>input_sequence_36315
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------------------------------------------------------------AT--------------GGGC
CTCCTCGACAAGCTGTGGGACGACACCGTCGCGGGGCCCCAACCGGACACCGGTCTCGGCCGCCTCCGCAAACTCGCCGT
CCGCCCCGCCGCCGTCAAGATCAACGGTGACCGCTGCCCGCTAAAGATCGACATATTGTTAACCCTCGCCAGATCTTTGT
ACCATCAATCTGACCAGCTGTTTTGTTGTTGTTTTTTGTCGCGTTGGGT----CGTTCAGATGTGGCTCCGGGCGCCGCG
ATGGTGATCCCACCTACCACGCCGGCCGGCGGCGAGGATGCGCCGATGAAAGTCACGCGCAGCATCATGATTAAGCGGCC
GGCGGGGTACCCCTCGTCGCCGAGGAGCGCGGCCAGCACGCCGCCAGCCTCGCCGCTAGGATCCACGCCGCCCATCTCCC
CGTTCGCCGGCGGCGGTGAGCTCCCGTGCCCCTCATCCAACTTCTCGCATTA--ATTTTTTTTACGGTAGGGGCAGTTCG
GCCATTTCGTAGCCGCGTCCATGTGTGCGACGGGGAATGCCCGGGATGTGTAGGTTTCGTCTATGTGGCTTTTGTCCTGG
AGTTCGGAAGTGTCTAGACGGGGCTAGGGACATTTTGGACATTTCTGCCCGGGCAAGTGCTTTACCTCGCACGCCATGTA
GGATCGGATATGACGTAAAGTAGTTTCGGATAGGGAAGTGGGATCCTCTCCGCAAGGCGGGTGCTTGAAGAAAAAAAGTG
TGATTCGATGACAAAAGCTGAAAAAATTGGAGTGAAAAGTAGAGATGCATTTGTACTTAGAGTCCTTATTTTCTATTTCT
TAATGAGACCCACTAGTGATAGCTTGTATTAGAGAGAAAAAATTAATATAGATGCCTTAATTTACTTTTTGTCATGGGGC
ATATGTATCCATTTGTATCCATATGTTACCATTGTACATGCCCTTAGCTCTCGGGTCTTTCGTGGGATCATGACTGGATA
TCATCGTGTTCGATAAGTTACCATTTATGTGGTGTCTTTGAAATGCAGCGGCAACCGGATAAGTGTAGCTATCAGGCTGT
AAGGTTTGCCTTCCAAGAGAAAATAGCGACGCCTTTCTGTTTTCTGTTCGTAGAAGAACAAAAAATG---------GATC
TGTACCAGTATGGAGCTGCTTTATCTAGTA---CTCCTTGTGTGCGTGAAGTTGTCAATGGGGTGTTGGCCTAATTGAAG
CCAGCTCTCCCGACCCCACTTGACGTTGGATAGCGAAGCCAGCAATGGACCGTTCGTCAAGCCAAGAGCATAGACCTAGT
AGTAATACTATTTCTAATTGGTCACCAAGTCTCCAGAGTGCACACAAGAGTTCATACTT---------------------
--------------------------------------------------------------------------------
---------------------------------CTCCGTTCCAAAATACTTGGAAGTTCTAGGTT-GTCCCAAGACAATT
TTTTTTCAAGTTTGACCAAGTTTGTAGAAAAATATACCAAAATCTTCTACCTTT--------------------------
-------------ATACTTTATATATTTGACAGTGTAAATATTAGAAAACTTTTCTA-----------ACAGTTGGTTAA
GTTAGCCTTAAGACAAACCTACA-------------------------------------------------TATTGTGA
ATTTGTGTGCCGTGGGTGCAGTTAATTTACTTATGGATATGCTCTGGTTATACCTATGCTTACGAGGAACCTCTTTTTGT
TTGTATTTCTGTATGGAAACAGATACTTTGATGTTGAACAGGTTCTGGTATATTATTTTGCAGATCTGTGCTTGAGGTTG
AATCAGTTTATCTATCTTGGGTAAAATATTAC------------------------------------------------
-----------------------------------------------------------------------------GAC
TTAGACAGTGATGTGGTTGTAGATGATTTCAAGAAACAGGGATACTTGTACAATTAATCATCGTTCCGCTTTCCAAGTCC
ACAACTTCGTTTGACTTGTCAGATTCCTGTTGGAAGATTTACTTATTATCCCTTGTTGATGCTGTCTTTGTCTACTCAC-
--------TGACCAATTATGGAAGAGTTTGTAAGAATCACATGGTAGTGTGTGGGAAAACATGGATACATG---------
