>input_sequence_36248
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-------------------------ATGGGGGACGACCATGGCGCCAAGCTGGTGAAGAGCCTGCGGGGCGCGGCGCAGA
AGTACGTCGGCGTGGGGTTCTTCCTCGGCTTCTTCCTCGTCCTCCTCACCTACTTCACCCTCTCCGAGCAGTTCGCCATC
GCCGCGCCCAACGGTGCGTCTCGTCCTCATCGATGAGTTCTTGCTTGCTCCGCCAT-GGTTGTTTTCTTTGTGTTCATTT
--------------------------------TTGTTGCACGCTTTATCGGGGCAAGCAAGCATGTGATTCATTCACCTC
AAAAGCTGCAATTTCTTTCGGCCCAAAGAATTACTGTTTTCTTGTTCAGGGGACCTTTACTTGAACATCTTTTGCATGTT
TATTACTACTTGTGAATACAAGACTTGGTCAAAGCATGGACATGTTCTTGCCTTGCCTGTTCTTGAATCATCAACTTGAA
CCACAGTCCAACTCATCAAGCTCTCGGTTTTGAAACTGATGAGAATTCGGCTCAAAATTGCAGCTATCCGGAGGACCTCG
GCGGCGCACCCGACGCCGACCACCCCGGCCGTGGCAGAGAAGACGGTGCAGCAGCA---ACAGCTCCCCGTCAAAAGTAA
CTAAACCAGCTCCCCG----TTCTCCTGATCATCAAAATTCAACCAGATT---------TTTTGGGTCCTGACCATGTAT
GTGATGTGTTGTGTTGCATGGAACAGAGGAGGAAGCACCTCTGCCAGAGCATGAACAAGTACAAGAGAAGCCACCACCTG
TCGACGAGGAGCCCCACAGAGAAACAGAGGAGCCCAACTCAGAAACAGAGGAGGACCCCAAGCCCATCGGTACGTCTTCG
G-----TCTTCCAAATACATCGATATCAAGAGAAAAGTCGACAAGTTTCGATTGGATCTCAGGCCAATCAATCTAAAGAA
CTCACTTTTGAGATCGGGGACGTGTCTGTCCGGTGCAAACTTTGCTCCGTCACAATTCCACCGAGA------------GA
AAAATGATGAAGTAATGATGTTTCATGCCTATCCATGCATGCAGATGAGGCTAGCAAGATCGTGACCACCGCGGAGGAGA
GCGCGCCGGCGAAGAAGCCGGCGTGCGACATCCAGGGGCCGTGGGCGTCCGACGTCTGCGACCTCGCCGGCGGCAGCGGC
GGCGTGCGCATCCACGGCTCGACCCACACGGTGCTCGTCCCGCCCACCATCGAGTCCGGTGGCAGCAACCCCAACCCGCA
GGAGTGGCGCGTGCTGCCCTACTCCCGGAAGCACATGTCCGGCATCAAGGAGATCACCGTGCGCGAGCTGCCCACGGCGG
CCGACGCGCCCCGCTGCGCCGTCACCTCGCAGGTCCCCGCGCTCGTCTTCGCCATGGGCGGCCTCACGGGAAACTACTGG
CACGACTTCAGCGACGTCATGATCCCGCTCTACCTCCAGGCGTCCCGCTTCGACGGCGAGGTGCAGCTCGTGGTCACCAA
CATCCAGCCATGGTACGCCGGCAAGTACCGCCACATCATCGCCCGGCTCTCCCGGTACGACGTCGTGGACATGGACAAGG
ACGACCAGGTGCGCTGCTTCCCCAGCGCCGTCGTCGGCATCCGCATGCACAAGGAGTTCAGCATCGACCCCACCAAGGAG
CCCACGGGCCACTCCATGCCCGAGTTCACCAAGTTCCTCCGCAACGTCTTCGCGCTCCCGCGCGCCGCGCCGATGAGGGT
CACCGCCGGG------AGCGACAAGAAGCCGAGGATGATGATCATCTCCCGGCGCCACCCGAGGAAGCTGGTCAACGTGG
CGGAGGTGGTGGCGCTGGCCAAGCGGATCGGGTTCGAGGTGGTGATCGGGGACCCGCCGTTCAACGTGGACGTGGGCGAC
TTCGCGCGGGAGGTGAACGCCGCCGACGTGCTCATGGGGGTGCACGGCGCCGGCCTCACCAACTCGCTCTTCCTGCCGAC
GGGGGCGGTGTTCATCCAGGTGAACCCCTTCGGCAAGATGGAGCACATCGGGGAGGTGGACTTCGGGACGCCGGCGGTGG
ACATGGGGCTCAAGTACATGGCCTACTCGTGCGGCATGGAGGAGAGCACGCTGGTGGACACGCTCGGGCGCGACCACCCG
GCGGTCAAGGACCCGGAGTCGATCCACCGCAGCGGGTGGAGCAAGGTGGCGGAGTACTACCTCGGCAAGCAGGACGTGAA
