------------------------------------------
---S----------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------S-------S--------------------
-------------------------------------------------------S-S----------------------
--------------S-----------------------------------------------------------------
---------------------------------S----------------------------------------S-----
---------------------S-------------------------------------------------------S--
--S--S------------------------S----------------------------------------S--------
--S-----------------------------------------------------------------------------
----------------------------------------------------S---S-----------------------
-----SS-------------------------------------------------------------------------
----------------------------------------------S-------SS-----------S------------
--S-------------------------------S--------------S---------------S--------------
---------S-------------------S----------S----------------------------S----------
-----------S--------------------------------------------------------------------
--SS-----------------------------------------------------------SSSSS---------S--
----------------------------------------S---------------------------------------
-------------------S-----S------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------S--------------------------------------------------
------------------------------------------------------------------S-------------
--------------------------------------------------------------------------------
-----------------------S-SSSSSSSSSSS-SSSSSSSSSSSS--S-----------------S----------
-------------------------S------------------------------------------------------
---------------------------S----------------------------------------------------
-----------SS-SSSS--SS--------S---------S-------------------------S-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------S-----------------------------S------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------S--------------------------
----------S---------------------------------------------------------------------
-----------------------S----------------------S------------------S--------------
--------------------------------------------------------------------------------
SS--SS--------------------------------------------------------------------------
------S------------------------------------------------------------------SSS----
----------------------SS-------------------------------------------------S------
-----------------------S------------------------------S--------S------S---------
S----------------S---------------------------------------S----S--S--------S-----
---------------------------------------S------------------S---------------------
--S----------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_93
-------------------------------------------------------------------------CAAGACC
ATGCACCGACACT-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------
>reverse_1986
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------AAAGGCAGCAACCCC
TTTCC---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------
>forward_1737
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------TCCGTGACAAATGCAGGACC-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------
>reverse_3686
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----GGGTGCGGTGGTAATCTGAT-------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------