------------------------------GCATGCGGCATGGAATTTTTCATTTATTTGTATATTTAT----ATTCTAT
ATACATCATCTTTTGTGGTTCATTAATTAAATTCTTTTTCCACACAAACAAAATTAATTGTTCTTCTTTTTTGTTGAACT
AAATTAATTGTTCTTCTTACCTAAACTCGAACGGACTATGTTTACCAGGTGGTCGCTTCAGAAGGAAATCATCCTCGGAT
GCATACCAGAGGGCTACCA---CTGGGGCGTCGACCAGTCACCCTCCTCCCCCCTTTGAGGTGTGA--------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------
>chr4A_1_TraesCS4A01G158100
GGTCGTTACAGGTGGTTTGGGCGATATCTGCGACGAGGACGCCACCTGAGGCGGCGAGCGCGCCGGTGGAGGGGTCCAAG
GACATGGAGAGGATGTCAGAGGGGAAGCCCGCCTTGAGGAAGACGACACTAGCACTGCAGCGGCACATATGTGCTATCCA
TGGACTGGCCGGCGATGCGAATCCCTACCTAGACGACGCCGGTGGTGTCGGGAGACATCGAATTGTCGGAGACGTTCGCA
TCAAAGATATGCCAGACCCCTTCGGGAGGAGAGAAGATAAGGGAATTTCAGTAATTAAAAAGAAAACCAGTTTTTCATAA
GTGGGGTCTATCTGGCCATGTGTCAAGCATTGGTTGACCCTGCACAATATTCCCAGCACAAGAGCTGATCCCGCATATGG
ATGGATTTTTCTCTCATCACATGCGTGGGCGTTAGTGTTATTCATTAAAAGTAGTCCTCACCATGCACAGGCGGACGCCT
TGCATATAGACTGCGTGTGGCCGCATGTCCTAAAAATCCGCGTCGCTCTTGTATGCCTCAAAAGAAAGAAAAACCG---T
AGGTCGCCTCGTCCATTACCCACACAGTACAGTGTATCCGT-CCTAATATGGTTGTCTCTACACCCGGTGGGCACAGGCT
TGTCACCTACTCACGTGACGCCCGGTATGGCGGCCTCCCACTTGGCGCGTCGTGAGAGGCCAGCAGGAGGGCCATCCCAC
GAGCACAACCCATCGATCTTATCCGCAGCGGGGCCCACCTGCGCCCCCGCCAACGCTTTGCAACCCCGCAAAAGAGACAT
TTCAGTTTGGGCCCACCTGCATTCCCACAGAGCTCCGTAGACCAGGTTCACGGGG----------------AAAGGCCAA
GCCGCTCTATAAATAAGCTCCTGCTCGTCTCACTTGCGCTCTTCCCCTTCTCTCAGATCCGGAAACTTGGGGAGACTGGT
AGTGGGCTGTTCGGATCGGTCCATCCATCTCAGCGGCAGTCTGGTAATTGGGGACGAGGTAT--------------GGGC
CTCCTCGACAAGCTGTGGGACGACACCGTCGCGGGGCCCCAACCGGACACCGGTCTCGGCCGCCTCCGCAAACTCGCCGT
CCGCCCCGCCGCCGTCAAGATCAACGGTGACCGCTGCCCGCTAAAGATCGACATATTGTTAACCCTCGCCAGATCTTTGT
ACCATCAATCTGACCAGCTGTTTTGTTGTTGTTTTTTGTCGCGTTGGGT----CGTTCAGATGTGGCTCCGGGCGCCGCG
ATGGTGATCCCACCTACCACGCCGGCCGGCGGCGAGGATGCGCCGATGAAAGTCACGCGCAGCATCATGATTAAGCGGCC
GGCGGGGTACCCCTCGTCGCCGAGGAGCGCGGCCAGCACGCCGCCAGCCTCGCCGCTAGGATCCACGCCGCCCATCTCCC
CGTTCGCCGGCGGCGGTGAGCTCCCGTGCCCCTCATCCAACTTCTCGCATTA--ATTTTTTTTACGGTAGGGGCAGTTCG
GCCATTTCGTAGCCGCGTCCATGTGTGCGACGGGGAATGCCCGGGATGTGTAGGTTTCGTCTATGTGGCTTTTGTCCTGG
AGTTCGGAAGTGTCTAGACGGGGCTAGGGACATTTTGGACATTTCTGCCCGGGCAAGTGCTTTACCTCGCACGCCATGTA
GGATCGGATATGACGTAAAGTAGTTTCGGATAGGGAAGTGGGATCCTCTCCGCAAGGCGGGTGCTTGAAGAAAAAAAGTG
TGATTCGATGACAAAAGCTGAAAAAATTGGAGTGAAAAGTAGAGATGCATTTGTACTTAGAGTCCTTATTTTCTATTTCT
TAATGAGACCCACTAGTGATAGCTTGTATTAGAGAGAAAAAATTAATATAGATGCCTTAATTTACTTTTTGTCATGGGGC
ATATGTATCCATTTGTATCCATATGTTACCATTGTACATGCCCTTAGCTCTCGGGTCTTTCGTGGGATCATGACTGGATA