GCTCGACCTCCAGCGGTTCGAGCCGGTGCTCCTCAAGGCCATGGCCATGCTCAGAGAGTAG-------------------
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------------------------------------
>chr3D_1_TraesCS3D01G024500
CAGAACTCCTCCTCCCTCCTCTGATCTCCCCATGAATCTCTACTTGTAGCTCGAATTGGTGTTAATGGAGGATAGTTGCG
GGTAATTGTTGTGGAGCCCTAACAAGATATTACAAAAAGAATGGGCAGAAGAAAGAAATGGGGGAAGAAAGAGAGAGAGA
GAGAGAGAGTGTGTGCCTGCAAGAAAAGCATATTGTAGGTTCAAAAAAG------ATTAGGCAGGAGGTGGGCCGGCCGT
GGATGGCATACCCTGACAAGTCATGACTGAAACATCCAAATTCTTCCAATCAGATAGGCCACATGTTTGACCAAGTTAGA
TCAAC--------------CACCTCACGTTCACATAATCATCT--------TCAATCAATCAGTGCCTTAGGGATGGATG
GAGTGGAACATGACCTCGTTTTTCTTCCATCCCCTCTCCTATGCCAATGTCACCC-CCATGCCCTACTCAATCATGAGCC
AACT-GCTCCCATAATGGCTAGCCAAAACAGGGCATAACCCCAGTATACTAA-------TTAGTTCGATCTGGAAGAACT
TTCTGCCTACTTGTGATTATTTAGCTGTAATATTTCTTCTTACTTC---TTACA--GTAACCAAACATTGGTTACATACT
AGTCATACAACAGAGAGCATACATATACGAATGAAAGCACAGCTAAGATATGTACTGTACTGCA---------TAATTAA
TCAATTTGCAGACGTAGCAATCAGGAGGAGGAGGAGGAGGAGGAGGGCGAGTTGCTTGGGCAATTTGGCAAGGTCCTCTT
CCCTTCACCTGACGTGGGCGGCCATAAAGTCCATTAT--TCCTCGCAA----AGAGATAGAGAGCGAACTGGTCCGTGTG
GAGGTGTTCTTGGAAGGTTCTCCCGCGTCAGGGAGTAGTTGGCGCCATCGCCGTTACCTTCTTTAGCTAAGCTA------
TAGGACACCCGCACACGCGCATACATACACGAGAAAGAGAAAGAGAAAGGATTCACTCACGGGAGGGAGAGGAGGAAGAA
GAGATAGGGGGAGAGATCGAT--CGATGGGGGACGACCATGGCGCCAAGCTGGTGAAGAGCCTGCGGGGCGCGGCGCAGA
AGTACGTCGGCGTGGGGTTCTTCCTCGGCTTCTTCCTCGTCCTCCTCACCTACTTCACCCTCTCCGAGCAGTTCGCCATC
GCCGCGCCCAACGGTGCGTCTCGTCCTCATCGATGAGTTCTTGCTTGCTCCGCCAT-GGTTGTTTTCTTTGTGTTCATTT
--------------------------------TTGTTGCACGCTTTATCGGGGCAAGCAAGCATGTGATTCATTCACCTC
AAAAGCTGCAATTTCTTTCGGCCCAAAGAATTACTGTTTTCTTGTTCAGGGGACCTTTACTTGAACATCTTTTGCATGTT
TATTACTACTTGTGAATACAAGACTTGGTCAAAGCATGGACATGTTCTTGCCTTGCCTGTTCTTGAATCATCAACTTGAA
CCACAGTCCAACTCATCAAGCTCTCGGTTTTGAAACTGATGAGAATTCGGCTCAAAATTGCAGCTATCCGGAGGACCTCG
GCGGCGCACCCGACGCCGACCACCCCGGCCGTGGCAGAGAAGACGGTGCAGCAGCA---ACAGCTCCCCGTCAAAAGTAA
CTAAACCAGCTCCCCG----TTCTCCTGATCATCAAAATTCAACCAGATT---------TTTTGGGTCCTGACCATGTAT
GTGATGTGTTGTGTTGCATGGAACAGAGGAGGAAGCACCTCTGCCAGAGCATGAACAAGTACAAGAGAAGCCACCACCTG
TCGACGAGGAGCCCCACAGAGAAACAGAGGAGCCCAACTCAGAAACAGAGGAGGACCCCAAGCCCATCGGTACGTCTTCG
G-----TCTTCCAAATACATCGATATCAAGAGAAAAGTCGACAAGTTTCGATTGGATCTCAGGCCAATCAATCTAAAGAA
CTCACTTTTGAGATCGGGGACGTGTCTGTCCGGTGCAAACTTTGCTCCGTCACAATTCCACCGAGA------------GA
AAAATGATGAAGTAATGATGTTTCATGCCTATCCATGCATGCAGATGAGGCTAGCAAGATCGTGACCACCGCGGAGGAGA
GCGCGCCGGCGAAGAAGCCGGCGTGCGACATCCAGGGGCCGTGGGCGTCCGACGTCTGCGACCTCGCCGGCGGCAGCGGC
GGCGTGCGCATCCACGGCTCGACCCACACGGTGCTCGTCCCGCCCACCATCGAGTCCGGTGGCAGCAACCCCAACCCGCA
GGAGTGGCGCGTGCTGCCCTACTCCCGGAAGCACATGTCCGGCATCAAGGAGATCACCGTGCGCGAGCTGCCCACGGCGG
CCGACGCGCCCCGCTGCGCCGTCACCTCGCAGGTCCCCGCGCTCGTCTTCGCCATGGGCGGCCTCACGGGAAACTACTGG
CACGACTTCAGCGACGTCATGATCCCGCTCTACCTCCAGGCGTCCCGCTTCGACGGCGAGGTGCAGCTCGTGGTCACCAA
CATCCAGCCATGGTACGCCGGCAAGTACCGCCACATCATCGCCCGGCTCTCCCGGTACGACGTCGTGGACATGGACAAGG
ACGACCAGGTGCGCTGCTTCCCCAGCGCCGTCGTCGGCATCCGCATGCACAAGGAGTTCAGCATCGACCCCACCAAGGAG
CCCACGGGCCACTCCATGCCCGAGTTCACCAAGTTCCTCCGCAACGTCTTCGCGCTCCCGCGCGCCGCGCCGATGAGGGT
CACCGCCGGG------AGCGACAAGAAGCCGAGGATGATGATCATCTCCCGGCGCCACCCGAGGAAGCTGGTCAACGTGG
CGGAGGTGGTGGCGCTGGCCAAGCGGATCGGGTTCGAGGTGGTGATCGGGGACCCGCCGTTCAACGTGGACGTGGGCGAC
TTCGCGCGGGAGGTGAACGCCGCCGACGTGCTCATGGGGGTGCACGGCGCCGGCCTCACCAACTCGCTCTTCCTGCCGAC
GGGGGCGGTGTTCATCCAGGTGAACCCCTTCGGCAAGATGGAGCACATCGGGGAGGTGGACTTCGGGACGCCGGCGGTGG
ACATGGGGCTCAAGTACATGGCCTACTCGTGCGGCATGGAGGAGAGCACGCTGGTGGACACGCTCGGGCGCGACCACCCG
GCGGTCAAGGACCCGGAGTCGATCCACCGCAGCGGGTGGAGCAAGGTGGCGGAGTACTACCTCGGCAAGCAGGACGTGAA
GCTCGACCTCCAGCGGTTCGAGCCGGTGCTCCTCAAGGCCATGGCCATGCTCAGAGAGTAGCCGCTCC----GATCGAGC
TTGCAGCCCCGGCGCATTGGT-------TGATTCGCACTAGCGTAGAGCAGTTCCATTTCTTCTAATTTATTCCTATTAA
TTTACATATTTTTTGGGTGGATATATATTGATCAAAACGGTTATAC----AGTATATATGTGTTACACTGATCGATCGAC
AGAGCAATACAAAATATTGATCATATATAGTGCCATCATAAACTACCTCTCCAATTTTAAAAAACGAAACCATCCAGAAC
TGGCTCTTGAAGGCATATTTTTATGAAAAAAACTCTAACCACCACGCGCTAATCCATGTCTCGAGCGTGGGTAGGCTAGC
TAGCTCCGGCAATGCTACACACACGGACAGTTTTTAGCCGCTAGCCAATATGGTGACACCCTGTTCTCATCTCTTCAATT
TTAAACTAGAGTAAATTTACGAAAATACTAAAAAACAGACTTCAAATTTTTAGGCATGGCAAATTTGAAGTTTTTATATT
GGCGCGACGATAGTAAATTTAGTGTGCAAGCACGGCAATTTTCTGACAGAAAAATGAACTGAGGCAGATTTGTCATGCTC
GTCAACTAAACATGCCATCCTCGGAGAACATAATTTTTCATGAAAACATTTGATTTGCCATGGTAAAAAATCTGACGTCA
AATTTGTAGTCGAGTCCAAAATTTGAGATGGGCCTAAAGTAACAGGAACCGTTAATTCTCTTAGATACAACATATGCCAT
GTTACTATTTATCTCGTATAATGCTAGCCATTATAGGATTAGTTTGGCTTATGATTAAAGTAGGGCATGGGGTGGCACAG
GAGAGGGAGAGGAAAGAAAAACGAGGTCATGTTAGATCCCTTGATTGAGTGATTGAATATAATGTGAGATGGTTGATCCA
ACTAGGTCAAACCTGTGGAATATATGATCAAAAGAATTTGGATGTTTCAGTTGAAAACTAGTTCATCATGAGTTGTCTGG
GATGTCATCTAGGGCCCACCTCCTGCTTAATCCCAA
>chr3B_105
AGATAGTACG----------------------------------------------------------------------