TCATCGTGTTCGATAAGTTACCATTTATGTGGTGTCTTTGAAATGCAGCGGCAACCGGATAAGTGTAGCTATCAGGCTGT
AAGGTTTGCCTTCCAAGAGAAAATAGCGACGCCTTTCTGTTTTCTGTTCGTAGAAGAACAAAAAATG---------GATC
TGTACCAGTATGGAGCTGCTTTATCTAGTA---CTCCTTGTGTGCGTGAAGTTGTCAATGGGGTGTTGGCCTAATTGAAG
CCAGCTCTCCCGACCCCACTTGACGTTGGATAGCGAAGCCAGCAATGGACCGTTCGTCAAGCCAAGAGCATAGACCTAGT
AGTAATACTATTTCTAATTGGTCACCAAGTCTCCAGAGTGCACACAAGAGTTCATACTT---------------------
--------------------------------------------------------------------------------
---------------------------------CTCCGTTCCAAAATACTTGGAAGTTCTAGGTT-GTCCCAAGACAATT
TTTTTTCAAGTTTGACCAAGTTTGTAGAAAAATATACCAAAATCTTCTACCTTT--------------------------
-------------ATACTTTATATATTTGACAGTGTAAATATTAGAAAACTTTTCTA-----------ACAGTTGGTTAA
GTTAGCCTTAAGACAAACCTACA-------------------------------------------------TATTGTGA
ATTTGTGTGCCGTGGGTGCAGTTAATTTACTTATGGATATGCTCTGGTTATACCTATGCTTACGAGGAACCTCTTTTTGT
TTGTATTTCTGTATGGAAACAGATACTTTGATGTTGAACAGGTTCTGGTATATTATTTTGCAGATCTGTGCTTGAGGTTG
AATCAGTTTATCTATCTTGGGTAAAATATTAC------------------------------------------------
-----------------------------------------------------------------------------GAC
TTAGACAGTGATGTGGTTGTAGATGATTTCAAGAAACAGGGATACTTGTACAATTAATCATCGTTCCGCTTTCCAAGTCC
ACAACTTCGTTTGACTTGTCAGATTCCTGTTGGAAGATTTACTTATTATCCCTTGTTGATGCTGTCTTTGTCTACTCAC-
--------TGACCAATTATGGAAGAGTTTGTAAGAATCACATGGTAGTGTGTGGGAAAACATGGATACATG---------
------------------------------GCATGCGGCATGGAATTTTTCATTTATTTGTATATTTAT----ATTCTAT
ATACATCATCTTTTGTGGTTCATTAATTAAATTCTTTTTCCACACAAACAAAATTAATTGTTCTTCTTTTTTGTTGAACT
AAATTAATTGTTCTTCTTACCTAAACTCGAACGGACTATGTTTACCAGGTGGTCGCTTCAGAAGGAAATCATCCTCGGAT
GCATACCAGAGGGCTACCA---CTGGGGCGTCGACCAGTCACCCTCCTCCCCCCTTTGAGGTGTGACTGCCCAGCGCGCT
CATGCTCCTTTTTGCTCCTCGGCCCGCTCTACTTCATGCAAGGCAGTGGAGGAGAAAGAGAAGACATATCATCGTTAGAG
AAATC-GAGAAACGCCGAGGATCTGCCGTACCTCTACTGTGATAGTATAATATAGATGAATGTGTAGTGTTTTGTTTCTA
CTATATATGCAGTGCACGCGTGTATGGTTATG----TGTAGAGAAGGCGTTGAAAGTTGCTGCTGCTGTGCTGTGTTAGT
AT-------------------------GTACGTACTTAGGTC---GCCCCTATGCTGGCACGCAGCTCCTCGTTTGTGTT
TTGCTGTTTTGCCTACTATGTTGTGGAGGCCTCGTCCTTCCATCACGTTCGTGTGTGGTGCGGATGAAAGCTGTAATGTT
AAGTAGGGGGGGCGAGATATGGTGTACGTAGTACGTGTAATTTTGTTTCATGGTGTTGTCTCAAGTAGTTCCTGGTGCTT
GCTTGAACTTTTATGTATTATCTTTGTGTGTTTGCCATGATAATCCCTAGTATTTTATCCTGCATGCTTACTCTCCGGAC
GCTGTCTGTTCTTAATAAATGTTGTAAATGGTCCATAATACCTGAGAGCAAATACTACTTGCCTCTGCTCTCGATGAAGA
ATTGAAGATTGCTCCTAGCACCGTGTCAGTGGCTGGTATTCCTATAGAAAACACGGAAGATTTAAATTGGGTCATCGAAA
GGTTTGAAGCAGGCACGACCTTTCGTTTGTAGGATCACATTGAGGCCTCGTTTGGTTTCAAGGGCCGATCATCCCAGGGC