----------------------------------AAAAGAATGGGCAGAAAAAGGAAATGGAGGAAGAAAGAAAAGGA--
-------AGTATGTGCCTGCAAGAAAAGCATATTGCAATGCTTTGCAAGTTATGAATTAGGCAGGGGGTGGGCCC----T
GGATGACACACCCTGACAACTCATGACTGAAACATCCAAATTCTTCCAATCAGATATTCCACGGGTTTG-----------
---ACCTGGTTGGATCAACCACCTCACCTCCATAT------------TCAATCAATCAATCAGTACCTTAGGGATGGT--
---TGGAACATGACCTCGTTTTCCTTCCATCCCCTCTCCTATGCCACCCCCCATGGCCATGCCCTACTCAATCATGAGCC
AAACCGCTCCCATGATGGCTAGCCAAAACATGGCATCGCCCCAGTATACTACTACCAATTTAGTTTGATCTGGAGGAACT
TTCTGCCTACTTCTGATTTTTTAACTGCAATACTTGTTCTTACTTCTTTTTACA--GTAATCAAACATTGGTAACATACT
AGTTATACAAC--------------------TGAGAGCACAGCTAAGATATGTA-----CTGCA---------TAATTAA
TCAATTTGCAGACGTAGCAATCAGGAGGT-------------GAGGGAGAGTTGCTTGGGCAATTTGGCAAGGTCTTCCT
CCTTTGCTCTGACGTGGGCGGCCATAAAGTCCATTATATTCCTCACAA----AGAGAGG----GCGAACTGGTCCGTGTG
GAGGTGTTCTTGGAAGGTTCTCCCGCGTCAGGGAGTAGTTGGCGCCATCACCGTTACCTTCTTTAGCTAGCTAGCTA-GC
TAGGACACCTGCACACGCGCATACATACACGAGAAAGAGAAAGAGAAAAGGTTCACTCACGGGAGGAGGAGGAAGAAGAA
--GATAGGGGGAGAGATAGAT--CGATGGGGGACGACCATGGCGCCAAGCTGGTGAAGAGCCTGCGGGGCGCGGCGCAGA
AGTACGTCGGCGTCGGCTTCTTCCTCGGCTTCTTCCTCGTCCTCCTCACCTACTTCACCCTCTCCGAGCAGTTCGCCATC
GCCGCGCCCAACGGTGCGTCTCGCCCGCC----TGAATTCTCACTTGCTTTTCCATGGGTTCATTTCATTGTGTTCACCT
TTTTTTTTGAGCAAAATTTATTTTTGTTCTCCTTGCTGCATGCTTTATCGGGGCAAGCAAGCATCTGTG--ATTCACCTC
AAAAGCTGCGATTTGTTTAGGCCCAAAGAATTGCTGTGTTAGTTTTGTTGT--CCTTTATTTGAACAACTTTTGAATGTT
TATGAACG----------CAAGACTTGGTCAAAGTATGGACATGTTCTTGCCTGTTCTTGGTTATCTGAATTTAAGGACA
TAGTCAGGGCACCGGTCACCAACCTGAAACTGAAACTGATGAGAATTTGGCTTAAAATTGCAGCTATCCGAAGGACCTCA
GCGGCGCACCCGACGCCGACCGCCCCGGCCGTGGCAGAGAAGACGGTGCAGCAGCAGCAGCAGCTCCCCGTCAAAAGTAA
GTAAACCAGCTCCCCGGCCGTTCTCCTGATGAACGAAATTCAGCCGGATTTTCTT----------GTTCTGACCATGTAT
GTGTTGTGTTGTGTTGCATGGAACAGAGGAGGAAGCACCTCTGCCGGAGCATGAACAAGTACAAGAGAAGCCACCGCCTG
TCGACGAGGAGCCCCACACAGAAACAGAGGAGCCCCACTCAGAGACAGAGGAGGACCAGAAACCCATCGGTAGGTAGTTG
CTAACCTCTTCCAAATACATCGATGTCAAGAGAAAAGTCGACA-GTTTCGATTGGATCTCCGGCCAATCAATCTAAAGAA
AGAGCTTTTGGAGCCGGGGACGTGTCTG-CCGGTGCAAACTTTGCTCCGTCAGAATTCCACTGAACCTGAACTGAATGGA
AAAATGATGAAGTAATGATAGTTTGATGCTT---ATCCATGCAGATGACGCTACCAAGATCGTGACGACGGCGGAGGAGA
GCGCGCCGGCGAAGAAGCCGGCGTGCGACATCCAGGGGCCCTGGGCGTCCGACGTCTGCGACCTCGCCGGCGGCAGCGGC
GGCGTGCGCATCCACGGCTCCACGCATACGGTGCTCGTCCCGCCCACCATCGAGTCCGGCGGCAGCAACCCCAACCCGCA
GGAGTGGCGCGTGCTGCCCTACTCCCGGAAGCACATGTCCGGCATCAAGGAGATCACCGTGCGCGAGCTGCCCACGGCGG