TCTAATCCCCCTCGGGGGGATTTCCATGGCCTCTCCCACACCACGGGGAGATTACCATGCCAGTTTGGTAACAGGGGGGA
GGGGTGGAGATCACGTCCAGAAAGTGTAAACAAAATTGTAATATTCAGGATTCATGAAAATGACTCAGTTTCTTTACAGA
AACATCATACCAATTCAGAAGTAATCAAAATTTATGTATATTTCCTTGAAAAAAAAGAA
>chr4D_526
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------CTCTTCTACGCCTCAAAAATAAATAAATAAATCAT
AGGTCGCCTCGTCCATTACCCACACAGTACAGTGTATCCGTCCCTAATATGGTTGTCTCTACACCCGGGGTAGTA-----
------CTAGTCACGTGACGCCCGGTATGGCGGGCTCCCACCTGGCGCGTCGTGAGAGGCCAGCACGAGGGCCATCCCAC
GAGCACAACCCATCGATCTTATCCGCAGCGGGGCCCACCTGCGCCCCCGCCAACGCCTTGCAACCCCGCAAG-GAGACAT
TTCAGTCTGGGCCCACCTGCATTCCCACAGCGCTCCGTAGACCAGGTTCACGGGGCACAGTCTCCGGAGGGAAAGGCCAA
GCCGCTCTATAAATAAGCTCCTGCTCGTCTCACTTGCACTCTTCCCCTTCTCTCAGATCCGGAAACTTGGGGAGACTGGT
AGTTGGCTGTTGGGATCGGTCCATCCATCTCAGTGGCAGTCTGGTA--------------AT--------------GGGC
CTCCTCGACAAGCTGTGGGACGACACCGTCGCGGGGCCCCAACCGGACACCGGTCTCGGCCGCCTCCGCAAACTCGCCGC
CCGCCCCGCCGCCGTCAAGATCAACGGTGACCGCCGCCCGCTAAAAATCGACATATTGTTAACCCTCGCCAGATCTTTGT
ACCATCAATCTGACCAGCTGTTGTGTTGTTGTTTTTTGTCGCGTTGGGT----CGTTCAGATGTGGCTCCTGGCGCCGCG
ACGGTGATCCCACCTACCACGACGGCCGGCGGCGAGGATGCGCCGATGAAAGTCACGCGCAGCATCATGATTAAGCGGCC
GGCGGGGTACCCCTCGTCGCCGAGGAGCGCGGCCAGCACGCCGCCAGCCTCGCCGCTAGGAACCACGCCGCCCATCTCCC
CGTTCGCCGGCGGCGGTGAGTTCCCGTGCCCCTCATCCAACTTCTCACATTATTATTATTTTTACGGTAGGGGCAGTTCG
GCCATTTCGTAGCCGCGTCCATGTGTGCGACGGGGAATGCCCGGGATGGGTAGCTTTCGTCTATGTGGCTTTTGTCCTGG
AGTTCGGAAGGGTCTAGACGGGGCTAGGGACATTTTGGACATTTCTGCCCGGGCAAGTGCTTTAGCTCTCAGGTC-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------TCTTTCGTGGGATCATGACTGGATA
TCATCGTGTTCGATAAGTTACCATTTATGTGGTGCCTTTGTAATGCAGCAGCAACCGGATAAGTGTAACTATCAGGCTAT
AAGGTTTGCCTTCCAAGAGAAAATAGCGACGCCCTTCTGTTTTCTGTTCGTACAAGAACAAAAAATGGATACGTTTGATC
TGTACCAGTATGGAGCTGCTTTATCTAGCACTCCTCCTTGTGTGCGTGAAGTTGTCAATGGGGTGTTGGCCTAATTGAAG
CCAGCTCTCCCGACCCCACTTGACGTTGGATGGCGAAGCCAGCAATGGACCGTTCGTCAAACCAAGAGCATAGATCC---
AGTAATACTATTTCTAATTGGCCACCAAGTCTCCAGAGTGTACACAAGAGTTCATACTCCCTCCGTTCCAAAATATATAT
AGTACTAACTTTTAGAATAGATGACTCAACTTTGTACTAACTTTAGTGAAGTTAGTACAAAGTTGAGTCATCTATTTTAG
AACAGAGGGAGTACTTTTGAAGGAACATACTCCCTCCG--------------GAACTTGTACGTTTGTCCTAAGACAAAT
TTCTTT-AAGTTTGACCAATTTTGTTGAAAAATATACCAAAATCTACAATACCAAATTAGCTTCATTAGATTAGTATAAT
GACATATATTTTCATACTATATATATTGGAGAGTGTAAATATAAAGACACTTTTCTGTAAAGTTGTTTAAACTTAGAGAA
GTTTGACTTAGGATGAACCTATAACTTAAAGTATTTTGGAGCGAAGCAGTAT---TGAAAATCTGATATGCATATCGTGA
ATTTGTGCGCCGTGGGTGCAGTTAATTGACTTATGCATATGCTTTGGTTATACCTTCGCTCATGAGGAACCTCTTTTTGT
ATGTATTTCTGTATGGAAATAGATACTTTGATGTGGGACAGGTTCTAGTATATTATTTTGCAGTTCTTTGCTTGATGCTG
AATCAGTTGATCTATCTTGGGTAAAATATTAC------------------------------------------------
-----------------------------------------------------------------------------GAG
TTAGACAGTGATGGGGTTGTAGATGATTTCAAGAAACAGGGATACTTGTACAATTAATCATCGTTCCGTTTTCCAAGTCC
ACAACTTCGTTTGATTTGTCAGATTCCTGTTGGAAGATTTACTTATTATCCCTTGTTGATGCTGTCTTTGTCTACTCTCT
TGTATCAGTGACCAATTATCGATGAGTTTGTAAGAATCACATGGTAGTGTGTAGGAAAACATGGATACCTGGCTAGTAGT
ACATGGACGATTCCCCTCACTATATGAAATGCATGCGGCATGGAATTGTTCATTCATTTGAACTA-TATTTATATTCTGG
AGACTT-ATCTTTTGTGGTTCATT--------------------------------------------------------
-AATTAATTGTTCTTCTTACCTAAACTCGAACGGACTATGTCTACCAGGTGGTCGGTTCAGAAGGAAATCATCCTCGGAT
GCGTACGAGAGGGCTACACCACCTGGGGCGTCGACCAGTCACCCTCCTCCACCCTTTGAAGTGTGACTGCCCAGCGCGCT
CATGCTCGTTTTTGCTCCTCGGCCCGCTCTACTTAATGCAAGCCCGAGGAGGAAGAGAGGACGTATC---------AGAG
AAATCTGAGAAACGCCAAGGGTCTGCCTTTCCTCTACTGTGATAGTATAATATAGATGAATGTGTAGTGTTCTGTTTTTA
CTATATATGCAGTGCACGCGTGTATGGTTATGTATGTGTAGAGAAGGTGTTGAAAGTTGCTGCTGCTGTGCTGTGCTGTG
CTGTGTTAGTATGTACTTGCTGTGTTAGTATGTACTTAGGTCGTCACCCCTGGGCTGGCACGCAGCTCCTCGTTTGTGTT
TTGT--------CTACTATGTTGTGGAGGCCTCGTCCTTCCATCACGTTCGTGTGTGCTGCGGATGGAAGCTGTAATGTT
AAGTAGGGGGGT-GAGATACGGTGTACGTAGTACGTGTAATTTTGCTTGATGGTGTTATCTCGAGTAGTTCTCGGTGTTT
GCTTGAACTTTTCAGTATTATCTTCGTGTGTTTGCCATGATAATCCCTAGTACTTTCTTCTGCACAGTTACTCTCCGGAC
GCTGTCTGTTCTAAATAAATGTTGTAAATGGTCCGTAACATCTGAGAGTGAATACTACTTGCCTCTGCTCTCAATGA---
-----AGATTGCTCCTAGCACCGTGTCAGTGGCTGGTATTCCTATGTAAAACAC--AAGATTTAAATTGGGGCATCGAAA
GGTTTGAACTAGGCACGACCGTCCGTTCGTAGGATCGCATTG--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------
>chr4B_611
--------------------------------------------------------------------------------
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------------------------------------------------------GTCCCTACATCGGGTGGGCACAGGCT
TGTCATACTC-------ACGCCCGGTATGGCGGCCTCCCACCTGGCGCGTTGTGAGAGGCCAGCACGAGGGCCATCCCAC
GAGCACAACCCATCGATCTTATCCGCAGCGGGGCCCACCTGCGCCCCCGCCAACGCCTTGCAACCCCGCAAG-GAGACAT
TTCAGTATGGGCCCAGCTGCATTCCCACAGCGCTCCGTAGACCAGGTTCACGGGGCACAGTCTCTTGAGGGAAAGGCCAA
GCCGCTCTATAAATAAGCTCCTGCTCGTCTCACTTGCACTCTTCCCCTTCTCTCAGATCCGAAAACTCGGGGAGACTGGT
AGTTGGCTGTTCGGATCGGTCCATCCATCTCAGTGGCAGTCTGGTA--------------ATTGGGGACGAGGTATGGGC
CTCCTCGACAAGTTGTGGGACGACACCGTCGCGGGGCCCCAACCGGACACCGGCCTCGGCCGCCTCCGCAAACTCGCCGC
CCGCCCCGCCGCCGTCAAGATCAACGGTGACCGCTGCCCGCTAAAACTCGACATATTGTTAACCCCCGCCAGATCTTTGT
ACCATCAATCTGACCAACTGTTGTGTTGTCGTTTTTTGTCGCGTTGGGTCTCCCGTTCAGATGTGGCTCCGGGCGCCGCG