CCGACGCGCCCCGCTGCGCCGTCACCTCGCAGGTCCCCGCGCTCGTATTCGCCATGGGCGGCCTCACGGGCAACTACTGG
CACGACTTCAGCGACGTCATGATCCCGCTCTACCTCCAGGCCTCCCGCTTCGACGGCGAGGTGCAGCTCGTGGTCACCAA
CATCCAGCCATGGTACGCCGGCAAGTACCGCCACATCATCGCCCGCCTCTCGCGGTACGACGTGGTGGACATGGACAAGG
ACGACCAGGTGCGCTGCTTCCCGTCCGCCATCGTCGGCATCCGCATGCACAAGGAGTTCAGCATCGACCCGGCCAAGGAG
CCCACGGGCCACTCCATGCCGGAGTTCACCAAGTTCCTCCGCAACGTCTTCGCGCTCCCGCGCGCCGCGCCCATGCGGGT
CACCGCCGGGCTTATAAGCGACAAGAAGCCGAGGATGATGATCATCTCCCGGCGCCACCCGAGGAAGCTGGTGAACGTGG
CGGAGGTGGTGGCGCTGGCCAAGCGGATCGGGTTCGAGGTGGTGATCGGGGACCCGCCGTTCAACGTGGACGTGGGCGAC
TTCGCGCGGGAGGTGAACGCCGCCGACGTGCTCATGGGGGTGCACGGCGCCGGGCTCACCAACTCGCTCTTCCTGCCGAC
GGGGGCGGTGTTCATCCAGGTGAACCCGTTCGGCAAGATGGAGCACATCGGGGAGGTGGACTTCGGGACGCCGGCGGTGG
ACATGGGGCTCAAGTACATGGCCTACTCATGCGGCATGGAGGAGAGCACGCTGGTGGACACGCTGGGGCGCGACCACCCG
GCGGTCAAGGACCCGGAGTCGATCCACCGCAGCGGGTGGAGCAAGGTGGCGGAGTACTACCTCGGCAAGCAGGACGTGAA
GCTCGACCTCCAGCGGTTCGAGCCCGTGCTCCTCAAGGCCATGGCCATGCTCAGAGAGTAGACGCTCCCTCCGATCAATC
TTGCAGCCTACACACATTGGTT----GCTCATACGCACTAGCATAGAGCTGTTCCATTTCTTCTAATTTATTCCTATTAA
TTTACATATTTTTTTGTGGATGAAC---TGATCAAAAGGTTTATACAGCAAGTATATATGTGTTCCACTGATCCATCCAG
GGAGCAACACGAATTCTTGAT----TATGGTGACATCATCAACAATCTCTCCTAAT------------------------
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>chr3A_129
--------------------------------------------------------------------------------
------------------------------------------------AAGAATGAAATGGAGGAAGAAAGAAAAGGA--
-------AGTATGTGCCCGCAAGAAACGCATATTGTAATGCTTTGCAAGTTATGAATTAGGCAGGGGGTGGGCCC----T
GGATGGCATACCCTGACAACTCATGACTGAAACATCCAAATTCTTCCAATCAGATATTCCACGGGTTTG-----------
---AC--------------CACCTCACGTTCACATAATCATATTCAATCAATCAATCAATCAGTTCCTTAGGGATGAT--
---TGGAACATGACCTCGTTTTTCTTCCACCCCCTCTCCTATGCCACCCCC-------ATGCCCCACTCAATCATGAGCC
AAACCGCTCCCATAATGCCTAGCCAAAAC--------------------------------AGTTTGATCTGGAAGAACT
TTCTGCCAACTTCTGATTATTTAACTGTACTACTTGTTATTACTTCTTACAGACTCGTATTCAAACATTGGTTGC-----
AGTTATACAACTCAGAGCATATATACTCGAATGAAAGCACAGCTAATATATGTA-----CTGCACTGCATAATTAATGAA
TCAATTTGCAGACGTAGCAATCAGGAGGAGGAGGAGGAGA---AGGGAGAGTTGCTTGGGCAATTTGGCGAGGTCTTCTT
CCCTTCCCCTGACGTGGGCGGCCATAAAGTCCATTATATTCCTCACAAAGGCAGAGAGA----GCGAACTGGTCCGTGTG
GAGGTGTTCTTGGAAGGTTCTCCCGCGTCAGGGAGTAGTTGGCGCCATCGCCCTTACCTTCTTTAGCTAGCTAGCTAAGC
TAGGACAACCGCCCACGCGCATACACACAC------GAGAAAGAGAAAGGATTCACTCGCGGGAGGAGGAAG-------A