ACGGTGATCCCACATACGACGCCGGCCGGCGGCGAGGATGCGCCGATGAAAGTCACACGCAGCATCATGATTAAGCGGCC
GGCGGGGTACCCCTCGTCGCCGAGGAGCGCGGCCAGCACGCCGCCAGCCTCGCCGCTAGGATCCACGCCGCCCATCTCCC
CGTTCGCGGGCGGCGGTGAGTTCCCGTGCCCCTCATCCAACTTCTCGCATTAATATT-TTTTTACGGTAGGGGCAGTTCG
GCCATTTCGTAGCCGCGTCCATGTGTGCGACGGGGAATGCCCCGG-----------------ATGTGGCTTTTGTGCTGG
AGTTCGGAAGGGTCTAGACGGGGCTAGGGACATTTTGGACATTTCTGCCCGGGCAAGTGCTTTAGCTCTCGGGTC-----
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------------TCTTTCGTGGGATCATGGCTGGATA
TCATCGTGTTCGATAAGTTACCATTTATGTGGTGCCTTTGAAATGCAGCAGCAACCGGATAAGTGTAACTATCAGTCTGT
AAGGTTTGCCTTCCAAGAGAAAATAGCGACGCCCTTCTGTTTTCTGTTCGTAGAAGAACAAAAAATGGATAAGTTTGATC
TGTACCAGTATGGAGCTGCTTCATCTAGTA---CTCCTTGTGTGCGTGAAGTTGTCAATGGGGTGTTGGCCTAATTGAAG
CCAGCTCTCCCGACCCCACTTGACGTTGGATAGCGAAGCCAGCAATGGA--------CAAACCAAGAGCATAGATCC---
AGTAATACTATTTCTAATTGGCCACCAAGTCTCCAG--TGTACACAAGAGTTCATA------------------------
--------------------------------------------------------------------------------
-----------TACTTTTGAAGGAACATACCCCCTCCGTTCCAAAATACTTCGAACTTCTACGTTTGTCCTAAGGCAAAT
TTCTGT-AAGTTTGACCAATTTTGTTGAAAAATATACCAAAATCTACAATACCAAATTAGCTTCATTAGATTAGTA--AT
GACATATATTTTCATACTATATATATTTGAGAGTGTAAATATAAAGAAACTTTTCTATAAAGTTGTTTAAATTTAGAGAA
GTTTGACTTAGGATGAATCTATAACT--AAGTATTTTGGAGCAAAGGCAGTATTATGAAAATCTGATATGTATATTGTGA
ATTTGTGCGCCGTGGGTGCAGTTAATTGACTTAGTCATATGCTTTGGTTATACCTTCGCTTACAAGGAACCTCT--TTGT
ATGTATTTCTGTATGGAAACAGATACTTTGATGTGGAACAGGTTCTAGTATATAATTTTGCAGTTCTTTGCTTGAGGCTG
AATCAGTTGATCTATCTTGGGTAAAATATTACTCCCTCCGTCCCAAAATTCATGTCTTAGATTTGTCTAGATACGGATGT
ATCTAATACTAAGACATGACTTGATACATCCATATTTAGACAAATGTAAGACACGAATTTTGGGACGGAGGGAGTACGAG
TTAGACAGTGATGAGGTTGTAGATGATTTCAAGAAACAGGGATACTTGTACAATTAATCATCGTTCCGTTTTCCAAGTCT
ACAACTTTGTTTGATTTGTCAGGTTCCTGTTGGAAGATTTACTTATTATCCCTTGTTGATGCTGTCTTTGTCTACTCTCT
TGAATCGGTCACCAATTATCGATGAGTTTGTAAGAATCACATGGTAGTATGTGGGAAAACATGGAT------CTAGTAGT
ACATAGACGATTCCCCTCACTATATGAAATGCATGCGGCATGGAAATGTTAATTCATTTGTATATTTATTTATATTCTGG
AGACGTCATCTTTTGTGGTTCATT--------------------------------------------------------
-AATTAATTGTTCTTCTTACCTAAACTCGCACGGACTATGTCTACCAGGTGGTCGCTTCAGAAGGAAATCATCATCAGAT
GCGTACGAGAGGGCTACACCACCTGGGGCGTCGACCAGTCACCCTCCTCCACCCTTTGAAGTGTAACTGACCAGCACGCT
CATGCTCGTTTTTGCTCCTCT-CCCGCTCTACTTAATGCAAGCCCGAGGAGGAAGAGAGGACGTATC---------AGAG
AAATC-GAGAAACGCCAAGGATCTGCCTTTCCTCTACTGTGATAGTATAATATAGATGAATGTGTAGTGTTCTGTTTCTA
CTATATATGCAGTGCATGCGTGTATGGTT----ATGTGTAGAGAAGGTGTTGAAAGTTGCTGCTGCTGTGCTGTG-----
-------------------CTGTGTTAGTATGTACTTAGGTC---ACCCCTGGGCTGGCACGCAGCTCCTCGTTTGTGTT
TTGT--------CTACTATGTTGTGGAGGCCTCGTCCTTCCATCACGTTCGTGTGTGGTGCGGATGGAAGCTGTAATGTT
AAGTAGGGGGAT-GAGATACGGTGTACGTAATATGTGTAATTTTGCTTGATGGTGTTATCTCGAGTAGTTCCCGGTGTTT
GCTTGAACTTTTCAGTATTATCTTCGTGTGTTTGCCATGATAATCCCTAGTACTTTCGTCTGCACAGTTACTCTCTGGAC
GCTGTTTGTTCTAAATAAATCTTGTAAATGGTCCGTAACATCTGAGAGTGAATACTACTTGCCTCTGCTCTCAATGA---
-----AGATTGCTCCTAACACCGTGTCAGTGGCTGGTATTCCTATGTAAAACACATAAGATTTAAATTGGGGCATCGAAA
GGTTTGAACTAGACACGACCGTCCGTTCGTAGGATCGCATTG--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----S--S---------SS--SS---SSSS----
--------------------------------------------------------------------------------
-----S-----------------------------------S-----------------------S--------------
--------------------------------------------------------S--------------SS-------
------S-----------------------S-------------------------------------------------
-------------------------------------S------------------------------------------
---S-----------------------------S------------SSSSSSSSSSSSSS--------------------
-------------------------------------------------------------------------------S
---------------------------------------------S----------------------------------
----------------------S---------------------------------------------------------
-S------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------S------------------------------------S----------------------
------------------------------------------------S----S--------------------------
----------S-----------------------------------------------------S---S--S-S-SSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------------------
----------------------------------S--------------S-----------------S------------
---------------------------------S----------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------S-------------S-SSSS
---------------------S------------------S-----------------S---------------------
--------------------------------------------------------------------------------
---------------------------------------------------S---S-----S--------S-------S-
--S---S------------S-----S-------------------S-S-SSSSS--------------------------
------------------S-----------S-----------S-SS-----------------------S-S--S-SS--
---S-S----S--SS------S----------------------------------------------------------
-------S-------------------S-------S-------S-----------SS-----------------------
S---------------------------------S-----------S----------------S---S---------S--