--GATAGGGGGAGAGAGATCGACCGATGGGGGACGACCATGGCGCCAAGCTGGTGAAGAGCCTGCGGGGCGCCGCGCACA
AGTACGTCGGCGTCGGCTTCTTCCTCGGCTTCTTCCTCGTCCTCCTCACCTACTTCACCCTCTCCGAGCAGTTCGCCATC
GCCGCGCCCAACGGTGCGTCTCGTCCGTTCTCTCCGAGCAGTCCCTT---------------------------------
------------------------------------------CTTTATCGGGGCAAGCAAGCATATGTG--ATTCGCCTC
AAAAGCTGCGATTTGGTTAGGCCCAAAGAATTGTTGTGTTAGTATTGTAGT--CCTTTATTTGAACAACTTT--------
--TGAACG----------CAAGACTTGGTCA--GTATGGACATGTTCTTCCATGTTCTTGGTTATCTCAATTTAAGGACA
TAGTCAGAGCACCAGTCACCAACCTGAAACTGAAACTGATGAGAATTTGGCTACAAATTGCAGCTATCCGAAGGACCTCG
GCGGCGCACCCGACGCCGACCGCCCCGGCCGTGGCAGAGAAGACGGTGCAGAAGCAGCAACAGCTCCCCGTCATAAGTAA
GTAAACCAGGTGC----CCGAGCTCCTGATCAACGAAATTCAACCGGAAATTCTTGTTCTTCTGAGTTCTGACCATGTAT
GTGTTGTCTTGTGTTGCATGGAACAGAGGAGGAAGCACCTCTGCCAGAGCATGAGCAAGTACAAGAGAAGCCACCGCCTG
TCGACGAGGAGCCCCACAGGGAAACAGAGGAGCCCAACTCAGAAACAGAGGAGGACCCCAAGCCCAGCGGTACGTAGCTG
CTAACCTCTTCCAAATACATCCATGTCAAGAGAAAAGTCGACAAGTTTCGATTGGAACTCCGGCCAATCAATCCAAAGAA
AGAACTTTTTCTTTTTCGGGGACCAAAGAAAG-----AACTTTGCTCCGTCAGAATTCCACTAAACCTGAACTGAAAGAA
AAAAAATGCTCA-------AGTTTGATGCCT---ATCCATGCAGATGACGCTACCAAGATCGTGACGACGGCGGAGGAGA
GCGCGCCGGCGAAGAAGCCGGCGTGCGACATCCAGGGCCCCTGGGCGTCCGACGTCTGCGACCTCGCCGGCGGCAGCGGC
GGCGTGCGCATCCACGGCTCCACCCACACGGTGCTCGTCCCGCCCACCATCGAGTCCGGCGGCAGCAACCCCAACCCGCA
GGAGTGGCGCGTGCTGCCCTACTCCCGGAAGCACATGTCCGGCATCAAGGAGATCACCGTGCGCGAGCTGCCCTCGGCCG
CCGACGCGCCCCGCTGCGCCGTCACCTCGCAGGTCCCCGCGCTCGTCTTCGCCATGGGCGGCCTCACGGGCAACTACTGG
CACGACTTCAGCGACGTCATGATCCCGCTCTACCTCCAGGCCTCCCGCTTCGACGGCGAGGTGCAGCTCGTGGTCACCAA
CATCCAGCCCTGGTACGCCGGCAAGTACCGCCACATCATCGCGCGCCTGTCGAGGTACGACGTGGTGGACATGGACAAGG
ACGACCAGGTGCGCTGCTTCCCGTCCGCCGTCGTCGGCATCCGCATGCACAAGGAGTTCAGCATCGACCCGGAAAAGGAG
CCCACGGGCCACTCCATGCCGGAGTTCACCAAGTTCCTCCGCAACGTCTTCGCGCTCCCGCGCGCCGCGCCCATGCGGGT
CACCGCCAGACTTATAAGCGACAAGAAGCCGAGGATGATGATCATCTCGCGGCGCCACCCGAGGAAGCTGGTGAACATCG
CGGAGGTGGTGGCGCTCGCCAAGCGGATCGGGTTCGAGGTGGTGATTGGGGACCCGCCGTTCAACGTGGACGTGGGCGAC
TTCGCGCGCGAGGTGAACGCCGCCGACGTGCTCATGGGGGTGCACGGCGCCGGCCTCACCAACTCGCTCTTCCTGCCGAC
TGGGGCCGTGTTCATCCAGGTGAACCCCTTCGGCAAGATGGAGCACATCGGGGAGGTGGACTTCGGGACGCCGGCGGTGG
ACATGGGGCTCAAGTACATGGCCTACTCGTGCGGCATGGAGGAGAGCACGCTGGTGGACACGCTGGGGCGCGACCACCCG
GCCGTCAAGGACCCGGAGTCGATCCACCGCAGCGGGTGGAGCAAGGTGGCGGAGTACTACCTCGGCAAGCAGGACGTGAA
GCTCGACCTCCAGCGGTTCGAGCCCGTGCTCATCAAGGCCATGGCCATGCTCAGAGAGTAGCCGCTCCCTCCGATCCAGC