--------S-----------------------------------------------------------------------
-------------------------------------------------------------------------------S
-------------S------------------------------------------------------S-----------
--------------S--------------------------------------------------------------S--
-------------------S--S---------------------------------------------S-----------
-----------------------------------------------S------S-----------------------SS
-S--S-------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
S----------------------------------------S--------------------------------------
--S---S----------SS-------------------------------S--------S--------------------
-------S--------------------------S-------S-S-S------SS-SSS--S-SSSSSSSSSSSSS----
----------------S----------S-S-----------------------------------------S--------
-----------------------------------------------S---------------------------S-SSS
S-----------------------------S--------------S-----SS---------------------------
---SSSSSSSSS------------------------------------------------------S-------------
-----------SS------S-------------------------S--S--------S----S---------S----S--
------------SS----------S---------------------------S---S-S-----SSS-------------
------------S---------------------S---S-S-------SS----------------------S----SSS
SSSSS----------------------------------------SS-------SS---------------S--------
--------SS----------S-S----S--------S-----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_339
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------A
GTGGGGTCTATCTGGCCAT-------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------
>reverse_1712
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------AGGGAAGTGGGATCCTCTCC-----------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------
>forward_503
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---ATATAGACTGCGTGTGGCCG---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------
>reverse_1972
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------CGGGTCTTTCGTGGGATCAT---------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------
>forward_1731
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------AGGGAAGTGGGATCCTCTCC-----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------
>reverse_3888
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------CGTTGAAAGTTGCTGCTGCT-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------