TTGCAGCCCACACACATTGTGGTAGAGCTGATACGCACTAGCATAGAGCAGTTCCATTTCTTCTAATTTATTCCTATTAA
TTTACATATT--TTTGTGGATGAAC---TGATCAAAAGGTTTATACAGCAAGTATATATGTGTTCCACTGATCCATCGAG
AGAGCAACACGAATCATTGAT----TATAGTGGCATCATCAACAATCTCTCC----------------------------
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>SNPs
SSSS-S-S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------------S-------S----------S-SS--SS
SSSSSSS---S--------------------------SSSSSSSSS-------------------S--------SSSSS-
-------------------S------------------------------------SS----SS-----SSSSSSSSSSS
SSS--------------------------------------S----------------------S------------SSS
SSS-------------------------------------------SSSS-SSSS-------------------------
--SS--------------------------S-----SS-------------S-------------S--------------
------------S----------S--------S--S------------------------S-------------------
---S-------SS--------S---SS---------------------------SSSSS---------------------
---------------------------------------SSS-----S---------------------------S----
------S-------------------------------------S------------S-SSSS-----------------
---------------------------------------------------------------------SSSSS------
------------------------------------------------------------------SS-----S------
SS---------------S--------------------------------------------------------------
-------------S--S---------------------------------------------------------------
--------------------------S-SSSSS---S-----S------SSS---------SS----S---------SS-
-----------------------------------S----S-----------------------S--SSSS---------
---------S----S---S-------------S----S--SS-S--SSS-SSS------S-------S------S-----
---S-SSSSSSSSSSSSS----------------S------------------SSS--SSSS-SSSSSS--SS-SSSSS-
SSSSSSSSSS--SSS---SSSS-SS-SSSS-----------------S----S-----------------S---------
---------------------S----------------------------------------------------------
S-------------------------------S-S----------S---------------S--S--S------------
---S-----------------------------------------------------------------------S----
---------------------------------------------------------------------------SS-S-
S-----------------------S-----------------------------------S-------------------
SSS-------SSS---------------S-----------------------S--------S--SS--------------
-------------------SS--SSSSS--SSSS--S-----------S----S------------S--S----------
----------------------------------------S---------------------------------------
--------------------S--------------------------------------S--------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------S---------
-----------------------------------------S--------------------------------------
---------------------------------------------S-----S-----------S----------------
----------------------SSS---------------------------------------------SS--------
--------------------S--------------------------------------------------S---S----
------------------------------------------------------------------------S-------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------------------------------------S---------------
--------------------------------------------------------------------------------
------------------------S---------------------------------------------------S---
---------SSS-S------------------S---------S-------------------------------------
--------------S-SS-SSS-SSSSS---------S-S------------------------S--------S-----S
-------S--S--S-------SSSS-------S------S---S-S------S-S-SSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_97
-----------------------------------------------------------------------------GCG
GGTAATTGTTGTGGAGC---------------------------------------------------------------
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>reverse_2129
--------------------------------------------------------------------------------
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------------------------------------------------GGCTAGCAAGATCGTGACCA------------
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>forward_2065
--------------------------------------------------------------------------------
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---------------------------------------------TCCGTCACAATTCCACCGAG---------------
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------------------------------------
>reverse_3680
--------------------------------------------------------------------------------
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TAGCTCCGGCAATGCTACA-------------------------------------------------------------
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